Spo26705 (gene)

Overview
NameSpo26705
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr1 : 19668799 .. 19670457 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGCAATAAAGCATAAACACTTAACAGAAAGCCAAGGAATTGAAGAGAATGGGGAGAGTGTCAATCAACCTTGTTTCTATTGCTGTTTTAGCAATAATGTTCCTACTCTGTGCTGCAACAGGTTTTTCTCCCTTCTTTTTGTTCAAATGTGTCGGTCGATTTCACTATTAATTACGTAGTACTACTTACTCTACTAGTGTATATGCGTTGTGAAGTGTAGAAACATAGTCTTCACAAACAACACATGTAAGTGCCCTATATTAATAAAGAACGAAAATGATAAAGGTCGCAACACACGACCTTTCAGCCGTGTCACATTGATGACATATCATGCTTATGTGTCATGATTTAAAGTGGAAACTAAAATATTTAACTTATATATCATACTATACATGTTAAAAAAAAGGTATAATATTAATATTCTAATTTGTTTTCTTCTTTATATCGACTACCTTATTTACATATTTTCTAGTAAAAATATTGTATTGATGGTAAAAATATTATGATTACGCATAGCATACATGACGCTTATATGTACCAATTAAACTCCAACACGTAAGATTATCACCCGATCTTTATCATCATCCAATAAAGAACGAGAGAGTTAATCACTTAATAGCGTTAATGGGCAACTCGATCCCCTTATTGCCATATGGTTTAAGGGGTCTTGTTAAGTTAACTCTACCTCTTGAGTCTTGTTTTAATATTTTCGCCCTCCTTGTTTTAATATTTTCGCCCTTGTTGCTCTTTATTTTTGTAGTGTATCGTAATAGAAGAACACAAACTCATATTTTTATTTTATATATTCATGAACATGCATGCATGGTTGTTCACTTGTATATATATATTTTCTTCAGAAAGTAGTTAATTAATTAATTATATATACACTAATTACAATTAATTCATATGAATGACAAGATGCAGCTCCTGTGCTTGGAAGGGTGGCAACAACTTCTTCTGAAGAAAAGCAATTGCCAGTGCAAGTGGAATATAAACTCATGTTAGAAGAAAGGGCGGCAATAAGGAAGGCCCAACAAGATATATATCAAAACCAGAAAATAAAGATGATGAATTCACTACCAAATAACATTCTTGACGTCTTTGAATCGTCTAAGGAGGAAGCTTTGCAGTGCGTGGGGCAAGGCAGTTACTGTAACTTTGTGTTTGGACCGCAATGTTGTTCTACTGATTTTGCATGTTTACCACCGGGTATTTTTGGTGGTGTTTGTGTGGCTTAAACCAATTCAAGAACAAGTACCTAGCTAGCTAGCTAGCTTAGTGGCTAGCCGGGTAGCTAGAGGTCGGTCAGGTCGGGTCAATTCCAACGTCGTCTAATTTTCAATATTATGTTTGTCTATCATATCGATCGATCCATGTTTACTAGCTTTACAAGTTAGCAGAACTAAACTCGACAATATTCATTATGAATAAGGTCGATAGTTAAGGATCGATGTAATAAAAATTAAGTATGTCAGTATGTGTCATGTGTAGTACTTGCGTTCGTGTGTACTAGTTTGGTTGATGAATGAATAATGATGTATTCCTATATATATGTATGAATTATATGATCGATGACTATGAGACTCAAAGTCATCCGATCCTTTGTGTATACGTATATATTTCTAGCTAATTCAATCACATGCATGCATAACCCTCGT

mRNA sequence

AAAGCAATAAAGCATAAACACTTAACAGAAAGCCAAGGAATTGAAGAGAATGGGGAGAGTGTCAATCAACCTTGTTTCTATTGCTGTTTTAGCAATAATGTTCCTACTCTGTGCTGCAACAGATGCAGCTCCTGTGCTTGGAAGGGTGGCAACAACTTCTTCTGAAGAAAAGCAATTGCCAGTGCAAGTGGAATATAAACTCATGTTAGAAGAAAGGGCGGCAATAAGGAAGGCCCAACAAGATATATATCAAAACCAGAAAATAAAGATGATGAATTCACTACCAAATAACATTCTTGACGTCTTTGAATCGTCTAAGGAGGAAGCTTTGCAGTGCGTGGGGCAAGGCAGTTACTGTAACTTTGTGTTTGGACCGCAATGTTGTTCTACTGATTTTGCATGTTTACCACCGGGTATTTTTGGTGGTGTTTGTGTGGCTTAAACCAATTCAAGAACAAGTACCTAGCTAGCTAGCTAGCTTAGTGGCTAGCCGGGTAGCTAGAGGTCGGTCAGGTCGGGTCAATTCCAACGTCGTCTAATTTTCAATATTATGTTTGTCTATCATATCGATCGATCCATGTTTACTAGCTTTACAAGTTAGCAGAACTAAACTCGACAATATTCATTATGAATAAGGTCGATAGTTAAGGATCGATGTAATAAAAATTAAGTATGTCAGTATGTGTCATGTGTAGTACTTGCGTTCGTGTGTACTAGTTTGGTTGATGAATGAATAATGATGTATTCCTATATATATGTATGAATTATATGATCGATGACTATGAGACTCAAAGTCATCCGATCCTTTGTGTATACGTATATATTTCTAGCTAATTCAATCACATGCATGCATAACCCTCGT

Coding sequence (CDS)

ATGGGGAGAGTGTCAATCAACCTTGTTTCTATTGCTGTTTTAGCAATAATGTTCCTACTCTGTGCTGCAACAGATGCAGCTCCTGTGCTTGGAAGGGTGGCAACAACTTCTTCTGAAGAAAAGCAATTGCCAGTGCAAGTGGAATATAAACTCATGTTAGAAGAAAGGGCGGCAATAAGGAAGGCCCAACAAGATATATATCAAAACCAGAAAATAAAGATGATGAATTCACTACCAAATAACATTCTTGACGTCTTTGAATCGTCTAAGGAGGAAGCTTTGCAGTGCGTGGGGCAAGGCAGTTACTGTAACTTTGTGTTTGGACCGCAATGTTGTTCTACTGATTTTGCATGTTTACCACCGGGTATTTTTGGTGGTGTTTGTGTGGCTTAA

Protein sequence

MGRVSINLVSIAVLAIMFLLCAATDAAPVLGRVATTSSEEKQLPVQVEYKLMLEERAAIRKAQQDIYQNQKIKMMNSLPNNILDVFESSKEEALQCVGQGSYCNFVFGPQCCSTDFACLPPGIFGGVCVA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo26705.1Spo26705.1mRNA


Homology
[Close]
BLAST of Spo26705.1 vs. NCBI nr
Match: gi|902237520|gb|KNA24832.1| (hypothetical protein SOVF_011920 [Spinacia oleracea])

HSP 1 Score: 244.2 bits (622), Expect = 1.300e-61
Identity = 128/130 (98.46%), Postives = 128/130 (98.46%), Query Frame = 1 

		  

Query: 1   MGRVSINLVSIAVLAIMFLLCAATDAAPVLGRVATTSSEEKQLPVQVEYKLMLEERAAIR 60
           MGRVSINLVSIAVLAIMFLLCAAT  APVLGRVATTSSEEKQLPVQVEYKLMLEERAAIR
Sbjct: 1   MGRVSINLVSIAVLAIMFLLCAAT--APVLGRVATTSSEEKQLPVQVEYKLMLEERAAIR 60

Query: 61  KAQQDIYQNQKIKMMNSLPNNILDVFESSKEEALQCVGQGSYCNFVFGPQCCSTDFACLP 120
           KAQQDIYQNQKIKMMNSLPNNILDVFESSKEEALQCVGQGSYCNFVFGPQCCSTDFACLP
Sbjct: 61  KAQQDIYQNQKIKMMNSLPNNILDVFESSKEEALQCVGQGSYCNFVFGPQCCSTDFACLP 120

Query: 121 PGIFGGVCVA 131
           PGIFGGVCVA
Sbjct: 121 PGIFGGVCVA 128
[Close]
BLAST of Spo26705.1 vs. NCBI nr
Match: gi|902201700|gb|KNA14039.1| (hypothetical protein SOVF_111070 [Spinacia oleracea])

HSP 1 Score: 155.6 bits (392), Expect = 5.900e-35
Identity = 85/109 (77.98%), Postives = 90/109 (82.57%), Query Frame = 1 

		  

Query: 26  AAPVLGRVATTSSEEKQLPVQVEYKLMLEERAAIRKAQQDIY----QNQKIKMMNSLPNN 85
           AAPVLG   TTSSEEKQL V   YKLMLEE AAIRKA+QD Y    QNQKIK MNSLPNN
Sbjct: 7   AAPVLG---TTSSEEKQLAVG--YKLMLEEMAAIRKAKQDKYESDGQNQKIKTMNSLPNN 66

Query: 86  ILDVFESSKEEALQCVGQGSYCNFVFGPQCCSTDFACLPPGIFGGVCVA 131
           IL+VFE S+EE+LQCVGQGSYCN VFGP CCST FAC+PPGI GGVCVA
Sbjct: 67  ILNVFELSREESLQCVGQGSYCNNVFGPDCCSTSFACIPPGIVGGVCVA 110
[Close]
BLAST of Spo26705.1 vs. NCBI nr
Match: gi|731358989|ref|XP_010691046.1| (PREDICTED: uncharacterized protein LOC104904484 isoform X3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 122.1 bits (305), Expect = 7.200e-25
Identity = 73/136 (53.68%), Postives = 92/136 (67.65%), Query Frame = 1 

		  

Query: 5   SINLVSIAVLAIMFLLCAATDAAPVLGRVATTSSEEKQLPVQVEYKLMLEERAAIRKAQQ 64
           S+NL+  AV+AI+ LL  +T  APV GR+ TT+SEE Q  V   YK ++EE AA  +   
Sbjct: 5   SVNLLCPAVVAILILL--STTTAPVFGRMVTTNSEEMQA-VSQGYKEVIEELAARVQPNN 64

Query: 65  DIYQ--NQKIKM-MNSLPNNILDVFESSKE-------EALQCVGQGSYCNFVFGPQCCST 124
            IYQ  N+K KM + S P N +DVFE + +       E L+CVG GSYCNFVFGPQCC+ 
Sbjct: 65  HIYQSGNEKTKMTITSRPKNTIDVFEEAVKMHKIATAEGLECVGAGSYCNFVFGPQCCTN 124

Query: 125 DFACLPPGIFGGVCVA 131
           DFAC+PPG+ GGVCVA
Sbjct: 125 DFACVPPGLVGGVCVA 137
[Close]
BLAST of Spo26705.1 vs. NCBI nr
Match: gi|731358987|ref|XP_010691045.1| (PREDICTED: uncharacterized protein LOC104904484 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 120.9 bits (302), Expect = 1.600e-24
Identity = 73/136 (53.68%), Postives = 91/136 (66.91%), Query Frame = 1 

		  

Query: 5   SINLVSIAVLAIMFLLCAATDAAPVLGRVATTSSEEKQLPVQVEYKLMLEERAAIRKAQQ 64
           S+NL+  AV+AI+ LL   T  APV GR+ TT+SEE Q  V   YK ++EE AA  +   
Sbjct: 5   SVNLLCPAVVAILILLSTMT--APVFGRMVTTNSEEMQA-VSQGYKEVIEELAARVQPNN 64

Query: 65  DIYQ--NQKIKM-MNSLPNNILDVFESSKE-------EALQCVGQGSYCNFVFGPQCCST 124
            IYQ  N+K KM + S P N +DVFE + +       E L+CVG GSYCNFVFGPQCC+ 
Sbjct: 65  HIYQSGNEKTKMTITSRPKNTIDVFEEAVKMHKIATAEGLECVGAGSYCNFVFGPQCCTN 124

Query: 125 DFACLPPGIFGGVCVA 131
           DFAC+PPG+ GGVCVA
Sbjct: 125 DFACVPPGLVGGVCVA 137
[Close]
BLAST of Spo26705.1 vs. NCBI nr
Match: gi|731358992|ref|XP_010691047.1| (PREDICTED: uncharacterized protein LOC104904486 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 119.8 bits (299), Expect = 3.600e-24
Identity = 72/140 (51.43%), Postives = 93/140 (66.43%), Query Frame = 1 

		  

Query: 1   MGRVSINLVSIAVLAIMFLLCAATDAAPVLGRVATTSSEEKQLPVQVEYKLMLEERAAIR 60
           MG  S+NL+  AV+AI+ LL  +T  APV GR+ TT+SEE Q  V   YK ++EE AA  
Sbjct: 1   MGSCSVNLICPAVVAILILL--STTTAPVNGRMVTTNSEEMQA-VSQGYKEVIEELAARV 60

Query: 61  KAQQDIYQ--NQKIKM-MNSLPNNILDVFESSKE-------EALQCVGQGSYCNFVFGPQ 120
           +    IYQ  N+K KM + S P N +DVFE + +       E+L+CVG G YCN VFGP+
Sbjct: 61  QQNNHIYQSGNEKTKMTITSRPKNTIDVFEEAVKMHKIATAESLECVGAGRYCNIVFGPR 120

Query: 121 CCSTDFACLPPGIFGGVCVA 131
           CC+ DFAC+PPG+ GGVCVA
Sbjct: 121 CCTNDFACVPPGLVGGVCVA 137
[Close]
BLAST of Spo26705.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S137_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_011920 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 8.800e-62
Identity = 128/130 (98.46%), Postives = 128/130 (98.46%), Query Frame = 1 

		  

Query: 1   MGRVSINLVSIAVLAIMFLLCAATDAAPVLGRVATTSSEEKQLPVQVEYKLMLEERAAIR 60
           MGRVSINLVSIAVLAIMFLLCAAT  APVLGRVATTSSEEKQLPVQVEYKLMLEERAAIR
Sbjct: 1   MGRVSINLVSIAVLAIMFLLCAAT--APVLGRVATTSSEEKQLPVQVEYKLMLEERAAIR 60

Query: 61  KAQQDIYQNQKIKMMNSLPNNILDVFESSKEEALQCVGQGSYCNFVFGPQCCSTDFACLP 120
           KAQQDIYQNQKIKMMNSLPNNILDVFESSKEEALQCVGQGSYCNFVFGPQCCSTDFACLP
Sbjct: 61  KAQQDIYQNQKIKMMNSLPNNILDVFESSKEEALQCVGQGSYCNFVFGPQCCSTDFACLP 120

Query: 121 PGIFGGVCVA 131
           PGIFGGVCVA
Sbjct: 121 PGIFGGVCVA 128
[Close]
BLAST of Spo26705.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R517_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_111070 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 4.100e-35
Identity = 85/109 (77.98%), Postives = 90/109 (82.57%), Query Frame = 1 

		  

Query: 26  AAPVLGRVATTSSEEKQLPVQVEYKLMLEERAAIRKAQQDIY----QNQKIKMMNSLPNN 85
           AAPVLG   TTSSEEKQL V   YKLMLEE AAIRKA+QD Y    QNQKIK MNSLPNN
Sbjct: 7   AAPVLG---TTSSEEKQLAVG--YKLMLEEMAAIRKAKQDKYESDGQNQKIKTMNSLPNN 66

Query: 86  ILDVFESSKEEALQCVGQGSYCNFVFGPQCCSTDFACLPPGIFGGVCVA 131
           IL+VFE S+EE+LQCVGQGSYCN VFGP CCST FAC+PPGI GGVCVA
Sbjct: 67  ILNVFELSREESLQCVGQGSYCNNVFGPDCCSTSFACIPPGIVGGVCVA 110
[Close]
BLAST of Spo26705.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BHY9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g218850 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.500e-24
Identity = 72/140 (51.43%), Postives = 93/140 (66.43%), Query Frame = 1 

		  

Query: 1   MGRVSINLVSIAVLAIMFLLCAATDAAPVLGRVATTSSEEKQLPVQVEYKLMLEERAAIR 60
           MG  S+NL+  AV+AI+ LL  +T  APV GR+ TT+SEE Q  V   YK ++EE AA  
Sbjct: 1   MGSCSVNLICPAVVAILILL--STTTAPVNGRMVTTNSEEMQA-VSQGYKEVIEELAARV 60

Query: 61  KAQQDIYQ--NQKIKM-MNSLPNNILDVFESSKE-------EALQCVGQGSYCNFVFGPQ 120
           +    IYQ  N+K KM + S P N +DVFE + +       E+L+CVG G YCN VFGP+
Sbjct: 61  QQNNHIYQSGNEKTKMTITSRPKNTIDVFEEAVKMHKIATAESLECVGAGRYCNIVFGPR 120

Query: 121 CCSTDFACLPPGIFGGVCVA 131
           CC+ DFAC+PPG+ GGVCVA
Sbjct: 121 CCTNDFACVPPGLVGGVCVA 137
[Close]
BLAST of Spo26705.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RRP7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_041880 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.800e-23
Identity = 69/133 (51.88%), Postives = 91/133 (68.42%), Query Frame = 1 

		  

Query: 1   MGRVSINLVSI-AVLAIMFLLCAATDAAPVLGRVATTSSEEKQLPVQVEYKLMLEERAAI 60
           M RVS NLV + A+LAI F+L  AT    VLG+V TT+SEE ++PV   YK+MLEE A  
Sbjct: 1   MARVSFNLVVVPAILAITFMLSTAT----VLGKV-TTTSEEMEMPVG--YKMMLEEMALA 60

Query: 61  RKAQQDIY-QNQKIKMMNSLPNNILDVF-ESSKEEALQCVGQGSYCNFVFGPQCCSTDFA 120
           RK Q ++Y Q   ++   +    ++DV   SS E+A+QCV  G YCN VFGP+CC+ D+A
Sbjct: 61  RKVQSNMYDQPAAVRRSQAAMKGLMDVLVSSSSEKAMQCVAAGGYCNLVFGPRCCTNDWA 120

Query: 121 CLPPGIFGGVCVA 131
           C+PPG+ GGVCVA
Sbjct: 121 CVPPGLVGGVCVA 126
[Close]
BLAST of Spo26705.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQ27_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_041880 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.600e-23
Identity = 69/133 (51.88%), Postives = 91/133 (68.42%), Query Frame = 1 

		  

Query: 1   MGRVSINLVSI-AVLAIMFLLCAATDAAPVLGRVATTSSEEKQLPVQVEYKLMLEERAAI 60
           M RVS NLV + A+LAI F+L  AT    VLG+V TT+SEE ++PV   YK+MLEE A  
Sbjct: 1   MARVSFNLVVVPAILAITFMLSTAT---VVLGKV-TTTSEEMEMPVG--YKMMLEEMALA 60

Query: 61  RKAQQDIY-QNQKIKMMNSLPNNILDVF-ESSKEEALQCVGQGSYCNFVFGPQCCSTDFA 120
           RK Q ++Y Q   ++   +    ++DV   SS E+A+QCV  G YCN VFGP+CC+ D+A
Sbjct: 61  RKVQSNMYDQPAAVRRSQAAMKGLMDVLVSSSSEKAMQCVAAGGYCNLVFGPRCCTNDWA 120

Query: 121 CLPPGIFGGVCVA 131
           C+PPG+ GGVCVA
Sbjct: 121 CVPPGLVGGVCVA 127
The following BLAST results are available for this feature:
BLAST of Spo26705.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902237520|gb|KNA24832.1|1.3e-6198.4hypothetical protein SOVF_0119... [more]
gi|902201700|gb|KNA14039.1|5.9e-3577.9hypothetical protein SOVF_1110... [more]
gi|731358989|ref|XP_010691046.1|7.2e-2553.6PREDICTED: uncharacterized pro... [more]
gi|731358987|ref|XP_010691045.1|1.6e-2453.6PREDICTED: uncharacterized pro... [more]
gi|731358992|ref|XP_010691047.1|3.6e-2451.4PREDICTED: uncharacterized pro... [more]
back to top
BLAST of Spo26705.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9S137_SPIOL8.8e-6298.4Uncharacterized protein OS=Spi... [more]
A0A0K9R517_SPIOL4.1e-3577.9Uncharacterized protein OS=Spi... [more]
A0A0J8BHY9_BETVU2.5e-2451.4Uncharacterized protein OS=Bet... [more]
A0A0K9RRP7_SPIOL2.8e-2351.8Uncharacterized protein OS=Spi... [more]
A0A0K9RQ27_SPIOL3.6e-2351.8Uncharacterized protein OS=Spi... [more]
back to top
BLAST of Spo26705.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo26705.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response
biological_process GO:0017148 negative regulation of translation
biological_process GO:0008152 metabolic process
molecular_function GO:0030598 rRNA N-glycosylase activity
molecular_function GO:0047672 anthranilate N-benzoyltransferase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo089650.73Barchart | Table
Spo217710.69Barchart | Table