Spo27239 (gene)

Overview
NameSpo27239
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionU3 small nucleolar RNA-associated protein 11
LocationSpoScf_00998 : 32190 .. 36509 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCTATAAGAAATGCAATCTCGAAGAGAGCATATAAGGAGCGATCGCAACCGTAAGCCTACTTATTAAGTTCGTCTTTTTATTTGCTTTGTTTTCTAAATCCTTTTTTCCTAATTTTAATTTTCGTTTTTGTTTCTTGTTATGGATTCAGGGATTCAAGGAAAAAGTTTGGGATCCTTGAAAAGAAAAAGGACTATGACATCCGTGCAAAAGAATACCACAAAAAGGAGGATACATTACGGGTAAAGTTTTCATGTCTAGTTCCTTTTACTTGTTGAACCTTTGAATGTTTTTCTATCACCTTTGTTTTAGAAGTTGTGATCTTGATTGATTCCGGTTTGGATATTTTTTTCCAGAGACTCAAAGAAAAGGCAGCGAATAGGAACCCTGATGAATTTTATTTTGGCATGATCAGATCTAACACAACTAATGGAGTTCATAGACCGGAGTAAGACATGTTCTTGTTTTGAGAAATGCCGTGTTCATAATGGTTTTTGGCGTTCTACTTTTAACCCTCTAGTACACCTTTTTTTTTCTATTTTTTAAAATCAAACTTTTCGATAAAAAAAAGCTTATAAATCATAATGGTTATGATCTCACCATCACTCATTTGTGATGCTTATTTGATTATTACCATTGCTTAATGTTCCTTTAGCTGTCATTGATTTGATTTTCTATAACCATAGGAGCGAGGCAAACAAGTATTCACCAGAAGAACTTTTGTTGATGAAGACACAAGACAGAGGATATGTGCTTCAGAAAATTCTAAGTGAAAAGAAGGAAATTACTTATAGCTTAGTATTTCTGATATTATATATTTGTTGTGAAAGCGATACAAACGTTTGCTTATTTTTCATTGTTGTTTTACTGTGTATACATTGCTGACACCATGTCCTCTCTGTTTACAGAAAGTGGAAAAGCGTAGAGCTGTGCTTCATTCTTTAGATAATCGACCCTCGATCAAACACGTTTATTTTGCAGAAGACAGGTTTGTCTTTCAAACTTCGAGATTAAAGAGGCGTGGAGCTGTGGAGACTTAGCCTTCCCCTTCTCCTTCTCTCTCTATTTCTTATTGTGTTGATTGTACGATGGTAGAACTGTTTTCTCGTTCAATTTTCCTCCTATTCTTTTCTCCTCGGTCATCACTATATACAAAATAATTTTTTTTCCCTTTGCAAGGCATAAGGCCATGAGCTTGACATAGGGGAGCCTTATGCTTGTTTACCTTACCTTTTTAAAAGAAACATATACGAAATGTTTTGGTGCTTGTGATTTGAAATGCTTCTGCATTTTTGTTGCCTTTTCCCCAAGTGACAAAAGGAAATTGCTAACTTAAGAGCTCTAATTGAGGTATCCGGAAACCTTTTGTTAAACAGTGAAGAGGCAAAAGAGATACAATCAAGATCCTCAAGGGATGCAGAGCTTCGTACATCAGGGTCTGTACCTTCTGCTATCATGAGGTAAAAGGCTATTTATAAAAAAAAAACGTTTCTTACTTATTTTGGCATTTTTAGTCCTTCGATTTTCCTTTTTCTCCTTTTTCTGAAGCAAGCTTGAGATAGGGAGCCTTGTGTTTGTTTACCTTACCTTTTCAAAAGAAACATATACAAAATGTTATAGTGCTTGTGATTTGAAATGCTTCTACAATTTGGTTGCCTTTTTCAAAGTGACAAAGGGCAAGTCCTTCGTTTTTCATTGTTCTCTCTTTTGCTGATGCAAGAGGATTGATTTTCTCAGTTTAATAAATTTGTTTCTTTGCCTGATTTTTAACAAAAAAGTTTGCATATTAAGCTGTCTTAGATTGAGTAAAAATGATGTAATACCCTGTTGGTCTTGAATCTTAATCTCTTGGAATACTGAAGGACCTATCTTACGAAGTTTTCAATTTTAGGACCTTATTTAAATAAGTTTGAGGTCCTATAAGTTCAGATAAGCTTAAATAAGGCCATATAAGCTAAATAAGGTCTTATAAGTTTCAATAAATTACTGTAAGTTGAAGACCCTAAACATTCTGTCTTACGTCATCTGGAACTTCCGAATGTTTGAACATTGTTGTGGCTTAATTAGGAGACCCGGCGAGGTTTTGCTGAAGCCTAAAGATATCGTCCCCAATACACAACAGTACAACACCACATTATCTCCACTTTGCATTGAAAAAACTAGGTCGCTTTTCTAGAACATGAATTGAAGTTCAGAGTTTTTAAACTAATCTGCAATTATTTATTGATTTTAAAATTAGGGGTTTATAGATTTTGTCTTGAATTTTTTCCCTTTAGCTGTTGGATTTTGTTTTAATTGTTTTACTTGGTGGATTCCTTGTTCAGTTTTTGATAAGAAAATTTCTGAATTCTGATTCAACCTCAGTAGTTGATGCTGATGGCTCAGTATTTTAATTATCACAATTCTGTGATCTTTAAAGCAAATTTAGAAAGTTAGATTGTGGGTAGTAGTATTATAATGATCTCTTTTGTTTCTTTCTATGTTACTCCGACACTTCTTCCAGCGGCGGGTGTCGGTGTCGACACGACCCGACCCGCGACACGACACCCGACACGTGTCCGGGGAGGTGTCGACACCAATGTCGGAAAAGAGTCCAAAATATAGTGTCGGCGCCGGTGTCGGAAAAGAAATTGAGTAAAAAAATCAAAACCCTCGATCTAGAAATTGAAGGTCGGGGAAGACGATTAAGAAAAAAATATATTGGGGCTTTTGTTGTAGAAGAAAAAACGAGTTGAAAGCATTCTTCGATCCTTGTTTTCATGACTGCTTGAGAATCGCCATTGTTTCCGGCGTCTTCTTCCTCCTCGTGTTCATGTTTTGCGTCTGTTTTAAGGTGGTGGGCTATCATCTTCGGGTTCGTGGTTTATGGTACAAGGTTTGTTCTCACTTTTGGGTTATGATATCATGTTTAAAAAAGTTAAAAAAAAGAAAAGTTAAAAGAAAGAAATTCATATAGTGGGATATCACGTGGTAATTTTAGAATAGTCTAGGACTCTAGGGTGTTACTGTTGGGAGTGGGTCTGTCAGCTTTTTATTATATATTTATGTTTACTTCCCTTTTTTTTAAGGATATTTATATGTTTACTTTTGAACTCTTTGTATTCTTAAACTCTTTCAAAGACTATTTATCTTATTTTGTAATTTTAATTTTATTATTTATTAATATTCTAATCTTTATCTTTTTTTTTTAATTTAAAAATTATATTTTTATAAAAAGTGTCGATGTTTTTTCCGACACTTTGTAAGGCAGCCGTGTCTAAAAAACAAGTCAAGACACTCCTTTGACCGTGTCGGAGTGTCTGCAAATATTTGGATCGGGGTGTCGGATAATCCGACACCCGTGTCTGAGTAACATAGGTTTCTTTCTTGTGCGTTTTGAACTGTTGTTTCCTTTTATATCTACTCATTTTATTATTTATTTTGAGCAGGAAGATGAAAGCTTCCTACAAAGAGTTGGAGGCAAGAAAGAAAAGAGTTGAAGATTTGGAGAGAGTCTATGCAGAGATGGCCTTGCAGAAAGAGCTACAGGTACCAATTCAAGCTTAACAACATCTAAATTACCTGCCCATCAATTCTGATTATATTTCCATAGAGAGTAGAGTTGATGCCAGACGTTCTTTAGCCCCAATTTTACTGTACCTTTGATTGTAGATGCCCATTATCAACGAGTATCTGATTTAGTTTACTGAGCTGTTCTATTGAAGGGTTCAATATGTAGCGTTATTTTAATTTTTATTTGGCATTTAAATCAGTACTTACCAGAGCATCTGATAGAATTACAGTTGATATTAGAAATTTACTGTCTAATTTAGACTAAAGTCTGCCTCAAATGTCCGTTGAGCTGTATTTAGTCATCATGTGGCTACATTCTATGTTTATTTTGTTCTGAGTTTTTATCTTTGTGTTGATGCAGAAGAAGGGTAGGAAACGCAAGCTACGGGAAGATGAGATTGTTTCTCCCACCGGTAGGCCAGTTTACAAGTGGCGGGCAGAACGTAAACGATAAATATACGAAGTATTTTATAATATATGGTTTGTAATGTTAACAGATAACTAGCCCTTTGACCCGTTCGATGAACGGGTAAATTATAAAAAAAATTGATTATTTGATCTTCACAAATTGAATAGGTTATTTAGGAGTTATTAACCATATCTACTCCATCTTTCACATTGGATAATCCACCCATTTTGTCACTCTTTAAAAAAAAATACTACTTGAGGCCTTGGATATCATTTCGAATTTCTAACCCATATTATACTTCATATGCATTATGCGCGCAATAACATATCAAAGAGTTTATCTTCCTCGACCAAAC

mRNA sequence

ATGTCTTCTATAAGAAATGCAATCTCGAAGAGAGCATATAAGGAGCGATCGCAACCGGATTCAAGGAAAAAGTTTGGGATCCTTGAAAAGAAAAAGGACTATGACATCCGTGCAAAAGAATACCACAAAAAGGAGGATACATTACGGAGACTCAAAGAAAAGGCAGCGAATAGGAACCCTGATGAATTTTATTTTGGCATGATCAGATCTAACACAACTAATGGAGTTCATAGACCGGAGAGCGAGGCAAACAAGTATTCACCAGAAGAACTTTTGTTGATGAAGACACAAGACAGAGGATATGTGCTTCAGAAAATTCTAAGTGAAAAGAAGGAAATTACTTATAGCTTAAAAGTGGAAAAGCGTAGAGCTGTGCTTCATTCTTTAGATAATCGACCCTCGATCAAACACGTTTATTTTGCAGAAGACAGTGAAGAGGCAAAAGAGATACAATCAAGATCCTCAAGGGATGCAGAGCTTCGTACATCAGGGTCTGTACCTTCTGCTATCATGAGGAAGATGAAAGCTTCCTACAAAGAGTTGGAGGCAAGAAAGAAAAGAGTTGAAGATTTGGAGAGAGTCTATGCAGAGATGGCCTTGCAGAAAGAGCTACAGAAGAAGGGTAGGAAACGCAAGCTACGGGAAGATGAGATTGTTTCTCCCACCGGTAGGCCAGTTTACAAGTGGCGGGCAGAACGTAAACGATAAATATACGAAGTATTTTATAATATATGGTTTGTAATGTTAACAGATAACTAGCCCTTTGACCCGTTCGATGAACGGGTAAATTATAAAAAAAATTGATTATTTGATCTTCACAAATTGAATAGGTTATTTAGGAGTTATTAACCATATCTACTCCATCTTTCACATTGGATAATCCACCCATTTTGTCACTCTTTAAAAAAAAATACTACTTGAGGCCTTGGATATCATTTCGAATTTCTAACCCATATTATACTTCATATGCATTATGCGCGCAATAACATATCAAAGAGTTTATCTTCCTCGACCAAAC

Coding sequence (CDS)

ATGTCTTCTATAAGAAATGCAATCTCGAAGAGAGCATATAAGGAGCGATCGCAACCGGATTCAAGGAAAAAGTTTGGGATCCTTGAAAAGAAAAAGGACTATGACATCCGTGCAAAAGAATACCACAAAAAGGAGGATACATTACGGAGACTCAAAGAAAAGGCAGCGAATAGGAACCCTGATGAATTTTATTTTGGCATGATCAGATCTAACACAACTAATGGAGTTCATAGACCGGAGAGCGAGGCAAACAAGTATTCACCAGAAGAACTTTTGTTGATGAAGACACAAGACAGAGGATATGTGCTTCAGAAAATTCTAAGTGAAAAGAAGGAAATTACTTATAGCTTAAAAGTGGAAAAGCGTAGAGCTGTGCTTCATTCTTTAGATAATCGACCCTCGATCAAACACGTTTATTTTGCAGAAGACAGTGAAGAGGCAAAAGAGATACAATCAAGATCCTCAAGGGATGCAGAGCTTCGTACATCAGGGTCTGTACCTTCTGCTATCATGAGGAAGATGAAAGCTTCCTACAAAGAGTTGGAGGCAAGAAAGAAAAGAGTTGAAGATTTGGAGAGAGTCTATGCAGAGATGGCCTTGCAGAAAGAGCTACAGAAGAAGGGTAGGAAACGCAAGCTACGGGAAGATGAGATTGTTTCTCCCACCGGTAGGCCAGTTTACAAGTGGCGGGCAGAACGTAAACGATAA

Protein sequence

MSSIRNAISKRAYKERSQPDSRKKFGILEKKKDYDIRAKEYHKKEDTLRRLKEKAANRNPDEFYFGMIRSNTTNGVHRPESEANKYSPEELLLMKTQDRGYVLQKILSEKKEITYSLKVEKRRAVLHSLDNRPSIKHVYFAEDSEEAKEIQSRSSRDAELRTSGSVPSAIMRKMKASYKELEARKKRVEDLERVYAEMALQKELQKKGRKRKLREDEIVSPTGRPVYKWRAERKR
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo27239.1Spo27239.1mRNA


Homology
[Close]
BLAST of Spo27239.1 vs. NCBI nr
Match: gi|902228973|gb|KNA21338.1| (hypothetical protein SOVF_043690 [Spinacia oleracea])

HSP 1 Score: 438.7 bits (1127), Expect = 6.300e-120
Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 1 

		  

Query: 1   MSSIRNAISKRAYKERSQPDSRKKFGILEKKKDYDIRAKEYHKKEDTLRRLKEKAANRNP 60
           MSSIRNAISKRAYKERSQPDSRKKFGILEKKKDYDIRAKEYHKKEDTLRRLKEKAANRNP
Sbjct: 1   MSSIRNAISKRAYKERSQPDSRKKFGILEKKKDYDIRAKEYHKKEDTLRRLKEKAANRNP 60

Query: 61  DEFYFGMIRSNTTNGVHRPESEANKYSPEELLLMKTQDRGYVLQKILSEKKEITYSLKVE 120
           DEFYFGMIRSNTTNGVHRPESEANKYSPEELLLMKTQDRGYVLQKILSEKKE TYSLKVE
Sbjct: 61  DEFYFGMIRSNTTNGVHRPESEANKYSPEELLLMKTQDRGYVLQKILSEKKENTYSLKVE 120

Query: 121 KRRAVLHSLDNRPSIKHVYFAEDSEEAKEIQSRSSRDAELRTSGSVPSAIMRKMKASYKE 180
           KRRAVLHSLDNRPSIKHVYFAEDSEEAKEIQSRSSRDAELRTSGSVPSAIMRKMKASYKE
Sbjct: 121 KRRAVLHSLDNRPSIKHVYFAEDSEEAKEIQSRSSRDAELRTSGSVPSAIMRKMKASYKE 180

Query: 181 LEARKKRVEDLERVYAEMALQKELQKKGRKRKLREDEIVSPTGRPVYKWRAERKR 236
           LEARKKRVEDLERVYAEMALQKELQKKGRKRKLREDEIVSPTGRPVYKWRAERKR
Sbjct: 181 LEARKKRVEDLERVYAEMALQKELQKKGRKRKLREDEIVSPTGRPVYKWRAERKR 235
[Close]
BLAST of Spo27239.1 vs. NCBI nr
Match: gi|902205061|gb|KNA15071.1| (hypothetical protein SOVF_101440 [Spinacia oleracea])

HSP 1 Score: 360.1 bits (923), Expect = 2.800e-96
Identity = 193/204 (94.61%), Postives = 197/204 (96.57%), Query Frame = 1 

		  

Query: 1   MSSIRNAISKRAYKERSQPDSRKKFGILEKKKDYDIRAKEYHKKEDTLRRLKEKAANRNP 60
           MSSIRNAISKRAYKERSQPDSRKKFGILEKKKDYDIRAKEYHKKEDTLRRLKEKAANRNP
Sbjct: 1   MSSIRNAISKRAYKERSQPDSRKKFGILEKKKDYDIRAKEYHKKEDTLRRLKEKAANRNP 60

Query: 61  DEFYFGMIRSNTTNGVHRPESEANKYSPEELLLMKTQDRGYVLQKILSEKKEITYSLKVE 120
           DEFYFGMIRSNT NGVHRPESEANK++PEELLLMKTQDRGYVLQKILSEKKEITYSLKVE
Sbjct: 61  DEFYFGMIRSNTINGVHRPESEANKHTPEELLLMKTQDRGYVLQKILSEKKEITYSLKVE 120

Query: 121 KRRAVLHSLDNRPSIKHVYFAEDSEEAKEIQSRSSRDAELRTSGSVPSAIMRKMKASYKE 180
           K RAVLHS DNRPS KHVYFAEDSEEAKEIQS+SSRD ELRTSGSVPSAIMRKMKASYKE
Sbjct: 121 KLRAVLHSSDNRPSSKHVYFAEDSEEAKEIQSKSSRDGELRTSGSVPSAIMRKMKASYKE 180

Query: 181 LEARKKRVEDLERVYAEMALQKEL 205
           LEAR+KRVEDLERVYAEMAL K L
Sbjct: 181 LEAREKRVEDLERVYAEMALXKHL 204
[Close]
BLAST of Spo27239.1 vs. NCBI nr
Match: gi|731355545|ref|XP_010689199.1| (PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 349.0 bits (894), Expect = 6.600e-93
Identity = 191/235 (81.28%), Postives = 204/235 (86.81%), Query Frame = 1 

		  

Query: 1   MSSIRNAISKRAYKERSQPDSRKKFGILEKKKDYDIRAKEYHKKEDTLRRLKEKAANRNP 60
           MSSIRNAISKRAYKERSQP SRKKFG LEK KDY IRA+E+HKKEDTLRRLKEKAANRNP
Sbjct: 1   MSSIRNAISKRAYKERSQPSSRKKFGFLEKHKDYVIRAREFHKKEDTLRRLKEKAANRNP 60

Query: 61  DEFYFGMIRSNTTNGVHRPESEANKYSPEELLLMKTQDRGYVLQKILSEKKEITYSLKVE 120
           DEFYF MIR+ T NGVHRPE+EANKY+PEELLLMKTQD GYVLQKI SEKK      KVE
Sbjct: 61  DEFYFRMIRTKTVNGVHRPENEANKYTPEELLLMKTQDIGYVLQKIQSEKK------KVE 120

Query: 121 KRRAVLHSLDNRPSIKHVYFAEDSEEAKEIQSRSSRDAELRTSGSVPSAIMRKMKASYKE 180
           K +A+LHSLD RPS KH+Y+AEDSEEA EIQSRSS   ELRTSGSVP AI RK  ASY+E
Sbjct: 121 KLKAILHSLDIRPSSKHIYYAEDSEEANEIQSRSSDKDELRTSGSVPYAIKRKTDASYRE 180

Query: 181 LEARKKRVEDLERVYAEMALQKELQKKGRKRKLREDEIVSPTGRPVYKWRAERKR 236
           LEAR KR+EDLE+V+AEMALQKELQKKGRKRKLREDEIV PT R VYKWR ERKR
Sbjct: 181 LEARMKRIEDLEKVHAEMALQKELQKKGRKRKLREDEIVCPTSRSVYKWRTERKR 229
[Close]
BLAST of Spo27239.1 vs. NCBI nr
Match: gi|731313969|ref|XP_010683417.1| (PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 343.2 bits (879), Expect = 3.600e-91
Identity = 189/235 (80.43%), Postives = 202/235 (85.96%), Query Frame = 1 

		  

Query: 1   MSSIRNAISKRAYKERSQPDSRKKFGILEKKKDYDIRAKEYHKKEDTLRRLKEKAANRNP 60
           MSSIRNAISKRAYKERSQP SRKKFG LEK KDY IRA+E+HKKEDTLRRLKEKAANRNP
Sbjct: 1   MSSIRNAISKRAYKERSQPASRKKFGFLEKHKDYVIRAREFHKKEDTLRRLKEKAANRNP 60

Query: 61  DEFYFGMIRSNTTNGVHRPESEANKYSPEELLLMKTQDRGYVLQKILSEKKEITYSLKVE 120
           DEFYF MIR+ T NGVHRPESEANKY+PEELLLMKTQD GYVLQKI SEKK      KV 
Sbjct: 61  DEFYFRMIRTKTVNGVHRPESEANKYTPEELLLMKTQDIGYVLQKIQSEKK------KVG 120

Query: 121 KRRAVLHSLDNRPSIKHVYFAEDSEEAKEIQSRSSRDAELRTSGSVPSAIMRKMKASYKE 180
           K +A+LHSLD RP  KH+Y+AEDSEEA EIQSRSS+  EL TSGSVP AI RK  ASY+E
Sbjct: 121 KLKAILHSLDIRPLSKHIYYAEDSEEANEIQSRSSKKDELPTSGSVPYAIKRKTDASYRE 180

Query: 181 LEARKKRVEDLERVYAEMALQKELQKKGRKRKLREDEIVSPTGRPVYKWRAERKR 236
           LEAR KR+EDLE+V+AEMALQKELQKKGRKRKLREDEIV PT R VYKWR ERKR
Sbjct: 181 LEARMKRIEDLEKVHAEMALQKELQKKGRKRKLREDEIVCPTSRSVYKWRTERKR 229
[Close]
BLAST of Spo27239.1 vs. NCBI nr
Match: gi|224137520|ref|XP_002322578.1| (U3 small nucleolar RNA-associated protein 11 [Populus trichocarpa])

HSP 1 Score: 309.3 bits (791), Expect = 5.800e-81
Identity = 165/235 (70.21%), Postives = 193/235 (82.13%), Query Frame = 1 

		  

Query: 1   MSSIRNAISKRAYKERSQPDSRKKFGILEKKKDYDIRAKEYHKKEDTLRRLKEKAANRNP 60
           MSS+RNAI ++A+KER+QP +RKKFG+LEK KDY  RAK +HKKE+TLRRLKEKAA+RNP
Sbjct: 1   MSSLRNAIPRKAHKERAQPQARKKFGLLEKHKDYVARAKAFHKKEETLRRLKEKAASRNP 60

Query: 61  DEFYFGMIRSNTTNGVHRPESEANKYSPEELLLMKTQDRGYVLQKILSEKKEITYSLKVE 120
           DEFYFGMI+S T +GVHRP+SEANKY+ EELLLMKTQD GY+LQK  SEKK      K+E
Sbjct: 61  DEFYFGMIKSKTVDGVHRPQSEANKYTQEELLLMKTQDIGYILQKAQSEKK------KIE 120

Query: 121 KRRAVLHSLDNRPSIKHVYFAEDSEEAKEIQSRSSRDAELRTSGSVPSAIMRKMKASYKE 180
           K  A LHSLD RPS KH+YFAED EEAKEI+SRSS +    TS  VP  I RK+ +SY+E
Sbjct: 121 KLTATLHSLDGRPSSKHIYFAEDREEAKEIRSRSSENKMATTSVDVPDNIKRKIASSYRE 180

Query: 181 LEARKKRVEDLERVYAEMALQKELQKKGRKRKLREDEIVSPTGRPVYKWRAERKR 236
           LEARK R   LE++Y +MALQKELQKKGRKRKLREDEIV PT +PV+KWR+ERKR
Sbjct: 181 LEARKNRANQLEKIYMDMALQKELQKKGRKRKLREDEIVCPTTKPVFKWRSERKR 229
[Close]
BLAST of Spo27239.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RPD4_SPIOL (U3 small nucleolar RNA-associated protein 11 OS=Spinacia oleracea GN=SOVF_043690 PE=3 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 4.400e-120
Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 1 

		  

Query: 1   MSSIRNAISKRAYKERSQPDSRKKFGILEKKKDYDIRAKEYHKKEDTLRRLKEKAANRNP 60
           MSSIRNAISKRAYKERSQPDSRKKFGILEKKKDYDIRAKEYHKKEDTLRRLKEKAANRNP
Sbjct: 1   MSSIRNAISKRAYKERSQPDSRKKFGILEKKKDYDIRAKEYHKKEDTLRRLKEKAANRNP 60

Query: 61  DEFYFGMIRSNTTNGVHRPESEANKYSPEELLLMKTQDRGYVLQKILSEKKEITYSLKVE 120
           DEFYFGMIRSNTTNGVHRPESEANKYSPEELLLMKTQDRGYVLQKILSEKKE TYSLKVE
Sbjct: 61  DEFYFGMIRSNTTNGVHRPESEANKYSPEELLLMKTQDRGYVLQKILSEKKENTYSLKVE 120

Query: 121 KRRAVLHSLDNRPSIKHVYFAEDSEEAKEIQSRSSRDAELRTSGSVPSAIMRKMKASYKE 180
           KRRAVLHSLDNRPSIKHVYFAEDSEEAKEIQSRSSRDAELRTSGSVPSAIMRKMKASYKE
Sbjct: 121 KRRAVLHSLDNRPSIKHVYFAEDSEEAKEIQSRSSRDAELRTSGSVPSAIMRKMKASYKE 180

Query: 181 LEARKKRVEDLERVYAEMALQKELQKKGRKRKLREDEIVSPTGRPVYKWRAERKR 236
           LEARKKRVEDLERVYAEMALQKELQKKGRKRKLREDEIVSPTGRPVYKWRAERKR
Sbjct: 181 LEARKKRVEDLERVYAEMALQKELQKKGRKRKLREDEIVSPTGRPVYKWRAERKR 235
[Close]
BLAST of Spo27239.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R6D6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_101440 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 2.000e-96
Identity = 193/204 (94.61%), Postives = 197/204 (96.57%), Query Frame = 1 

		  

Query: 1   MSSIRNAISKRAYKERSQPDSRKKFGILEKKKDYDIRAKEYHKKEDTLRRLKEKAANRNP 60
           MSSIRNAISKRAYKERSQPDSRKKFGILEKKKDYDIRAKEYHKKEDTLRRLKEKAANRNP
Sbjct: 1   MSSIRNAISKRAYKERSQPDSRKKFGILEKKKDYDIRAKEYHKKEDTLRRLKEKAANRNP 60

Query: 61  DEFYFGMIRSNTTNGVHRPESEANKYSPEELLLMKTQDRGYVLQKILSEKKEITYSLKVE 120
           DEFYFGMIRSNT NGVHRPESEANK++PEELLLMKTQDRGYVLQKILSEKKEITYSLKVE
Sbjct: 61  DEFYFGMIRSNTINGVHRPESEANKHTPEELLLMKTQDRGYVLQKILSEKKEITYSLKVE 120

Query: 121 KRRAVLHSLDNRPSIKHVYFAEDSEEAKEIQSRSSRDAELRTSGSVPSAIMRKMKASYKE 180
           K RAVLHS DNRPS KHVYFAEDSEEAKEIQS+SSRD ELRTSGSVPSAIMRKMKASYKE
Sbjct: 121 KLRAVLHSSDNRPSSKHVYFAEDSEEAKEIQSKSSRDGELRTSGSVPSAIMRKMKASYKE 180

Query: 181 LEARKKRVEDLERVYAEMALQKEL 205
           LEAR+KRVEDLERVYAEMAL K L
Sbjct: 181 LEAREKRVEDLERVYAEMALXKHL 204
[Close]
BLAST of Spo27239.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BLJ2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g205930 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 4.600e-93
Identity = 191/235 (81.28%), Postives = 204/235 (86.81%), Query Frame = 1 

		  

Query: 1   MSSIRNAISKRAYKERSQPDSRKKFGILEKKKDYDIRAKEYHKKEDTLRRLKEKAANRNP 60
           MSSIRNAISKRAYKERSQP SRKKFG LEK KDY IRA+E+HKKEDTLRRLKEKAANRNP
Sbjct: 1   MSSIRNAISKRAYKERSQPSSRKKFGFLEKHKDYVIRAREFHKKEDTLRRLKEKAANRNP 60

Query: 61  DEFYFGMIRSNTTNGVHRPESEANKYSPEELLLMKTQDRGYVLQKILSEKKEITYSLKVE 120
           DEFYF MIR+ T NGVHRPE+EANKY+PEELLLMKTQD GYVLQKI SEKK      KVE
Sbjct: 61  DEFYFRMIRTKTVNGVHRPENEANKYTPEELLLMKTQDIGYVLQKIQSEKK------KVE 120

Query: 121 KRRAVLHSLDNRPSIKHVYFAEDSEEAKEIQSRSSRDAELRTSGSVPSAIMRKMKASYKE 180
           K +A+LHSLD RPS KH+Y+AEDSEEA EIQSRSS   ELRTSGSVP AI RK  ASY+E
Sbjct: 121 KLKAILHSLDIRPSSKHIYYAEDSEEANEIQSRSSDKDELRTSGSVPYAIKRKTDASYRE 180

Query: 181 LEARKKRVEDLERVYAEMALQKELQKKGRKRKLREDEIVSPTGRPVYKWRAERKR 236
           LEAR KR+EDLE+V+AEMALQKELQKKGRKRKLREDEIV PT R VYKWR ERKR
Sbjct: 181 LEARMKRIEDLEKVHAEMALQKELQKKGRKRKLREDEIVCPTSRSVYKWRTERKR 229
[Close]
BLAST of Spo27239.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FUR1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g012750 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 2.500e-91
Identity = 189/235 (80.43%), Postives = 202/235 (85.96%), Query Frame = 1 

		  

Query: 1   MSSIRNAISKRAYKERSQPDSRKKFGILEKKKDYDIRAKEYHKKEDTLRRLKEKAANRNP 60
           MSSIRNAISKRAYKERSQP SRKKFG LEK KDY IRA+E+HKKEDTLRRLKEKAANRNP
Sbjct: 1   MSSIRNAISKRAYKERSQPASRKKFGFLEKHKDYVIRAREFHKKEDTLRRLKEKAANRNP 60

Query: 61  DEFYFGMIRSNTTNGVHRPESEANKYSPEELLLMKTQDRGYVLQKILSEKKEITYSLKVE 120
           DEFYF MIR+ T NGVHRPESEANKY+PEELLLMKTQD GYVLQKI SEKK      KV 
Sbjct: 61  DEFYFRMIRTKTVNGVHRPESEANKYTPEELLLMKTQDIGYVLQKIQSEKK------KVG 120

Query: 121 KRRAVLHSLDNRPSIKHVYFAEDSEEAKEIQSRSSRDAELRTSGSVPSAIMRKMKASYKE 180
           K +A+LHSLD RP  KH+Y+AEDSEEA EIQSRSS+  EL TSGSVP AI RK  ASY+E
Sbjct: 121 KLKAILHSLDIRPLSKHIYYAEDSEEANEIQSRSSKKDELPTSGSVPYAIKRKTDASYRE 180

Query: 181 LEARKKRVEDLERVYAEMALQKELQKKGRKRKLREDEIVSPTGRPVYKWRAERKR 236
           LEAR KR+EDLE+V+AEMALQKELQKKGRKRKLREDEIV PT R VYKWR ERKR
Sbjct: 181 LEARMKRIEDLEKVHAEMALQKELQKKGRKRKLREDEIVCPTSRSVYKWRTERKR 229
[Close]
BLAST of Spo27239.1 vs. UniProtKB/TrEMBL
Match: B9IHG8_POPTR (U3 small nucleolar RNA-associated protein 11 OS=Populus trichocarpa GN=POPTR_0016s02490g PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 4.000e-81
Identity = 165/235 (70.21%), Postives = 193/235 (82.13%), Query Frame = 1 

		  

Query: 1   MSSIRNAISKRAYKERSQPDSRKKFGILEKKKDYDIRAKEYHKKEDTLRRLKEKAANRNP 60
           MSS+RNAI ++A+KER+QP +RKKFG+LEK KDY  RAK +HKKE+TLRRLKEKAA+RNP
Sbjct: 1   MSSLRNAIPRKAHKERAQPQARKKFGLLEKHKDYVARAKAFHKKEETLRRLKEKAASRNP 60

Query: 61  DEFYFGMIRSNTTNGVHRPESEANKYSPEELLLMKTQDRGYVLQKILSEKKEITYSLKVE 120
           DEFYFGMI+S T +GVHRP+SEANKY+ EELLLMKTQD GY+LQK  SEKK      K+E
Sbjct: 61  DEFYFGMIKSKTVDGVHRPQSEANKYTQEELLLMKTQDIGYILQKAQSEKK------KIE 120

Query: 121 KRRAVLHSLDNRPSIKHVYFAEDSEEAKEIQSRSSRDAELRTSGSVPSAIMRKMKASYKE 180
           K  A LHSLD RPS KH+YFAED EEAKEI+SRSS +    TS  VP  I RK+ +SY+E
Sbjct: 121 KLTATLHSLDGRPSSKHIYFAEDREEAKEIRSRSSENKMATTSVDVPDNIKRKIASSYRE 180

Query: 181 LEARKKRVEDLERVYAEMALQKELQKKGRKRKLREDEIVSPTGRPVYKWRAERKR 236
           LEARK R   LE++Y +MALQKELQKKGRKRKLREDEIV PT +PV+KWR+ERKR
Sbjct: 181 LEARKNRANQLEKIYMDMALQKELQKKGRKRKLREDEIVCPTTKPVFKWRSERKR 229
[Close]
BLAST of Spo27239.1 vs. ExPASy Swiss-Prot
Match: UTP11_ORYSJ (Probable U3 small nucleolar RNA-associated protein 11 OS=Oryza sativa subsp. japonica GN=Os01g0810000 PE=2 SV=2)

HSP 1 Score: 280.4 bits (716), Expect = 1.800e-74
Identity = 148/235 (62.98%), Postives = 188/235 (80.00%), Query Frame = 1 

		  

Query: 1   MSSIRNAISKRAYKERSQPDSRKKFGILEKKKDYDIRAKEYHKKEDTLRRLKEKAANRNP 60
           MSS+RNAI +RA+KER+QP+SRKKFG+LEK KDY +RAK +H+KE+T+R+LKEKA+ RNP
Sbjct: 1   MSSLRNAIQRRAHKERAQPESRKKFGLLEKHKDYIVRAKAFHQKEETIRKLKEKASFRNP 60

Query: 61  DEFYFGMIRSNTTNGVHRPESEANKYSPEELLLMKTQDRGYVLQKILSEKKEITYSLKVE 120
           DEFYF MI S T +G+HRP+ EANKY+ +EL+L+KT+D GY+LQ I SEKK      K+E
Sbjct: 61  DEFYFKMINSKTVDGIHRPKPEANKYTEDELMLLKTKDMGYILQGIQSEKK------KIE 120

Query: 121 KRRAVLHSLDNRPSIKHVYFAEDSEEAKEIQSRSSRDAELRTSGSVPSAIMRKMKASYKE 180
           K  ++LH LDN+   KHVYFAED EE KEIQSR  + +      ++PS I RK  +SY+E
Sbjct: 121 KLSSMLHELDNKRPNKHVYFAEDREEVKEIQSRIEQKSSSLGLDNIPSRIKRKTASSYRE 180

Query: 181 LEARKKRVEDLERVYAEMALQKELQKKGRKRKLREDEIVSPTGRPVYKWRAERKR 236
           LE RK+RV+ LE++YA+MALQKEL+K GRKRKLREDEI + T RPVYKWRA+RKR
Sbjct: 181 LEERKQRVQKLEKLYADMALQKELKKPGRKRKLREDEIENQTSRPVYKWRAQRKR 229
[Close]
BLAST of Spo27239.1 vs. ExPASy Swiss-Prot
Match: UTP11_ARATH (Probable U3 small nucleolar RNA-associated protein 11 OS=Arabidopsis thaliana GN=At3g60360 PE=1 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 3.700e-64
Identity = 132/235 (56.17%), Postives = 177/235 (75.32%), Query Frame = 1 

		  

Query: 1   MSSIRNAISKRAYKERSQPDSRKKFGILEKKKDYDIRAKEYHKKEDTLRRLKEKAANRNP 60
           MSS+RNAI + A+KERSQP++RK+FGILEK KDY IRA  YHKK++TL+ L++KAA +NP
Sbjct: 1   MSSLRNAIPRPAHKERSQPEARKRFGILEKHKDYIIRANAYHKKQETLKILRQKAAFKNP 60

Query: 61  DEFYFGMIRSNTTNGVHRPESEANKYSPEELLLMKTQDRGYVLQKILSEKKEITYSLKVE 120
           DEF F MI S T +G HRP+ E NKYS EEL++MKTQD GYV QK  SEK       K++
Sbjct: 61  DEFNFKMINSKTVDGRHRPKDEVNKYSAEELMIMKTQDIGYVFQKWQSEKN------KID 120

Query: 121 KRRAVLHSLDNRPSIKHVYFAEDSEEAKEIQSRSSRDAELRTSGSVPSAIMRKMKASYKE 180
           K  A L    ++ S +HVY+AED EEA+E++ +    +++ T   +P  I +KM  SY++
Sbjct: 121 KLTASLQCTGDQSSRRHVYYAEDREEARELEVQGRSKSDISTV-EIPKDIKKKMDRSYRD 180

Query: 181 LEARKKRVEDLERVYAEMALQKELQKKGRKRKLREDEIVSPTGRPVYKWRAERKR 236
           LE RK R +DLE++Y +M++QKELQKKGRKRKLR+DE+++P G+ VYKWRA+RKR
Sbjct: 181 LEGRKSRAKDLEKLYTDMSMQKELQKKGRKRKLRDDELLNPNGKAVYKWRADRKR 228
[Close]
BLAST of Spo27239.1 vs. ExPASy Swiss-Prot
Match: UTP11_MOUSE (Probable U3 small nucleolar RNA-associated protein 11 OS=Mus musculus GN=Utp11 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.200e-23
Identity = 84/253 (33.20%), Postives = 137/253 (54.15%), Query Frame = 1 

		  

Query: 10  KRAYKERSQPDSRKKFGILEKKKDYDIRAKEYHKKEDTLRRLKEKAANRNPDEFYFGMIR 69
           +R ++ERSQP  RK+ G+LEKKKDY +RA +YHKK+D LR L++KA  +NPDEFY+ M R
Sbjct: 13  QREHRERSQPGFRKRLGLLEKKKDYKLRANDYHKKQDFLRALRKKALEKNPDEFYYKMTR 72

Query: 70  SNTTNGVHRPESEANKYSPEELLLMKTQDRGYVLQKILSEKKEITYSLKVEKRRAVLHSL 129
           +   +GVH  +    + + E+L LM+TQD  Y+  K ++E K      K+E+ ++ LH L
Sbjct: 73  AKLQDGVHIFKENKEEVTAEQLKLMRTQDIKYIEMKRVAEAK------KIERLKSELHLL 132

Query: 130 D--NRPSIKHVYFAEDSEE------------AKEIQSRSSRDAELRT------SGSVP-S 189
           D   +   KHV+F +  +E            A E+  R      + T       G+ P +
Sbjct: 133 DFQGKQQKKHVFFFDTKKEVERFDVATHLQTAPELVDRVYNRPRIETLQKERVKGATPQT 192

Query: 190 AIMRKMKASYKELEARKKRVEDLER------VYAEMALQKELQKKGRKRKLREDEIVSPT 236
            + R  K   K+ +      + +ER      V  ++  +K+L  K +K K++++ + SP 
Sbjct: 193 GLKRIAKERQKQYDC---LTQRIEREKQLFVVAQKIQTRKDLMDKTQKVKVKKETVNSPA 252
[Close]
BLAST of Spo27239.1 vs. ExPASy Swiss-Prot
Match: UTP11_RAT (Probable U3 small nucleolar RNA-associated protein 11 OS=Rattus norvegicus GN=Utp11 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 9.300e-23
Identity = 82/260 (31.54%), Postives = 141/260 (54.23%), Query Frame = 1 

		  

Query: 2   SSIRNAIS--KRAYKERSQPDSRKKFGILEKKKDYDIRAKEYHKKEDTLRRLKEKAANRN 61
           ++ R A+   +R Y+ERSQP  RK  G+LEKKKDY +RA +Y KK++ L+ L++KA  +N
Sbjct: 3   AAFRKAVKSRQREYRERSQPGFRKHLGLLEKKKDYKLRADDYRKKQEYLKALRKKALEKN 62

Query: 62  PDEFYFGMIRSNTTNGVHRPESEANKYSPEELLLMKTQDRGYVLQKILSEKKEITYSLKV 121
           PDEFY+ M R    +GVH  +    + +PE+L LM+TQD  Y+  K ++E K      K+
Sbjct: 63  PDEFYYKMTRVKLQDGVHIIKETKEEVTPEQLKLMRTQDVKYIEMKRVAEAK------KI 122

Query: 122 EKRRAVLHSLD--NRPSIKHVYFAEDSEE------------AKEIQSRSSRDAELRT--- 181
           E+ ++ LH LD   +   +HV+F +  +E            A E+  R      + T   
Sbjct: 123 ERLKSELHLLDFQGKQQNRHVFFFDTKKEVEQFDVAAHLQTAPELVDRVFNRPRIETLQK 182

Query: 182 ----SGSVPSAIMRKMKASYKELEARKKRVEDLERVYA---EMALQKELQKKGRKRKLRE 236
                 +  + + R  K   K+     +R+E  ++++    ++  +K+L  K +K K+++
Sbjct: 183 EKVKGVTNQTGLKRIAKERQKQYNCLTQRIEREKKLFVIAQKIQTRKDLMDKTQKVKVKK 242
[Close]
BLAST of Spo27239.1 vs. ExPASy Swiss-Prot
Match: UTP11_HUMAN (Probable U3 small nucleolar RNA-associated protein 11 OS=Homo sapiens GN=UTP11 PE=1 SV=2)

HSP 1 Score: 108.2 bits (269), Expect = 1.200e-22
Identity = 80/250 (32.00%), Postives = 136/250 (54.40%), Query Frame = 1 

		  

Query: 10  KRAYKERSQPDSRKKFGILEKKKDYDIRAKEYHKKEDTLRRLKEKAANRNPDEFYFGMIR 69
           +R ++ERSQP  RK  G+LEKKKDY +RA +Y KK++ L+ L++KA  +NPDEFY+ M R
Sbjct: 13  QREHRERSQPGFRKHLGLLEKKKDYKLRADDYRKKQEYLKALRKKALEKNPDEFYYKMTR 72

Query: 70  SNTTNGVHRPESEANKYSPEELLLMKTQDRGYVLQKILSEKKEITYSLKVEKRRAVLHSL 129
               +GVH  +    + +PE+L LM+TQD  Y+  K ++E K      K+E+ ++ LH L
Sbjct: 73  VKLQDGVHIIKETKEEVTPEQLKLMRTQDVKYIEMKRVAEAK------KIERLKSELHLL 132

Query: 130 D--NRPSIKHVYFAEDSEE------------AKEIQSRSSRDAELRT-------SGSVPS 189
           D   +   KHV+F +  +E            A E+  R      + T         +  +
Sbjct: 133 DFQGKQQNKHVFFFDTKKEVEQFDVATHLQTAPELVDRVFNRPRIETLQKEKVKGVTNQT 192

Query: 190 AIMRKMKASYKELEARKKRVEDLERVYA---EMALQKELQKKGRKRKLREDEIVSPTGRP 236
            + R  K   K+     +R+E  ++++    ++  +K+L  K +K K++++ + SP    
Sbjct: 193 GLKRIAKERQKQYNCLTQRIEREKKLFVIAQKIQTRKDLMDKTQKVKVKKETVNSPA--- 252
[Close]
BLAST of Spo27239.1 vs. TAIR (Arabidopsis)
Match: AT3G60360.1 (embryo sac development arrest 14)

HSP 1 Score: 246.1 bits (627), Expect = 2.100e-65
Identity = 132/235 (56.17%), Postives = 177/235 (75.32%), Query Frame = 1 

		  

Query: 1   MSSIRNAISKRAYKERSQPDSRKKFGILEKKKDYDIRAKEYHKKEDTLRRLKEKAANRNP 60
           MSS+RNAI + A+KERSQP++RK+FGILEK KDY IRA  YHKK++TL+ L++KAA +NP
Sbjct: 1   MSSLRNAIPRPAHKERSQPEARKRFGILEKHKDYIIRANAYHKKQETLKILRQKAAFKNP 60

Query: 61  DEFYFGMIRSNTTNGVHRPESEANKYSPEELLLMKTQDRGYVLQKILSEKKEITYSLKVE 120
           DEF F MI S T +G HRP+ E NKYS EEL++MKTQD GYV QK  SEK       K++
Sbjct: 61  DEFNFKMINSKTVDGRHRPKDEVNKYSAEELMIMKTQDIGYVFQKWQSEKN------KID 120

Query: 121 KRRAVLHSLDNRPSIKHVYFAEDSEEAKEIQSRSSRDAELRTSGSVPSAIMRKMKASYKE 180
           K  A L    ++ S +HVY+AED EEA+E++ +    +++ T   +P  I +KM  SY++
Sbjct: 121 KLTASLQCTGDQSSRRHVYYAEDREEARELEVQGRSKSDISTV-EIPKDIKKKMDRSYRD 180

Query: 181 LEARKKRVEDLERVYAEMALQKELQKKGRKRKLREDEIVSPTGRPVYKWRAERKR 236
           LE RK R +DLE++Y +M++QKELQKKGRKRKLR+DE+++P G+ VYKWRA+RKR
Sbjct: 181 LEGRKSRAKDLEKLYTDMSMQKELQKKGRKRKLRDDELLNPNGKAVYKWRADRKR 228
The following BLAST results are available for this feature:
BLAST of Spo27239.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902228973|gb|KNA21338.1|6.3e-12099.5hypothetical protein SOVF_0436... [more]
gi|902205061|gb|KNA15071.1|2.8e-9694.6hypothetical protein SOVF_1014... [more]
gi|731355545|ref|XP_010689199.1|6.6e-9381.2PREDICTED: probable U3 small n... [more]
gi|731313969|ref|XP_010683417.1|3.6e-9180.4PREDICTED: probable U3 small n... [more]
gi|224137520|ref|XP_002322578.1|5.8e-8170.2U3 small nucleolar RNA-associa... [more]
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BLAST of Spo27239.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RPD4_SPIOL4.4e-12099.5U3 small nucleolar RNA-associa... [more]
A0A0K9R6D6_SPIOL2.0e-9694.6Uncharacterized protein OS=Spi... [more]
A0A0J8BLJ2_BETVU4.6e-9381.2Uncharacterized protein OS=Bet... [more]
A0A0J8FUR1_BETVU2.5e-9180.4Uncharacterized protein OS=Bet... [more]
B9IHG8_POPTR4.0e-8170.2U3 small nucleolar RNA-associa... [more]
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BLAST of Spo27239.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
UTP11_ORYSJ1.8e-7462.9Probable U3 small nucleolar RN... [more]
UTP11_ARATH3.7e-6456.1Probable U3 small nucleolar RN... [more]
UTP11_MOUSE4.2e-2333.2Probable U3 small nucleolar RN... [more]
UTP11_RAT9.3e-2331.5Probable U3 small nucleolar RN... [more]
UTP11_HUMAN1.2e-2232.0Probable U3 small nucleolar RN... [more]
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BLAST of Spo27239.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G60360.12.1e-6556.1embryo sac development arrest ... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007144Small-subunit processome, Utp11PANTHERPTHR12838U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11coord: 2..235
score: 1.7
IPR007144Small-subunit processome, Utp11PFAMPF03998Utp11coord: 10..235
score: 6.7
NoneNo IPR availableunknownCoilCoilcoord: 171..201
scor

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0005976 polysaccharide metabolic process
biological_process GO:1901135 carbohydrate derivative metabolic process
biological_process GO:0044249 cellular biosynthetic process
biological_process GO:0044262 cellular carbohydrate metabolic process
biological_process GO:0016043 cellular component organization
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0009987 cellular process
biological_process GO:1901576 organic substance biosynthetic process
biological_process GO:0019637 organophosphate metabolic process
biological_process GO:0006796 phosphate-containing compound metabolic process
biological_process GO:0044281 small molecule metabolic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0009805 coumarin biosynthetic process
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0009611 response to wounding
biological_process GO:0009627 systemic acquired resistance
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0016998 cell wall macromolecule catabolic process
biological_process GO:0007020 microtubule nucleation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0009058 biosynthetic process
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0006897 endocytosis
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0000338 protein deneddylation
biological_process GO:0051604 protein maturation
biological_process GO:0016567 protein ubiquitination
biological_process GO:0009909 regulation of flower development
biological_process GO:0032204 regulation of telomere maintenance
biological_process GO:0050826 response to freezing
biological_process GO:0010332 response to gamma radiation
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0010162 seed dormancy process
biological_process GO:0009845 seed germination
biological_process GO:0043247 telomere maintenance in response to DNA damage
biological_process GO:0044030 regulation of DNA methylation
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0010048 vernalization response
biological_process GO:0010951 negative regulation of endopeptidase activity
biological_process GO:0051301 cell division
biological_process GO:0000741 karyogamy
biological_process GO:0009165 nucleotide biosynthetic process
biological_process GO:0006541 glutamine metabolic process
biological_process GO:0006338 chromatin remodeling
biological_process GO:0042742 defense response to bacterium
biological_process GO:0006334 nucleosome assembly
biological_process GO:0006281 DNA repair
biological_process GO:0048767 root hair elongation
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0016049 cell growth
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
biological_process GO:0051302 regulation of cell division
biological_process GO:0032875 regulation of DNA endoreduplication
biological_process GO:0051510 regulation of unidimensional cell growth
biological_process GO:0009616 virus induced gene silencing
biological_process GO:0006432 phenylalanyl-tRNA aminoacylation
biological_process GO:0031347 regulation of defense response
biological_process GO:0000902 cell morphogenesis
biological_process GO:0007267 cell-cell signaling
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0061025 membrane fusion
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0032482 Rab protein signal transduction
biological_process GO:0001101 response to acid chemical
biological_process GO:1901700 response to oxygen-containing compound
biological_process GO:0006810 transport
biological_process GO:0009644 response to high light intensity
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0001522 pseudouridine synthesis
biological_process GO:0007276 gamete generation
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0007034 vacuolar transport
biological_process GO:0019048 modulation by virus of host morphology or physiology
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0010106 cellular response to iron ion starvation
biological_process GO:0006826 iron ion transport
biological_process GO:0015706 nitrate transport
biological_process GO:0010167 response to nitrate
biological_process GO:0006970 response to osmotic stress
biological_process GO:0015031 protein transport
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0006952 defense response
biological_process GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter
biological_process GO:0006367 transcription initiation from RNA polymerase II promoter
biological_process GO:0009561 megagametogenesis
biological_process GO:0009870 defense response signaling pathway, resistance gene-dependent
biological_process GO:0044267 cellular protein metabolic process
biological_process GO:0009628 response to abiotic stimulus
biological_process GO:0006950 response to stress
biological_process GO:0000165 MAPK cascade
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0009640 photomorphogenesis
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0010019 chloroplast-nucleus signaling pathway
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0009933 meristem structural organization
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0071494 cellular response to UV-C
biological_process GO:0015994 chlorophyll metabolic process
biological_process GO:0009813 flavonoid biosynthetic process
biological_process GO:0009749 response to glucose
biological_process GO:0006788 heme oxidation
biological_process GO:0015979 photosynthesis
biological_process GO:0010024 phytochromobilin biosynthetic process
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0006777 Mo-molybdopterin cofactor biosynthetic process
biological_process GO:0009408 response to heat
biological_process GO:0006979 response to oxidative stress
biological_process GO:0009744 response to sucrose
biological_process GO:0009750 response to fructose
biological_process GO:0006508 proteolysis
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0006364 rRNA processing
biological_process GO:0006468 protein phosphorylation
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0006457 protein folding
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0000023 maltose metabolic process
biological_process GO:0046838 phosphorylated carbohydrate dephosphorylation
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0005983 starch catabolic process
biological_process GO:0033036 macromolecule localization
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0071702 organic substance transport
biological_process GO:0016042 lipid catabolic process
biological_process GO:0031047 gene silencing by RNA
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006310 DNA recombination
biological_process GO:0032774 RNA biosynthetic process
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0019915 lipid storage
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006412 translation
biological_process GO:0015996 chlorophyll catabolic process
biological_process GO:0008654 phospholipid biosynthetic process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0010074 maintenance of meristem identity
biological_process GO:0051321 meiotic cell cycle
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0009536 plastid
cellular_component GO:0016020 membrane
cellular_component GO:0031461 cullin-RING ubiquitin ligase complex
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005819 spindle
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0000815 ESCRT III complex
cellular_component GO:0009506 plasmodesma
cellular_component GO:0009522 photosystem I
cellular_component GO:0048046 apoplast
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0044425 membrane part
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0044446 intracellular organelle part
cellular_component GO:0009328 phenylalanine-tRNA ligase complex
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005773 vacuole
cellular_component GO:0005730 nucleolus
cellular_component GO:0032040 small-subunit processome
cellular_component GO:0000786 nucleosome
cellular_component GO:0019008 molybdopterin synthase complex
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0044435 plastid part
cellular_component GO:0005829 cytosol
cellular_component GO:0000785 chromatin
cellular_component GO:0005840 ribosome
cellular_component GO:0030131 clathrin adaptor complex
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005737 cytoplasm
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0000049 tRNA binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:2001070 starch binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0019003 GDP binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0008138 protein tyrosine/serine/threonine phosphatase activity
molecular_function GO:0032440 2-alkenal reductase [NAD(P)] activity
molecular_function GO:0004826 phenylalanine-tRNA ligase activity
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0050308 sugar-phosphatase activity
molecular_function GO:0008233 peptidase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity
molecular_function GO:0034722 gamma-glutamyl-peptidase activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0004392 heme oxygenase (decyclizing) activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0030366 molybdopterin synthase activity
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0004601 peroxidase activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0016746 transferase activity, transferring acyl groups
molecular_function GO:0019905 syntaxin binding
molecular_function GO:0016788 hydrolase activity, acting on ester bonds
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0016790 thiolester hydrolase activity
molecular_function GO:0004046 aminoacylase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0017111 nucleoside-triphosphatase activity
molecular_function GO:0004527 exonuclease activity
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0031625 ubiquitin protein ligase binding
molecular_function GO:0008080 N-acetyltransferase activity
molecular_function GO:0020037 heme binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0009982 pseudouridine synthase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo218330.78Barchart | Table
Spo041040.78Barchart | Table
Spo078700.77Barchart | Table
Spo144030.77Barchart | Table
Spo039840.76Barchart | Table
Spo182850.75Barchart | Table
Spo181300.75Barchart | Table
Spo038650.74Barchart | Table
Spo168040.74Barchart | Table
Spo145890.74Barchart | Table
Spo216000.73Barchart | Table
Spo255730.72Barchart | Table
Spo018010.72Barchart | Table
Spo036090.72Barchart | Table
Spo233800.72Barchart | Table
Spo266720.72Barchart | Table
Spo093870.72Barchart | Table
Spo263550.72Barchart | Table
Spo105000.72Barchart | Table
Spo106610.72Barchart | Table
Spo025790.71Barchart | Table
Spo232860.71Barchart | Table
Spo105680.71Barchart | Table
Spo129760.71Barchart | Table
Spo189430.71Barchart | Table
Spo182230.71Barchart | Table
Spo026480.71Barchart | Table
Spo063980.70Barchart | Table
Spo229990.70Barchart | Table
Spo229400.70Barchart | Table
Spo068110.70Barchart | Table
Spo070790.70Barchart | Table
Spo221670.70Barchart | Table
Spo074150.70Barchart | Table
Spo134920.70Barchart | Table
Spo172060.70Barchart | Table
Spo101950.70Barchart | Table
Spo003910.70Barchart | Table
Spo163140.70Barchart | Table
Spo248410.70Barchart | Table
Spo272030.70Barchart | Table
Spo030020.69Barchart | Table
Spo114490.69Barchart | Table
Spo133180.69Barchart | Table
Spo233820.69Barchart | Table
Spo168440.69Barchart | Table
Spo044330.69Barchart | Table
Spo002830.69Barchart | Table
Spo245900.69Barchart | Table
Spo020650.69Barchart | Table
Spo001610.69Barchart | Table
Spo081820.69Barchart | Table
Spo035050.69Barchart | Table
Spo116880.69Barchart | Table
Spo209120.68Barchart | Table
Spo022310.68Barchart | Table
Spo024990.68Barchart | Table
Spo031950.68Barchart | Table
Spo056400.68Barchart | Table
Spo104210.68Barchart | Table
Spo114350.68Barchart | Table
Spo119510.68Barchart | Table
Spo121070.68Barchart | Table
Spo162180.68Barchart | Table
Spo163610.68Barchart | Table
Spo186460.68Barchart | Table
Spo232490.68Barchart | Table
Spo246970.67Barchart | Table
Spo161860.67Barchart | Table
Spo234590.67Barchart | Table
Spo066460.67Barchart | Table
Spo084350.67Barchart | Table
Spo072300.67Barchart | Table
Spo116680.67Barchart | Table
Spo083120.67Barchart | Table
Spo131610.67Barchart | Table
Spo108950.67Barchart | Table
Spo008720.67Barchart | Table
Spo119890.67Barchart | Table
Spo137830.67Barchart | Table
Spo262140.67Barchart | Table
Spo110730.67Barchart | Table
Spo247360.67Barchart | Table
Spo216350.66Barchart | Table
Spo115090.66Barchart | Table
Spo111960.66Barchart | Table
Spo150840.66Barchart | Table
Spo152340.66Barchart | Table
Spo165840.66Barchart | Table
Spo101000.66Barchart | Table
Spo173860.66Barchart | Table
Spo189800.66Barchart | Table
Spo204150.66Barchart | Table
Spo204970.66Barchart | Table
Spo081470.66Barchart | Table
Spo218080.66Barchart | Table
Spo076230.66Barchart | Table
Spo218650.66Barchart | Table
Spo052270.66Barchart | Table
Spo042790.66Barchart | Table
Spo040820.66Barchart | Table
Spo234400.66Barchart | Table
Spo237720.66Barchart | Table
Spo240650.66Barchart | Table
Spo033570.66Barchart | Table
Spo031490.66Barchart | Table
Spo028550.66Barchart | Table
Spo123640.66Barchart | Table
Spo253300.65Barchart | Table
Spo011800.65Barchart | Table
Spo098820.65Barchart | Table
Spo258380.65Barchart | Table
Spo192710.65Barchart | Table
Spo239350.65Barchart | Table
Spo105850.65Barchart | Table
Spo244300.65Barchart | Table
Spo079130.65Barchart | Table
Spo186940.65Barchart | Table
Spo132380.65Barchart | Table
Spo172090.65Barchart | Table
Spo100190.65Barchart | Table
Spo268530.65Barchart | Table
Spo224360.65Barchart | Table
Spo094990.65Barchart | Table
Spo065800.65Barchart | Table
Spo005260.65Barchart | Table
Spo163860.65Barchart | Table
Spo248710.65Barchart | Table