Spo27136 (gene)

Overview
NameSpo27136
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr5 : 27788861 .. 27791145 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTCCACTTCACTCAACTGCTGAAACCGCAACAATGCAACAGCAACTGCAAAACCAAAATCAAAATCAAAATCAAAATCCATGGAACTTAAGAATTCAGGCCAAGATTAATCGCCATTTTAGTCTCGATTTCAATCTCAATCTCCACACTCGCCTACCTCCTTTTTCTCTCCTCCTCGATCTCAAATTCCTAAAATCCCATATTTTCCTTTGCTCCGATTTCTCATCTTCAACTAAACCTAAAATCAGCCACAAATTTCTTCGATTTTTCAGTAAATTAATACCCAAGAAGTCCAAAATTTCACCAATTTCTTCCCAGAAACCAACAATTAAGTCGAAACTCATCCGATATCCTAGCAAATTACTGTCGAAGAAATCCAAGAAAATCCCGCCCGTTTCTTCCCTGAAAAGCGCCGTGAATTTGCAATCTTTTTGGGTCGCTTTGCTTGTTACAATGTTGGTATCTTTCATTCGTAACCCTATGCTTAAGTTTTTTAATTTTGATGAATTTGAGATTTCTGAGTTTGTTGATAATTTTTGGGATTATGCAGCAAATTCAATGAAATACTCTCCGTAGTTTTTATTTATAATTTAATTTTGTTCTTAGTGTTGTTGGTAAATTGTAGGCTGTGTGTTTTATAAAAGATGATTCAGTGAATTATTTTCGAGTGAGTTTAAGCTTAATTTCTTCTATTTCATTGATTGTATTATTTGTCTTCCCCCCTCTTTTTGGTGATAATGTGAACTGTTATTTGTAGTCAATGGAAAGGTTGGAATTGCATTAGTGATTTGAGGTTGGTGCATATTGCAAAATTTCTTATTTTCTTCTTGATTGCCTTTTTGGTAGGCTTAGTGTTTGATAGCTAAACTTGGGGTGTCTGAGTTCGAGTTTTAATACCATCTAGTCGATTCAAATTTGACTTATTACAGAGCCAACCTAGCTAGATTGCTCGGCAGTGAGCTACGCTGTTGCTGCTCTCCAGTCTAGGAGTTAACCGAGAATTCGTTGAGACGAATCTAGTAAGACCCCACACGACTATGTTTTTTCTCAAGTATAAATCACAAAATGAAGTCAAAGGAGTTTGTGTGAATAGTTGTGTCATGTAAATAAGAACGGAGGAAGTATGACACAAAAGCTGTCTCTTGCACTGTTGCTTCATTGCCAATTATTCTGCCACCTCTTGCTTCTTTGCCAATTATTCTATCACCTAGGAAGGTTTGTGATATCAGGATGATTATCTATCTCCCATCATTTTGGCCAACCACGCAGCTTTCCACCCTCCCGAAAGCCAAAACTCCTCTCAATAGCAGTATCAAAATGAACCTCGAGTATGTTGGATAAATACTCTATCTTGCTGTTTGTCTTTTCTGAGTATTCTGATCATGTCAACGGCTTTCTTTGGTCAAGCAATTGTTGATAATCTCACTCCATGGGTGCAATTACGGGGCAGGGCAAAAGAAAATATCCATACTTGTAATGTTAGTGTATGATTTTATTCAATTTCTTTTTGGCTTTGTGATGATGCAATCAAGTTTTGTAGTACCTTAATCCCTAACCCTCACTTGTACTGAATATCAAGGCATTACATATTGAGTTATGCTGTCAATGTTCCCCTCCCCAACTGCTGACAGTTTAAATACATGGTTGCAATTATGTGGCAGGGCAAAGGAATAATCCAGACATTAAAGCTTAATGTCTTTTGATTCAATTATGTTGCAAACTTGCAATCTGTTAGAACAGGCTTATTTGTGTTTTATAGTAGTCTAAAACTCAACACAAATGTGTTGAATGTTTTATTCATGTTGATTGGGATGAAACCTGTTCCAGCGAATTGCACCATCCTCTGTCTGAGTAACGACCTTTTGGTTACCAGATGGCTGGGATGTTCTCCCTGTGAGTTTGAATATAAAAGCACTTACGCGTTGAATTCTGCTATCAATGTTGGCGTCTTTCACAACATATGTGACTACTACTACTACTACTACTACTACTACTACTACTACTACTAATACGAGTACTGCACCATTAGATAAGCACTGTCAAGCAACAAAATACGAGTACTTCATCATTTTGGAATCGAGGAGAAAACTTTGAAGAATGACTTAATTGACAATGGCAGCACCTGTTGATTGAAAGTATCAAGCGTTGGACTCTTGGTAAAAAAGAAGAATGAAACTAAACCATAATATTTCTTGCTCTTGTTTTCTTTGAAGGAAAGTCGTGAGAATCAGAAGCCTAGATTTGTTTCGTTGAACTTTGAACTTCCAATATGGTACCCAGTTTGA

mRNA sequence

GCTCCACTTCACTCAACTGCTGAAACCGCAACAATGCAACAGCAACTGCAAAACCAAAATCAAAATCAAAATCAAAATCCATGGAACTTAAGAATTCAGGCCAAGATTAATCGCCATTTTAGTCTCGATTTCAATCTCAATCTCCACACTCGCCTACCTCCTTTTTCTCTCCTCCTCGATCTCAAATTCCTAAAATCCCATATTTTCCTTTGCTCCGATTTCTCATCTTCAACTAAACCTAAAATCAGCCACAAATTTCTTCGATTTTTCAGTAAATTAATACCCAAGAAGTCCAAAATTTCACCAATTTCTTCCCAGAAACCAACAATTAAGTCGAAACTCATCCGATATCCTAGCAAATTACTGTCGAAGAAATCCAAGAAAATCCCGCCCGTTTCTTCCCTGAAAAGCGCCGTGAATTTGCAATCTTTTTGGGTCGCTTTGCTTGTTACAATGTTGGAAAGTCGTGAGAATCAGAAGCCTAGATTTGTTTCGTTGAACTTTGAACTTCCAATATGGTACCCAGTTTGA

Coding sequence (CDS)

ATGCAACAGCAACTGCAAAACCAAAATCAAAATCAAAATCAAAATCCATGGAACTTAAGAATTCAGGCCAAGATTAATCGCCATTTTAGTCTCGATTTCAATCTCAATCTCCACACTCGCCTACCTCCTTTTTCTCTCCTCCTCGATCTCAAATTCCTAAAATCCCATATTTTCCTTTGCTCCGATTTCTCATCTTCAACTAAACCTAAAATCAGCCACAAATTTCTTCGATTTTTCAGTAAATTAATACCCAAGAAGTCCAAAATTTCACCAATTTCTTCCCAGAAACCAACAATTAAGTCGAAACTCATCCGATATCCTAGCAAATTACTGTCGAAGAAATCCAAGAAAATCCCGCCCGTTTCTTCCCTGAAAAGCGCCGTGAATTTGCAATCTTTTTGGGTCGCTTTGCTTGTTACAATGTTGGAAAGTCGTGAGAATCAGAAGCCTAGATTTGTTTCGTTGAACTTTGAACTTCCAATATGGTACCCAGTTTGA

Protein sequence

MQQQLQNQNQNQNQNPWNLRIQAKINRHFSLDFNLNLHTRLPPFSLLLDLKFLKSHIFLCSDFSSSTKPKISHKFLRFFSKLIPKKSKISPISSQKPTIKSKLIRYPSKLLSKKSKKIPPVSSLKSAVNLQSFWVALLVTMLESRENQKPRFVSLNFELPIWYPV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo27136.1Spo27136.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo27136.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo27136.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo27136.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo27136.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0009414 response to water deprivation
biological_process GO:0006979 response to oxidative stress
biological_process GO:0009658 chloroplast organization
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0042742 defense response to bacterium
biological_process GO:0051083 'de novo' cotranslational protein folding
biological_process GO:0006783 heme biosynthetic process
biological_process GO:0006449 regulation of translational termination
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0000103 sulfate assimilation
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0070814 hydrogen sulfide biosynthetic process
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0006569 tryptophan catabolic process
biological_process GO:0006810 transport
biological_process GO:0009902 chloroplast relocation
biological_process GO:0009684 indoleacetic acid biosynthetic process
biological_process GO:0010207 photosystem II assembly
biological_process GO:0042793 plastid transcription
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006364 rRNA processing
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0015979 photosynthesis
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0006771 riboflavin metabolic process
biological_process GO:0019497 hexachlorocyclohexane metabolic process
biological_process GO:0016311 dephosphorylation
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0048481 plant ovule development
biological_process GO:0006457 protein folding
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0006950 response to stress
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009407 toxin catabolic process
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0006749 glutathione metabolic process
biological_process GO:0000023 maltose metabolic process
biological_process GO:0042631 cellular response to water deprivation
biological_process GO:0019760 glucosinolate metabolic process
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0005576 extracellular region
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0005829 cytosol
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005768 endosome
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005634 nucleus
cellular_component GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)
cellular_component GO:0009654 photosystem II oxygen evolving complex
cellular_component GO:0009507 chloroplast
cellular_component GO:0009349 riboflavin synthase complex
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009543 chloroplast thylakoid lumen
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0018444 translation release factor complex
cellular_component GO:0019898 extrinsic component of membrane
cellular_component GO:0005840 ribosome
molecular_function GO:0016853 isomerase activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005507 copper ion binding
molecular_function GO:0051087 chaperone binding
molecular_function GO:0004602 glutathione peroxidase activity
molecular_function GO:0004746 riboflavin synthase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0000774 adenyl-nucleotide exchange factor activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003756 protein disulfide isomerase activity
molecular_function GO:0043621 protein self-association
molecular_function GO:0004781 sulfate adenylyltransferase (ATP) activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0003747 translation release factor activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0004721 phosphoprotein phosphatase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0005215 transporter activity
molecular_function GO:0003993 acid phosphatase activity
RNA-Seq Expression