Spo27034 (gene) | SpinachBase

Overview


Name	Spo27034
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	10 kDa chaperonin family protein
Location	SpoScf_00137 : 688271 .. 696818 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCCAGTTATTACTCAAACTAGAAAACACTAGAACGTTCTTCTTTCTTGGCAAAGGGGATATTTGAATATTTCTGCAATTTCAGTCAGATTTCCCTTAAACCCTCCCTTTTTCTCTCTCTCATAAACCCTAATCACCTGATCTAGGGTTTTATTTCCGTTCTCTTTCACCCGCCTTTGTTTATCGCAAATTTCAAATTTTAACTGAAAAATGGCGAAGCGTTTGATGCCATTGTTGAACAGAGTTTTGGTGGAGAAGATTGTTCCTCCTGCAAAGACTCACGCCGGCATTTTACTCCCCGAGACCAGCAACAAGGTATACTTCCTTACAATTTTACTCATTTTGGCTTTTGTCATTTGTTTTCTGCTTTATCTGTCTAATTCATGTGGGAAATTGTTGATTTTTATCCAATAAATTGGTTTTCTTTTTGATTTTTGAATTGGGTATTACGTAAGTTGGTAGATTTCTTCCCATTTTCTAAATTGTACTTCAGAAATGCGACTAAAATGAATGGGTTTATCTTATTCTAGTTGAAAAGTGTACTACATTAGTGGGGCTTATCCCTCTAACTATTTAGTTGATTAGATCATCCGTTGATTTTATTGTCAGTGATGCCTGTTAAACTGATTTAATGTGAAAATTTTCGGATTATCACGGTGAATAATCGTATAATTGTTCTTTATCGGTTGATTGAGGATTATTTCCAAGTTTGTGCTGTCTGTGAAGTGTGTCAACCCTGATTGTGATGCTTTTTCTTGAGGGGGGGTGTCAGTTGTTGTTCCTCCTGTAAAGGATTGTTGCTGAAATTTGTTAATTGAATTGGGTATTCAGCTTAATTCTGGAAAAGTTCTTGCTGTTGGACCTGGCCTTCGTGACAAGTCTGGGAATCATGTTCCTGTTGCTGTCAAAGAAGGGGATACTGTACTCCTGCCTGAATATGGAGGAACTACAGTGAAGCTTGGTGAAAAAGAGTAAGTTTATTGTTCTCCATAATTCTTTTTTGCTAAGAATCTACGATTAGTTGAGTGCTTTATCCCTGGATTCTTAAACAACTTTGTGGATGATGTTGATTCATGCTTTAGGTGTACTCCCTCCAAACTGAAATATTTTATTATGATATTGCTATTTGAACTAGCAATATGACAACTAAATCTGGTATTTTATAGAGTTTTGGAGATATGCCTTGATCATTTGTTTTGCCTTTTCCTTTGGGGGAAGGAAATGTTGGGAAGTTTTTTCTATCGGTGTTTTGCCTGTTTTTCTGAATGTCATGGTAGAGTCGTAGAGATAAGACAGTCAGATAGGTCTTGCGAAGTGAAGGTATTCTGTCGAATTCAAGTGTAACTCCATGATCCATCTTCACCATGAATAACATAGTTTATGTTGCAACTGATAGAAGATCCCTTTATGACATTAATAAGTTTGAGACATTCGTGACTTTCTATTTTACCCATTTGTGCCATCTGTTTTACTGCTAAAACGAGTATCACTTACAACAATGCTGGTAGAAAAGAGTAGTGCTAGCTCTTAGCATTAATGGGATCTGCTAGCATTGTAGGTATGAAGTGTTTGGTTAGGATCAAGCTAATTGTCATGTTTTTGCCAATGTGCTGATTTGTGGTTGTTCGTATTTCTAATTTCAATGATTATATCGGGGTTGAGAAGTTGGTAGCTGGCTTTGAGGCATTACCAAGTTCTGCTCGACTTGAATAGAACATAACTAGAATTGCTATGTAAAATGAATTTGGAAGACAATTAGACAAATACTTGGTTCCCTTTTCTTTTCTTATTCTTTGAAGGGGTTGGGGATTTATTTTAAGCAATTCCAACTTGTTATACGCAGTATGTTGCATTTTTGAGGGACCACCATTCTAATGGGTATAGCTATGAGGGTATATTTGAATTACCATATTATTTGATCAAAATGACAAATGGCCCGAAATGTGTCAAATGCTCTAGTATTTTCTCTTTCTTCATTTGAGGCCAAAAAGAAAGACAAAATGTTATAGGAGCCTAGAGACATTTAAAACAGGGGAAAGGTAACAAAGATTACAATATTGTTATCTAAGCTGGGTGAATAAAAATTGTTAACTAGTAACTTTAAGTAGTATTTTTCTAAATTAGGAGTTTTGGCAGGAAAGCTTGAAGATTGAGAGTAATGAACTATGAAAGCATACATATAATATATCTATGAAGAATTGTTTTTTTCTGCTTGAAATTCATGTCTTCTATCCATATTAGTTAGAATTTTGTTGGAAGAAAAATAAACCAACTAAAATAGTATTTTTCTCCTATCGAACTTTTTTTTATTTTCATACAACCATTATTTTTGTAGGTGAAACTTCTGTGTGTTAATTTGTACTCAACTGTTTTTGGCCTTCGACAAAAGGAAAATTTTACATTAGTAATAAATGCATTGGGCATAAGTTTGGACTCTTTAGAGGTTTTGTTTGTTGGGTTGGTTTCTGAATATATAGTACTTAAGAGCTCTGCTAATGTAATGAGTTCTCTTTAGTGGGCTAATAACTTATAAGCCAACCCCCTCTCCCCCTCCCAAGGTTTCTAAACCCCATAACTTGCTATTACCTAAAATCCGCAAACCAAAAACTCCCTTAGAGGTTTCGTGGGCTGGGTTGGTCTCAGAATATATAGAACTTAGGTGATTTTTGAATGTAATGAGTTCTCTTTATGCACGCCGGGGGGGGGGGGGATATGTATCTATTCTGAACTTTTTCCTTCGATTCAATTCAAGTGGATTCAGGGGTTTTGAAAACCCAATATTGCATTTTCAAAACTGTGTGAGCTCGTCTAATTTCTATCTGTCTATTTCCTGAAAATGCATTGAAGTTCCTAATTTAACTTCTAACTACTTCCTCCGTTCTTAAATGTTCTTCCCGTTTTCCCCACCCAAATTATTTAATTCATTCACATACCTCAATTCATTCACCCACCTTATTTTATGATTATTTTAATAAAATATATCTCTTTCATTTTTTCTTTATTATTTTCTCTCTCTTTCATTTATTCCAAAAAGTAGAATCTCTTACCCCCAATCATTGCTCTCACACTTAATCATACCAATATTCCATTTTTCTTAACCCCTCCCCGTTTCCAACCGGGAAGAACATTAAGGAACGGAGGAAGTAGTAACTTGAATAACTTTGGAATTGTAACTTATGATATTCTGTGAAATGCAGGTATCACTTGTACCGAGATGAAGATATAATGGGAACACTTCACGACTGATATTAATAAGTCATTTCCTGCCTTGATCAAGTACACTCTGATTTGTCATCTTAGGATTATTTAAAATTAGCAAATTGTTAATGAAGTAGCTATCTTAAAATTAAGTCAAGGTGGTAAAATGTGAACGCTATTTCATATCCTTTTGCGTATTGGAGAATGTTTTACTTGAATGGGTAAATGTACTTTTTACGGATTCGAAATATTCCTATCATGTTTCAACTTCAGTTACAGCTCTGTTTTGTTTCAAAATTTTTTAGGATATGGTTTCTTTTATCATTCATGATGGGTGTCTACTGTCTAGCTCAGACATATCTCTATTAAAGCAAAGAAGGAAATATCTTGCATAAACCCAGCCAAGAAAATCTTATTACAAATTATTACAATTGTCAAAATTAAATCAAATTGATGTTCAACTTAATTAAATCAAATCAGTCCAAGCCAAGAAAATTAAAAAAAACACCGGAAATCAGTATACGTGTTCTAAAAATTCCGTCACTGTTCTTCTTCAAGTTGTGCTGTTACATGTAAGTAACATATCTCACGAATCCATGCAAGAAAATTAAAATAGAAATTAAACAATTTTTTTATAATAAAAATTCGTGAATTTTTATGCATTTAAGATTGTTGCTATGTAGATTGGAACTGTCTAATTAAAGCACTTGCATTTATTTGTTTTGCAGATTTCAAAATATAAGGTATGTAATATACATGTTTTTATTGATTTTTAATTAATTATTTTATATTTTGATTCATGCTTTTAATTAATTAATAACTTATTTGATTTTAATCTCTAATTGCAGATTTTAAAATATAAGGTATGTATATAGAGTTTTGAGAGAGTGCAATAGCTTCTGAAAGATACAACATAATTTGTGTTATTGGAATTATGAAGAATTGAAAAATACATGATGTGCATCAGTTTTTATGCTGATTTTAAGTTAGGTTTTAAGTTTATAACGAGAAACAATCAACAACAATATCCAGTATGTGCCCCATCAATCCCTTAAGCATTAAAAATGTAGTACTGTCTCCTTTCTTAAATATTAGTCATGTTTTGACTTTTCAACTCGTTTCAACTCAATATTTAAACGTATATATCTCCAAATACATATGTTAGAAAAATATAAAAATTTGATATTGTAAAACCGCACATTAAGACAAACAAAATAAGATCTCATACGAATATATTTTAAAGTACGTAATGGAAAGAAATTAGAAAATCCTCTTCGATTGTGAATAGTGTCAAGATTCTAAAAGGGACTAATATTCGAGAACATAGGGAGTAATATGTATGCTTTATTGATTTTAATGATTTATTTTAGATTTTTGTTCATGCTTTTAATTAAATATTCTCTTATTTGATTTTAATATCTAATTTCAGATTCTATTGATTAAATAAATAGTTTATATGCATATTTTAAGTTGGGTTTTAAGTTCATAACGAGATACAAAACCAACGACATAAGGTGTTTGCCTCAATCTCTTAAAAAAAGTGGTAATATGCATGCTTTTATTGATTTTAATTAATTATTTCATATTTTAATTCATGCTTTTAATTAAATAGTCTCTTATTTGATTTTAATCTCTAATTTTAGATTTTATTAATTAAATAAATAGGAATTAATAATAATAATTCATGATTTTGTTGATTAAAAGTATGAATCGTGTATTGATTAAAATAAATAATGAAATAATTTGAAATATTCTACAAAATAATCTATTGCTAAGTAAATCTAAAATCATGAATTAAAATCATGAAAATCTGAAATAAATAATGGTTTTGCAGGTATTAATTTTGGTTTTATTTTCTATTTTAAGTTGGGTGTTAAGTTCGTCAAGGCATACAATAACCAGCGACATAAGATATGTGGCCCATCAATCTCTTAAACAAAAATAAGTAAATAGTAATATGTATGTTTTTATTGATCATAAAAAGAATAAAACACCAAAACTTGTAAAATGCATATTAAACAATTGGATACAAAAAAAAAACTATTAAATTAAATTATAATCTATTTAAAAGTAACTTAAAGGAGTTTTTCGGTTAAAATAAAAAAAAAAAAACTATAATCTATTCTAAATTAAATTAAAGCTATTTTAAAATGAAAAGAAAAAACTCCATTTTAATCTAAATAAAATTTTAAAATAATAATTTAAAAAAATTAAGTTATGACAAAATTTCATTATCCATTCCAATATACATCATCGAATTTTATTTTAAATTTATAAGTTTGTCACCGATTTAGAAAAAAAGATATTGAAAGGAGAAAACTTGAAACAAGTGCTTAGAAATATTAACGTNTATTTTAAATTTATAAGTTTGTCACCGATTTAGAAAAAAAGATATTGAAAGGAGAAAACTTGAAACAAGTGCTTAGAAATATTAACGTNCCGATTTAGAAAAAAAGATATTGAAAGGAGAAAACTTGAAACAAGTGCTTAGAAATATTAACGTTTAAATTTAATTCCCATAAAAAAATCAGCAATATTTATATTGTAACAATATTTAATATAAACAAGTTATAATAACCAAATTGATATGTGTAGTTTTTAGAGTTTTATAGTGGACGAAAACGAAGACCAATGTATGTAAGATCGAAGGTCGATATGGAGGGATAAAGAGAGACAACAGAGAAAATCACTTACTCTAGACAAAAAGATCGACAAAATGCCAAAAGAAGACTCATCTATGCGGGTGAACACCAATAAGATGTTGTAGTTACTCCTGAAAGTCAACCTTAAACATCATGTTCAGAAAGGCCTATGATTGTTAACAATACTCTCATCACTTTGGGAGTTAATGTGAAGGACGTGAATGTAAACAATATGAACATAATCATGTCATTTTAAGTATGTAAAAATGATCACTTACCTAACCAATGAAAAACGTGATTAGATAATGCAGTGCAACCTGTTGATGAACTTCGTTTACACGGCACTCAACACTCGTGCAAATCAAGAAAATCGATATTTTAGACGCTGAAAAATCGATTTTCTTGATTTGCCCGAGTATCGAGTAAACGAAGTTCATCAATAGGTTGCAAGCATTATCAAATCGTGTTTTTATTGGTTAAGTGATACTTTTAAATACTTAAAATGATGTGATTTTATTTAGATAGCTTACGTTCATGTCTTTCACATCCAGTCGTGACGTTATGGGCACGATTAGTGATGTCTGCCATAGATCTTCTAACTCCCTAAGTGTTGAAAGTATTGTTGACATTCATAGTTCCTTCTGAACATGATGTTTGAGGTTGACTTTCAGGAATATCTATAACATCCGATTGGTTTTCACCGGCATAGCTGAGTCTTCTTTTGGCATTTAGACGATCTTTTTGTTATGGAGTAGGCGATTTTCTTTGTTGTCTCTTTTTATCCCTCCATATCGACTTTCGATCTTGCATACATTGTCTTCGTTTTTTGCCATTATAAAGCTNGATCTTTTTGTTATGGAGTAGGCGATTTTCTTTGTTGTCTCTTTTTATCCCTCCATATCGACTTTCGATCTTGCATACATTGTCTTCGTTTTTTGCCATTATAAAGCTAAAAACTACACATATCAATTTGGTTATTATAACTNTTATCCCTCCATATCGACTTTCGATCTTGCATACATTGTCTTCGTTTTTTGCCATTATAAAGCTCTAAAAACTACACATATCAATTTGGTTATTATAACTTGTTTATGTTAAACATTGTTATAGTATTGATATTGCTGACTTTTTATTAAGGGGATTAAATTTAAACGTTAATGTTTCTAAGCACTTGTTCCAATTTTTTTCTTTTCAATATCGTTTTATTCTAAATCAGTAACAAACACTATTTTTTAAAAAATTCGATGATGTATATTGGAAATGGATGATGAAATTTTGTTATGACTTAATTTTTTAAAATTATTATTTTAAGTTTTTATATAGATTAAAATGAAGATTTTTCTTTTCATTTTAAATGGCTTTAATTTAATTTAAAACATATATTCTCTTTATGACTTTTAACCGAAAAACTCCTTCAAGTTATTTTAAAATAGATTACAATATAATTTAATAGTTTTTTCTTTGTATTCAATTTGTTAATATGTATTTTATAAGTTTTGGTGTTTGTCTTTTCTTGATCAATAAAAACATGCATATTAGTATTTATTTTTTTGTTTAAGAGATTGATGGGCCACATATCTTATGTCGTTGGTTATTTTATGTCTTGAAGAACTTAACACCCAACTAAAAATCAATCTTAAAACCAAAATTAATATCTGCAAAACCATTATTTATTTCAGATTTTTATGATTTTAGTTCATGTTTTTAAATTTATTTTGTAGATTATTTTAGATTTATTTTAATCAATACATAATTCATGATTTTAATCAATAAAATCATGAATTGTTATTGTTAAGTCCTATTTGTTTAATCAATAAAATATGAAATTAGAGATCAAAATTAAACAAGAGATTATTTAATTAAAAGTATGAATTAAAATATGAAATAATTAATTAAAATCAATAAAAGCATGCATATTACTATTTTTTTAAGAGATTGATTGGGAAAATACCTTATGTTGTTGGTTATTGTATCTCGTTATGAACTTAAAACCCAACTTAAAATATGCATATAAATGATTTATTTAATCAATAGAATTTGAAATTAGAGATTAAATCAAATAAGAGATTATTTAATTAAAAGCATGAATTAAATGAAATAATTAATTAAAATCAGTAAAGCATGCATATTGCTATTTTTTTTGTTTANAAAAGCATGAATTAAATGAAATAATTAATTAAAATCAGTAAAGCATGCATATTGCTATTTTTTTGTTTAAGGGATTGATGAGGCACATACCGTATATTGTTGTTTATTGTATCTCGTTATTAACTTAAACCCAATCTAAAATCTGCATAAAAACTAATGCAAGTCATGTATTTTTCAATTCATAATTCCAATAACACAAATTTATGTTATGTCTTTCGGAAGCTATTGCACGCTTCCAAAATCTTATAAACATACCTTATATTTTGAAATCTACAATTGGAGATTAAAATCAAATAAGAGATTATTTAATTAAAAACATGAATCAAAATATAAAATAATTAATTAAAAAAAGCATGCATATTATATACCTTATATTTTGAAATCTGCAAAAAAAGACGCAAGTGTTTTAGTTAGATAGATTTAATCTACATAGCAACAATATTAAAAAAAAAAAACAGTTGTTTATGTATAAAAATTCACGAATTATTACTATAAAAAATTGTTTAATTTATGTTTTTATTTTCTTCCAAGGGTTCAGAAAGATATTACTTATGTGTATCG

mRNA sequence

GTCCAGTTATTACTCAAACTAGAAAACACTAGAACGTTCTTCTTTCTTGGCAAAGGGGATATTTGAATATTTCTGCAATTTCAGTCAGATTTCCCTTAAACCCTCCCTTTTTCTCTCTCTCATAAACCCTAATCACCTGATCTAGGGTTTTATTTCCGTTCTCTTTCACCCGCCTTTGTTTATCGCAAATTTCAAATTTTAACTGAAAAATGGCGAAGCGTTTGATGCCATTGTTGAACAGAGTTTTGGTGGAGAAGATTGTTCCTCCTGCAAAGACTCACGCCGGCATTTTACTCCCCGAGACCAGCAACAAGCTTAATTCTGGAAAAGTTCTTGCTGTTGGACCTGGCCTTCGTGACAAGTCTGGGAATCATGTTCCTGTTGCTGTCAAAGAAGGGGATACTGTACTCCTGCCTGAATATGGAGGAACTACAGTGAAGCTTGGTGAAAAAGAGTATCACTTGTACCGAGATGAAGATATAATGGGAACACTTCACGACTGATATTAATAAGTCATTTCCTGCCTTGATCAAAAAGATATTACTTATGTGTATCG

Coding sequence (CDS)

ATGGCGAAGCGTTTGATGCCATTGTTGAACAGAGTTTTGGTGGAGAAGATTGTTCCTCCTGCAAAGACTCACGCCGGCATTTTACTCCCCGAGACCAGCAACAAGCTTAATTCTGGAAAAGTTCTTGCTGTTGGACCTGGCCTTCGTGACAAGTCTGGGAATCATGTTCCTGTTGCTGTCAAAGAAGGGGATACTGTACTCCTGCCTGAATATGGAGGAACTACAGTGAAGCTTGGTGAAAAAGAGTATCACTTGTACCGAGATGAAGATATAATGGGAACACTTCACGACTGA

Protein sequence

MAKRLMPLLNRVLVEKIVPPAKTHAGILLPETSNKLNSGKVLAVGPGLRDKSGNHVPVAVKEGDTVLLPEYGGTTVKLGEKEYHLYRDEDIMGTLHD

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo27034.1	Spo27034.1	mRNA

Homology

[Close]

BLAST of Spo27034.1 vs. NCBI nr
Match: gi|902204284|gb|KNA14826.1| (hypothetical protein SOVF_103900 [Spinacia oleracea])

HSP 1 Score: 196.1 bits (497), Expect = 2.900e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1


		  
Query: 1  MAKRLMPLLNRVLVEKIVPPAKTHAGILLPETSNKLNSGKVLAVGPGLRDKSGNHVPVAV 60
          MAKRLMPLLNRVLVEKIVPPAKTHAGILLPETSNKLNSGKVLAVGPGLRDKSGNHVPVAV
Sbjct: 1  MAKRLMPLLNRVLVEKIVPPAKTHAGILLPETSNKLNSGKVLAVGPGLRDKSGNHVPVAV 60

Query: 61 KEGDTVLLPEYGGTTVKLGEKEYHLYRDEDIMGTLHD 98
          KEGDTVLLPEYGGTTVKLGEKEYHLYRDEDIMGTLHD
Sbjct: 61 KEGDTVLLPEYGGTTVKLGEKEYHLYRDEDIMGTLHD 97

[Close]

BLAST of Spo27034.1 vs. NCBI nr
Match: gi|731324592|ref|XP_010673053.1| (PREDICTED: 10 kDa chaperonin-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 185.3 bits (469), Expect = 5.200e-44
Identity = 91/97 (93.81%), Postives = 95/97 (97.94%), Query Frame = 1


		  
Query: 1  MAKRLMPLLNRVLVEKIVPPAKTHAGILLPETSNKLNSGKVLAVGPGLRDKSGNHVPVAV 60
          MAKRLMPLLNRVLVEKIVPP+KT AGILLPETS+KLNSGKVLAVGPGLRDK GNHVPV+V
Sbjct: 1  MAKRLMPLLNRVLVEKIVPPSKTTAGILLPETSSKLNSGKVLAVGPGLRDKQGNHVPVSV 60

Query: 61 KEGDTVLLPEYGGTTVKLGEKEYHLYRDEDIMGTLHD 98
          KEGDTVLLPEYGGTTVKLGEKEYHLYRD+DIMGTLHD
Sbjct: 61 KEGDTVLLPEYGGTTVKLGEKEYHLYRDDDIMGTLHD 97

[Close]

BLAST of Spo27034.1 vs. NCBI nr
Match: gi|747049172|ref|XP_011070622.1| (PREDICTED: 10 kDa chaperonin-like [Sesamum indicum])

HSP 1 Score: 174.5 bits (441), Expect = 9.100e-41
Identity = 85/97 (87.63%), Postives = 93/97 (95.88%), Query Frame = 1


		  
Query: 1  MAKRLMPLLNRVLVEKIVPPAKTHAGILLPETSNKLNSGKVLAVGPGLRDKSGNHVPVAV 60
          MAKRL+P LNRVLVEKIVPP+KT AGILLPE S+KLNSGKV+AVGPGLRDK+GN++PVAV
Sbjct: 1  MAKRLIPTLNRVLVEKIVPPSKTTAGILLPEKSSKLNSGKVVAVGPGLRDKAGNNIPVAV 60

Query: 61 KEGDTVLLPEYGGTTVKLGEKEYHLYRDEDIMGTLHD 98
          KEGDTVLLPEYGGT VKLGEKEYHLYRDEDI+GTLHD
Sbjct: 61 KEGDTVLLPEYGGTQVKLGEKEYHLYRDEDILGTLHD 97

[Close]

BLAST of Spo27034.1 vs. NCBI nr
Match: gi|698507911|ref|XP_009799257.1| (PREDICTED: 10 kDa chaperonin-like [Nicotiana sylvestris])

HSP 1 Score: 168.7 bits (426), Expect = 5.000e-39
Identity = 82/97 (84.54%), Postives = 90/97 (92.78%), Query Frame = 1


		  
Query: 1  MAKRLMPLLNRVLVEKIVPPAKTHAGILLPETSNKLNSGKVLAVGPGLRDKSGNHVPVAV 60
          MAKRL+P LNRVL+EKI  PAKT+AGILLPE S+KLNSGKV+AVGPGLRDKSGN +P AV
Sbjct: 1  MAKRLLPTLNRVLIEKITAPAKTNAGILLPEKSSKLNSGKVVAVGPGLRDKSGNLIPTAV 60

Query: 61 KEGDTVLLPEYGGTTVKLGEKEYHLYRDEDIMGTLHD 98
          KEGDTVLLPEYGGT VKLGEKE+HLYRDEDI+GTLHD
Sbjct: 61 KEGDTVLLPEYGGTQVKLGEKEFHLYRDEDILGTLHD 97

[Close]

BLAST of Spo27034.1 vs. NCBI nr
Match: gi|747041865|ref|XP_011075517.1| (PREDICTED: 10 kDa chaperonin-like [Sesamum indicum])

HSP 1 Score: 168.3 bits (425), Expect = 6.500e-39
Identity = 84/98 (85.71%), Postives = 92/98 (93.88%), Query Frame = 1


		  
Query: 1  MAKRLMPLLNRVLVEKIVPPAKTHAGILLPETSNKLNSGKVLAVGPGLRDKSG-NHVPVA 60
          MAKRL+P LNRVLVEKIVPP+KT AGILLPE S+KLNSGKV+AVGPGLR ++G NH+PVA
Sbjct: 1  MAKRLIPTLNRVLVEKIVPPSKTTAGILLPEKSSKLNSGKVVAVGPGLRGEAGGNHIPVA 60

Query: 61 VKEGDTVLLPEYGGTTVKLGEKEYHLYRDEDIMGTLHD 98
          VKEGDTVLLPEYGGT VKLGEKEYHLYRDEDI+GTLHD
Sbjct: 61 VKEGDTVLLPEYGGTQVKLGEKEYHLYRDEDILGTLHD 98

[Close]

BLAST of Spo27034.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R5P3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_103900 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.000e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1


		  
Query: 1  MAKRLMPLLNRVLVEKIVPPAKTHAGILLPETSNKLNSGKVLAVGPGLRDKSGNHVPVAV 60
          MAKRLMPLLNRVLVEKIVPPAKTHAGILLPETSNKLNSGKVLAVGPGLRDKSGNHVPVAV
Sbjct: 1  MAKRLMPLLNRVLVEKIVPPAKTHAGILLPETSNKLNSGKVLAVGPGLRDKSGNHVPVAV 60

Query: 61 KEGDTVLLPEYGGTTVKLGEKEYHLYRDEDIMGTLHD 98
          KEGDTVLLPEYGGTTVKLGEKEYHLYRDEDIMGTLHD
Sbjct: 61 KEGDTVLLPEYGGTTVKLGEKEYHLYRDEDIMGTLHD 97

[Close]

BLAST of Spo27034.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CNV7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g063180 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 3.600e-44
Identity = 91/97 (93.81%), Postives = 95/97 (97.94%), Query Frame = 1


		  
Query: 1  MAKRLMPLLNRVLVEKIVPPAKTHAGILLPETSNKLNSGKVLAVGPGLRDKSGNHVPVAV 60
          MAKRLMPLLNRVLVEKIVPP+KT AGILLPETS+KLNSGKVLAVGPGLRDK GNHVPV+V
Sbjct: 1  MAKRLMPLLNRVLVEKIVPPSKTTAGILLPETSSKLNSGKVLAVGPGLRDKQGNHVPVSV 60

Query: 61 KEGDTVLLPEYGGTTVKLGEKEYHLYRDEDIMGTLHD 98
          KEGDTVLLPEYGGTTVKLGEKEYHLYRD+DIMGTLHD
Sbjct: 61 KEGDTVLLPEYGGTTVKLGEKEYHLYRDDDIMGTLHD 97

[Close]

BLAST of Spo27034.1 vs. UniProtKB/TrEMBL
Match: A0A103YAF0_CYNCS (Chaperonin Cpn10 OS=Cynara cardunculus var. scolymus GN=Ccrd_016242 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.000e-38
Identity = 81/97 (83.51%), Postives = 90/97 (92.78%), Query Frame = 1


		  
Query: 1  MAKRLMPLLNRVLVEKIVPPAKTHAGILLPETSNKLNSGKVLAVGPGLRDKSGNHVPVAV 60
          MAKRL+P LNRVLVEKIVPP+KT AGILLPE S+KLNSGKV+AVGPG RDKSGN +PV+V
Sbjct: 1  MAKRLIPCLNRVLVEKIVPPSKTTAGILLPEKSSKLNSGKVIAVGPGTRDKSGNTIPVSV 60

Query: 61 KEGDTVLLPEYGGTTVKLGEKEYHLYRDEDIMGTLHD 98
           EGDTVLLPEYGGT VKLGEK+YHL+RDEDI+GTLHD
Sbjct: 61 NEGDTVLLPEYGGTEVKLGEKQYHLFRDEDILGTLHD 97

[Close]

BLAST of Spo27034.1 vs. UniProtKB/TrEMBL
Match: A0A059D6K0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02909 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.000e-38
Identity = 83/97 (85.57%), Postives = 89/97 (91.75%), Query Frame = 1


		  
Query: 1  MAKRLMPLLNRVLVEKIVPPAKTHAGILLPETSNKLNSGKVLAVGPGLRDKSGNHVPVAV 60
          MAKRL+PLLNRVLVEKIVPP+KT AGILLPE S KLNSGKV+AVGPG RD  GN VPV+V
Sbjct: 1  MAKRLVPLLNRVLVEKIVPPSKTTAGILLPEKSAKLNSGKVVAVGPGARDAHGNAVPVSV 60

Query: 61 KEGDTVLLPEYGGTTVKLGEKEYHLYRDEDIMGTLHD 98
          KEGDTVLLPEYGGT VKLGEK+YHLYRDEDI+GTLHD
Sbjct: 61 KEGDTVLLPEYGGTQVKLGEKDYHLYRDEDILGTLHD 97

[Close]

BLAST of Spo27034.1 vs. UniProtKB/TrEMBL
Match: K4C2W3_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 5.000e-38
Identity = 80/97 (82.47%), Postives = 88/97 (90.72%), Query Frame = 1


		  
Query: 1  MAKRLMPLLNRVLVEKIVPPAKTHAGILLPETSNKLNSGKVLAVGPGLRDKSGNHVPVAV 60
          MAKRL+P LNRVL+EKI  PAKT AGILLPE S+KLNSGKV+AVGPGL DK+GN +P AV
Sbjct: 1  MAKRLIPTLNRVLIEKITAPAKTSAGILLPENSSKLNSGKVVAVGPGLHDKTGNLIPTAV 60

Query: 61 KEGDTVLLPEYGGTTVKLGEKEYHLYRDEDIMGTLHD 98
          KEGDTVLLPEYGGT VKLGEKE+HLYRDEDI+GTLHD
Sbjct: 61 KEGDTVLLPEYGGTQVKLGEKEFHLYRDEDILGTLHD 97

[Close]

BLAST of Spo27034.1 vs. ExPASy Swiss-Prot
Match: CH10_ARATH (10 kDa chaperonin OS=Arabidopsis thaliana GN=CPN10 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.300e-36
Identity = 70/97 (72.16%), Postives = 85/97 (87.63%), Query Frame = 1


		  
Query: 1  MAKRLMPLLNRVLVEKIVPPAKTHAGILLPETSNKLNSGKVLAVGPGLRDKSGNHVPVAV 60
          M KRL+P  NR+LV++++ PAKT +GILLPE S+KLNSGKV+AVGPG RDK G  +PV+V
Sbjct: 1  MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTTVKLGEKEYHLYRDEDIMGTLHD 98
          KEGDTVLLPEYGGT VKLGE EYHL+RDED++GTLH+
Sbjct: 61 KEGDTVLLPEYGGTQVKLGENEYHLFRDEDVLGTLHE 97

[Close]

BLAST of Spo27034.1 vs. ExPASy Swiss-Prot
Match: CH10_BRANA (10 kDa chaperonin OS=Brassica napus PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 4.000e-36
Identity = 70/97 (72.16%), Postives = 85/97 (87.63%), Query Frame = 1


		  
Query: 1  MAKRLMPLLNRVLVEKIVPPAKTHAGILLPETSNKLNSGKVLAVGPGLRDKSGNHVPVAV 60
          M KRL+P  NR+LV+ ++ PAKT +GILLPE ++KLNSGKV+AVGPG RDK G  +PV+V
Sbjct: 1  MMKRLIPTFNRILVQGVIQPAKTESGILLPEKASKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTTVKLGEKEYHLYRDEDIMGTLHD 98
          KEGDTVLLPEYGGT VKLGEKEYHL+RDED++GTLH+
Sbjct: 61 KEGDTVLLPEYGGTQVKLGEKEYHLFRDEDVLGTLHE 97

[Close]

BLAST of Spo27034.1 vs. ExPASy Swiss-Prot
Match: CH10_SCHPO (10 kDa heat shock protein, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=hsp10 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.100e-17
Identity = 45/97 (46.39%), Postives = 67/97 (69.07%), Query Frame = 1


		  
Query: 2   AKRLMPLLNRVLVEKIVPPAKTHAGILLPETS-NKLNSGKVLAVGPGLRDKSGNHVPVAV 61
           AK ++PLL+R+LV++I    KT +GI LPE S  KL+ G+V++VG G  +K G     +V
Sbjct: 8   AKSIVPLLDRILVQRIKADTKTASGIFLPEKSVEKLSEGRVISVGKGGYNKEGKLAQPSV 67

Query: 62  KEGDTVLLPEYGGTTVKLGEKEYHLYRDEDIMGTLHD 98
             GD VLLP YGG+ +K+GE+EY LYRD +++  + +
Sbjct: 68  AVGDRVLLPAYGGSNIKVGEEEYSLYRDHELLAIIKE 104

[Close]

BLAST of Spo27034.1 vs. ExPASy Swiss-Prot
Match: CH10_YEAST (10 kDa heat shock protein, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HSP10 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.400e-17
Identity = 47/96 (48.96%), Postives = 69/96 (71.88%), Query Frame = 1


		  
Query: 2   AKRLMPLLNRVLVEKIVPPAKTHAGILLPETS-NKLNSGKVLAVGPGLRDKSGNHVPVAV 61
           AK ++PL++RVLV++I   AKT +G+ LPE +  KLN  +V+AVGPG  D +GN V   V
Sbjct: 8   AKSIVPLMDRVLVQRIKAQAKTASGLYLPEKNVEKLNQAEVVAVGPGFTDANGNKVVPQV 67

Query: 62  KEGDTVLLPEYGGTTVKLG-EKEYHLYRDEDIMGTL 96
           K GD VL+P++GG+T+KLG + E  L+RD +I+  +
Sbjct: 68  KVGDQVLIPQFGGSTIKLGNDDEVILFRDAEILAKI 103

[Close]

BLAST of Spo27034.1 vs. ExPASy Swiss-Prot
Match: CH10_MOUSE (10 kDa heat shock protein, mitochondrial OS=Mus musculus GN=Hspe1 PE=1 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 1.400e-17
Identity = 49/96 (51.04%), Postives = 63/96 (65.62%), Query Frame = 1


		  
Query: 3   KRLMPLLNRVLVEKIVPPAKTHAGILLPETSN-KLNSGKVLAVGPGLRDKSGNHVPVAVK 62
           ++ +PL +RVLVE+      T  GI+LPE S  K+    V+AVG G + KSG   PV+VK
Sbjct: 7   RKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGGKGKSGEIEPVSVK 66

Query: 63  EGDTVLLPEYGGTTVKLGEKEYHLYRDEDIMGTLHD 98
            GD VLLPEYGGT V L +K+Y L+RD DI+G   D
Sbjct: 67  VGDKVLLPEYGGTKVVLDDKDYFLFRDSDILGKYVD 102

[Close]

BLAST of Spo27034.1 vs. TAIR (Arabidopsis)
Match: AT1G14980.1 (chaperonin 10)

HSP 1 Score: 152.5 bits (384), Expect = 1.300e-37
Identity = 70/97 (72.16%), Postives = 85/97 (87.63%), Query Frame = 1


		  
Query: 1  MAKRLMPLLNRVLVEKIVPPAKTHAGILLPETSNKLNSGKVLAVGPGLRDKSGNHVPVAV 60
          M KRL+P  NR+LV++++ PAKT +GILLPE S+KLNSGKV+AVGPG RDK G  +PV+V
Sbjct: 1  MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTTVKLGEKEYHLYRDEDIMGTLHD 98
          KEGDTVLLPEYGGT VKLGE EYHL+RDED++GTLH+
Sbjct: 61 KEGDTVLLPEYGGTQVKLGENEYHLFRDEDVLGTLHE 97

[Close]

BLAST of Spo27034.1 vs. TAIR (Arabidopsis)
Match: AT1G23100.1 (GroES-like family protein)

HSP 1 Score: 151.8 bits (382), Expect = 2.200e-37
Identity = 73/97 (75.26%), Postives = 88/97 (90.72%), Query Frame = 1


		  
Query: 1  MAKRLMPLLNRVLVEKIVPPAKTHAGILLPETSNKLNSGKVLAVGPGLRDKSGNHVPVAV 60
          MAKRL+P LNRVLVEKI+PP+KT +GILLPE S++LNSG+V+AVGPG RD++GN +PV+V
Sbjct: 1  MAKRLIPTLNRVLVEKILPPSKTVSGILLPEKSSQLNSGRVIAVGPGARDRAGNLIPVSV 60

Query: 61 KEGDTVLLPEYGGTTVKLGEKEYHLYRDEDIMGTLHD 98
          KEGD VLLPE+GGT VKLGEKE+ LYRDEDIM TLH+
Sbjct: 61 KEGDNVLLPEFGGTQVKLGEKEFLLYRDEDIMATLHE 97

The following BLAST results are available for this feature:

BLAST of Spo27034.1 vs. NCBI nr
BLAST of Spo27034.1 vs. UniProtKB/TrEMBL
BLAST of Spo27034.1 vs. ExPASy Swiss-Prot
BLAST of Spo27034.1 vs. TAIR (Arabidopsis)

BLAST of Spo27034.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902204284\|gb\|KNA14826.1\|	2.9e-47	100.	hypothetical protein SOVF_1039...	[more]
gi\|731324592\|ref\|XP_010673053.1\|	5.2e-44	93.8	PREDICTED: 10 kDa chaperonin-l...	[more]
gi\|747049172\|ref\|XP_011070622.1\|	9.1e-41	87.6	PREDICTED: 10 kDa chaperonin-l...	[more]
gi\|698507911\|ref\|XP_009799257.1\|	5.0e-39	84.5	PREDICTED: 10 kDa chaperonin-l...	[more]
gi\|747041865\|ref\|XP_011075517.1\|	6.5e-39	85.7	PREDICTED: 10 kDa chaperonin-l...	[more]

BLAST of Spo27034.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R5P3_SPIOL	2.0e-47	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CNV7_BETVU	3.6e-44	93.8	Uncharacterized protein OS=Bet...	[more]
A0A103YAF0_CYNCS	1.0e-38	83.5	Chaperonin Cpn10 OS=Cynara car...	[more]
A0A059D6K0_EUCGR	1.0e-38	85.5	Uncharacterized protein OS=Euc...	[more]
K4C2W3_SOLLC	5.0e-38	82.4	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo27034.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
CH10_ARATH	2.3e-36	72.1	10 kDa chaperonin OS=Arabidops...	[more]
CH10_BRANA	4.0e-36	72.1	10 kDa chaperonin OS=Brassica ...	[more]
CH10_SCHPO	1.1e-17	46.3	10 kDa heat shock protein, mit...	[more]
CH10_YEAST	1.4e-17	48.9	10 kDa heat shock protein, mit...	[more]
CH10_MOUSE	1.4e-17	51.0	10 kDa heat shock protein, mit...	[more]

BLAST of Spo27034.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G14980.1	1.3e-37	72.1	chaperonin 10	[more]
AT1G23100.1	2.2e-37	75.2	GroES-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011032	GroES-like	unknown	SSF50129	GroES-like	coord: 3..96 score: 1.18
IPR020818	GroES chaperonin family	PRINTS	PR00297	CHAPERONIN10	coord: 61..73 score: 2.2E-16coord: 26..47 score: 2.2E-16coord: 5..20 score: 2.2E-16coord: 82..95 score: 2.2
IPR020818	GroES chaperonin family	GENE3D	2.30.33.40		coord: 3..95 score: 5.2
IPR020818	GroES chaperonin family	PANTHER	PTHR10772	10 KDA HEAT SHOCK PROTEIN	coord: 1..97 score: 2.4
IPR020818	GroES chaperonin family	PFAM	PF00166	Cpn10	coord: 6..94 score: 9.6
IPR020818	GroES chaperonin family	SMART	SM00883	Cpn10_2	coord: 4..95 score: 2.5
None	No IPR available	PANTHER	PTHR10772:SF8	10 KDA CHAPERONIN	coord: 1..97 score: 2.4

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0008152	metabolic process
biological_process	GO:0015991	ATP hydrolysis coupled proton transport
biological_process	GO:0018279	protein N-linked glycosylation via asparagine
biological_process	GO:0043069	negative regulation of programmed cell death
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0033179	proton-transporting V-type ATPase, V0 domain
cellular_component	GO:0008250	oligosaccharyltransferase complex
cellular_component	GO:0009512	cytochrome b6f complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005835	fatty acid synthase complex
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0031901	early endosome membrane
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004579	dolichyl-diphosphooligosaccharide-protein glycotransferase activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
molecular_function	GO:0003779	actin binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0015078	proton transmembrane transporter activity
molecular_function	GO:0004316	3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
molecular_function	GO:0003677	DNA binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo22583	0.75	Barchart \| Table
Spo16079	0.73	Barchart \| Table
Spo16797	0.71	Barchart \| Table
Spo24380	0.67	Barchart \| Table
Spo02890	0.67	Barchart \| Table
Spo16695	0.67	Barchart \| Table
Spo21040	0.67	Barchart \| Table
Spo01714	0.67	Barchart \| Table
Spo23549	0.66	Barchart \| Table
Spo06031	0.65	Barchart \| Table
Spo10373	0.65	Barchart \| Table