Spo26670 (gene) | SpinachBase

Overview


Name	Spo26670
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Low temperature and salt responsive protein family
Location	SpoScf_02579 : 45146 .. 53392 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCTTAAATCATGTGTTTGACTGGCAAACTATTTTTTTTTAAAAAAAGATCTTTTTCTCTCTCTCTTCTACCCTTCCTATTTCATTCGAAGACCCAAAAAGAAAAAGAATGCCCACCATTATTGCCCTGCTCATTGTATTTCAAAAATTAAATTACTTTGATGCCCACACCAAATTGATATCATCATCAAAAGAAAAATGTTTGAAGTCATCAACCAGTACATCATGTCCCTCCCTTTCATTTTCTCTCTCCTCCTTTCCCACCTTTCCTTTCTCTTCATTACAGTGAGTTTGCAGCAACCAATTAACATTAAATTCACCAACTAATTTAACTCGACCAAGAAATTTTTCTAAGCTCCATTGATTACATCTTCAATGGCGGAGTAATAGAGAATAAACAACCAAAATCATAGATTACGACCCGAAATTGATTTCAAAGTTTCCTTAAACCCGATAGCCGTTCATTTGACCCAGATCGGTATTAGAGGTAAGCTTGAAATTGAATCGAGCCAAATCCCTAACGTCACCGCAACAGCAGCACCGCCCGCAGCAGCACCGCTAGCAGCAGCACCAGCAAAAGCCGATCAATTTTGTGCTCACTGTGTGGCTGCGTGAGGAAGGCTAATTATTCATTTTCCTTTTATACAACCTGGGTTGGCCTCTTCTCTCACTTTTACGATGTGGGATGAGTTGATTTCAACTTCTAAATTGAAATTTGACTGCCATAAATTTCTGACCGCCAATTTCGGAGGTTTGGGCGATTTATTGCTCTTTGATTTTAGGCACTGCTCTTGGTTTTAGGTGTTTTGTAATTGAAATTAAATTGCTAAATTATAGGGGTGTTTTAGTCTTTTACGCTGGGGACACCAAAAGCGTAATTACGGAAATAACCCTCCCCTCTTCCATTATGTAATAGAGAAGATACGGTAATTCAGTCCAAAATACCTAACGGGCTATTCATCCATAATTAGAAATGATGCATCAGCCATAATTGGTGTGAAATTACGCATATATTTAATTTAAGGTTGAACATGGGGATAGCCGTTTTTCCTTTTTTTTAAAAAAAACTTTTTTTTTCAATTATCAAGGGAGTTTAGTCTTTTAAAGTGGAGTTACCGAAATGTCCCTCCCCTCTTAGCTTATATAATAGAGATAGATAACAAATAACAAATAATAAATAATAAATAATAAATAATGAATAATGAATAATAAATAATAATTAATAAACAACAATAATTAATAATTAAATAAATTGTTTATTATTATTTATTTATTTATTTATTATTTATTATTTTTCACATATTATTTATTACATATTATTTATTATCTTAAATAGGAGAGAGAAAAGGGAGAAGGATAGACAAATCAAACAACATTCTTAAACAAAAGGGTTTTCATTCCATTCTCCTTGATTCTCATTCTCATTCTCTTTCCCTTTCCCCTTCTCCAACCAAACGGCCCCTTAGTAAGTCAATCCCGGTATCTTGAATAATGTTAGGGAAATTCCCATTAGTACACTCTTATTATTGACTTTTGCCAACGGTACATTCACTTTTAATTGTATTGCAAATAATACACTTAAACTATTAACTTCCTTATTTTCTTGACTTTTTTCATTAAATAGTTTAACCATTGTTAATCATTAGGATTGAAAATTTAAAAATAAAATAACAAATAAAAGTCATATGCCGTAGTTTGATTATCTAGGCAATTAGAATCTATTACACCCAAAAAGAAAAGCCCTGCTCTTTTACATATATCTTTTCTGAATTCAGGTTGTTGTGTTGCATCACTTCCTTGACCCAACTGTTGTCTAATGGCTTTGGTTTTGGTAGGTTAGGTACCAATAATAACATTACTTATGGATCTTGTCTATTAAGACTGATAGGACAAAAGAAATACTTAAGCAATATGGAGTATTATTAAATACAAAGACAAATTAGCCATTAACAACTAATTAGTCCCGCGAATTAGTGTATACTCTACTTTTTATTTAGATTTTTAGATGACAGGGGAGAAGAGAGGAAGAAAAGAGGAATACGAGGTTTTTAGGTCTATGCGTTTATCAAAGTGTTAGGTTTTCTTTGTTTTTTTATTTTTAATTTAAGATTTATTCCTAATAATTAATTATGGTTAAACTATTTAATGAAAAAGTCAAGATAGTAAGGAAGTTAATAGTTAAAGTGTATCATTGACAATATAATTAAAAGCGAGTGTACCATTGGCAAAAGCCAATAATAAGAGTGTACTAATGAGAATTTCCCATAATATTATAATCCAGCTAAAGTTAGTATGTTATAACATAAAATTTTTATTAGCTAGTTAATTATAACATTTTTTTTATAAGTTAGTTTTTCACAAAAACTCAATTTTATAAGGTATTTTTTAATAAATTTGTCTATCTCGAACTATGTATAAGTAAAATTATAAAAAAATAAAATAATAATAAGATTGATAATAGTGGTGCCATGAATGGTTGTGTGTTTATGATAAGGGAGCTCGGATAGCTCTCCTTTAATGGAAGCCAACAACATATTCTAAAAGAAGAATGTGACTCAGAGATAAGAAGAAGAAGAGAATTCAGAATTCAGATGAAAGGAGAGAGAGAGAGAGAGAGAGAGTTTGGGAAGATTTGTATTGTATTATGATGCTAATACAATGTACCCGAATTAGTTTATAAGCTGCCAAAAACAGCTAACTGACTCTCTAACAAACCCCCTAATTTTAAGCAACTTATTCTTCAAGCTAGCTAACAACTTTAACTAACTTTCCCGCCAAAACTTCCAATGATCACATTTGATCATTTGGATTTAAAAACTGAAAATTAAAGAGAATAAAGAGTTCTCCTATAACAATACTTCCCCCTTTAAGAGACTTGTCCTCAAGTCTTAAACTGTGAAAGTAGGAAACTGAGCTTGAAAGGTAGTGGCAGCTTCCCAAGTGGCTTCATGGTCTGCAAATCCAGTCCAGCTGACTAAATATTGATCCTGTGGAACATCATTAATCATCACCACACGTTTGTCAAGTATAGCAGCAGGCTGAATAGGGTTCAAAGAGGGATCAGTGCCAGAAAACCAATCTGGTATGTGAGCTGCAATAGGAAGTGCTCCTTGGAACCTTTTGAGTTGTGATACATGAAAAACATTGTGTATCTTAGCATCTGCAGGCAACTTCAGTTTGTAAGCAACCTTTCCCACAGGAGCTAAGACTTGGAATGGACCATAAAATAGATGAGCCAACTTCTGGTTGGATCTTCTTTGCACAGTTTGTTGTCTGTAAGCTTGTAGCTTAAGCCAGACCCAATCCCCAATTGCAAACACTCTTTCAGACCTATGCTTATCAGCTTGTACTTTCATTCTTTCTTGAGCCTTGGCCAAATGAAACTTGAGAGTAGCTATCATATTTTCTCTCCTCACTAAGCTTCTATCTACTTCAGCATTGCTTGACTCACCAGGCAAGTAAGGCAAGTGAAGTGGGGGAGACTGGTTATACACAACCTCATAGGGTGTGAGCTTGCTGGAAGTGTGAAAATGGGTGTTGTACCACCATTGTGCCAATGGCAACCACATGTGCCAGTCTTTAGGATGTTCACCAGTCATACATCTAAGGTAGTTTTCCACACATCTGTTCACTACTTCTGTCTGGCCATCAGTTTGGGGATGGTATGCACTAGACAACAAGAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAATGCTAGAGGATGTCCATCTTGCATTAACACTGCCCCAATGCCTTTTTGTGATGCATCTGTTTCCACAACAAACTGCTTGTCAAAGTTGGGAATGGCCAAAACAGGAGCAGTTACCAAAGCTGCTTTAAGTTTCTCAAATGCAGCTTGGGCTTGATCATTCCATTGGAATCCACCTTTCTTCAATTGATCAGTTAAGGGTTTGCTAATGACTGCATATCCTTTGACAAATTTCCTGTAATATCCTGCTAAACCCAGGAAGCCCCTTAGTTCCTTAATAGTAGAGGGAACTGGCCAACTTTGTACAGCATTTATCTTGTTTGGATCTGTATGAACACCATCTGCAGCTATATAATGGCCTAGATATTCCACCTTTTCAGTAGCAAATACACATTTGCTTAACTTTGCAAACATATAGTTAGCTTTCATTAACTCAAACACCATTGCCAAATGAGTCCAGTGGTCTTCTAGAGTCCTGCTATACACCAATATGTCATCAAAAAAGACTAAGACACATTTTCTTAAAAGAGGTTTAAATACCTGATTCATCCAGTTCTGGAATGAAGCTGGAGCATTGGTAAGGCCAAATGGCATAACAAGGAACTCATAGTGTCCAGTATGGGTTTTGAAAGCTGTTTTGTATATGTCTGATGGACTAACTCTCATTTGGTGGTAACCAGATCTAAGATCAAGCTTAGAAAACACAGCAGCCCCAGACAATTCATCCAATAGTTCATCAATCACTGGTATAGGGAATTTATTCTTCACGGTTCTATTATTTAGTTCCCTATAATCCACACACAATCTCCATGTACCATCTTTTTTACCAACCAAAACTACTGGAGAGGCAAAGGGTGAAGCACTATTCTGTATTATACCTCTGTCCAGCATTTCTTGTACCAACTGTTCAATGACATCTCTTTGCTTTAGAGGGTACCTGTAAGGTCTAATGTTGACTGGGTTAGCATCTGGAAGCAAAGGTATGGCATGGTCAAACACCCCTCTCAAAGGTGGCAATTCTGAAGGTTCCTCAAATACCATTTGGTAATTGAGTTGAAGTTCTTTCAGCTCTGCAGGAACCTCCACTGAAGAGGTAGGAGTTTCTGAATGCAAATCAGCTTGATTATGAACCTGTATCAGACATAAATGAGCAGCTGTGGCAAACAATTTGGAAGAAGGTTCTCCCTCAACCACTTTTAATCTCTTGCTTGGTATTCCCTTCAACATAACCTGTTTATTCTGAAAGCAAAACTCCATCTGTAAATGCAAAAAATCCCAAGATATAGGACCAAGCAAACTCAGCCATTGTATTCCCAACACCATGTCACAACTACCCAGGGGAATGAGCAATACATCTGCTTCAAATATAATGTCCTGTATGGTCCAAGTGAAATTCTTACATATGTGCTGACAAGCTAAATGGTTGCCATCTGCAACAGTAATGGCTTGAGGTGGTATTGTTTCTAGGGTGCAACCCAACTTCTGTGCTATGTTGAGGTCCACAAAATTGTGTGTACTGCCAGAATCTATCAATATCTGCACAGGTTTGCCTTTCACCATTCCTCTCACCCTCATTGTGCTAAAACCCTGACTGCCAGATAAAGCACTCATAGAAATCTGTGGCTCACTCACCTCTTTATCCCCTAGATCCAACTCATCACTATCACTGAGTTCTTCAATAATATCACCTGGAATCTCTACAGTAAATAACTGTGGTTCCCTAAATTGACACTTGTGATTCCTGTCATATGGAGCATCACAGTAGTAACACAATCCCTTGGCAATCTTTTCTTGCCTGACATCAGCTGGTATGTATTTGAAGTTTTTTGTTCTTTGTTGTGGGTATTTGGTCAAGGATAAGGTGGTATTTGGTTTAATTTGTGGTGTAGGTAAGAGTGGTGGTTTGCTGTTGGTTAGGAGTGGTACAGACTGCAATGGCTTTGGGCTATAAAATGGTTGTTTGTAGGTTGTTTTTGTAGCTACCAGATTCTCCTCCTGTAACCTAGCCAAATCAATGGCTTCAGAAATGGAATCAGGTTTAAAGGCTTTAACAAAAGGTTTAACAGCTGCTTTAAGTCCACCAACAAATCTTTCCAACAAGTAAGTTTCAGGCAAGATATGGTTATTCATCATCATGATTGACCTCAAATTCTCAAATTCATCCACATAATCCTCTAATAAACCAGTTTGCTGCAATTTATTAAAATTTTCAACCACATTTTGTGCTGAACTATCCCTGAATCTAGCATACAAATCGGCCACAAAATCATTCCAATCAACTATTATACTTTTTCTAACTGACAAATAATTCATCACCCAACTCTCAGCCTTATCTGTCATGTTGAGAGAGGCAAGATCCACCTTCTGCTCCTCAGGGATTTTACATAATGAGAAGTACTTGCAGCATTTTTTTACCCAAATTCTAGGGTTGGTGCCATCAAATTTAGGAAAAGTAAGCTTGGGATTCATACCTAGTGTTCTGTTAGGTTGAGATTTTTGAGTCGAGAATGAAGTATCTTCATTGCTAGTTGCTGAATCCTTAAGAGTCTGCATAAACTTCATCATCTCTTCGAATTTTTGCTCCATTTTTTTGTTCTGATCTTCGAGTTTGGAGTTCTGCTCCTCCAACCTCTTTTCTAAATTTTTGAATTGATCCTCCATAGCTGCCTTTCTTCTGGTAGCAGCAGGAGCCAGTTCTAGCTTCAATCAACTGCAGGGAGAGAGTTTTTTAGCAGCGATTGGCTCTGATACCAATGATAAGGGAGCTCGGATAGCTCTCCTTTAATGGAAGCCAACAACAGATTCTAAAAGAAGAATGTGACTCAGAGATAAGAAGAAGAAGAGAATTCAGAATTCAGATGAAAGGAGAGAGAGAGAGAGAGAGAGTTTGGGAAGATTTGTATTGTATTATGATGCTAATACAATGTACCCGAATTAGTTTATAAGCTGCCAAAAACAGCTAACTGACTCTCTAACAAACCCCCTAATTTTAAGCAACTTATTCTTCAAGCTAGCTAACAACTTTAACTAACTTTCCCGCCAAAACTTCCAATGATCACATTTGATCATTTGGATTTAAAAACTGAAAATTAAAGAGAATAAAGAGTTCTCCTATAACAGTTTATGCCACATGAAGTGGAAGTTGGCAAGCTGCAATGCTTAGCATGAACTCGACCAATGATGTTTATTCTGATCTTTATTATATAAAGGAGCGCTTGATACGGTGTCAAAAAATGTAACTACCCGTTATTTGATTATAAAAAATAAAAACATAATTTAATTTTTTAAATTAAAGATACATTCACCTATTTTGCTAACCATAAACAGTTATCGAACTTTTATGAAGTTAGTATATGCAACTCCTTATAGAAGTATTTTGGTACAAAAATTTAACCAGTATTTGATTATAAAAAAATTAAAAAATCGCAATTGGCTAATTAGTTTATGAAATCTTAGAAGGGATATTTAACCATTGATTATAATAGTACGTTTAAAAGAAGGAAAAAGAGAGTACTCATCTTACGATAAGAAATATCAATTTGTTAATGTTGGCTATTTAAAAAACCATAATGGCTAGTAACTATTTAAGCTAATGGTGAAGTGACTTGGTATTAATAAATTTAAAATGAGATAAATAATGTTGCTTGTGTAGTAGTTCTTCTGACAAATTCTTTGATGATTATGATTATGTCTGGAGTACTTGTATATGATTATGTAATTAGTTTGTGCGGCACATATAGCTCTCTCCTAATTAGTCCGTACCTATAAACACCTGAAAGTTTCAACGACTCAATCACCCTCAATTCATAACTTAAATTTAGGTCGATCGATCTCCATCTTTGTGTTGAACGGAAAAGAATGTCGCCGCCGTATTCACGCCCAATACCGACTAGACGTGATGTCGTTATCGCTATCTTACTTCCTCCTCTCAGTGTGTCCTTCAGACATGGTTTCTGCAGCGTAAGTAGTTCATTCATCTACTCTTCTCATCAAAACCTAATAGCTCTTTCTCTATCGTTTTTTGGTTTATAGTTTTCTGGTTTTTATAAAACTAAAAACTAAAATTTAAAAACCACAAAAATAAGTTTCAAGTTTTTAACATGATTATTATGAGTATGATTTTTGTTTTCATAATTCAATTAAATCATATGGATTCATAATAAAAAAAAAACCCTAAAATTGAAAACTGCCGATGATACAGAACGAGTTCCAAGTCAACCTTTTTTTTCAGATTTATTTATTTATTTATTTAAATTGCAGTGTCCATTTTGGGGATGCTGGTTGTTCACGATCTTAGGGTACATCCCTGGAAGTCTTTACGCCATGGCTGACCTATATTTTCATGGTGAGCGTTATTCATGGGCTGTAGATTATCCTGATTTCGATACGGGTCAGGGAATTGAACAACAATAACGAAACGTCAACTTATT

mRNA sequence

ACCTTAAATCATGTGTTTGACTGGCAAACTATTTTTTTTTAAAAAAAGATCTTTTTCTCTCTCTCTTCTACCCTTCCTATTTCATTCGAAGACCCAAAAAGAAAAAGAATGCCCACCATTATTGCCCTGCTCATTGTATTTCAAAAATTAAATTACTTTGATGCCCACACCAAATTGATATCATCATCAAAAGAAAAATGTTTGAAGTCATCAACCAGTACATCATGTCCCTCCCTTTCATTTTCTCTCTCCTCCTTTCCCACCTTTCCTTTCTCTTCATTACAGTGAGTTTGCAGCAACCAATTAACATTAAATTCACCAACTAATTTAACTCGACCAAGAAATTTTTCTAAGCTCCATTGATTACATCTTCAATGGCGGAGTAATAGAGAATAAACAACCAAAATCATAGATTACGACCCGAAATTGATTTCAAAGTTTCCTTAAACCCGATAGCCGTTCATTTGACCCAGATCGGTATTAGAGGTAAGCTTGAAATTGAATCGAGCCAAATCCCTAACGTCACCGCAACAGCAGCACCGCCCGCAGCAGCACCGCTAGCAGCAGCACCAGCAAAAGCCGATCAATTTTGTGCTCACTGTGTGGCTGCGTGAGGAAGGCTAATTATTCATTTTCCTTTTATACAACCTGGGTCGATCGATCTCCATCTTTGTGTTGAACGGAAAAGAATGTCGCCGCCGTATTCACGCCCAATACCGACTAGACGTGATGTCGTTATCGCTATCTTACTTCCTCCTCTCAGTGTGTCCTTCAGACATGGTTTCTGCAGCTGTCCATTTTGGGGATGCTGGTTGTTCACGATCTTAGGGTACATCCCTGGAAGTCTTTACGCCATGGCTGACCTATATTTTCATGGTGAGCGTTATTCATGGGCTGTAGATTATCCTGATTTCGATACGGGTCAGGGAATTGAACAACAATAACGAAACGTCAACTTATT

Coding sequence (CDS)

ATGTCGCCGCCGTATTCACGCCCAATACCGACTAGACGTGATGTCGTTATCGCTATCTTACTTCCTCCTCTCAGTGTGTCCTTCAGACATGGTTTCTGCAGCTGTCCATTTTGGGGATGCTGGTTGTTCACGATCTTAGGGTACATCCCTGGAAGTCTTTACGCCATGGCTGACCTATATTTTCATGGTGAGCGTTATTCATGGGCTGTAGATTATCCTGATTTCGATACGGGTCAGGGAATTGAACAACAATAA

Protein sequence

MSPPYSRPIPTRRDVVIAILLPPLSVSFRHGFCSCPFWGCWLFTILGYIPGSLYAMADLYFHGERYSWAVDYPDFDTGQGIEQQ

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo26670.1	Spo26670.1	mRNA

Homology

[Close]

BLAST of Spo26670.1 vs. NCBI nr
Match: gi|902188975|gb|KNA11270.1| (hypothetical protein SOVF_136680 [Spinacia oleracea])

HSP 1 Score: 68.6 bits (166), Expect = 6.100e-9
Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 1

		  
Query: 14 DVVIAILLPPLSVSFRHGFCSCPFWGCWLFTILGYIPGSLYAM 57
          ++++AILLPPL V FRHG CSC FW C L TILGY+PG +YA+
Sbjct: 9  EILLAILLPPLGVFFRHGCCSCEFWLCVLLTILGYVPGMIYAI 51

[Close]

BLAST of Spo26670.1 vs. NCBI nr
Match: gi|118484931|gb|ABK94331.1| (unknown [Populus trichocarpa])

HSP 1 Score: 68.2 bits (165), Expect = 8.000e-9
Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = 1

		  
Query: 14 DVVIAILLPPLSVSFRHGFCSCPFWGCWLFTILGYIPGSLYAMADLYF 62
          +++IAILLPPL V FRHG CS  FW C L TILGY+PG +YA+  + F
Sbjct: 10 EIIIAILLPPLGVCFRHGCCSVEFWICLLLTILGYVPGIIYALYAIVF 57

[Close]

BLAST of Spo26670.1 vs. NCBI nr
Match: gi|702289763|ref|XP_010047066.1| (PREDICTED: UPF0057 membrane protein At4g30660-like [Eucalyptus grandis])

HSP 1 Score: 67.4 bits (163), Expect = 1.400e-8
Identity = 30/48 (62.50%), Postives = 36/48 (75.00%), Query Frame = 1

		  
Query: 14 DVVIAILLPPLSVSFRHGFCSCPFWGCWLFTILGYIPGSLYAMADLYF 62
          +++IAILLPPL V FRHG CS  FW C L TILGYIPG +YA+  + F
Sbjct: 10 EILIAILLPPLGVCFRHGCCSVEFWICVLLTILGYIPGIIYALYAIVF 57

[Close]

BLAST of Spo26670.1 vs. NCBI nr
Match: gi|703063131|ref|XP_010086890.1| (UPF0057 membrane protein [Morus notabilis])

HSP 1 Score: 67.0 bits (162), Expect = 1.800e-8
Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = 1

		  
Query: 14 DVVIAILLPPLSVSFRHGFCSCPFWGCWLFTILGYIPGSLYAMADLYF 62
          +++IAILLPPL V FRHG CS  FW C L T+LGYIPG +YA+  + F
Sbjct: 10 EILIAILLPPLGVCFRHGCCSVEFWICLLLTLLGYIPGIIYALYAIVF 57

[Close]

BLAST of Spo26670.1 vs. NCBI nr
Match: gi|743807659|ref|XP_011018049.1| (PREDICTED: UPF0057 membrane protein At4g30660-like [Populus euphratica])

HSP 1 Score: 66.6 bits (161), Expect = 2.300e-8
Identity = 29/48 (60.42%), Postives = 35/48 (72.92%), Query Frame = 1

		  
Query: 14 DVVIAILLPPLSVSFRHGFCSCPFWGCWLFTILGYIPGSLYAMADLYF 62
          ++ IAILLPPL V FRHG CS  FW C L TILGY+PG +YA+  + F
Sbjct: 10 EIFIAILLPPLGVCFRHGCCSVEFWICLLLTILGYVPGIIYALYAIVF 57

[Close]

BLAST of Spo26670.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QVJ1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_136680 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.300e-9
Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 1

		  
Query: 14 DVVIAILLPPLSVSFRHGFCSCPFWGCWLFTILGYIPGSLYAM 57
          ++++AILLPPL V FRHG CSC FW C L TILGY+PG +YA+
Sbjct: 9  EILLAILLPPLGVFFRHGCCSCEFWLCVLLTILGYVPGMIYAI 51

[Close]

BLAST of Spo26670.1 vs. UniProtKB/TrEMBL
Match: A9PD78_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 5.600e-9
Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = 1

		  
Query: 14 DVVIAILLPPLSVSFRHGFCSCPFWGCWLFTILGYIPGSLYAMADLYF 62
          +++IAILLPPL V FRHG CS  FW C L TILGY+PG +YA+  + F
Sbjct: 10 EIIIAILLPPLGVCFRHGCCSVEFWICLLLTILGYVPGIIYALYAIVF 57

[Close]

BLAST of Spo26670.1 vs. UniProtKB/TrEMBL
Match: A0A059CLM6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00250 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 9.500e-9
Identity = 30/48 (62.50%), Postives = 36/48 (75.00%), Query Frame = 1

		  
Query: 14 DVVIAILLPPLSVSFRHGFCSCPFWGCWLFTILGYIPGSLYAMADLYF 62
          +++IAILLPPL V FRHG CS  FW C L TILGYIPG +YA+  + F
Sbjct: 10 EILIAILLPPLGVCFRHGCCSVEFWICVLLTILGYIPGIIYALYAIVF 57

[Close]

BLAST of Spo26670.1 vs. UniProtKB/TrEMBL
Match: W9QIZ3_9ROSA (UPF0057 membrane protein OS=Morus notabilis GN=L484_004178 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.200e-8
Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = 1

		  
Query: 14 DVVIAILLPPLSVSFRHGFCSCPFWGCWLFTILGYIPGSLYAMADLYF 62
          +++IAILLPPL V FRHG CS  FW C L T+LGYIPG +YA+  + F
Sbjct: 10 EILIAILLPPLGVCFRHGCCSVEFWICLLLTLLGYIPGIIYALYAIVF 57

[Close]

BLAST of Spo26670.1 vs. UniProtKB/TrEMBL
Match: A0A0B0N6C6_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_35429 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.600e-8
Identity = 28/48 (58.33%), Postives = 36/48 (75.00%), Query Frame = 1

		  
Query: 14 DVVIAILLPPLSVSFRHGFCSCPFWGCWLFTILGYIPGSLYAMADLYF 62
          +++IAIL+PPL V FRHG CS  FW C L TILGY+PG +YA+  + F
Sbjct: 10 ELLIAILIPPLGVCFRHGCCSVEFWICVLLTILGYVPGIIYALYAIVF 57

[Close]

BLAST of Spo26670.1 vs. ExPASy Swiss-Prot
Match: RC24_ARATH (UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana GN=At4g30660 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.000e-8
Identity = 28/54 (51.85%), Postives = 37/54 (68.52%), Query Frame = 1

		  
Query: 14 DVVIAILLPPLSVSFRHGFCSCPFWGCWLFTILGYIPGSLYAMADLYF-HGERY 67
          +++IAILLPPL V FR G C+  F  C + TILGY+PG +YA+  + F H E Y
Sbjct: 10 EIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHREEY 63

[Close]

BLAST of Spo26670.1 vs. ExPASy Swiss-Prot
Match: RC22_ARATH (UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana GN=At2g24040 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.600e-7
Identity = 25/54 (46.30%), Postives = 36/54 (66.67%), Query Frame = 1

		  
Query: 14 DVVIAILLPPLSVSFRHGFCSCPFWGCWLFTILGYIPGSLYAM-ADLYFHGERY 67
          ++ IAILLPP+ V  RHG C+  F+ C + T LGY+PG +YA+ A  + H + Y
Sbjct: 10 EIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHRDEY 63

[Close]

BLAST of Spo26670.1 vs. ExPASy Swiss-Prot
Match: RCI2A_ARATH (Hydrophobic protein RCI2A OS=Arabidopsis thaliana GN=RCI2A PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 4.400e-7
Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 1

		  
Query: 14 DVVIAILLPPLSVSFRHGFCSCPFWGCWLFTILGYIPGSLYAM 57
          D++IAILLPPL V  R G C   FW C + T+LGYIPG +YA+
Sbjct: 8  DIIIAILLPPLGVFLRFG-CGVEFWICLVLTLLGYIPGIIYAI 49

[Close]

BLAST of Spo26670.1 vs. ExPASy Swiss-Prot
Match: RC23_ARATH (UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana GN=At4g30650 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 5.700e-7
Identity = 26/60 (43.33%), Postives = 36/60 (60.00%), Query Frame = 1

		  
Query: 14 DVVIAILLPPLSVSFRHGFCSCPFWGCWLFTILGYIPGSLYAMADLYFHGERYSWAVDYP 73
          +++IAILLPPL V  + G C+  F  C + TILGYIPG +YA+  + F     S  +  P
Sbjct: 10 EILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNREGSTELGAP 69

[Close]

BLAST of Spo26670.1 vs. ExPASy Swiss-Prot
Match: OSR8_ORYSJ (Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica GN=OSR8 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.700e-6
Identity = 23/43 (53.49%), Postives = 31/43 (72.09%), Query Frame = 1

		  
Query: 14 DVVIAILLPPLSVSFRHGFCSCPFWGCWLFTILGYIPGSLYAM 57
          ++++AI+LPPL V  R G CS  F  C L TILGY+PG +YA+
Sbjct: 11 EILLAIILPPLGVFLRFGCCSMEFCICLLLTILGYVPGIIYAV 53

[Close]

BLAST of Spo26670.1 vs. TAIR (Arabidopsis)
Match: AT4G30660.1 (Low temperature and salt responsive protein family)

HSP 1 Score: 58.9 bits (141), Expect = 1.700e-9
Identity = 28/54 (51.85%), Postives = 37/54 (68.52%), Query Frame = 1

		  
Query: 14 DVVIAILLPPLSVSFRHGFCSCPFWGCWLFTILGYIPGSLYAMADLYF-HGERY 67
          +++IAILLPPL V FR G C+  F  C + TILGY+PG +YA+  + F H E Y
Sbjct: 10 EIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHREEY 63

[Close]

BLAST of Spo26670.1 vs. TAIR (Arabidopsis)
Match: AT4G28088.1 (Low temperature and salt responsive protein family)

HSP 1 Score: 55.8 bits (133), Expect = 1.400e-8
Identity = 22/43 (51.16%), Postives = 32/43 (74.42%), Query Frame = 1

		  
Query: 14 DVVIAILLPPLSVSFRHGFCSCPFWGCWLFTILGYIPGSLYAM 57
          +++IAIL+PPL V  RHG C+  F  C + T+LGY+PG +YA+
Sbjct: 10 EIMIAILIPPLGVCLRHGCCTTEFMICLILTLLGYVPGIIYAL 52

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BLAST of Spo26670.1 vs. TAIR (Arabidopsis)
Match: AT2G24040.1 (Low temperature and salt responsive protein family)

HSP 1 Score: 55.8 bits (133), Expect = 1.400e-8
Identity = 25/54 (46.30%), Postives = 36/54 (66.67%), Query Frame = 1

		  
Query: 14 DVVIAILLPPLSVSFRHGFCSCPFWGCWLFTILGYIPGSLYAM-ADLYFHGERY 67
          ++ IAILLPP+ V  RHG C+  F+ C + T LGY+PG +YA+ A  + H + Y
Sbjct: 10 EIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHRDEY 63

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BLAST of Spo26670.1 vs. TAIR (Arabidopsis)
Match: AT3G05880.1 (Low temperature and salt responsive protein family)

HSP 1 Score: 55.1 bits (131), Expect = 2.500e-8
Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 1

		  
Query: 14 DVVIAILLPPLSVSFRHGFCSCPFWGCWLFTILGYIPGSLYAM 57
          D++IAILLPPL V  R G C   FW C + T+LGYIPG +YA+
Sbjct: 8  DIIIAILLPPLGVFLRFG-CGVEFWICLVLTLLGYIPGIIYAI 49

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BLAST of Spo26670.1 vs. TAIR (Arabidopsis)
Match: AT4G30650.1 (Low temperature and salt responsive protein family)

HSP 1 Score: 54.7 bits (130), Expect = 3.200e-8
Identity = 26/60 (43.33%), Postives = 36/60 (60.00%), Query Frame = 1

		  
Query: 14 DVVIAILLPPLSVSFRHGFCSCPFWGCWLFTILGYIPGSLYAMADLYFHGERYSWAVDYP 73
          +++IAILLPPL V  + G C+  F  C + TILGYIPG +YA+  + F     S  +  P
Sbjct: 10 EILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIVFQNREGSTELGAP 69

The following BLAST results are available for this feature:

BLAST of Spo26670.1 vs. NCBI nr
BLAST of Spo26670.1 vs. UniProtKB/TrEMBL
BLAST of Spo26670.1 vs. ExPASy Swiss-Prot
BLAST of Spo26670.1 vs. TAIR (Arabidopsis)

BLAST of Spo26670.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902188975\|gb\|KNA11270.1\|	6.1e-9	65.1	hypothetical protein SOVF_1366...	[more]
gi\|118484931\|gb\|ABK94331.1\|	8.0e-9	60.4	unknown [Populus trichocarpa]	[more]
gi\|702289763\|ref\|XP_010047066.1\|	1.4e-8	62.5	PREDICTED: UPF0057 membrane pr...	[more]
gi\|703063131\|ref\|XP_010086890.1\|	1.8e-8	60.4	UPF0057 membrane protein [Moru...	[more]
gi\|743807659\|ref\|XP_011018049.1\|	2.3e-8	60.4	PREDICTED: UPF0057 membrane pr...	[more]

BLAST of Spo26670.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9QVJ1_SPIOL	4.3e-9	65.1	Uncharacterized protein OS=Spi...	[more]
A9PD78_POPTR	5.6e-9	60.4	Putative uncharacterized prote...	[more]
A0A059CLM6_EUCGR	9.5e-9	62.5	Uncharacterized protein OS=Euc...	[more]
W9QIZ3_9ROSA	1.2e-8	60.4	UPF0057 membrane protein OS=Mo...	[more]
A0A0B0N6C6_GOSAR	3.6e-8	58.3	Uncharacterized protein OS=Gos...	[more]

BLAST of Spo26670.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
RC24_ARATH	3.0e-8	51.8	UPF0057 membrane protein At4g3...	[more]
RC22_ARATH	2.6e-7	46.3	UPF0057 membrane protein At2g2...	[more]
RCI2A_ARATH	4.4e-7	58.1	Hydrophobic protein RCI2A OS=A...	[more]
RC23_ARATH	5.7e-7	43.3	UPF0057 membrane protein At4g3...	[more]
OSR8_ORYSJ	1.7e-6	53.4	Hydrophobic protein OSR8 OS=Or...	[more]

BLAST of Spo26670.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
AT4G30660.1	1.7e-9	51.8	Low temperature and salt respo...	[more]
AT4G28088.1	1.4e-8	51.1	Low temperature and salt respo...	[more]
AT2G24040.1	1.4e-8	46.3	Low temperature and salt respo...	[more]
AT3G05880.1	2.5e-8	58.1	Low temperature and salt respo...	[more]
AT4G30650.1	3.2e-8	43.3	Low temperature and salt respo...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000612	Proteolipid membrane potential modulator	PFAM	PF01679	Pmp3	coord: 15..56 score: 3.0

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042631	cellular response to water deprivation
biological_process	GO:0006333	chromatin assembly or disassembly
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0043531	ADP binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo03699	0.80	Barchart \| Table