Spo27212 (gene)

Overview
NameSpo27212
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr4 : 84414663 .. 84422083 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCAAGATAAATGAGTTGGGATCTCTGGCTCTGCATTGTCTAAAATCCATGGCTAATGACTGGTCTGAGGTGTATTAAACAAAACCTAATCTATAGAATAGGACTGATAAAAAATGAGACAGAAACCATGACTCAGAAATAGACTAGAAAAGGGGAATAAATTCCTATTTGACTTCACTAGAATAAACCAGTACAAAGACATGTTAATAGAGACTCAGTCTAGATGTTTGTTGCAACACTCTAGACGGTTATCAGTCATATTCCAGTGCATCTATCTAAAAACAATAAAATTGGACTTTGGAAGAAGTAAACAATTTTAATAACAATGTTAGTGGGTCAAAGACAAGGATCATACGTGGTTGGCTCTTATTTTAAGTAAACTTAGTGCCCCTCACAATATTTGCACTGAAGACCAGGTATGAGAAGAGACCGAATAAACATACCATAAGCTGTCAATAATTAGTAAAAAACCACATTTGGCCTTTACAGGTTTGATATTATGAAGCATTGGACAAACTGCTAGAAAATATTTTTGCTTGAATCTAGAACTTTATTTTTGCTCAGCTTCAAGTCTAAAATCCAGAATATCCAGATTAGATCTGACTTCTAATCACACTGACACCAAGGCAGCTCGTTCATTGCACACAAGTCAAACTATACCATACTAAGCCAAAAAATATACCTTCAGAAGTCAATGGGCTTCTTGGTTTCAACAGAATATCTCATGACACCATTTTCAGCTTCAAAGTTAAAAACTCACAATACAGAGGAAACCTGAGGATACAGGCACTTACTATGTATAGCAACCATACTATGGAATTTGATACTGAGATATTATTTATTTTCTTTATTGGTATGTTTTCCCCAGCAATGTAGCAAAGAGGCACACCCATTTGGAACGATATGGACCAAGCTTCGAAATGGCATTATGTTATTTGTCAATGACTGTTATTTCTCTGCTGCAATTTGCTCCACCCAAGCAGGTAAGTACATTAACCAGTCAATTAAGCGAACTTCATAGCTCTTAAATTCAACAGCCTGAAAGTACACAATGGCTAGAATCATCTTAGAACGTTTTGTTTAATACACCTCAAACCAGTCATTATGTTGTACTCCTCGCAATTTTGGAATGATTGTACCCCAGGATTCTTATTACACTCTCTGATTGAGCATATACTTGAAACAAAGTTATAATCAGATTCTTCAGCTGACTTCAAAACCAGATATGCCTCTGCTTGCCAACTGTGATTCCAATTTGGCATCATGTCCAAATTCAAGACAATCAGTCATTCGTATGATAGTTAACAATACATGAGCACATACATTTCAGAGTTCAGACCCAGAAAGGAACAATAAGATTGAAGAGTAACAGGTACTATTTTCAATTTATAGTTTCAAAAACTTGTTGTAGCAGAGTAACAGTGTGACTAAGGTTGTCTGGGAAAGTTTAATTTTGGACTTAATTAATTTGGAAAATGAACTATATTCATGCTGAAATTGTGTTGGTACCAACATGCAAGTTATGCCTATTAGCTCAATTGGTAGACTATGTGCGATTGCACAATGATGTAGATTCGAAACCTACATAGGCAACTCTTTGTATTAACAAATCCGAATTTTAAAATTTAAAAAATGAGCAAAAATATTCGCTCATTTGTGTAAACTATATAAAATGAGCAAAAATATTTGCTCATTTATGTAAATTATAAAAAAAAAAGCAAATTTTTTAGATGTTAAATAAGATGAGATTTTAAAATATTTGCTCATTTAGACTAAATGAACAAAAGTTTTGAATATTAACAAATCCGAACTTTAATATTTAAGAAGTGAGCAAAAATATTTGCTCATTTGTGTAAACTATAAAAAATGAGCAAACATACTTGCTCATTTGTGTAAACTATAAAAAGTGAGCAAAAATATTTGTTCATTTGTGTAAACTATAAAAAATGAGCAAACATACTTGCTCATTTGTGTAAACTATAAAAAGTGAGCAAAAATATTTACTCATTTGTGTAAACTATAAAAAATGAGCAAATGTTTTGAATGTTAAGTAAGCTGAGATTTAAAAATATTTGCTCATTTAGACATAATGAGCAAAAGTTTGAATATTAACAAACCCGAACTTTAAAATTTTAAAAATGAGCAAAAATATTTGCTCATTTAGAAACGATGATTATATTGAACACACGAGATTGCTTCTCATTCTTCTCATTTTAAGTCTCCTTCTCATTTGAGTGTAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAATGAGAAGACACCTTAAAATGAGAAGAATGAGAAGGAATCAAGACCATCCAAATTAGCGGTTGAAGATTAAAACTGATTTCTTTTATTTTTCTCCCAACTTCCTCTTCCTCCCGTACTTTCATTTTCTCTCTCCTCCTAAATCATCATCCATGATGTGGCATCATAATTGCAAATCCAAAGATCCAAAAAAAATTCAATCAATGCAAATTTATCGACATATAGCTCAAATTACCATCCCATTTCCAAATGCAAGTTGTGAGCATCACCATTAGTTCAAAGGAGGGAGAAAGATGCATATTTTTTAATCAAATGTTCATTTTAATTTATTAATCAACAACCACCAATCAAATAACCGCAGCTACGGAAAAACATTATGGGTTGAGAGCTTGAAGAACGCAATAATGGCGGAAATGTTTGAGAGGTGCGTTTTTCTCATTTATTTAAAATGAGCACGAAAAAATTGCTCAATTTAAATGAGAAAAAAAATTGCTCATTGCTCATTTAGTACAAATAAGCAAACAAAATTGTTCATTTAGTACAAATGAGAAAACAAAATTCAAATGAGCACATTTAATTGAACAAAGAAGGAAATCTGACGCAGAACAGCGCAGTAATTTGGGGATTTTCCGTCGTCATTTTATTGTGTTTCTGGGTTTCATCTGGGAACAAATTGGACCCCCAATTAATTGAGAATAAAAACAACAACCACCTAGCTGCTTGGATACTTGGAGTCTGCTTCATTTTGCCTTTAATCAATTAAATTGAAATCCCTAATCAAGATTGATTTTGTGATCAATTCTACTTTGCTTGTTGTTTATTACTATTGGAAAAATGATATTATCATATTATGTGTTTATGTTTGAGAAAAGAGGAGAAAGAAATGGTACTTGAAGGTAAAGGAACATTGTAATGCTTTTTTAAAACAGAGAGAAAATAAATGGAGGAGAGAGAAATTAAAAGGAGGAGGTGGGGTATGCTTTTATGGGCCGGTTATGAGAGGTCTATAATGCTTTGTTGTTTTTACACGCGCAAATTGTGGAGCGTTTGATCGATTTATATGTACGGTCGTGATCCCTTCTCATCCTTCTCATTATAAAGATCTTCTCATTAGAGGGAAGGGCAAGGTTCCTGTGAGAACCATCTTAAGGTGAGAACTACCTTAAGGTGAGAACCAACTTCATAGTCGTTCGATCACATGAAATCTGATGGTCATTATAACCTCATATTAGTAAGGTAAATATATTTATCTTTTAATGTCGTCTCCTGCCAATCAAACAAGCTAATTAATGTCTCAAATTCTCCCGCATTGATTTTTCTCCCGAACTTTGATTCTTCAAGTGAAATTGAATTTAAAACACTTACGTTAATATCACATACTTCTCTGCACAATTTAATTACAATCCCAGAAGCCTCAGCTCAGCATATATGCATATTTACTTCAAATTATATGTACATATATCTCAAAGTATATGCATATTTAAGTAAAAATAGCACATTGAAGCAAAAATGTATGCACATTTAACTCAAAATACATGCACATATGCAAAAAAATCGAAGGCCGATAACTAAAGATGACCAAATAACACATCAAATCGAGTTCAATTATTGTCAAACTTTTAAGTGTTCATCTCTTTATTCCGGTGCAAGGAAGACAAATCAACTTCCTCTAGTGTACAAAGAAACAGCAGGAGGCATCAAAGTCGAGTTCTGCATCAACGGAGCGTTATCTTCGAGCCTTGTAAAAGGCAAGATAGTCCTCTGTGACCGTGGTTTAAATGGAAGAACCGAGAAGACATTTGTTGTAAAATCAGCAGGAGGACATGGGATGACACTTCTTAATCGTCTCATTCAAGGGGAAGAGCTTTTTGCTAACCGTATGTTCCGCCTGCCACCACATTTGGAGCTTCAGCTGCTAAGTCCATCAAAGGATACTATCTCCAAAACAAAAACTTAACAGCTATAATTTCATTTTGTGGGACAAGATATGGAACACGGGCCCCGGTGGTGGCCGCCTTCTCATCCCGAGGCCCAAGCCTTGTGGACCCCTATGTTGTAAGCCTAACATAACTGCCCTTTGGGTGAATATTTTGGATGCTTGGTATCCAGCTATTTCATCAACTGAGCTGAAAAATGATAACAGAAGAGTGCAGTTCAATATGGTCTCAGATACTTCAATGTCTTTCCCTCACCTAAGTGGAATAGCTGCATTAGTAAAATCAATCCATAAAGATTGGTCACCAGCTCCAATAAAATCCGACATTACGACATTTGCTTATACTCATGACAACAATCAACACATTATGCAACTAAATGCCCAGAATTACTTTTCCATTCCTACTGTATTGAAACTCGAGAACTTACTTGAGTAGCAAATGAAATTGTCTGAAACTTGAGAGCTTACTTGAATATGCACATATATTTAAAAGAATATGCACATATATTTAAAAGAATATGCACATATAGTTAAAAAAATATGCACATAGAATTAAAATAATATGCACATATAGTAAAAAGTCTGACCATGTAAAGCTTTGCAACACATTATGCAGTAAAAAGCTGCACATACCCTAGCTGAGGATTATTCAAGCTCTACATACCTGTAGTTTAATACAGTAGACCATACTCACACTCCCACCAGGCTTATACGGATGATTCAAAACATACAATCCTTAAACTTGTTAAGGTCTAATATACTCTAAAAAAACAAATGGACAAGAGAAAAAAGAAAAAAACTCAACCAACAATGCAAGCATAGCATAACCTACAGAAAATAAGTTATTGGAAAATAACAAAGCTTCATGATTAGAGTCTTGCCGAAATATTTATCACGAGAAAGGCCCTGGAACGTTTGCCTGAAGTAATAATAATACGTACTTTCAATATGATAAAGCAAATACAACTATACAAGAGATTGCATGTCTGTTTATTATGTCATTGTTCCTAATTAATTAATTCGCAACTCAAGAAAACACAAAAAACAGTGAGGTAATATTCTGTGGCGAATAGCAGAAGCTCCAAGAACAACTAACAGGAATCAAATTTACTACTGCTAGGATTACAAATAATTCATTGACAACTACCCACTCTTCATAAGCTCTTAGAGATGTAAATACATCAAAGTTCAAACCTTCAAAGACCAACATTTAGCAAAACAGTAAGGTGGAAGAAAGTATCAGACCTGTCAAACTTGGTGCGCCTGAAGATCACTCGAGCCCATGAATCCTCAAGCATCCATCAACATCAGCTTGAGCAAGCAAAGGACTAGCACTCGTGCCAACCCCAAATCAAAGAAAAACCAACAAAAGACACATGTAGGAATAAAATAATATGCACATATAGTTAAAAGAATATGCACATAGAGTTAAAAGAATATGCACATAGAGTTAAAAGAATATGCACATAGAGTAAAAAGTCCCATCATATAAAGCTCCAAATAACATCAGAAAAATTCCTTGATAAATGTAAAATAGAACTAAAAAACAACACAAACAGAGACATGGGAAGTTGGGAACACCAAACTCAAAATTATGCTCAACCTCGAGATAAATTGATTAACCAAAAACTCAAAAGAAAAAATTGGGTGCAATCACTAATAGCCAGTAATTTTAAATGATAATTCAATAAGGAAAAGGCAGTGAGCGATCAAAATGAGAATGAAATAAACCGAATTACATCCTGCCTAATAGGATAAAATTAAATAGAATCTAATATATATATATATATATAAAGGGGAGGTTTTTGGAGAGCATTTAGAGCGTCCACGTAGGATTTCCATGTCATCACATATAATTAACTAATATTTTATTTATTAAGAAATAAATAAATAATATTAGAGTCTTGTCACGATTAAATTGGTAGATAATATGATAAAGATAGATTCCAACAAAAAATTATCCTATTTCTCTTCTACTTTTTGTATATAAGCTTTTGGCCACAAAAACTCACAGGTCACATAGGTTGCCTAACATTATACGGAATATAGTTATATGTATATCATCACGAATAAAGTAAACCACTATTTGTTTATCTGTTGACCGATATTGGTAAAAAAAAAAATGCTTCTCTAATTACTGACATTACCTTGCAGATATGATGGATTACACCATGGTTCAAGCTTCTTGGAGCACCTAAACTTTTTGTATGCCATCATAAACAAAGGCACACAGGCGTCTGAGATGGATTTGATAGACGGGCTGATTTTGGTGGCAATTGGAGTCGCTGCGAATGGAAGAGGTCTTGAAATGATTTTGAGATTTTGAGGTCGCTGCATAATCATCGGTTTGTATATAAGATTTTGAGATTTTGATGAATCTACCAAGTTTGATTATCAAAACATAAAGTTTTATGATCGATTCTAGGTAATCTAGATCTAGCTATACATATATACTCTTTTCCTTGCGTTACAAACAAAATATACAATATGTAATTTGGTTTGATACTTCTAAACTACGTACTTTGTCAATGTGTTTTGAAGTAGTAATTTTATCACTTTAAAAAGCACGAGTATTTAGCTATCATCACATAATTACTTTTATATGGATCTGTTATCCATTCTTATATCTAATTTGTCC

mRNA sequence

ATGTTCAAGATAAATGAGTTGGGATCTCTGGCTCTGCATTGTCTAAAATCCATGGCTAATGACTGGTCTGAGCAATGTAGCAAAGAGGCACACCCATTTGGAACGATATGGACCAAGCTTCGAAATGGCATTATGTTATTTGTCAATGACTGTTATTTCTCTGCTGCAATTTGCTCCACCCAAGCAGGTAAGTACATTAACCAGTCAATTAAGCGAACTTCATAGCTCTTAAATTCAACAGCCTGAAAGTACACAATGGCTAGAATCATCTTAGAACGTTTTGTTTAATACACCTCAAACCAGTCATTATGTTGTACTCCTCGCAATTTTGGAATGATTGTACCCCAGGATTCTTATTACACTCTCTGATTGAGCATATACTTGAAACAAAGTTATAATCAGATTCTTCAGCTGACTTCAAAACCAGATATGCCTCTGCTTGCCAACTGTGATTCCAATTTGGCATCATGTCCAAATTCAAGACAATCAGTCATTCGTATGATAGTTAACAATACATGAGCACATACATTTCAGAGTTCAGACCCAGAAAGGAACAATAAGATTGAAGAGTAACAGATATGATGGATTACACCATGGTTCAAGCTTCTTGGAGCACCTAAACTTTTTGTATGCCATCATAAACAAAGGCACACAGGCGTCTGAGATGGATTTGATAGACGGGCTGATTTTGGTGGCAATTGGAGTCGCTGCGAATGGAAGAGGTCTTGAAATGATTTTGAGATTTTGAGGTCGCTGCATAATCATCGGTTTGTATATAAGATTTTGAGATTTTGATGAATCTACCAAGTTTGATTATCAAAACATAAAGTTTTATGATCGATTCTAGGTAATCTAGATCTAGCTATACATATATACTCTTTTCCTTGCGTTACAAACAAAATATACAATATGTAATTTGGTTTGATACTTCTAAACTACGTACTTTGTCAATGTGTTTTGAAGTAGTAATTTTATCACTTTAAAAAGCACGAGTATTTAGCTATCATCACATAATTACTTTTATATGGATCTGTTATCCATTCTTATATCTAATTTGTCC

Coding sequence (CDS)

ATGTTCAAGATAAATGAGTTGGGATCTCTGGCTCTGCATTGTCTAAAATCCATGGCTAATGACTGGTCTGAGCAATGTAGCAAAGAGGCACACCCATTTGGAACGATATGGACCAAGCTTCGAAATGGCATTATGTTATTTGTCAATGACTGTTATTTCTCTGCTGCAATTTGCTCCACCCAAGCAGGTAAGTACATTAACCAGTCAATTAAGCGAACTTCATAG

Protein sequence

MFKINELGSLALHCLKSMANDWSEQCSKEAHPFGTIWTKLRNGIMLFVNDCYFSAAICSTQAGKYINQSIKRTS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo27212.1Spo27212.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo27212.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo27212.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo27212.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo27212.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043622 cortical microtubule organization
biological_process GO:0008152 metabolic process
biological_process GO:0051013 microtubule severing
biological_process GO:0009825 multidimensional cell growth
biological_process GO:0009832 plant-type cell wall biogenesis
biological_process GO:0010091 trichome branching
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005874 microtubule
cellular_component GO:0005634 nucleus
cellular_component GO:0045298 tubulin complex
molecular_function GO:0005524 ATP binding
molecular_function GO:0008017 microtubule binding
molecular_function GO:0008568 microtubule-severing ATPase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
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