Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGGGCATCAATTCCCCTCCCACCTCCATTCAAAAATGCATCTATGAATCATCATCAACAATCCTCAAAAGTAGAGAATTCCAACAAAATAACATTATTCCTCCATTCCCTCCCCCTCAAAAAAAATGTTCATCATCATCACCAAAACCAACCATGCCACCCTTCTTCTCCTCCTCCTCCTCCTTCTACTTTCTATCTTCTCCTATGCCAATTCCTATGTCTTCATCTATGCCGGTTGCTCCCAAGTAAAATTCCAACCTTCCTCCCCTTTCGAATCCTCCATCAACTCCTTCCTCACCTCAGTCGTAAGTTCCTCTTCTCAAACCGGCCTCTACAACACCTTCACCCTCGGAAACTCCCCTTCAGACTCCACCATTTACGGCCTCTACCAATGTAGAGGAGACTTAAAACCTTCTGATTGCAATAAGTGCATCCAAAGTGCAGTCACTCAAATAGGCCTCGTATGCCCTTACTCCTACGGGGCTACCCTACAACTTGAGGGATGTTATGTTAGATACGAGAAGTTCGATTTCTTAGGAAAACCAGACAATACAGTCATGTACAAGAGGTGTAGCAGGAGTAGTAGTAATGATGGTGAGTTTTATCGTAGGAGGGATGATGTGTTGGCCACCTTACAAGGGGCTGTTGATACATCGTTTAGGGTTTCGAGTTCAGGGTCTGTCCAAGGGTTTGGGCAGTGTTTAGGGGATTTGAGTTCAAATGATTGTTCAAGTTGTTTAAGTGAGGGTGTTAAGGAGTTAAAGACACTTTGTGGTGAAGCTGCTGCTGCTCATGTTTTCTTGGCTAAGTGTTATGCTGAGTATTGGGAAGCTGGCTACTACGACTTATCTACTCAAAGTTCAGGTAACTAACTTTAACTTTGAATTCTTAATTAAATTCCGATAAATTATTTTGACACATTCACTAAAATATCAAATACGCTTTTTACGTGTGTTATACTTATATATAGGTGTGTTGAAAATAACTTATTTGTATACAATTCAAATTTAGGAGGTAAAGAGTACTACAAAGTAGTAAAATGCGGAATAATTTTTTTCATGTTGATTTGAGGGACAAAGTAGACGTGTTTTAGTGGAGTACTAGCTTTCACTTTAGTTCTTGCATTTTGTCTCTCAATTAATCATCAAGCCATCACACCTTAAGTCCACTATGGACGTTTGATTAAAAATGAAGGGAGTACTTGTTTTATTTTTTTTCATTTTAGTTCGCAGAATCTTCCATTGTTACTTATTACTCCCTCCTTCCCATGATTATAGTCCCGTTTGATTAAAAAAATACGATTTTTAGCAAAATTAAATGTAGTACATGACAAAGTGAAATAAAGTACAAATGATGATTGAGTTGTATGGAAAAGTGGAATAAAGTACATGTAAAAGAGAATATAGTACAAAGGAAAATGGAATATAGTACATGGGTAGGTTTTCAATACATTTTTTTATTAATATAGTACATGAGGAAGTGGAGACCGTGGCCAAAATTAGAAACAGGATTATAAATTTGAGACGCCCGATTTAGAAAACATGACTATAATTTTGGGACGGAGGAGTAATAAGTAATTGTAGCCAATGACGGATCTTGAGCATTTTTCTGGTGGGAATCAGTAGTATGAAAATAATTCAAATTTTAGAGGCCAGGTGTACCCAGGCCAACATGAAGAACCGCCATTGATCATACCTTTAGATTTTTACTGATTTACCTTTAAATTTTTACTGATTTGGATTATAAATGATGTGAGGATAGTTTGTACTTATATATTCTGCGATCCCTTCATTTTATTAAATTTTTAATTTTTTAGTACATTTTACTCACAAGCCAATATAAATTGCAAACAGGGAAAGGAGATTCGGATTTACCACACCTTCATTAGTTCATTTATACTTCATAGATTTATAAAGTCGATCAGCAATATCTCATGCTAACTTATATAAAAATAAACATTATTCATAAATGGAGATTATCTTTCTAGAACCATTTTAGTCATTCACCCACTGCTTGCCTTTTGATAATAGGTAAGATCGATGATAGGTGGGAGTTTCTCTTTTCATATTGGGATAATTTATATTGTCCTATAACTCATTCGCGTCAGAAAAAGAGATACTTTATAATAAGTGGTGGAGTAGTATTTTGAAAGATTAAAAAATAAAAATGGTCAAAAATCTATACTTTTGTTATAAAGTAAAGGCATCATATCAAAGAATATTGCTTTCTTTTGGTCACCTTCTATTCACTGTCTTGGTAGTTACTTTGGTGTGTAGTACCCTTTCCTTGGAGTATGATTTGTCTTAATTTGATTATTACTCCCTTTGTTTTGATCATAAACATGTACTTTTTGATTTGGTAATCATTACTTTTGCATGTTTGTGGATCATACTGCTCATCTTTGTCTAAATACTTTAACAATTAATACGGCTCCGTTCAAAATTATTTAATTACTCCCTCCGTCCCTTAATACTCGCACCGGTTTGACCGGTGCGGAGTTTAAGGCATTTGAATTGACTTATTAATTTAATGGGTCGGTGTTAGTTGATTGTGGAATATTTTTTTAATATAGTTAGTGGGAAATGTGTAAAAGGTGGGGAGTGGGGAGTAGGGGTGTGAATTTTTAAATGATTTTTTGTAGGGAATAGAGGTGTAGGTGGGGTTAGTAAGTAAGTATGAGAAATAATATAATATTTCCATTTATAGAAGCGGTGCAAGTATTAAGGGACGACCCGAAAAGAAAAACAGTGCGGGTATTAAGGGACTGAGGGAGTATATGTTACAGTAAATTCTTCATCCAGCCAAACATTCATATTACCGGTAAAGATGGCACTAACTTATTCATGGTCCGTGCTTAGGCTACATTTTTATGGAAAAACACGGCATAACATATTAAATAATCGGGTGAAATTATAGCTTAGACACGACAAAACACATTACATAATTGAGCCGGAGTAATTCTAAATATGCACTCCCTTCGTCCCTAAAAAATGTATCATAAATAATTGTCCCTATTTTATTTGTCTCGTATCTTAATTATTTAATTTGCATGACGGATTATATAAGAATGCAAGCTCTACTTTTGATGCACCAAACCCGTTGTACTAGGGGGACTAAACTAAACAAAGAGGTGACTAAAGGTGTTTATCCACTTAACAAACTTGCACCTAAGTTGATATCACCACTCACCAGACAAGAGAATATCATCATGTCCTACATTTAAATTTAGATATCATTCAATTCTGTAATACAGGCCACTTTATTTATGTGATGATCATATGATTACATTATCCTACATGATTTAATGATTGATGAAATACTCAATCTTGTTAAAATCCCAAACACATAATTAAACAAGATTAGTATTTTTAACGAGTTAAAATCTTCTATCTCACAATTTATGTACCACTTTTTTTTTTGTATACAAAGTACTCCGGTCATATTTGATCTCTATAATTGATCAACCACTTTTATTTCGAAAAGAGAATAACATGCTTGTATCTTATGTCCATAATTTTTATCACTAATTAATTAATATTCTTCCTGGAAACTTATCTTTCATCTCCTTGAATGTTTGGATGTGTGTGGGTGTATAGATCCATCGAATGATGACGAAGTTGCGAAAACAATTGCAATAATTGTTGGGATCATCGGAGGAGTTGCAGTTTTGATCGTTCTTCTCTCCGTTTGTAGAAAATCAGCTCCTGGTGGCAAATAATTACATTTGCGTTCTTTTTTTCATTTTTGTCTTCAACTCTGAATGTTATTTTTTCAAAGGAAGCTAATTAATTTCTAGATCGACCACTTCATTACTTAATTATTATCCTAAAACTTTCTTGCTCTTACTAATAATGTTCTTTTTACTATTTAAAAAATAGACCAACTAAGGTATGCACATATAGCGACTTACCTCTTCTATAATACTCGAGTGGTCGCGTGGTGAGTCTCGACGGTGAAGATGGGACAACTTATGTTATTGACACTTTAACACATTTGATTTGGAAAAAAGAACAAAGGGATAACTTGTGTTATTGACAAATTACATGATGCACAATGCATTCATCATCTGGTACGGAGTATAAAGGTAAATAATGTTCCCTTATGGGCTTATGGCCTTATCTTCTCAAAAAGGCATCAGCAGTGATTCTCTTCAATCTATCACGCGTTCGCAAATTAATCAACTAGTGATTCGAAGTCCATTGCTTTTCAGATTATTCTTGCCCGTAAATTAAAGACAGAACCAGTGATAATTAGTGGCGG AAGGGCATCAATTCCCCTCCCACCTCCATTCAAAAATGCATCTATGAATCATCATCAACAATCCTCAAAAGTAGAGAATTCCAACAAAATAACATTATTCCTCCATTCCCTCCCCCTCAAAAAAAATGTTCATCATCATCACCAAAACCAACCATGCCACCCTTCTTCTCCTCCTCCTCCTCCTTCTACTTTCTATCTTCTCCTATGCCAATTCCTATGTCTTCATCTATGCCGGTTGCTCCCAAGTAAAATTCCAACCTTCCTCCCCTTTCGAATCCTCCATCAACTCCTTCCTCACCTCAGTCGTAAGTTCCTCTTCTCAAACCGGCCTCTACAACACCTTCACCCTCGGAAACTCCCCTTCAGACTCCACCATTTACGGCCTCTACCAATGTAGAGGAGACTTAAAACCTTCTGATTGCAATAAGTGCATCCAAAGTGCAGTCACTCAAATAGGCCTCGTATGCCCTTACTCCTACGGGGCTACCCTACAACTTGAGGGATGTTATGTTAGATACGAGAAGTTCGATTTCTTAGGAAAACCAGACAATACAGTCATGTACAAGAGGTGTAGCAGGAGTAGTAGTAATGATGGTGAGTTTTATCGTAGGAGGGATGATGTGTTGGCCACCTTACAAGGGGCTGTTGATACATCGTTTAGGGTTTCGAGTTCAGGGTCTGTCCAAGGGTTTGGGCAGTGTTTAGGGGATTTGAGTTCAAATGATTGTTCAAGTTGTTTAAGTGAGGGTGTTAAGGAGTTAAAGACACTTTGTGGTGAAGCTGCTGCTGCTCATGTTTTCTTGGCTAAGTGTTATGCTGAGTATTGGGAAGCTGGCTACTACGACTTATCTACTCAAAGTTCAGATCCATCGAATGATGACGAAGTTGCGAAAACAATTGCAATAATTGTTGGGATCATCGGAGGAGTTGCAGTTTTGATCGTTCTTCTCTCCGTTTGTAGAAAATCAGCTCCTGGTGGCAAATAATTACATTTGCGTTCTTTTTTTCATTTTTGTCTTCAACTCTGAATGTTATTTTTTCAAAGGAAGCTAATTAATTTCTAGATCGACCACTTCATTACTTAATTATTATCCTAAAACTTTCTTGCTCTTACTAATAATGTTCTTTTTACTATTTAAAAAATAGACCAACTAAGGTATGCACATATAGCGACTTACCTCTTCTATAATACTCGAGTGGTCGCGTGGTGAGTCTCGACGGTGAAGATGGGACAACTTATGTTATTGACACTTTAACACATTTGATTTGGAAAAAAGAACAAAGGGATAACTTGTGTTATTGACAAATTACATGATGCACAATGCATTCATCATCTGGTACGGAGTATAAAGGTAAATAATGTTCCCTTATGGGCTTATGGCCTTATCTTCTCAAAAAGGCATCAGCAGTGATTCTCTTCAATCTATCACGCGTTCGCAAATTAATCAACTAGTGATTCGAAGTCCATTGCTTTTCAGATTATTCTTGCCCGTAAATTAAAGACAGAACCAGTGATAATTAGTGGCGG ATGTTCATCATCATCACCAAAACCAACCATGCCACCCTTCTTCTCCTCCTCCTCCTCCTTCTACTTTCTATCTTCTCCTATGCCAATTCCTATGTCTTCATCTATGCCGGTTGCTCCCAAGTAAAATTCCAACCTTCCTCCCCTTTCGAATCCTCCATCAACTCCTTCCTCACCTCAGTCGTAAGTTCCTCTTCTCAAACCGGCCTCTACAACACCTTCACCCTCGGAAACTCCCCTTCAGACTCCACCATTTACGGCCTCTACCAATGTAGAGGAGACTTAAAACCTTCTGATTGCAATAAGTGCATCCAAAGTGCAGTCACTCAAATAGGCCTCGTATGCCCTTACTCCTACGGGGCTACCCTACAACTTGAGGGATGTTATGTTAGATACGAGAAGTTCGATTTCTTAGGAAAACCAGACAATACAGTCATGTACAAGAGGTGTAGCAGGAGTAGTAGTAATGATGGTGAGTTTTATCGTAGGAGGGATGATGTGTTGGCCACCTTACAAGGGGCTGTTGATACATCGTTTAGGGTTTCGAGTTCAGGGTCTGTCCAAGGGTTTGGGCAGTGTTTAGGGGATTTGAGTTCAAATGATTGTTCAAGTTGTTTAAGTGAGGGTGTTAAGGAGTTAAAGACACTTTGTGGTGAAGCTGCTGCTGCTCATGTTTTCTTGGCTAAGTGTTATGCTGAGTATTGGGAAGCTGGCTACTACGACTTATCTACTCAAAGTTCAGATCCATCGAATGATGACGAAGTTGCGAAAACAATTGCAATAATTGTTGGGATCATCGGAGGAGTTGCAGTTTTGATCGTTCTTCTCTCCGTTTGTAGAAAATCAGCTCCTGGTGGCAAATAA MFIIITKTNHATLLLLLLLLLLSIFSYANSYVFIYAGCSQVKFQPSSPFESSINSFLTSVVSSSSQTGLYNTFTLGNSPSDSTIYGLYQCRGDLKPSDCNKCIQSAVTQIGLVCPYSYGATLQLEGCYVRYEKFDFLGKPDNTVMYKRCSRSSSNDGEFYRRRDDVLATLQGAVDTSFRVSSSGSVQGFGQCLGDLSSNDCSSCLSEGVKELKTLCGEAAAAHVFLAKCYAEYWEAGYYDLSTQSSDPSNDDEVAKTIAIIVGIIGGVAVLIVLLSVCRKSAPGGK Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo27155.1 vs. NCBI nr
Match: gi|902223692|gb|KNA19552.1| (hypothetical protein SOVF_060660 [Spinacia oleracea]) HSP 1 Score: 557.0 bits (1434), Expect = 1.900e-155 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 1
BLAST of Spo27155.1 vs. NCBI nr
Match: gi|731361144|ref|XP_010692196.1| (PREDICTED: cysteine-rich repeat secretory protein 15 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 469.2 bits (1206), Expect = 5.300e-129 Identity = 242/290 (83.45%), Postives = 263/290 (90.69%), Query Frame = 1
BLAST of Spo27155.1 vs. NCBI nr
Match: gi|703108169|ref|XP_010098939.1| (hypothetical protein L484_025595 [Morus notabilis]) HSP 1 Score: 340.5 bits (872), Expect = 2.800e-90 Identity = 173/266 (65.04%), Postives = 216/266 (81.20%), Query Frame = 1
BLAST of Spo27155.1 vs. NCBI nr
Match: gi|296089184|emb|CBI38887.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 331.3 bits (848), Expect = 1.700e-87 Identity = 177/284 (62.32%), Postives = 218/284 (76.76%), Query Frame = 1
BLAST of Spo27155.1 vs. NCBI nr
Match: gi|731421217|ref|XP_002274389.3| (PREDICTED: cysteine-rich repeat secretory protein 15 [Vitis vinifera]) HSP 1 Score: 331.3 bits (848), Expect = 1.700e-87 Identity = 177/284 (62.32%), Postives = 218/284 (76.76%), Query Frame = 1
BLAST of Spo27155.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RL22_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_060660 PE=4 SV=1) HSP 1 Score: 557.0 bits (1434), Expect = 1.300e-155 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 1
BLAST of Spo27155.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BFB6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g018780 PE=4 SV=1) HSP 1 Score: 469.2 bits (1206), Expect = 3.700e-129 Identity = 242/290 (83.45%), Postives = 263/290 (90.69%), Query Frame = 1
BLAST of Spo27155.1 vs. UniProtKB/TrEMBL
Match: W9R8R9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025595 PE=4 SV=1) HSP 1 Score: 340.5 bits (872), Expect = 2.000e-90 Identity = 173/266 (65.04%), Postives = 216/266 (81.20%), Query Frame = 1
BLAST of Spo27155.1 vs. UniProtKB/TrEMBL
Match: F6I389_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g00520 PE=4 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 1.200e-87 Identity = 177/284 (62.32%), Postives = 218/284 (76.76%), Query Frame = 1
BLAST of Spo27155.1 vs. UniProtKB/TrEMBL
Match: V4VYK0_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10024014mg PE=4 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 1.600e-87 Identity = 169/284 (59.51%), Postives = 221/284 (77.82%), Query Frame = 1
BLAST of Spo27155.1 vs. ExPASy Swiss-Prot
Match: CRR15_ARATH (Cysteine-rich repeat secretory protein 15 OS=Arabidopsis thaliana GN=CRRSP15 PE=1 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 6.600e-79 Identity = 153/275 (55.64%), Postives = 207/275 (75.27%), Query Frame = 1
BLAST of Spo27155.1 vs. ExPASy Swiss-Prot
Match: CRR12_ARATH (Cysteine-rich repeat secretory protein 12 OS=Arabidopsis thaliana GN=CRRSP12 PE=1 SV=2) HSP 1 Score: 223.0 bits (567), Expect = 4.100e-57 Identity = 126/280 (45.00%), Postives = 172/280 (61.43%), Query Frame = 1
BLAST of Spo27155.1 vs. ExPASy Swiss-Prot
Match: CRR60_ARATH (Cysteine-rich repeat secretory protein 60 OS=Arabidopsis thaliana GN=CRRSP60 PE=1 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.300e-50 Identity = 107/247 (43.32%), Postives = 148/247 (59.92%), Query Frame = 1
BLAST of Spo27155.1 vs. ExPASy Swiss-Prot
Match: CRRS2_ARATH (Cysteine-rich repeat secretory protein 2 OS=Arabidopsis thaliana GN=CRRSP2 PE=1 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 3.500e-48 Identity = 114/292 (39.04%), Postives = 171/292 (58.56%), Query Frame = 1
BLAST of Spo27155.1 vs. ExPASy Swiss-Prot
Match: CRRS3_ARATH (Cysteine-rich repeat secretory protein 3 OS=Arabidopsis thaliana GN=CRRSP3 PE=1 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 5.300e-28 Identity = 83/264 (31.44%), Postives = 127/264 (48.11%), Query Frame = 1
BLAST of Spo27155.1 vs. TAIR (Arabidopsis)
Match: AT3G60720.1 (plasmodesmata-located protein 8) HSP 1 Score: 295.4 bits (755), Expect = 3.700e-80 Identity = 153/275 (55.64%), Postives = 207/275 (75.27%), Query Frame = 1
BLAST of Spo27155.1 vs. TAIR (Arabidopsis)
Match: AT2G01660.1 (plasmodesmata-located protein 6) HSP 1 Score: 223.0 bits (567), Expect = 2.300e-58 Identity = 126/280 (45.00%), Postives = 172/280 (61.43%), Query Frame = 1
BLAST of Spo27155.1 vs. TAIR (Arabidopsis)
Match: AT5G37660.2 (plasmodesmata-located protein 7) HSP 1 Score: 201.4 bits (511), Expect = 7.300e-52 Identity = 107/247 (43.32%), Postives = 148/247 (59.92%), Query Frame = 1
BLAST of Spo27155.1 vs. TAIR (Arabidopsis)
Match: AT1G70690.1 (Receptor-like protein kinase-related family protein) HSP 1 Score: 193.4 bits (490), Expect = 2.000e-49 Identity = 114/292 (39.04%), Postives = 171/292 (58.56%), Query Frame = 1
BLAST of Spo27155.1 vs. TAIR (Arabidopsis)
Match: AT1G04520.1 (plasmodesmata-located protein 2) HSP 1 Score: 126.3 bits (316), Expect = 3.000e-29 Identity = 83/264 (31.44%), Postives = 127/264 (48.11%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo27155.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo27155.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo27155.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo27155.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
|