Spo27249 (gene)

Overview
NameSpo27249
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionDefensin-like protein 5
Locationchr5 : 8768298 .. 8769139 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATGTCAATGAGGCCATTTGCTACTTTTTTCCTTGTGTTCTTACTCGTCTTGACAACAGGTTCCTAAGTCTATCCTTACCGTCTTTTAAATTAATATTTTTATTTTACGCATCCATTTGAGATAAAGAATTTCAAGAATAAAGAATTAGTTTCTTTTTGCCTTTGCAAATTCTTTTTCTTTAATATTATTTTGAAAGAACAATAATGTCAAAAAGCAACAATAATTCAAAAAAAGATGGAGGAGTTCTTTTGTTTGTTAGCTACGTGTCTAAGTATAGGGTCAGTGTCGGACTCGTGCTTCTCTTTCATAAATGAGGTATATGCACATCCCGTCCCACGTGTCACGTTGGGGTGGATCGTCCCGTGCTAGCTGACTGGCTTGACTCTCTTACTAATTTTAAGATTTTTTTTGTTATTGTTTAAAAAATAAGCGTGTCGGCTCATCGTACTTGTGTCGGGCTCTTGCCAAATTTCAAAAATGATGTCCATGGAGTGGCGTGGCCATTACAATAGGCATGTGTCATGCCAGGCCAGGCAAATTTACATTAATTTTTCTACCATATCATTTCTGATGCAAATTCATCTAAACTAATACTCAGTACATATACGCTATTTGTTTCCAATTTTCATGAATCTAACACATTTTTTTGTATATGGGGAGCAGAGGTAAGCACAAAAGTAGCAGAAGCAAGGATATGTGCTAGTCCAAGTCACACGTTTAGAGGAATATGTTTTAGCAGCAGGAATTGTGAAACTAATTGCAATTCTGAGAGATTTTCTGGAGGAAGTTGTCAAGGTTTTCGTAGAAGATGCATGTGCACCAAGCCTTGCGCTTAA

mRNA sequence

ATGAAGATGTCAATGAGGCCATTTGCTACTTTTTTCCTTGTGTTCTTACTCGTCTTGACAACAGAGGTAAGCACAAAAGTAGCAGAAGCAAGGATATGTGCTAGTCCAAGTCACACGTTTAGAGGAATATGTTTTAGCAGCAGGAATTGTGAAACTAATTGCAATTCTGAGAGATTTTCTGGAGGAAGTTGTCAAGGTTTTCGTAGAAGATGCATGTGCACCAAGCCTTGCGCTTAA

Coding sequence (CDS)

ATGAAGATGTCAATGAGGCCATTTGCTACTTTTTTCCTTGTGTTCTTACTCGTCTTGACAACAGAGGTAAGCACAAAAGTAGCAGAAGCAAGGATATGTGCTAGTCCAAGTCACACGTTTAGAGGAATATGTTTTAGCAGCAGGAATTGTGAAACTAATTGCAATTCTGAGAGATTTTCTGGAGGAAGTTGTCAAGGTTTTCGTAGAAGATGCATGTGCACCAAGCCTTGCGCTTAA

Protein sequence

MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFSGGSCQGFRRRCMCTKPCA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo27249.1Spo27249.1mRNA


Homology
[Close]
BLAST of Spo27249.1 vs. NCBI nr
Match: gi|870858987|gb|KMT10451.1| (hypothetical protein BVRB_5g115780 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 124.8 bits (312), Expect = 6.700e-26
Identity = 57/78 (73.08%), Postives = 67/78 (85.90%), Query Frame = 1 

		  

Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          MK SM+P   FFLVFL+VLTT+V T+VAEAR C +PSH FRGIC SSRNCE+ C++ERF 
Sbjct: 1  MKQSMKPVVAFFLVFLIVLTTDVGTRVAEARTCMTPSHQFRGICVSSRNCESACHTERFP 60

Query: 61 GGSCQGFRRRCMCTKPCA 79
          GG+CQGFRRRCMCT+PCA
Sbjct: 61 GGTCQGFRRRCMCTRPCA 78
[Close]
BLAST of Spo27249.1 vs. NCBI nr
Match: gi|902203910|gb|KNA14731.1| (hypothetical protein SOVF_104940 [Spinacia oleracea])

HSP 1 Score: 121.3 bits (303), Expect = 7.400e-25
Identity = 56/77 (72.73%), Postives = 62/77 (80.52%), Query Frame = 1 

		  

Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          MK SMRPFA  FLV  LVL TE+  +V EAR+C+SPSH F+GIC SSRNCE  CNSERFS
Sbjct: 1  MKQSMRPFAALFLVLFLVLATEIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS 60

Query: 61 GGSCQGFRRRCMCTKPC 78
          GG C+GFRRRCMCT PC
Sbjct: 61 GGECKGFRRRCMCTGPC 77
[Close]
BLAST of Spo27249.1 vs. NCBI nr
Match: gi|902113320|gb|KNA03822.1| (hypothetical protein SOVF_205360 [Spinacia oleracea])

HSP 1 Score: 113.6 bits (283), Expect = 1.500e-22
Identity = 51/66 (77.27%), Postives = 58/66 (87.88%), Query Frame = 1 

		  

Query: 12 FLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFSGGSCQGFRRRC 71
          FLV LLVL  E++ +VAEAR C +PSHTFRG+C SSRNCE+NCNSERFS GSCQGFRRRC
Sbjct: 6  FLVLLLVLAAEIAPEVAEARTCTTPSHTFRGVCVSSRNCESNCNSERFSSGSCQGFRRRC 65

Query: 72 MCTKPC 78
          MC+KPC
Sbjct: 66 MCSKPC 71
[Close]
BLAST of Spo27249.1 vs. NCBI nr
Match: gi|870858984|gb|KMT10448.1| (hypothetical protein BVRB_5g115750 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 108.6 bits (270), Expect = 5.000e-21
Identity = 50/78 (64.10%), Postives = 58/78 (74.36%), Query Frame = 1 

		  

Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          MK  MRPFA   L  LLVL TE+  +VAEAR C +PSH FRGIC S RNCE+ CNSE F 
Sbjct: 1  MKQPMRPFAAILLALLLVLATEIGPRVAEARTCVTPSHRFRGICVSKRNCESACNSEGFP 60

Query: 61 GGSCQGFRRRCMCTKPCA 79
           G+C+GFRRRC+C +PCA
Sbjct: 61 DGNCKGFRRRCICNRPCA 78
[Close]
BLAST of Spo27249.1 vs. NCBI nr
Match: gi|870858985|gb|KMT10449.1| (hypothetical protein BVRB_5g115760 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 107.8 bits (268), Expect = 8.400e-21
Identity = 49/78 (62.82%), Postives = 60/78 (76.92%), Query Frame = 1 

		  

Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          MK  MRPFA   +VFLLVL TE+  +VAEAR C +PSH+F+GIC   RNCE+ CNSE F+
Sbjct: 1  MKQPMRPFAAILVVFLLVLATEIGPRVAEARTCDAPSHSFKGICTRKRNCESVCNSEGFA 60

Query: 61 GGSCQGFRRRCMCTKPCA 79
           G C+GFRRRC+C +PCA
Sbjct: 61 DGDCKGFRRRCICNRPCA 78
[Close]
BLAST of Spo27249.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F3X2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g115780 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 4.700e-26
Identity = 57/78 (73.08%), Postives = 67/78 (85.90%), Query Frame = 1 

		  

Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          MK SM+P   FFLVFL+VLTT+V T+VAEAR C +PSH FRGIC SSRNCE+ C++ERF 
Sbjct: 1  MKQSMKPVVAFFLVFLIVLTTDVGTRVAEARTCMTPSHQFRGICVSSRNCESACHTERFP 60

Query: 61 GGSCQGFRRRCMCTKPCA 79
          GG+CQGFRRRCMCT+PCA
Sbjct: 61 GGTCQGFRRRCMCTRPCA 78
[Close]
BLAST of Spo27249.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R5F0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_104940 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 5.100e-25
Identity = 56/77 (72.73%), Postives = 62/77 (80.52%), Query Frame = 1 

		  

Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          MK SMRPFA  FLV  LVL TE+  +V EAR+C+SPSH F+GIC SSRNCE  CNSERFS
Sbjct: 1  MKQSMRPFAALFLVLFLVLATEIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS 60

Query: 61 GGSCQGFRRRCMCTKPC 78
          GG C+GFRRRCMCT PC
Sbjct: 61 GGECKGFRRRCMCTGPC 77
[Close]
BLAST of Spo27249.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q961_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_205360 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.100e-22
Identity = 51/66 (77.27%), Postives = 58/66 (87.88%), Query Frame = 1 

		  

Query: 12 FLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFSGGSCQGFRRRC 71
          FLV LLVL  E++ +VAEAR C +PSHTFRG+C SSRNCE+NCNSERFS GSCQGFRRRC
Sbjct: 6  FLVLLLVLAAEIAPEVAEARTCTTPSHTFRGVCVSSRNCESNCNSERFSSGSCQGFRRRC 65

Query: 72 MCTKPC 78
          MC+KPC
Sbjct: 66 MCSKPC 71
[Close]
BLAST of Spo27249.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CEL9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g115750 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.500e-21
Identity = 50/78 (64.10%), Postives = 58/78 (74.36%), Query Frame = 1 

		  

Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          MK  MRPFA   L  LLVL TE+  +VAEAR C +PSH FRGIC S RNCE+ CNSE F 
Sbjct: 1  MKQPMRPFAAILLALLLVLATEIGPRVAEARTCVTPSHRFRGICVSKRNCESACNSEGFP 60

Query: 61 GGSCQGFRRRCMCTKPCA 79
           G+C+GFRRRC+C +PCA
Sbjct: 61 DGNCKGFRRRCICNRPCA 78
[Close]
BLAST of Spo27249.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CE40_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g115760 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 5.900e-21
Identity = 49/78 (62.82%), Postives = 60/78 (76.92%), Query Frame = 1 

		  

Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          MK  MRPFA   +VFLLVL TE+  +VAEAR C +PSH+F+GIC   RNCE+ CNSE F+
Sbjct: 1  MKQPMRPFAAILVVFLLVLATEIGPRVAEARTCDAPSHSFKGICTRKRNCESVCNSEGFA 60

Query: 61 GGSCQGFRRRCMCTKPCA 79
           G C+GFRRRC+C +PCA
Sbjct: 61 DGDCKGFRRRCICNRPCA 78
[Close]
BLAST of Spo27249.1 vs. ExPASy Swiss-Prot
Match: DF322_SOLTU (Defensin-like protein P322 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 5.700e-17
Identity = 43/74 (58.11%), Postives = 54/74 (72.97%), Query Frame = 1 

		  

Query: 5  MRPFATFFLVFLLVLTTEVST-KVAEARICASPSHTFRGICFSSRNCETNCNSERFSGGS 64
          MR FATFFL+ +LV+ T++   ++AEAR C S SH F+G C    NC + C +ERFSGG+
Sbjct: 1  MRFFATFFLLAMLVVATKMGPMRIAEARHCESLSHRFKGPCTRDSNCASVCETERFSGGN 60

Query: 65 CQGFRRRCMCTKPC 78
          C GFRRRC CTKPC
Sbjct: 61 CHGFRRRCFCTKPC 74
[Close]
BLAST of Spo27249.1 vs. ExPASy Swiss-Prot
Match: DEF_NELNU (Defensin-like protein OS=Nelumbo nucifera PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 4.800e-16
Identity = 41/77 (53.25%), Postives = 49/77 (63.64%), Query Frame = 1 

		  

Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          M+  MR F++  LV LLV  TE+  KVAEAR C S SH F+G C S  NC + C +E F 
Sbjct: 1  MERGMRLFSSLVLVLLLVTATEMGPKVAEARTCESQSHRFKGACLSDTNCASVCQTEGFP 60

Query: 61 GGSCQGFRRRCMCTKPC 78
           G C+G RRRC C KPC
Sbjct: 61 AGDCKGARRRCFCVKPC 77
[Close]
BLAST of Spo27249.1 vs. ExPASy Swiss-Prot
Match: DFSD2_HELAN (Defensin SD2 OS=Helianthus annuus GN=SD2 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.400e-15
Identity = 42/78 (53.85%), Postives = 49/78 (62.82%), Query Frame = 1 

		  

Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTK-VAEARICASPSHTFRGICFSSRNCETNCNSERF 60
          MK SM+ FA   LV + +L  E+    V EAR C S SH F+G C S  NC   C+SERF
Sbjct: 1  MKSSMKMFAALLLVVMCLLANEMGGPLVVEARTCESQSHKFKGTCLSDTNCANVCHSERF 60

Query: 61 SGGSCQGFRRRCMCTKPC 78
          SGG C+GFRRRC CT  C
Sbjct: 61 SGGKCRGFRRRCFCTTHC 78
[Close]
BLAST of Spo27249.1 vs. ExPASy Swiss-Prot
Match: DEF2_CAPAN (Defensin J1-2 OS=Capsicum annuum PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.600e-14
Identity = 38/69 (55.07%), Postives = 49/69 (71.01%), Query Frame = 1 

		  

Query: 9  ATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFSGGSCQGFR 68
          AT FL+ +LV  T +   VAEAR C S SH F+G+CFS  NC + C++E F+GG C+GFR
Sbjct: 9  ATIFLMMMLVFATGM---VAEARTCESQSHRFKGLCFSKSNCGSVCHTEGFNGGHCRGFR 68

Query: 69 RRCMCTKPC 78
          RRC CT+ C
Sbjct: 69 RRCFCTRHC 74
[Close]
BLAST of Spo27249.1 vs. ExPASy Swiss-Prot
Match: DEF_PETIN (Defensin-like protein OS=Petunia integrifolia PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.400e-14
Identity = 40/78 (51.28%), Postives = 50/78 (64.10%), Query Frame = 1 

		  

Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKV-AEARICASPSHTFRGICFSSRNCETNCNSERF 60
          M  S+R FATFFL+ +L L+TE+     AEAR C S SH F G C    NC + C +E F
Sbjct: 1  MGRSIRLFATFFLIAMLFLSTEMGPMTSAEARTCESQSHRFHGTCVRESNCASVCQTEGF 60

Query: 61 SGGSCQGFRRRCMCTKPC 78
           GG+C+ FRRRC CT+ C
Sbjct: 61 IGGNCRAFRRRCFCTRNC 78
[Close]
BLAST of Spo27249.1 vs. TAIR (Arabidopsis)
Match: AT2G02100.1 (low-molecular-weight cysteine-rich 69)

HSP 1 Score: 78.2 bits (191), Expect = 2.500e-15
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1 

		  

Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          MK+SMR  +   ++F++ + T +     EAR C S SH F+G C S+ NC   C++E F 
Sbjct: 1  MKLSMRLISAVLIMFMIFVATGMGPVTVEARTCESQSHRFKGTCVSASNCANVCHNEGFV 60

Query: 61 GGSCQGFRRRCMCTKPC 78
          GG+C+GFRRRC CT+ C
Sbjct: 61 GGNCRGFRRRCFCTRHC 77
[Close]
BLAST of Spo27249.1 vs. TAIR (Arabidopsis)
Match: AT2G02130.1 (low-molecular-weight cysteine-rich 68)

HSP 1 Score: 76.3 bits (186), Expect = 9.600e-15
Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 1 

		  

Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          MK+S+R  +   L+F++ + T +     EAR C S SH F+G C S+ NC   C++E F 
Sbjct: 1  MKLSVRFISAALLLFMVFIATGMGPVTVEARTCESKSHRFKGPCVSTHNCANVCHNEGFG 60

Query: 61 GGSCQGFRRRCMCTKPC 78
          GG C+GFRRRC CT+ C
Sbjct: 61 GGKCRGFRRRCYCTRHC 77
[Close]
BLAST of Spo27249.1 vs. TAIR (Arabidopsis)
Match: AT2G02120.1 (Scorpion toxin-like knottin superfamily protein)

HSP 1 Score: 73.9 bits (180), Expect = 4.800e-14
Identity = 35/77 (45.45%), Postives = 46/77 (59.74%), Query Frame = 1 

		  

Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          MK SMR  +    + ++ + T +     EAR CAS S  F+G C S  NCE  C++E F 
Sbjct: 1  MKFSMRLISAVLFLVMIFVATGMGPVTVEARTCASQSQRFKGKCVSDTNCENVCHNEGFP 60

Query: 61 GGSCQGFRRRCMCTKPC 78
          GG C+GFRRRC CT+ C
Sbjct: 61 GGDCRGFRRRCFCTRNC 77
[Close]
BLAST of Spo27249.1 vs. TAIR (Arabidopsis)
Match: AT1G61070.1 (low-molecular-weight cysteine-rich 66)

HSP 1 Score: 72.4 bits (176), Expect = 1.400e-13
Identity = 36/77 (46.75%), Postives = 49/77 (63.64%), Query Frame = 1 

		  

Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          MK+S R  +   L+F+ +L T +     EAR C + S+ F G C SS NC   C++E FS
Sbjct: 1  MKVSPRLNSALLLLFM-ILATVMGLVTVEARTCETSSNLFNGPCLSSSNCANVCHNEGFS 60

Query: 61 GGSCQGFRRRCMCTKPC 78
           G C+GFRRRC+CT+PC
Sbjct: 61 DGDCRGFRRRCLCTRPC 76
[Close]
BLAST of Spo27249.1 vs. TAIR (Arabidopsis)
Match: AT5G63660.1 (Scorpion toxin-like knottin superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 2.200e-11
Identity = 34/75 (45.33%), Postives = 44/75 (58.67%), Query Frame = 1 

		  

Query: 3  MSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFSGG 62
          M  + FA FFL+ +L  + E+     E R C S SH F+ +C S+ NC   C +E FSGG
Sbjct: 1  MENKFFAAFFLLLVLFSSQEIIG--GEGRTCQSKSHHFKYMCTSNHNCAIVCRNEGFSGG 60

Query: 63 SCQGFRRRCMCTKPC 78
           C GF RRC CT+ C
Sbjct: 61 RCHGFHRRCYCTRLC 73
The following BLAST results are available for this feature:
BLAST of Spo27249.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|870858987|gb|KMT10451.1|6.7e-2673.0hypothetical protein BVRB_5g11... [more]
gi|902203910|gb|KNA14731.1|7.4e-2572.7hypothetical protein SOVF_1049... [more]
gi|902113320|gb|KNA03822.1|1.5e-2277.2hypothetical protein SOVF_2053... [more]
gi|870858984|gb|KMT10448.1|5.0e-2164.1hypothetical protein BVRB_5g11... [more]
gi|870858985|gb|KMT10449.1|8.4e-2162.8hypothetical protein BVRB_5g11... [more]
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BLAST of Spo27249.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0J8F3X2_BETVU4.7e-2673.0Uncharacterized protein OS=Bet... [more]
A0A0K9R5F0_SPIOL5.1e-2572.7Uncharacterized protein OS=Spi... [more]
A0A0K9Q961_SPIOL1.1e-2277.2Uncharacterized protein OS=Spi... [more]
A0A0J8CEL9_BETVU3.5e-2164.1Uncharacterized protein OS=Bet... [more]
A0A0J8CE40_BETVU5.9e-2162.8Uncharacterized protein OS=Bet... [more]
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BLAST of Spo27249.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
DF322_SOLTU5.7e-1758.1Defensin-like protein P322 OS=... [more]
DEF_NELNU4.8e-1653.2Defensin-like protein OS=Nelum... [more]
DFSD2_HELAN2.4e-1553.8Defensin SD2 OS=Helianthus ann... [more]
DEF2_CAPAN2.6e-1455.0Defensin J1-2 OS=Capsicum annu... [more]
DEF_PETIN3.4e-1451.2Defensin-like protein OS=Petun... [more]
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BLAST of Spo27249.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT2G02100.12.5e-1545.4low-molecular-weight cysteine-... [more]
AT2G02130.19.6e-1545.4low-molecular-weight cysteine-... [more]
AT2G02120.14.8e-1445.4Scorpion toxin-like knottin su... [more]
AT1G61070.11.4e-1346.7low-molecular-weight cysteine-... [more]
AT5G63660.12.2e-1145.3Scorpion toxin-like knottin su... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003614Knottin, scorpion toxin-likeGENE3D3.30.30.10coord: 31..77
score: 2.8
IPR003614Knottin, scorpion toxin-likeSMARTSM00505gth_4coord: 32..77
score: 9.9
IPR003614Knottin, scorpion toxin-likeunknownSSF57095Scorpion toxin-likecoord: 31..77
score: 3.23
IPR008176Defensin, plantPRINTSPR00288PUROTHIONINcoord: 32..47
score: 5.0E-8coord: 62..76
score: 5.
IPR008176Defensin, plantPROSITEPS00940GAMMA_THIONINcoord: 31..54
scor
NoneNo IPR availablePANTHERPTHR33147FAMILY NOT NAMEDcoord: 1..77
score: 6.1
NoneNo IPR availablePFAMPF00304Gamma-thionincoord: 31..77
score: 4.7

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response
biological_process GO:0006863 purine nucleobase transport
biological_process GO:0030163 protein catabolic process
biological_process GO:0071805 potassium ion transmembrane transport
biological_process GO:0006457 protein folding
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0019745 pentacyclic triterpenoid biosynthetic process
biological_process GO:0016311 dephosphorylation
biological_process GO:0015713 phosphoglycerate transmembrane transport
biological_process GO:0030154 cell differentiation
biological_process GO:0006811 ion transport
biological_process GO:0009718 anthocyanin-containing compound biosynthetic process
biological_process GO:0008152 metabolic process
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0042548 regulation of photosynthesis, light reaction
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006508 proteolysis
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0019285 glycine betaine biosynthetic process from choline
biological_process GO:0006013 mannose metabolic process
biological_process GO:0019509 L-methionine salvage from methylthioadenosine
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0016310 phosphorylation
biological_process GO:0000023 maltose metabolic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0006096 glycolytic process
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006012 galactose metabolic process
biological_process GO:0006000 fructose metabolic process
biological_process GO:0006002 fructose 6-phosphate metabolic process
biological_process GO:0046835 carbohydrate phosphorylation
biological_process GO:0006656 phosphatidylcholine biosynthetic process
biological_process GO:0032259 methylation
biological_process GO:0015996 chlorophyll catabolic process
biological_process GO:0089722 phosphoenolpyruvate transmembrane transport
biological_process GO:0019439 aromatic compound catabolic process
biological_process GO:0006352 DNA-templated transcription, initiation
biological_process GO:0055085 transmembrane transport
biological_process GO:0006810 transport
biological_process GO:0006486 protein glycosylation
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0009805 coumarin biosynthetic process
biological_process GO:0009611 response to wounding
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006598 polyamine catabolic process
biological_process GO:0009737 response to abscisic acid
biological_process GO:0009414 response to water deprivation
biological_process GO:0009658 chloroplast organization
biological_process GO:0009409 response to cold
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0010207 photosystem II assembly
biological_process GO:0009637 response to blue light
biological_process GO:0045893 positive regulation of transcription, DNA-templated
cellular_component GO:0005945 6-phosphofructokinase complex
cellular_component GO:0005737 cytoplasm
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005840 ribosome
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005622 intracellular
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009507 chloroplast
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
cellular_component GO:0010287 plastoglobule
cellular_component GO:0005777 peroxisome
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003872 6-phosphofructokinase activity
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0000234 phosphoethanolamine N-methyltransferase activity
molecular_function GO:0016301 kinase activity
molecular_function GO:0019133 choline monooxygenase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0016987 sigma factor activity
molecular_function GO:0005215 transporter activity
molecular_function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
molecular_function GO:0005506 iron ion binding
molecular_function GO:0016708 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0016887 ATPase activity
molecular_function GO:0015121 phosphoenolpyruvate:phosphate antiporter activity
molecular_function GO:0015120 phosphoglycerate transmembrane transporter activity
molecular_function GO:0008131 primary amine oxidase activity
molecular_function GO:0016791 phosphatase activity
molecular_function GO:0046592 polyamine oxidase activity
molecular_function GO:0008289 lipid binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0020037 heme binding
molecular_function GO:0052663 antheraxanthin epoxidase activity
molecular_function GO:0052662 zeaxanthin epoxidase activity
molecular_function GO:0009540 zeaxanthin epoxidase [overall] activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005267 potassium channel activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0008233 peptidase activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity
RNA-Seq Expression