Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAACATGATGAACAGCCACCAATCAGAGAACGCCACGTACTGCGCAAACGGTTGCGGATTTTTCGGCACGGCGGCAACGAAGAACATGTGCTCAAAGTGTTACCGCGACCACCACCTCAAAGACGAACAATCCTCCACCATGAGAGCCGCCGTAAAGAAGTCGTTATCCTCCTCACAGTCCGATGAAGCGGTGGCTGTGAGGGAGGCGGTGGAAGAACAATCCGCTACCGTGCGAGCCGCGGTTGATAAATCGTTGTCCTCACCAGTCGTTGAGAAGAAGAAGTCCGTAGAACCGTCGGCGGTTGTGACGGCGGTGGAGGAGGTGAGGCGTTCGAGGAAGGCTGCGAATAGGTGTGGGAGCTGTAAGAAGAAGGTTGGATTGGTGGGGTTTAACTGTAAATGTGGGACAACTTTCTGTGGGTCCCATAGGTACCCCGAAGAACACAAGTGTACGTATGATTACAAGGTTGCCGGAAAAGAAGCCATTGCTAAAGCTAATCCTCTTGTTGTAGCTGAAAAGTTGCAGAGACTCTGA ATGGAGAACATGATGAACAGCCACCAATCAGAGAACGCCACGTACTGCGCAAACGGTTGCGGATTTTTCGGCACGGCGGCAACGAAGAACATGTGCTCAAAGTGTTACCGCGACCACCACCTCAAAGACGAACAATCCTCCACCATGAGAGCCGCCGTAAAGAAGTCGTTATCCTCCTCACAGTCCGATGAAGCGGTGGCTGTGAGGGAGGCGGTGGAAGAACAATCCGCTACCGTGCGAGCCGCGGTTGATAAATCGTTGTCCTCACCAGTCGTTGAGAAGAAGAAGTCCGTAGAACCGTCGGCGGTTGTGACGGCGGTGGAGGAGGTGAGGCGTTCGAGGAAGGCTGCGAATAGGTGTGGGAGCTGTAAGAAGAAGGTTGGATTGGTGGGGTTTAACTGTAAATGTGGGACAACTTTCTGTGGGTCCCATAGGTACCCCGAAGAACACAAGTGTACGTATGATTACAAGGTTGCCGGAAAAGAAGCCATTGCTAAAGCTAATCCTCTTGTTGTAGCTGAAAAGTTGCAGAGACTCTGA ATGGAGAACATGATGAACAGCCACCAATCAGAGAACGCCACGTACTGCGCAAACGGTTGCGGATTTTTCGGCACGGCGGCAACGAAGAACATGTGCTCAAAGTGTTACCGCGACCACCACCTCAAAGACGAACAATCCTCCACCATGAGAGCCGCCGTAAAGAAGTCGTTATCCTCCTCACAGTCCGATGAAGCGGTGGCTGTGAGGGAGGCGGTGGAAGAACAATCCGCTACCGTGCGAGCCGCGGTTGATAAATCGTTGTCCTCACCAGTCGTTGAGAAGAAGAAGTCCGTAGAACCGTCGGCGGTTGTGACGGCGGTGGAGGAGGTGAGGCGTTCGAGGAAGGCTGCGAATAGGTGTGGGAGCTGTAAGAAGAAGGTTGGATTGGTGGGGTTTAACTGTAAATGTGGGACAACTTTCTGTGGGTCCCATAGGTACCCCGAAGAACACAAGTGTACGTATGATTACAAGGTTGCCGGAAAAGAAGCCATTGCTAAAGCTAATCCTCTTGTTGTAGCTGAAAAGTTGCAGAGACTCTGA MENMMNSHQSENATYCANGCGFFGTAATKNMCSKCYRDHHLKDEQSSTMRAAVKKSLSSSQSDEAVAVREAVEEQSATVRAAVDKSLSSPVVEKKKSVEPSAVVTAVEEVRRSRKAANRCGSCKKKVGLVGFNCKCGTTFCGSHRYPEEHKCTYDYKVAGKEAIAKANPLVVAEKLQRL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo26955.1 vs. NCBI nr
Match: gi|902193324|gb|KNA12273.1| (hypothetical protein SOVF_127450 [Spinacia oleracea]) HSP 1 Score: 342.0 bits (876), Expect = 6.100e-91 Identity = 177/179 (98.88%), Postives = 177/179 (98.88%), Query Frame = 1
BLAST of Spo26955.1 vs. NCBI nr
Match: gi|1009169688|ref|XP_015865800.1| (PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 1 [Ziziphus jujuba]) HSP 1 Score: 167.9 bits (424), Expect = 1.600e-38 Identity = 91/182 (50.00%), Postives = 117/182 (64.29%), Query Frame = 1
BLAST of Spo26955.1 vs. NCBI nr
Match: gi|731331385|ref|XP_010676634.1| (PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 7-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 166.0 bits (419), Expect = 6.000e-38 Identity = 94/179 (52.51%), Postives = 114/179 (63.69%), Query Frame = 1
BLAST of Spo26955.1 vs. NCBI nr
Match: gi|976920339|gb|KVI05070.1| (Zinc finger, A20-type [Cynara cardunculus var. scolymus]) HSP 1 Score: 163.7 bits (413), Expect = 3.000e-37 Identity = 85/175 (48.57%), Postives = 115/175 (65.71%), Query Frame = 1
BLAST of Spo26955.1 vs. NCBI nr
Match: gi|728841408|gb|KHG20851.1| (Zinc finger A20 and AN1 domain-containing stress-associated 7 -like protein [Gossypium arboreum]) HSP 1 Score: 158.7 bits (400), Expect = 9.600e-36 Identity = 88/185 (47.57%), Postives = 123/185 (66.49%), Query Frame = 1
BLAST of Spo26955.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R001_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_127450 PE=4 SV=1) HSP 1 Score: 342.0 bits (876), Expect = 4.300e-91 Identity = 177/179 (98.88%), Postives = 177/179 (98.88%), Query Frame = 1
BLAST of Spo26955.1 vs. UniProtKB/TrEMBL
Match: A0A118K2Y0_CYNCS (Zinc finger, A20-type OS=Cynara cardunculus var. scolymus GN=Ccrd_016588 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 2.100e-37 Identity = 85/175 (48.57%), Postives = 115/175 (65.71%), Query Frame = 1
BLAST of Spo26955.1 vs. UniProtKB/TrEMBL
Match: A0A0B0PC02_GOSAR (Zinc finger A20 and AN1 domain-containing stress-associated 7-like protein OS=Gossypium arboreum GN=F383_02707 PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 6.700e-36 Identity = 88/185 (47.57%), Postives = 123/185 (66.49%), Query Frame = 1
BLAST of Spo26955.1 vs. UniProtKB/TrEMBL
Match: A0A118K5U5_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_011984 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 7.400e-35 Identity = 86/188 (45.74%), Postives = 111/188 (59.04%), Query Frame = 1
BLAST of Spo26955.1 vs. UniProtKB/TrEMBL
Match: B9MST8_GOSHI (DNA binding/zinc ion binding protein OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.300e-34 Identity = 88/182 (48.35%), Postives = 119/182 (65.38%), Query Frame = 1
BLAST of Spo26955.1 vs. ExPASy Swiss-Prot
Match: SAP7_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana GN=SAP7 PE=1 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.300e-32 Identity = 81/181 (44.75%), Postives = 111/181 (61.33%), Query Frame = 1
BLAST of Spo26955.1 vs. ExPASy Swiss-Prot
Match: SAP4_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana GN=SAP4 PE=1 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 6.400e-32 Identity = 76/169 (44.97%), Postives = 102/169 (60.36%), Query Frame = 1
BLAST of Spo26955.1 vs. ExPASy Swiss-Prot
Match: SAP6_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2) HSP 1 Score: 131.0 bits (328), Expect = 1.300e-29 Identity = 76/170 (44.71%), Postives = 107/170 (62.94%), Query Frame = 1
BLAST of Spo26955.1 vs. ExPASy Swiss-Prot
Match: SAP1_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Arabidopsis thaliana GN=SAP1 PE=1 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 3.900e-29 Identity = 73/182 (40.11%), Postives = 108/182 (59.34%), Query Frame = 1
BLAST of Spo26955.1 vs. ExPASy Swiss-Prot
Match: SAP3_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Oryza sativa subsp. japonica GN=SAP3 PE=2 SV=2) HSP 1 Score: 128.3 bits (321), Expect = 8.700e-29 Identity = 75/175 (42.86%), Postives = 105/175 (60.00%), Query Frame = 1
BLAST of Spo26955.1 vs. TAIR (Arabidopsis)
Match: AT4G12040.1 (A20/AN1-like zinc finger family protein) HSP 1 Score: 141.0 bits (354), Expect = 7.300e-34 Identity = 81/181 (44.75%), Postives = 111/181 (61.33%), Query Frame = 1
BLAST of Spo26955.1 vs. TAIR (Arabidopsis)
Match: AT2G36320.1 (A20/AN1-like zinc finger family protein) HSP 1 Score: 138.7 bits (348), Expect = 3.600e-33 Identity = 76/169 (44.97%), Postives = 102/169 (60.36%), Query Frame = 1
BLAST of Spo26955.1 vs. TAIR (Arabidopsis)
Match: AT3G52800.1 (A20/AN1-like zinc finger family protein) HSP 1 Score: 131.0 bits (328), Expect = 7.500e-31 Identity = 76/170 (44.71%), Postives = 107/170 (62.94%), Query Frame = 1
BLAST of Spo26955.1 vs. TAIR (Arabidopsis)
Match: AT1G12440.1 (A20/AN1-like zinc finger family protein) HSP 1 Score: 129.4 bits (324), Expect = 2.200e-30 Identity = 73/182 (40.11%), Postives = 108/182 (59.34%), Query Frame = 1
BLAST of Spo26955.1 vs. TAIR (Arabidopsis)
Match: AT2G27580.1 (A20/AN1-like zinc finger family protein) HSP 1 Score: 127.9 bits (320), Expect = 6.400e-30 Identity = 68/176 (38.64%), Postives = 104/176 (59.09%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo26955.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo26955.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo26955.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo26955.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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