Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCGTTAGAAAAATGACAATGATGACACGTGGAAAGCGTTGATGGCCGGTGCATATCAAACAATCAAAAACTACAAACGGCCATCAACCTTTGTTCATAAATCACAAACGCAAAGGGCCACAATAAGTGCTCCCAAATTTCAGTTTTCTTCGACCTTTCATCAACACCCTAATTCCTAAGGTACTACTCCACTTTGAGCTATTGTTTTTCTCTTACTTGTTTATGTATACTTTTATTGCAATTTACACTATTCAATTTCTTTAGCAAAGTGTTTTTTTATTATTATTATTATTATTAATGTTTAAATGGGTAGTTTAATCGATTTGGGGTTGAAATTGGGTTCTAAATTGGGTTCTAAATTGGGTTCTGCTAAATCTTTGCAATATGAGTTTTAGATTCTTGTAAATTATTGATTGCCTATATTTGTTGTTCATCAATTTTAATTTTACACTTTGTTAAGTTGAAAGATGATCTAATTTGTAATTGGGTAAGTCTAAATCATTGATCAGCTAGGACCTTATCCGAATTTGTGGTTCACATGTGGTATATCAATTTTGCCTTTTTCGGCTTAATGATTGTAATCTCAGTCTCTAATTATTAAGATCTAACCCACTAAACATCACGTGAGTATCCACATGGATAGAAGAAGAGAAGTGTTCGCTTAATAATATGACAAAGGGTTACTTCCTGTTGCCATATGGTTTTATAATATGGTTTTAAAATGGAACTTCTTTTGATATTATGAAGTGGACTCTCTCTTATGGGTGCGGCTTAGGTCCATATTTGACATTAATGGTCTTCACTACTTTAATTTGTGGAATTCTTAGCTTAGCCAAGAAATTTATGGTATTAAGGCTACATTTTCGACTTCTTGGCACTTCATTTCAGACATTTATTGCACATCAAGACAACCATTTTTAGTTGTTAGAATATGCCTTGAATCGGTTAAGTTCCCTTCCAAATAACCCAAACACGGGTATCTCACTTTACGATATCTGTTATTTTGGACTAGCTTTATCTATTTGGGCCTATTATTCGGGTCTTTTCCGTATCTGTCCAAAGAGTATTACATAAACTCTTTAGTTCATAACCTAGTTGTATTTTGTAATTTGTACTCTTCAAGATCAATAAAAAAATTGCTCTCCATCTGCTTGTGGATGTAGCTAACACATCGTTAGTGAATCACGTTAAATCTTTGTATTCTTTATTTGTGTTCTTAATTATCTTTCTTACTTCTGTTATAACATTAGTTTATTACCCCATTTTATTTTGGATCTTGATGTGCAATACGTAGTACATAGTATATGCCATATGGGGTATAAATAAAGGGGGAATGAATTCTTACAACTAGATCATTGAGATAGAGGAGGTTGAAAATTGCAATTTACTTCCAAATTTGGCTCTCTGGCATTCTAATCTTGAAATTCATGGCCGGTGAAGTCTTTGTAGATGGCAAGCTTTTATCTCCGAGGCCCGGCTACTCTTAGAAACTTTTCCCTGTCTGCTTCGTCTAATGGTATCTGGCTCCCCCTATTCTCATTTCTCACACAGTGACACTCTCCTTGGTTTACTGGTTTTTCTTTTCTGGTAATGATGTAAATGATGATTGCTGGTTGCAGGAGCTCCTTCAACGACTCAGCAAATTGGGCCAGTGGTCTTGGAACTCCCCCTCAACAAGATACGGAGACCACTAATGCGTACAAGAGCAAATGATCAGCATAAAGTCCATGAACTCATGGATAGCATTAAGGAGATTGGTCTTCAAGTCCCTGTAAGTACTCCATATTCCAGACTAAATAACATCCAATATGGGATAATTCATTACATTATGAGTTTCGGCACTGAATAATTTTACTGTAAGAAACTAAGAACCTTTCCCCTTCCTTGCTCTCTGTGACACAGTCGACTGAAAAGTGCACTTGAGAGTTGAGCCTGCATCTGTTTCAGTAACAGCTTTCCCTAGACAGTGAAAGATATGAGAGCAAACGTTGCATAAGAATGCAGAATGTTTAAATCTTTGATATGACGAATTTGAATGATTAATTTGATGCATCGCGAAATAGAGGGAGCTTAAGAGTGAAATATATTCTGTGATTTAGTGTTTGGTTCTACTGATTCGGTTTTCTGGACATCATTTTTTCACTGTTTACGTAAGTGAATTTTATCTGTCTTAAAATTTTGCAGATTGATGTTCTGGAGGTCGATGGGGTGTACTATGGTAAGTCAGTAGCAAGTGCTTTGGCTTGACTTCTGCTCCTTATATGTTACTAATGAGATTGTACTTTACATTTTCTGGTATAATTTGTTAAAGATATCATTGTTTTATAAGTAGGACTGTAATTTTTTTTGTTTAACCACAGGTTTCTCTGGTTGCCACCGATATGAGGCTCATGAACAGTTAGGTCTCCCAACAATTCGCTGCAAAATCAGGCGTGGAACAAAGGAAACGTTAAGGTTACCCTTGAGTACATCTTCTGATTTAGTTGTTTTATGCCATTTTTATTCTGAAAATTTCTGCAAGAGATTTTGAAACTGTTTCAAATTTATCTTGCAGGCATCATCTCCGATAAATACATTGAAGTAATTTGTATGTTGTAGGCAGATATTTCATGTATGTTGCTTTGCACTTGTAATTTGTATTTTTCCAGTGCTCTCCCTAATGCTAGCATTCTGGTCTTCCTGGACTACTTGTATAAAACTCAAGAACTGTTGTAGCAGTATTTATCCCTTCTCAAATCACAACTGTCATGTATATTATGATTTTGTTGCATTATGTATAATAAGAAATTGGCAGAGTTGCATATTTTTCCCTGTTTCCTGTTACTTCAAATTATGTATGCACTTATCCAGACTGCAATTAAAATGCAAGAAATCTGCAACCACCCTCC CTCGTTAGAAAAATGACAATGATGACACGTGGAAAGCGTTGATGGCCGGTGCATATCAAACAATCAAAAACTACAAACGGCCATCAACCTTTGTTCATAAATCACAAACGCAAAGGGCCACAATAAGTGCTCCCAAATTTCAGTTTTCTTCGACCTTTCATCAACACCCTAATTCCTAAGTCTTTGTAGATGGCAAGCTTTTATCTCCGAGGCCCGGCTACTCTTAGAAACTTTTCCCTGTCTGCTTCGTCTAATGGAGCTCCTTCAACGACTCAGCAAATTGGGCCAGTGGTCTTGGAACTCCCCCTCAACAAGATACGGAGACCACTAATGCGTACAAGAGCAAATGATCAGCATAAAGTCCATGAACTCATGGATAGCATTAAGGAGATTGGTCTTCAAGTCCCTATTGATGTTCTGGAGGTCGATGGGGTGTACTATGGTTTCTCTGGTTGCCACCGATATGAGGCTCATGAACAGTTAGGTCTCCCAACAATTCGCTGCAAAATCAGGCGTGGAACAAAGGAAACGTTAAGGCATCATCTCCGATAAATACATTGAAGTAATTTGTATGTTGTAGGCAGATATTTCATGTATGTTGCTTTGCACTTGTAATTTGTATTTTTCCAGTGCTCTCCCTAATGCTAGCATTCTGGTCTTCCTGGACTACTTGTATAAAACTCAAGAACTGTTGTAGCAGTATTTATCCCTTCTCAAATCACAACTGTCATGTATATTATGATTTTGTTGCATTATGTATAATAAGAAATTGGCAGAGTTGCATATTTTTCCCTGTTTCCTGTTACTTCAAATTATGTATGCACTTATCCAGACTGCAATTAAAATGCAAGAAATCTGCAACCACCCTCC ATGGCAAGCTTTTATCTCCGAGGCCCGGCTACTCTTAGAAACTTTTCCCTGTCTGCTTCGTCTAATGGAGCTCCTTCAACGACTCAGCAAATTGGGCCAGTGGTCTTGGAACTCCCCCTCAACAAGATACGGAGACCACTAATGCGTACAAGAGCAAATGATCAGCATAAAGTCCATGAACTCATGGATAGCATTAAGGAGATTGGTCTTCAAGTCCCTATTGATGTTCTGGAGGTCGATGGGGTGTACTATGGTTTCTCTGGTTGCCACCGATATGAGGCTCATGAACAGTTAGGTCTCCCAACAATTCGCTGCAAAATCAGGCGTGGAACAAAGGAAACGTTAAGGCATCATCTCCGATAA MASFYLRGPATLRNFSLSASSNGAPSTTQQIGPVVLELPLNKIRRPLMRTRANDQHKVHELMDSIKEIGLQVPIDVLEVDGVYYGFSGCHRYEAHEQLGLPTIRCKIRRGTKETLRHHLR Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo26887.1 vs. NCBI nr
Match: gi|902230370|gb|KNA21839.1| (hypothetical protein SOVF_039480 [Spinacia oleracea]) HSP 1 Score: 246.5 bits (628), Expect = 2.300e-62 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1
BLAST of Spo26887.1 vs. NCBI nr
Match: gi|731331322|ref|XP_010676604.1| (PREDICTED: sulfiredoxin, chloroplastic/mitochondrial [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 218.8 bits (556), Expect = 5.200e-54 Identity = 104/120 (86.67%), Postives = 114/120 (95.00%), Query Frame = 1
BLAST of Spo26887.1 vs. NCBI nr
Match: gi|743856495|ref|XP_011029924.1| (PREDICTED: sulfiredoxin, chloroplastic/mitochondrial [Populus euphratica]) HSP 1 Score: 198.0 bits (502), Expect = 9.500e-48 Identity = 103/125 (82.40%), Postives = 112/125 (89.60%), Query Frame = 1
BLAST of Spo26887.1 vs. NCBI nr
Match: gi|698536297|ref|XP_009764466.1| (PREDICTED: sulfiredoxin, chloroplastic/mitochondrial [Nicotiana sylvestris]) HSP 1 Score: 193.7 bits (491), Expect = 1.800e-46 Identity = 97/123 (78.86%), Postives = 109/123 (88.62%), Query Frame = 1
BLAST of Spo26887.1 vs. NCBI nr
Match: gi|1009109595|ref|XP_015891003.1| (PREDICTED: sulfiredoxin, chloroplastic/mitochondrial [Ziziphus jujuba]) HSP 1 Score: 193.4 bits (490), Expect = 2.400e-46 Identity = 97/126 (76.98%), Postives = 105/126 (83.33%), Query Frame = 1
BLAST of Spo26887.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RSE7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_039480 PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 1.600e-62 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1
BLAST of Spo26887.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F8E3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g101490 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 3.600e-54 Identity = 104/120 (86.67%), Postives = 114/120 (95.00%), Query Frame = 1
BLAST of Spo26887.1 vs. UniProtKB/TrEMBL
Match: I1NDB9_SOYBN (Sulfiredoxin OS=Glycine max PE=3 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 7.400e-47 Identity = 101/128 (78.91%), Postives = 112/128 (87.50%), Query Frame = 1
BLAST of Spo26887.1 vs. UniProtKB/TrEMBL
Match: C6T4A5_SOYBN (Sulfiredoxin OS=Glycine max PE=2 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 2.100e-46 Identity = 100/128 (78.12%), Postives = 111/128 (86.72%), Query Frame = 1
BLAST of Spo26887.1 vs. UniProtKB/TrEMBL
Match: A0A061DW27_THECC (Sulfiredoxin isoform 2 OS=Theobroma cacao GN=TCM_006053 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 2.100e-46 Identity = 97/123 (78.86%), Postives = 110/123 (89.43%), Query Frame = 1
BLAST of Spo26887.1 vs. ExPASy Swiss-Prot
Match: SRX_ARATH (Sulfiredoxin, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SRX PE=1 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 2.400e-46 Identity = 90/125 (72.00%), Postives = 110/125 (88.00%), Query Frame = 1
BLAST of Spo26887.1 vs. ExPASy Swiss-Prot
Match: LVSE_DICDI (BEACH domain-containing protein lvsE OS=Dictyostelium discoideum GN=lvsE PE=3 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.500e-8 Identity = 37/89 (41.57%), Postives = 53/89 (59.55%), Query Frame = 1
BLAST of Spo26887.1 vs. ExPASy Swiss-Prot
Match: SRX_DROME (Putative sulfiredoxin OS=Drosophila melanogaster GN=CG6762 PE=2 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 5.700e-8 Identity = 32/90 (35.56%), Postives = 53/90 (58.89%), Query Frame = 1
BLAST of Spo26887.1 vs. TAIR (Arabidopsis)
Match: AT1G31170.4 (sulfiredoxin) HSP 1 Score: 176.8 bits (447), Expect = 8.000e-45 Identity = 86/121 (71.07%), Postives = 106/121 (87.60%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo26887.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo26887.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo26887.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 3
BLAST of Spo26887.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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