Spo27074 (gene)

Overview
NameSpo27074
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr4 : 10532304 .. 10533948 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCAAGATCGTGAACACATGATTGGTTTTACATGTATATATGCTTACATGACCTCTATGAGTATCTCTTTTTCGCAAGGAGAGAAAATGCTGTCAGGAATGTTGACGTGAAAAAAGGCTCTTGTCTCAATTAATTTATTTTCCTATCTGGTCAAAAAAGAATCCTTTCTGCTTCTATTTCACTTGACATATTGTACCAAAAATGTCTTATTTGATGCCAATTCCGGATATCGCAAAAATCAAATCTGCTTGATTCAGCCGACTACCAATCCTTTAGACTCTAAGAAGCAAATATTAAAAATACTACTGTGTTATTTTTTCATAATTTTTATATTCATTTGTTATCATTTTGCAAGGAGATCTAAATGGATACAGAGGTATTTGGCAAGAAACTTCCTAGAAAATCATAATTTCCAAGTATTGGAGCATTGTTTCCTTCTCTAGCTTATACCATGCCTTTGCTTTGTATTACAGTAATCTTTCTTTCCTTACATTCTTACATTTTCCAAAATTGGAATATTTCTTTTCCTTATGACCATGGTTAGAAAAATAAAGCAGTTGAGGATCATAGAGGATACTGTATTTAGCAGGCAATTATCTTTTGCGAAGCGACGAAATGGACTACTAACAAAGAATTAGAGTTACACTTGGTGTGTGGTGTTGATTCTGTATTTATAGCCTTCTCTCCTTCTGGTCGCTCAGCTATCTTTGTGGTGACAAAAGGTATTCTTTGTCGACTTATATGTGTTGCTTATTTTTTCTTTTTCATGGTCTCTGAACACGCATGTATCCGTACATGTAAATACACTGCTTACACACTTGGAGGATGTGCTGATTTTTTCTTCTAACTTCTAAAACCTCCTTTGCTTGTTCAGGGCTGGTGATGTTATAAGTCGTTTTGTTGCATTGCCAGAACATTTCCGACAGTTGTAAGAGTCTCATATCATTTTTCTTTTGGTGTGAAGTTAGTACGCTGTAGAATATAGTAAGAATGGTGGCAATTCATTTTCATATTGGATTTCTTGTACAAATGCTTAAAAGAAAATCTAGTAGCAATTAGCAAGCAATGCAGTCTTGTATTAATTGGGTGGTCTCACATTTTATGTTGCATAAATTAACTGTTTTGTAGCCATTTACCAGATTGGGAGGTAATGCCATTTGTGTTAGATTTTGACATTTATACTACAAGGGCGGTGAGTTTAGCAGTCGCTATGCAGGCTGCATAGCGACTTGCGACTTTAAATATATACTCGGATACACATGTATTTGTATTCTTTTCTTTTGGGGTTGTTTATCTTTTTTATATCGGTTTTAGGGGTTTTTAAGATAGAAGGAAAAATATGAAAGTCAAGGTTGTTATTCACTTTATTTTGTTGCAGTTGCAGCTTTTACTTGATATAGTCAACCAGCTTAGAGAACCAACAAAGGACCATATCAGAGTGATCGGTAAACCTTAGCTACATTAATCCTTTTCCTCTCTTCATCATTTTATATGCCAATATATTAGAAGAAACAACTTCACAAAAGGGCCACGGTTCACCTAGATTAATCCTTTTTTAACTTCTCTTCTTCTGCGTGTATTAATCCGATGAATGTGATTTGAATTTTGTGCTCTTATGATGTTTTACAAGAAAAAAAACAC

mRNA sequence

ATGTTGCAAGATCGTGAACACATGATTGGTTTTACATGTATATATGCTTACATGACCTCTATGAGTATCTCTTTTTCGCAAGGAGAGAAAATGCTGTCAGGAATGTTGACCCTTCTCTCCTTCTGGTCGCTCAGCTATCTTTGTGGTGACAAAAGGGCTGGTGATGTTATAAGTCGTTTTGTTGCATTGCCAGAACATTTCCGACAGTTTTGCAGCTTTTACTTGATATAGTCAACCAGCTTAGAGAACCAACAAAGGACCATATCAGAGTGATCGGTAAACCTTAGCTACATTAATCCTTTTCCTCTCTTCATCATTTTATATGCCAATATATTAGAAGAAACAACTTCACAAAAGGGCCACGGTTCACCTAGATTAATCCTTTTTTAACTTCTCTTCTTCTGCGTGTATTAATCCGATGAATGTGATTTGAATTTTGTGCTCTTATGATGTTTTACAAGAAAAAAAACAC

Coding sequence (CDS)

ATGTTGCAAGATCGTGAACACATGATTGGTTTTACATGTATATATGCTTACATGACCTCTATGAGTATCTCTTTTTCGCAAGGAGAGAAAATGCTGTCAGGAATGTTGACCCTTCTCTCCTTCTGGTCGCTCAGCTATCTTTGTGGTGACAAAAGGGCTGGTGATGTTATAAGTCGTTTTGTTGCATTGCCAGAACATTTCCGACAGTTTTGCAGCTTTTACTTGATATAG

Protein sequence

MLQDREHMIGFTCIYAYMTSMSISFSQGEKMLSGMLTLLSFWSLSYLCGDKRAGDVISRFVALPEHFRQFCSFYLI
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo27074.1Spo27074.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo27074.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo27074.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo27074.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo27074.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
biological_process GO:0071805 potassium ion transmembrane transport
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0006432 phenylalanyl-tRNA aminoacylation
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0061025 membrane fusion
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0008152 metabolic process
biological_process GO:0032482 Rab protein signal transduction
biological_process GO:0009737 response to abscisic acid
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0016049 cell growth
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0000902 cell morphogenesis
biological_process GO:0006090 pyruvate metabolic process
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0043547 positive regulation of GTPase activity
biological_process GO:0006097 glyoxylate cycle
biological_process GO:0006396 RNA processing
biological_process GO:0006099 tricarboxylic acid cycle
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009328 phenylalanine-tRNA ligase complex
cellular_component GO:0005773 vacuole
cellular_component GO:0005622 intracellular
cellular_component GO:0016020 membrane
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0008076 voltage-gated potassium channel complex
cellular_component GO:0000785 chromatin
cellular_component GO:0005634 nucleus
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005777 peroxisome
molecular_function GO:0004000 adenosine deaminase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0019003 GDP binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0000049 tRNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0005096 GTPase activator activity
molecular_function GO:0019905 syntaxin binding
molecular_function GO:0004474 malate synthase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0015297 antiporter activity
molecular_function GO:0004826 phenylalanine-tRNA ligase activity
molecular_function GO:0015238 drug transmembrane transporter activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0004518 nuclease activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0005249 voltage-gated potassium channel activity
RNA-Seq Expression