Spo26841 (gene)

Overview
NameSpo26841
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionADP ribosylation factor
LocationSpoScf_09925 : 1101 .. 2166 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCGTCCATTGTGGAGACATTACTTCCAAAACACCCAAGGACTCATCTTTGTGGTTGACAGTAATGATCGTGACCGTGTTGTTGAGGCCAGGGACGAGCTGCATAGAATGTTAAATGAGGTGCTGTTTATTCTCTGGCTCCCGTGGCCTTTATTTTAGCAAAGCAATTCATTTGAATAATTTTTGTGAAGTAATAATGCTGATTATATTAGTCTTTCTCACCCATTTAACTTGTACAGGATGAATTGCGGGATGCAGTATTGTTGGTGTTTGCTAACAAGCAAGATCTTCCAAATGCAATGAATGCTGCTGAGATCACCGATAAGCTTGGCCTCCATTCTCTACGTCAACGTCACTGGTACACTATGCCTCTTTGGTTTCTTCTTTCTTCAGCTGACTTGCATACCCTTCACTCTATTTTTGCTTCTTTAATTCATGTACCTTTCACTATGTTGGCAGATACTGTAATCTGTATTTACTAATCTCTTATATGCTTCTGTATTTACAGGTACATACAGAGCACATGTGCCACCTCTGGTGAAGGGCTTTACGAGGGACTGGACTGGCTTTCAAACAACATCGCTAGCAAGGTGTGTTTCAGCTTTCATTATACATGTCTCTACATATGTATGTGTGTTTGTTCAAATGTTCACTTAGTGGATAAATGTCCACCTCTTTACGCTGTGTTACATTCTGCCACTCACTTGCAATCCCTCCTGCTTCCACCCTGAAGCCGGGGGACGGATGAATGCACTAGAGTCTTTAGCTTTTGAGCCTTGAGGAATTTTCAAGCATATTGATACATTTGATGTGATTGCCTTAAAGCAAATATGTTGACTGCTTCTGTGGCTCACATTTTTTTGGGACCTATGGTATCCTGGAGTGAATTGCTTTTTTTTTTTTCTATAGATGAATTCGTGCTATTTGTTTTACAGTTCTGTATGGAAAGTTACCATCTGNTTTTTTTTTTTTCTATAGATGAATTCGTGCTATTTGTTTTACAGTTCTGTATGGAAAGTTACCATCTGTCTACTTTCTTATAATGTCCTTGTCTTTTCAGGCTTAG

mRNA sequence

ATTCGTCCATTGTGGAGACATTACTTCCAAAACACCCAAGGACTCATCTTTGTGGTTGACAGTAATGATCGTGACCGTGTTGTTGAGGCCAGGGACGAGCTGCATAGAATGTTAAATGAGGATGAATTGCGGGATGCAGTATTGTTGGTGTTTGCTAACAAGCAAGATCTTCCAAATGCAATGAATGCTGCTGAGATCACCGATAAGCTTGGCCTCCATTCTCTACGTCAACGTCACTGGTACATACAGAGCACATGTGCCACCTCTGGTGAAGGGCTTTACGAGGGACTGGACTGGCTTTCAAACAACATCGCTAGCAAGGCTTAG

Coding sequence (CDS)

ATTCGTCCATTGTGGAGACATTACTTCCAAAACACCCAAGGACTCATCTTTGTGGTTGACAGTAATGATCGTGACCGTGTTGTTGAGGCCAGGGACGAGCTGCATAGAATGTTAAATGAGGATGAATTGCGGGATGCAGTATTGTTGGTGTTTGCTAACAAGCAAGATCTTCCAAATGCAATGAATGCTGCTGAGATCACCGATAAGCTTGGCCTCCATTCTCTACGTCAACGTCACTGGTACATACAGAGCACATGTGCCACCTCTGGTGAAGGGCTTTACGAGGGACTGGACTGGCTTTCAAACAACATCGCTAGCAAGGCTTAG

Protein sequence

IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo26841.1Spo26841.1mRNA


Homology
[Close]
BLAST of Spo26841.1 vs. NCBI nr
Match: gi|4324967|gb|AAD17207.1| (ADP-ribosylation factor [Glycine max])

HSP 1 Score: 225.3 bits (573), Expect = 5.000e-56
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1 

		  

Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 71  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 130

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 131 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 178
[Close]
BLAST of Spo26841.1 vs. NCBI nr
Match: gi|470137765|ref|XP_004304633.1| (PREDICTED: ADP-ribosylation factor 1 isoform X1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 225.3 bits (573), Expect = 5.000e-56
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1 

		  

Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181
[Close]
BLAST of Spo26841.1 vs. NCBI nr
Match: gi|357495841|ref|XP_003618209.1| (ADP-ribosylation factor-like protein A1D [Medicago truncatula])

HSP 1 Score: 225.3 bits (573), Expect = 5.000e-56
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1 

		  

Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181
[Close]
BLAST of Spo26841.1 vs. NCBI nr
Match: gi|659085648|ref|XP_008443527.1| (PREDICTED: ADP-ribosylation factor 1-like [Cucumis melo])

HSP 1 Score: 225.3 bits (573), Expect = 5.000e-56
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1 

		  

Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181
[Close]
BLAST of Spo26841.1 vs. NCBI nr
Match: gi|15226521|ref|NP_182239.1| (ADP-ribosylation factor 1 [Arabidopsis thaliana])

HSP 1 Score: 225.3 bits (573), Expect = 5.000e-56
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1 

		  

Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181
[Close]
BLAST of Spo26841.1 vs. UniProtKB/TrEMBL
Match: V4LNK6_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10014797mg PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 3.500e-56
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1 

		  

Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181
[Close]
BLAST of Spo26841.1 vs. UniProtKB/TrEMBL
Match: A0A0A0LD11_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G837590 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 3.500e-56
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1 

		  

Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181
[Close]
BLAST of Spo26841.1 vs. UniProtKB/TrEMBL
Match: Q9ZPJ2_SOYBN (ADP-ribosylation factor (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 3.500e-56
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1 

		  

Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 71  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 130

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 131 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 178
[Close]
BLAST of Spo26841.1 vs. UniProtKB/TrEMBL
Match: A0A161X5M5_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_007082 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 3.500e-56
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1 

		  

Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181
[Close]
BLAST of Spo26841.1 vs. UniProtKB/TrEMBL
Match: A9P9X4_POPTR (ADP-ribosylation factor family protein OS=Populus trichocarpa GN=POPTR_0005s00910g PE=2 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 3.500e-56
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1 

		  

Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181
[Close]
BLAST of Spo26841.1 vs. ExPASy Swiss-Prot
Match: ARF1_ARATH (ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2)

HSP 1 Score: 225.3 bits (573), Expect = 3.100e-58
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1 

		  

Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181
[Close]
BLAST of Spo26841.1 vs. ExPASy Swiss-Prot
Match: ARF_VIGUN (ADP-ribosylation factor OS=Vigna unguiculata GN=ARF PE=2 SV=3)

HSP 1 Score: 223.8 bits (569), Expect = 9.200e-58
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 1 

		  

Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGL+WLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLEWLSNNIASKA 181
[Close]
BLAST of Spo26841.1 vs. ExPASy Swiss-Prot
Match: ARF1_ORYSJ (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=3)

HSP 1 Score: 223.8 bits (569), Expect = 9.200e-58
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 1 

		  

Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDR+RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181
[Close]
BLAST of Spo26841.1 vs. ExPASy Swiss-Prot
Match: ARF2B_ARATH (ADP-ribosylation factor 2-B OS=Arabidopsis thaliana GN=ARF2-B PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 9.200e-58
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 1 

		  

Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA KA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGKA 181
[Close]
BLAST of Spo26841.1 vs. ExPASy Swiss-Prot
Match: ARF2A_ARATH (ADP-ribosylation factor 2-A OS=Arabidopsis thaliana GN=ARF2-A PE=2 SV=2)

HSP 1 Score: 223.8 bits (569), Expect = 9.200e-58
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 1 

		  

Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA KA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGKA 181
[Close]
BLAST of Spo26841.1 vs. TAIR (Arabidopsis)
Match: AT2G47170.1 (Ras-related small GTP-binding family protein)

HSP 1 Score: 225.3 bits (573), Expect = 1.800e-59
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1 

		  

Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181
[Close]
BLAST of Spo26841.1 vs. TAIR (Arabidopsis)
Match: AT1G10630.1 (ADP-ribosylation factor A1F)

HSP 1 Score: 225.3 bits (573), Expect = 1.800e-59
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1 

		  

Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181
[Close]
BLAST of Spo26841.1 vs. TAIR (Arabidopsis)
Match: AT3G62290.1 (ADP-ribosylation factor A1E)

HSP 1 Score: 224.2 bits (570), Expect = 3.900e-59
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 1 

		  

Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA+KA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181
[Close]
BLAST of Spo26841.1 vs. TAIR (Arabidopsis)
Match: AT1G23490.1 (ADP-ribosylation factor 1)

HSP 1 Score: 223.8 bits (569), Expect = 5.200e-59
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 1 

		  

Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA KA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGKA 181
[Close]
BLAST of Spo26841.1 vs. TAIR (Arabidopsis)
Match: AT1G70490.1 (Ras-related small GTP-binding family protein)

HSP 1 Score: 223.8 bits (569), Expect = 5.200e-59
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 1 

		  

Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA KA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGKA 181
The following BLAST results are available for this feature:
BLAST of Spo26841.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|4324967|gb|AAD17207.1|5.0e-56100.ADP-ribosylation factor [Glyci... [more]
gi|470137765|ref|XP_004304633.1|5.0e-56100.PREDICTED: ADP-ribosylation fa... [more]
gi|357495841|ref|XP_003618209.1|5.0e-56100.ADP-ribosylation factor-like p... [more]
gi|659085648|ref|XP_008443527.1|5.0e-56100.PREDICTED: ADP-ribosylation fa... [more]
gi|15226521|ref|NP_182239.1|5.0e-56100.ADP-ribosylation factor 1 [Ara... [more]
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BLAST of Spo26841.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
V4LNK6_EUTSA3.5e-56100.Uncharacterized protein OS=Eut... [more]
A0A0A0LD11_CUCSA3.5e-56100.Uncharacterized protein OS=Cuc... [more]
Q9ZPJ2_SOYBN3.5e-56100.ADP-ribosylation factor (Fragm... [more]
A0A161X5M5_DAUCA3.5e-56100.Uncharacterized protein OS=Dau... [more]
A9P9X4_POPTR3.5e-56100.ADP-ribosylation factor family... [more]
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BLAST of Spo26841.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ARF1_ARATH3.1e-58100.ADP-ribosylation factor 1 OS=A... [more]
ARF_VIGUN9.2e-5899.0ADP-ribosylation factor OS=Vig... [more]
ARF1_ORYSJ9.2e-5899.0ADP-ribosylation factor 1 OS=O... [more]
ARF2B_ARATH9.2e-5899.0ADP-ribosylation factor 2-B OS... [more]
ARF2A_ARATH9.2e-5899.0ADP-ribosylation factor 2-A OS... [more]
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BLAST of Spo26841.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT2G47170.11.8e-59100.Ras-related small GTP-binding ... [more]
AT1G10630.11.8e-59100.ADP-ribosylation factor A1F[more]
AT3G62290.13.9e-5999.0ADP-ribosylation factor A1E[more]
AT1G23490.15.2e-5999.0ADP-ribosylation factor 1[more]
AT1G70490.15.2e-5999.0Ras-related small GTP-binding ... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 1..26
score: 1.8E-6coord: 46..67
score: 1.
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 1..104
score: 4.0
IPR024156Small GTPase superfamily, ARF typePROFILEPS51417ARFcoord: 1..104
score: 13
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..106
score: 3.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..105
score: 5.35
NoneNo IPR availablePANTHERPTHR11711ADP RIBOSYLATION FACTOR-RELATEDcoord: 1..107
score: 1.3
NoneNo IPR availablePANTHERPTHR11711:SF181ADP-RIBOSYLATION FACTOR A1Fcoord: 1..107
score: 1.3
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..108
score: 7.4

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006499 N-terminal protein myristoylation
biological_process GO:0006289 nucleotide-excision repair
biological_process GO:0006833 water transport
biological_process GO:0071918 urea transmembrane transport
biological_process GO:0006950 response to stress
biological_process GO:0055085 transmembrane transport
biological_process GO:0006886 intracellular protein transport
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0015031 protein transport
biological_process GO:0046686 response to cadmium ion
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009536 plastid
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
cellular_component GO:0005768 endosome
cellular_component GO:0005798 Golgi-associated vesicle
molecular_function GO:0005515 protein binding
molecular_function GO:0003684 damaged DNA binding
molecular_function GO:0016004 phospholipase activator activity
molecular_function GO:0022857 transmembrane transporter activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0005507 copper ion binding
molecular_function GO:0015204 urea transmembrane transporter activity
molecular_function GO:0015250 water channel activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo098450.93Barchart | Table
Spo241080.69Barchart | Table
Spo044570.68Barchart | Table
Spo132280.67Barchart | Table
Spo063920.66Barchart | Table