Spo27250 (gene)

Overview
NameSpo27250
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionDefensin-like protein
Locationchr5 : 8742876 .. 8754241 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAATGAGGCCATTTGTTGCTTTCTTCCTTGTGTTCTTACTCGTCTTGACAACAGGTTCATAATTCTATTCTTACCTTCTTTTAAATTAATATTTTTGTTCTACGCATCCATTTGAGATAAAGAATTTCAAGAATAAAGCATTAGTTTCTTTTTGCCTTTGCAAGTTCCTTTTCTTGAATATTATTTTGAAAGAACAATGATGTCAAAAAGCAACAATAATTCAAAAAAAGATGGAGGAATTCTTTTGTTTGTTAGCTACTTGTCTAAGTATAGGGTCAGTGTCGGGCTCGTGCTTCTCTTTCATTAATGAGGTGTATGCACATCCCGTCCCACGTATCATGTTGGGGTGGATCGTCCCGTGCTAGCTGACTGGCTTGACTCTCTTACTAATTTTAAGACATTTTTTGTTATTGTTTAAAAAATAAGCGTGTCGGCTCATTGTACTTGTGTCGGGCTCTTGCCAAATTTCAAAAATGATGTCCATGGAATGGCGTGGCCATTACAACAGGCATGTGTCATGCCAGGCCAGGCCAATTTACATTAATTTTTCTACCATATCATTTCTGATGCAAATTCATCTAAACTAATACTCAGTACATATACACTATTTGTTTCCAATTTTCATGAATCTAACACATTTTTTTGTATATGGGGAGCAGAGGTAAGTACAAAAGTAGCAGAAGCAAGGATATGTGCTAGTCCAAGTCCCACGTTCAAAGGAATATGTTTTAGCAGCAGGAATTGTGAAACTAATTGCAATTCTGTGAAATTTTCTGGAGGAAGTTGTCAAGGTTTTCGTAGAAGATGTATGTGCACCAAGCCTTGCGCTTAATTAACCGATGGTGTGCCACGTGCGCGTTCCTCGTCATCAATAATCAGCTTGACATTGGTTAAAATTTGCATTAAAAATAAAAGCAATTTGACGCACGTGTTCTCTTTACATCATCTTCATTCATCCACAATCGAGTGGATGCAGTATACTATGTATATCTATATATAATCTTATATACAAAGTGTGTACTAATACTTGTATTATAGTTGTGGTAACTTTGCAATATGCAAATTAAGTAGTAGTACTATGCTACACTAATAAATTAATGAAAGCTACAATTCATTAACAAAGTTGAAAGTATTATTTACGTTTATCTTTAATTTCGTTTTATTAACAACTACTTCGTGCAAATTTTAGATATTTGAAAAGTACAAGTTAATACGAAATATGAGAATTGAATAGTCTTCATTTTTAGGGGTATAAAACTCAATGCGTGGATTATGGATATATGTGCACGATACTCATGTACTACGTAGGAAATGAACACAAGTGTACAACCTAGACTATGGACATATGTGTACACAATACTATTGTGTGGCAAATGCACACAAATGTACAGCGTGGACCATGGACATCACGATGCTCACTGTGTAGCAAATGAATACAGGTGTATAGATTGGAATATGGACATATGTGTATGATACTCATTGTGTTGCAAATTAAATGAACACAGGTGTATAATCCGGACTATAGACATAGAAAATGAACAAAGGTGCATAACAATACTCATTGTTTAGCAAAAGAGCACAAGTGATGTCCTCAGTTATGGACATATGTGCACTATACTCACTATGATATTATGACAAAAGTGCATCATATGAATTACTTTGTATATTTTTTTAAAAAAAATCATATAAAAAAAAATCTCGTTTCTATCTACTATAATCGCATGTTCTTTTAGTTACATATGCTACGTACATTTGTATACCTTCATTGCGTAATAATCATTGTGAACAATATGTCCATAATCTAATTTGCGGTAAAAAATTATCCACCTTCTAACCTTTTTAAGGGAAAATTACCTTCTTATTTTGATCACATGTACATTCAAATTCTTTACCAAAGGTAAATGGGCCCGGTAGCACCAATTAGGGATGACCCGGGTGAGAAAAAATGTCAGGGTACCCTGAATCGAAATTGGAACATGTTAGGAACCTGAGGTTTCGGAATCGGAACCTGTTGTGCAGGTTCTGGTTCCGGATAACGAAATCGGGAACCTGTTGCAACAGGTTCCGGTTTCGGTTCTCAATTTCCGGAACGGGTACCTTGTTGGGTACCTTGTACATATCAATTCTAATATGAATTGAAGTACCCAAAATAAGGGACCGGGACAAATAAAAATGTTTTCTATGTCCAAAATATAAAACAATCCAAGCTAATCTTTGGAACATATAAATATAGAATTACAATTTAAGCCTAATCTATAAAACAATTAAAGCCCAAAGCATAAAGTACATATTTTGTCCAATAAATTATCAATATTTTATTTGAAGTTTTAAAATGACAGGGTACCTGAATTAGAACCTTGGAACAGGTTCCGGTTCCGGCTCTCATTTTCAGGAACCTGTTACAACAGTGTTTCGGTTTCGGTTCCCATTTTTAGAAACCCGTTGCAACAAGTTCCGATATGATTCTGATTTCTGAAATTTGAATAGGGTACCCTGTTGTGCTCAACCCTGCCACCAATTAATTGACAATTAATGAGAAATTGTTTTTTCTTCTTTATCTTTTTTAATTGGAAAAGAAATAGTTTTGATATGAGCCACATAAAAGGGATGGGTGATCACAATTATAATATTGGAACCACAAATATCTAATCCTATATAAGTAACCTCTAGTGTTGTTATCTTGCTCACTCACCAAATACAACTTCTACAAGTTAATTTCACTAAACATCTTCTTAATTAAGAGCTTAATTATGAAGCAATCAATGAGGCCTTTTGCTGCTATTTTCCTTGTGCTCTTCCTTGTTTTGGCCACAGGTACATTTTATTCCTCTTCCTTTCTAAAACTTATAACTTATAATGTCATTATTTTTCGATCCTTGTACGTCGTATGAAGTATCAAATTAAAGTTCGAATAATAAGAAAACTAATCACGTCTTCTCTGTAAATTCTAAATTAGTTTATATAGTGTATGTCACATAATTAACCACTTACTTTCATAAATTTAATGTTTCTTAATATCTGCATCATTTTGACTTTTCACACTATTCATTTAGAAATATGTTTTAAGATGATGATCGAGGATTTTCACTGGCCGTACTACTACTAGAGACATTGGATCTATCAAACCCCGTCTCTTATAAAACAAACATGTTGATTTCCTTGACCATTTACGATTTTTTGTTTTTGTTTTATGATGTGTTAAGAAATGAAATTTAAACATATACTGAGTATCTTATAGTATATCGAGCATATCTTTTGACATCTTACCGTAACTTAGCAGTATGTGACGTAGTTATCTAACTCGATCATTTTTTCTCCTTGTTATGAATAAAAAAGACATAGGGCCAAGAGTAGTAGAAGCAAGAATGTGTTCATCACCAAGTCATAGGTTCAAGGGAATTTGTACTAGCAGCAGGAATTGTGAGAACACTTGCAACAGCGAACGATTTTCAGGTGGTGAATGTAAAGGCTTTCGCAGAAGATGTATGTGCACGGGACCCTGCGTTTAATTAATTAACATAATTAATGTTAATTAAGTGTGTGCAATTTCCATCCTTAACCTTGTAGTTGAGAGGTGGATATATCATATATGTATGGTTATTAGTTGAACGATAATAAAATTGTAGCATCTATATGTTTGAATCACTTGGTTGTACCATTGTACGGAGTATGTTACTTTGTTAATCACCACTACCCCAATCGATTACTATTAATGAAATGATGCATGTACGTGTTTTTTGTTTGAAGTTCGATTGGAGTTATATAAAGATTTGTGATAGAAGTAATTTCGTAAGAACTTGATTTAACTATCTTATGTATTTATGTAGTTATGTTACGTCTATGTTTGAACGTAATGTTCTTTTTTAACTTATTACGTTATTTCGTATTTCATATACTTTAATTTTAGCTTGTTCGATCTAGTCACTGTAACATTCACATTTTCAATGCCAGCACTGATCAATGAAACTTTCTCGCATTAACTAATTAAACTTGAACCCAACATCAAATTCGGACTACTTGAACCCACCACTTGCCGCCTCCACCGGACCCAATATGTTCCACAATCATTCCGACTACAAAAAAAACCAACTTGCTTTGCTACTTCTGTTTGAGAGAAAAGTTAAGCATGCATTTTATATCAAATCAAGTTGTGATATAAACCGGTTGCTTAACTTTTCCCTTGAAAATAAAAAGTAACAAGGAAAAATCAATCTATTACTATATATTAAAAGAGACACCAGGAATGACACGTGTCAATTTCTGGTGCGATTTTTTCCGGCCAAAAATTACTTTCCTAAAAAAAGTGTATCTGTTTGATTTTAGTTTTATTCTCTACCTTTTTTATATAAACTATTTATGTATGGAAACAAAATATATTTAGTTTATAAATTATGGCAATAATAGATACGACGTAATAATAATTATTCTAAATTGGCAATATTTTAGTCAATCGCTATATTAGTAATGGAAAATATATCACTCAATATTTTGGTCAAATTACCATATTAACATTTTAAATATGCAATTAGATGAATATGAATACATTTAAACGAGTATGTTATAAATGTTATAACTATGCAGTAATTTGGGAGATATATTCAGTTAAATATTTTGTGAAAAAAATGATCAAAATCCGTGCGTGCACGGGATCTAATCTAGTTATCAATAAAAAATAGTTGGATCAATTAATAAAATTAATTTTAAGCAAGGAATAGCCAAGGTGTGACTCAAGAAAATCGTCTCACTATTTTATATATCATCTCATCCAATTTAATTTGTATTTTAAATGAGGATATTAAAGTTGTGGTTTTACCACGCCTAATTCCTCCGTAGTTGTCTTTAATTTTTCAACTATTATCCCACTTAATATATAATTTCTTGATCCACCATTGTGTTACGCATACATAATTCGTGTTAACACTAGCTTAAATAAAGATATTCACCTTTAGTAGATAGATATTAAAGGTGTGGTTTTACCATGCCTAATTCCTTCGTTATTGTCTTTAATTTTTCAACAATAACCCCACTTAATATATAATTTCTTGATCCACCATTGTGTTTAGCATACATAATTTGCGCCAACACTAGTTTAAATAAAGAATATTCACCTTTAGTAGATATGAACTACTCCGTTTATGAAAGTTCTTTATGTTTTCCGTTTTAGTATGTTCTAGAAAGTTTTTTACACTTTACTTTATACAATTTTTAACATATAAATTAAACATTTATACTCTCATTTAGCTCACTTTAACATGCAACTTGTAATGTTTTATTATAAGAATCCACCATAGCTTACCCACTCGCAATACTTTAATACGAAATATTAATTTTCATCCACTCACATTGTTGTACAATTTATAATCACTCATTTCCCCATTTGTTACCCCACCAATCCACCATTACATGTTCACCAATATTCCTTAATTACCAGACAGAGCTTTCAGCAAGCAAGGCGAGGCTTGAGGGATGAAGGTCAATCGTCTAACACGCAAGGAAAATCAGCATCAGTTATTGATTNCGAGGCTTGAGGGATGAAGGTCAATCGTCTAACACGCAAGGAAAATCAGCATCAGTTATTGATTTGGAAAAGACACCCCCAGAGGAGGATGCAGTGGTGACAGTTACCAGAGAGATAATGTTCGGCACAATCCCAACGACAGTTACTACAAAGACTCTAAATGTGGTTCGTGACAAGCAACATGGACAAGAAGTTTCGCGGACGGGCGAGTAGTTGGTTTAGCTTTCCCCCCCAACCCTATTTGGATGCAAAGCAGTGAAGGGATTGTAAAGTTAAAGGGTGGGGTAGTTTTTGGTAATCTAAATTTGGGTAGTATAGTTGTTTGCATTTTATCATGGATCGGGCTACAAGTTTTTGGGTATTGCCCGACAATCTTTTGTAAAGAGCCATAAACGATAACATGTTAATATAATATTCTCCGTTTTTGCGTAAAAAAAAAATATTCCTTAATTACCGTGTAAATAGTAAACATAAAAATCATTTAAGAACGGAGATAATAGTAGATATTAAACAGGGTAAAAAAAAATCAATGCGAACCCCTGAAGTTTGTGTACTATGGTCTATGCCTCTATGGGCTCTATAGCAATTGGCAAGACGGAGCCAAATTGCCTACTGCCAAAAAACAAACCGGTCATGTGGTACGGTTTATCAATATCAGACTTGTTTCACTCCTTTTTTCATTCTGACGACACCACAACATCCAAACGGCCCAGCCCATATTTATTTTTTACTAATTTTCTATGCATGTGATGCGTGCTTATAATTTCAAAGCGCACACACAATCACACTTATTTGGTTAATTACTTTTTTATTCATTTTTTTTTCTTAGTTTTAAATATTTGGTGATTTTGATATGTATCTTTTAAATTGATCCCCTTTTACGTAATACATTGTAATATAAAAAAGTTTTGTATTAAATTTATTTTTATTTTATAATTTTAGTAAAGGGTGAAATAGGCCAATGAGTATTTACACTGTCCTAGCCGTTTCCTTATATAATAGAGATGATACTCAGTATATACTTAGGAAAAACATATTCATGTGGTATCTTGTTAGTTTAATATATATTTTTCAAATGTCAATTGTTTATAATTTGTACTTATTGATAGTTAAAGATATTAATTATTCAAATCTTGCATTGGCAAACGTGAAAAATAAGGTGTTGCAAGTAAAAAGAACCGAGGGATGTACATATTAAATTTTTTTGACATAGTGATTGAATGCGCTTGTTTTGAACAAGAGGTAGAATTCTCAAATCTTGGCCATTCATAATTTTTTTTGCAAGGATGTTTCACCTAATGGAGGTCAGAATATAAGATTAGAATTAAAGTGCTCTCATTTCCACAGTTCGGCTAAACAAATTTTTGTTTAATTAGTGGAGATTGAACCTCCAATTTTAACTCTGTACGTTAAGTATGTCGTTGTCTAATTTGACGTTGTAATTCGAGTCATGATGAATTGAACTGTACATATAAATTATTTTAATATTGTGACTGAATGCACTTATTTTCAACCCGAGGTAAAATTCTCAAATCTTAGCCACTCATTTTTTTTTTTTTTTTTGCAAAGATCCTTCGTCTAACGGGGATGAGAATTCAAGATCGGAAAATGCTCGATCTCATTTCCACGGCTCTACTAAACCAAATTTTGTTTAATTAATGGAGATATCCATGCTATATCCATTTTCATTTCAAAAAGAGATATATGGTTTGCATAAGCTCCGAACTTGCAATGTCTAATTTCAACACTAATATTAATATAATATAGAAAAAATATCTTCTGAAAATACTCAAACAAAATTTCATTAAAAAAATATGATAATTATTGTCATTTACAAAATAATTCGGGACATCGCTCGCGCCTAAATACTACTCCCTCCATCCCGGAATACTCGACCCGGTTTGACCGGCACAGAGTTTAAGGGACTTGAATTGACTTATTTAATTTAATAGGTAGTAGTTGATAGTGGGGTATTATTTTAATGTAGTTAGTGGGAAATGTGTAAAGGGGTGGGGTTGGGGGAGAGTATGGGTTGAATTTTTAATTATTTTTTGTATGGAGTAGGGGTAGGTGGGTTAATAGGGGTGGAGTGAGAAATAATATAATATTATTAGAATATTTCCATTTTTAGAAACAGGTCAAGTATTAAGGGACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAACATTACTAAGAGTCAAAATAAGATAATAATAGTATAAGGGGTAGAATTAGGGATAGAATTACAATAACATTAAAATTCTACCAAAAAGATAACTATTATAGTATATAATATATGTACGTCAATGTTGGTGTTGTGCTTTTGTCAAACAAAAAAAAATGCCGGTGTGTTCTGCTTGATATGGTCTAATGTCTATTGTTTCGAACCATGATACTCCGTATGTTATATTTATTGGTCGATCGAAGTGTATATACTCATGCAATCCCTATATGGCACCATGGTGGCATTCAATTCATGATCGGTATCTACGTTATGATAGCGCACAACTCCTTATGGGTTGCCACTATTATCTTCCTTATGTGTTCTTTCATTGGTATTTCTGCAAATCGGGCCATTTTGCATAACGTGTTGTCCAAGTTACTCTCTGCAACAAATCTAAACCAAAATGGTCGAGCCTTGACCCCAAAAGTGGAGTATTGTGTTTTCCTCCCTCTTCATTGCTAAAATATAATTCAAATTAGTTTTTACATGGAGGTTCATTATTTCTCTTATTCGGAATCATATTGGCTCTGTTATGGAATCTATTCGATCGCGTCGTACCTTAAATGATAAGGTCGTGGTATTTTAAGATATACTTTGTACCTAATAATTAGAATAATTTCCAAAGCGTTTAATGACCACGTTATTCCGTTATCCCATGCCCGATGTTACCCAAGAAGGATTTCAAAATCCTTTACTCCGTACACGTTAACAAAATGTACATGATAGAACTCTTAACTTTCAATTTGCATTAAAAATATCAGGATCGAGCCTAACTGCATGCCTAATGAAAATTTATCTATTTAAACAATTATATTAACTTTCATAAATTTAGTAGTGATTAGGTGAGTCCACATGCATGAAGTTGCACTTATAGAAATTTCATTAAATAAGTTCCTAATATTAGGTCTTTGACCCTTTTTCTTTTTACAAACTTTTCTATAAGGCGGTTTTACACAAAAGACCACCTTGATTAGTTAAGCAAGGGAATTAATTTGTTAAGCAATTGAATCAATTAATTAAGCAATGTAACCAATTAGTTAAGAAATGGAACCAATTAGTTAAGCAACCAAAGTGGTCTTTCCGGTAAGGCGGTCTTACACAAAAGTTGCCGTTTTCTTTTAGGGCAATATATTTCCTATATAAATAAGCCTCTATGGAAGTCGTGAGTTGTATCACACTATCACATAAACACATTTTCCATATTTTTCTCTCGACGTATATTTTCTTTCTAGAGCATAAGTTTGAAGCAGCCAATAATGAGGCCTTTCACTGCTGTTTTTCTGGTCGTCCTCCTTGTCTTGGCCGCAGGTACAAATTAAATCAATAACATAATAAATTAAATACAAATATTATTTTGTCAAATTTAATTACTATGATATAACGCACAACATAATCTCCTTGGATAATATTACTACTCATATAATTATTGTTATTAACTTGGTATGAGTACATACCGAGAAATTCTTTTTCATGGTTCAAATGCTCAGTGACGTAGCCAATGCATAACAAGTAGGGTCACTTGAACCCACTTAACTACTTACTCCGTACATTAGTTGCTTTTTCATTAATTTTAATAATAGTGATCCTGTTTAGCACAATTTCTAGATCCACCACTGTAAATGTTCAATGATTTTTGTAACAATGATCTAAGATGAGGCCGGAGCATAATATATATATACCTTTTGGTTCACAACAATATATCATGGTACAAAACAATCGGCATATACAAATGTTGGTTAATCTTAATCCCCGAGTTTAATGTACTCCGTAAAAGGTTTAATCCACATATTATACTCTTCAAAACTCTACTTTCTCTTGTTATAGAAAAAACGAACGAGGAGAGTTGTCACGTTCTCAAATGTTTGTGCAATGAAACTTTGATTTTTGCAAAATTTTATTAATTTTATTCAATACAAGAATCTGTATCTTTAACGATAACCTAATAACGACGGGTCAAAAATTCCGTTGCAAAAGCCTTTTGCGACGGGGACAAACCACCAAACAAAGACGGGAACAACAGTCACAAATGTCGTTTACAACGGGTTAACGACGAGATTTTTCATTAATGACAACCCCTTTTATGATGGATTTGCGACAGAAAATCCCGTCGCTAATCAACGATTATTGGCATTTAGCGACGGGATTTTCCATCGTTAATGGTACTATTTCTTATAGTGACTGTATTTTATTTTATCAATTTACTAATTTCCTTTTTTTTGTTATGGTAAAGACGTTGGGCCAAGGGTAGCAGAAGCCAGAACATGCGAATCACCAAGTCACAAATTCAAAGGACCATGCGCTACCAACAGAAACTGTGAAAGTGTTTGCCAAACTGAAGGATTCCCAGGAGGTGATTGCAAAGGCCTTCGCCGGAGATGCTTTTGCACTAGGCCTTGCTAATTAAAAAGGGACGGAAAGAGTACGTAATTGTCTTGAAAATGTAACGGCCCGGGTTGCGAAAATTGTACTGGCCGAATGTTATGTGTTTGTGAAAAATAAAGAGTGTTATTTTTATTGCATGAATCTAGATAACTGTAGTACATCATGCAATAATATTATTGTACGTCCGTTTACTATGATTAAAAGGGGTACGTAG

mRNA sequence

ATGTCAATGAGGCCATTTGTTGCTTTCTTCCTTGTGTTCTTACTCGTCTTGACAACAGAGGTAAGTACAAAAGTAGCAGAAGCAAGGATATGTGCTAGTCCAAGTCCCACGTTCAAAGGAATATGTTTTAGCAGCAGGAATTGTGAAACTAATTGCAATTCTGTGAAATTTTCTGGAGGAAGTTGTCAAGGTTTTCGTAGAAGATTGTTGTTATCTTGCTCACTCACCAAATACAACTTCTACAAGTTAATTTCACTAAACATCTTCTTAATTAAGAGCTTAATTATGAAGCAATCAATGAGGCCTTTTGCTGCTATTTTCCTTGTGCTCTTCCTTGTTTTGGCCACAGACATAGGGCCAAGAGTAGTAGAAGCAAGAATGTGTTCATCACCAAGTCATAGGTTCAAGGGAATTTGTACTAGCAGCAGGAATTGTGAGAACACTTGCAACAGCGAACGATTTTCAGGTGGTGAATGTAAAGGCTTTCGCAGAAGATGTCAATCGTCTAACACGCAAGGAAAATCAGCATCAGTTATTGATTTGGAAAAGACACCCCCAGAGGAGGATGCAGTGGTGACAGTTACCAGAGAGATAATGTTCGGCACAATCCCAACGACAGTTACTACAAAGACTCTAAATGTGAGCATAAGTTTGAAGCAGCCAATAATGAGGCCTTTCACTGCTGTTTTTCTGGTCGTCCTCCTTGTCTTGGCCGCAGACGTTGGGCCAAGGGTAGCAGAAGCCAGAACATGCGAATCACCAAGTCACAAATTCAAAGGACCATGCGCTACCAACAGAAACTGTGAAAGTGTTTGCCAAACTGAAGGATTCCCAGGAGGGACGGAAAGAGTACGTAATTGTCTTGAAAATGTAACGGCCCGGGTTGCGAAAATTGTACTGGCCGAATGTTATGTGTTTGTGAAAAATAAAGAGTGTTATTTTTATTGCATGAATCTAGATAACTGTAGTACATCATGCAATAATATTATTGTACGTCCGTTTACTATGATTAAAAGGGGTACGTAG

Coding sequence (CDS)

ATGTCAATGAGGCCATTTGTTGCTTTCTTCCTTGTGTTCTTACTCGTCTTGACAACAGAGGTAAGTACAAAAGTAGCAGAAGCAAGGATATGTGCTAGTCCAAGTCCCACGTTCAAAGGAATATGTTTTAGCAGCAGGAATTGTGAAACTAATTGCAATTCTGTGAAATTTTCTGGAGGAAGTTGTCAAGGTTTTCGTAGAAGATTGTTGTTATCTTGCTCACTCACCAAATACAACTTCTACAAGTTAATTTCACTAAACATCTTCTTAATTAAGAGCTTAATTATGAAGCAATCAATGAGGCCTTTTGCTGCTATTTTCCTTGTGCTCTTCCTTGTTTTGGCCACAGACATAGGGCCAAGAGTAGTAGAAGCAAGAATGTGTTCATCACCAAGTCATAGGTTCAAGGGAATTTGTACTAGCAGCAGGAATTGTGAGAACACTTGCAACAGCGAACGATTTTCAGGTGGTGAATGTAAAGGCTTTCGCAGAAGATGTCAATCGTCTAACACGCAAGGAAAATCAGCATCAGTTATTGATTTGGAAAAGACACCCCCAGAGGAGGATGCAGTGGTGACAGTTACCAGAGAGATAATGTTCGGCACAATCCCAACGACAGTTACTACAAAGACTCTAAATGTGAGCATAAGTTTGAAGCAGCCAATAATGAGGCCTTTCACTGCTGTTTTTCTGGTCGTCCTCCTTGTCTTGGCCGCAGACGTTGGGCCAAGGGTAGCAGAAGCCAGAACATGCGAATCACCAAGTCACAAATTCAAAGGACCATGCGCTACCAACAGAAACTGTGAAAGTGTTTGCCAAACTGAAGGATTCCCAGGAGGGACGGAAAGAGTACGTAATTGTCTTGAAAATGTAACGGCCCGGGTTGCGAAAATTGTACTGGCCGAATGTTATGTGTTTGTGAAAAATAAAGAGTGTTATTTTTATTGCATGAATCTAGATAACTGTAGTACATCATGCAATAATATTATTGTACGTCCGTTTACTATGATTAAAAGGGGTACGTAG

Protein sequence

MSMRPFVAFFLVFLLVLTTEVSTKVAEARICASPSPTFKGICFSSRNCETNCNSVKFSGGSCQGFRRRLLLSCSLTKYNFYKLISLNIFLIKSLIMKQSMRPFAAIFLVLFLVLATDIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFSGGECKGFRRRCQSSNTQGKSASVIDLEKTPPEEDAVVTVTREIMFGTIPTTVTTKTLNVSISLKQPIMRPFTAVFLVVLLVLAADVGPRVAEARTCESPSHKFKGPCATNRNCESVCQTEGFPGGTERVRNCLENVTARVAKIVLAECYVFVKNKECYFYCMNLDNCSTSCNNIIVRPFTMIKRGT
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo27250.1Spo27250.1mRNA


Homology
[Close]
BLAST of Spo27250.1 vs. NCBI nr
Match: gi|902203910|gb|KNA14731.1| (hypothetical protein SOVF_104940 [Spinacia oleracea])

HSP 1 Score: 144.1 bits (362), Expect = 4.600e-31
Identity = 69/71 (97.18%), Postives = 71/71 (100.00%), Query Frame = 1 

		  

Query: 96  MKQSMRPFAAIFLVLFLVLATDIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS 155
           MKQSMRPFAA+FLVLFLVLAT+IGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS
Sbjct: 1   MKQSMRPFAALFLVLFLVLATEIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS 60

Query: 156 GGECKGFRRRC 167
           GGECKGFRRRC
Sbjct: 61  GGECKGFRRRC 71
[Close]
BLAST of Spo27250.1 vs. NCBI nr
Match: gi|870858984|gb|KMT10448.1| (hypothetical protein BVRB_5g115750 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 111.7 bits (278), Expect = 2.600e-21
Identity = 53/71 (74.65%), Postives = 57/71 (80.28%), Query Frame = 1 

		  

Query: 96  MKQSMRPFAAIFLVLFLVLATDIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS 155
           MKQ MRPFAAI L L LVLAT+IGPRV EAR C +PSHRF+GIC S RNCE+ CNSE F 
Sbjct: 1   MKQPMRPFAAILLALLLVLATEIGPRVAEARTCVTPSHRFRGICVSKRNCESACNSEGFP 60

Query: 156 GGECKGFRRRC 167
            G CKGFRRRC
Sbjct: 61  DGNCKGFRRRC 71
[Close]
BLAST of Spo27250.1 vs. NCBI nr
Match: gi|870858985|gb|KMT10449.1| (hypothetical protein BVRB_5g115760 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 111.7 bits (278), Expect = 2.600e-21
Identity = 52/71 (73.24%), Postives = 58/71 (81.69%), Query Frame = 1 

		  

Query: 96  MKQSMRPFAAIFLVLFLVLATDIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS 155
           MKQ MRPFAAI +V  LVLAT+IGPRV EAR C +PSH FKGICT  RNCE+ CNSE F+
Sbjct: 1   MKQPMRPFAAILVVFLLVLATEIGPRVAEARTCDAPSHSFKGICTRKRNCESVCNSEGFA 60

Query: 156 GGECKGFRRRC 167
            G+CKGFRRRC
Sbjct: 61  DGDCKGFRRRC 71
[Close]
BLAST of Spo27250.1 vs. NCBI nr
Match: gi|870858987|gb|KMT10451.1| (hypothetical protein BVRB_5g115780 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 105.5 bits (262), Expect = 1.800e-19
Identity = 47/71 (66.20%), Postives = 57/71 (80.28%), Query Frame = 1 

		  

Query: 96  MKQSMRPFAAIFLVLFLVLATDIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS 155
           MKQSM+P  A FLV  +VL TD+G RV EAR C +PSH+F+GIC SSRNCE+ C++ERF 
Sbjct: 1   MKQSMKPVVAFFLVFLIVLTTDVGTRVAEARTCMTPSHQFRGICVSSRNCESACHTERFP 60

Query: 156 GGECKGFRRRC 167
           GG C+GFRRRC
Sbjct: 61  GGTCQGFRRRC 71
[Close]
BLAST of Spo27250.1 vs. NCBI nr
Match: gi|870858983|gb|KMT10447.1| (hypothetical protein BVRB_5g115740 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 104.0 bits (258), Expect = 5.300e-19
Identity = 49/71 (69.01%), Postives = 56/71 (78.87%), Query Frame = 1 

		  

Query: 96  MKQSMRPFAAIFLVLFLVLATDIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS 155
           MK SM+PFAAIFLVL LVLAT+IGPRV EAR C +PS RF+G+C   RNCE+ CNSE F 
Sbjct: 1   MKLSMKPFAAIFLVLLLVLATEIGPRVAEARTCGTPSQRFRGLCVRKRNCESVCNSEGFP 60

Query: 156 GGECKGFRRRC 167
            G C+G RRRC
Sbjct: 61  DGSCQGARRRC 71
[Close]
BLAST of Spo27250.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R5F0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_104940 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.200e-31
Identity = 69/71 (97.18%), Postives = 71/71 (100.00%), Query Frame = 1 

		  

Query: 96  MKQSMRPFAAIFLVLFLVLATDIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS 155
           MKQSMRPFAA+FLVLFLVLAT+IGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS
Sbjct: 1   MKQSMRPFAALFLVLFLVLATEIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS 60

Query: 156 GGECKGFRRRC 167
           GGECKGFRRRC
Sbjct: 61  GGECKGFRRRC 71
[Close]
BLAST of Spo27250.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CEL9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g115750 PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.800e-21
Identity = 53/71 (74.65%), Postives = 57/71 (80.28%), Query Frame = 1 

		  

Query: 96  MKQSMRPFAAIFLVLFLVLATDIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS 155
           MKQ MRPFAAI L L LVLAT+IGPRV EAR C +PSHRF+GIC S RNCE+ CNSE F 
Sbjct: 1   MKQPMRPFAAILLALLLVLATEIGPRVAEARTCVTPSHRFRGICVSKRNCESACNSEGFP 60

Query: 156 GGECKGFRRRC 167
            G CKGFRRRC
Sbjct: 61  DGNCKGFRRRC 71
[Close]
BLAST of Spo27250.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CE40_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g115760 PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.800e-21
Identity = 52/71 (73.24%), Postives = 58/71 (81.69%), Query Frame = 1 

		  

Query: 96  MKQSMRPFAAIFLVLFLVLATDIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS 155
           MKQ MRPFAAI +V  LVLAT+IGPRV EAR C +PSH FKGICT  RNCE+ CNSE F+
Sbjct: 1   MKQPMRPFAAILVVFLLVLATEIGPRVAEARTCDAPSHSFKGICTRKRNCESVCNSEGFA 60

Query: 156 GGECKGFRRRC 167
            G+CKGFRRRC
Sbjct: 61  DGDCKGFRRRC 71
[Close]
BLAST of Spo27250.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F3X2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g115780 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.300e-19
Identity = 47/71 (66.20%), Postives = 57/71 (80.28%), Query Frame = 1 

		  

Query: 96  MKQSMRPFAAIFLVLFLVLATDIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS 155
           MKQSM+P  A FLV  +VL TD+G RV EAR C +PSH+F+GIC SSRNCE+ C++ERF 
Sbjct: 1   MKQSMKPVVAFFLVFLIVLTTDVGTRVAEARTCMTPSHQFRGICVSSRNCESACHTERFP 60

Query: 156 GGECKGFRRRC 167
           GG C+GFRRRC
Sbjct: 61  GGTCQGFRRRC 71
[Close]
BLAST of Spo27250.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CA30_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g115740 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.700e-19
Identity = 49/71 (69.01%), Postives = 56/71 (78.87%), Query Frame = 1 

		  

Query: 96  MKQSMRPFAAIFLVLFLVLATDIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS 155
           MK SM+PFAAIFLVL LVLAT+IGPRV EAR C +PS RF+G+C   RNCE+ CNSE F 
Sbjct: 1   MKLSMKPFAAIFLVLLLVLATEIGPRVAEARTCGTPSQRFRGLCVRKRNCESVCNSEGFP 60

Query: 156 GGECKGFRRRC 167
            G C+G RRRC
Sbjct: 61  DGSCQGARRRC 71
[Close]
BLAST of Spo27250.1 vs. ExPASy Swiss-Prot
Match: DFSD2_HELAN (Defensin SD2 OS=Helianthus annuus GN=SD2 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 5.900e-18
Identity = 45/72 (62.50%), Postives = 55/72 (76.39%), Query Frame = 1 

		  

Query: 96  MKQSMRPFAAIFLVLFLVLATDIG-PRVVEARMCSSPSHRFKGICTSSRNCENTCNSERF 155
           MK SM+ FAA+ LV+  +LA ++G P VVEAR C S SH+FKG C S  NC N C+SERF
Sbjct: 1   MKSSMKMFAALLLVVMCLLANEMGGPLVVEARTCESQSHKFKGTCLSDTNCANVCHSERF 60

Query: 156 SGGECKGFRRRC 167
           SGG+C+GFRRRC
Sbjct: 61  SGGKCRGFRRRC 72
[Close]
BLAST of Spo27250.1 vs. ExPASy Swiss-Prot
Match: DEF_NELNU (Defensin-like protein OS=Nelumbo nucifera PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.500e-16
Identity = 40/71 (56.34%), Postives = 51/71 (71.83%), Query Frame = 1 

		  

Query: 96  MKQSMRPFAAIFLVLFLVLATDIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS 155
           M++ MR F+++ LVL LV AT++GP+V EAR C S SHRFKG C S  NC + C +E F 
Sbjct: 1   MERGMRLFSSLVLVLLLVTATEMGPKVAEARTCESQSHRFKGACLSDTNCASVCQTEGFP 60

Query: 156 GGECKGFRRRC 167
            G+CKG RRRC
Sbjct: 61  AGDCKGARRRC 71
[Close]
BLAST of Spo27250.1 vs. ExPASy Swiss-Prot
Match: DEF02_ARATH (Defensin-like protein 2 OS=Arabidopsis thaliana GN=PDF2.2 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 9.400e-16
Identity = 39/71 (54.93%), Postives = 50/71 (70.42%), Query Frame = 1 

		  

Query: 96  MKQSMRPFAAIFLVLFLVLATDIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS 155
           MK SMR  +A+ ++  + +AT +GP  VEAR C S SHRFKG C S+ NC N C++E F 
Sbjct: 1   MKLSMRLISAVLIMFMIFVATGMGPVTVEARTCESQSHRFKGTCVSASNCANVCHNEGFV 60

Query: 156 GGECKGFRRRC 167
           GG C+GFRRRC
Sbjct: 61  GGNCRGFRRRC 71
[Close]
BLAST of Spo27250.1 vs. ExPASy Swiss-Prot
Match: DEF04_ARATH (Defensin-like protein 4 OS=Arabidopsis thaliana GN=PDF2.1 PE=2 SV=2)

HSP 1 Score: 84.7 bits (208), Expect = 2.100e-15
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 1 

		  

Query: 96  MKQSMRPFAAIFLVLFLVLATDIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS 155
           MK SMR  +A+  ++ + +AT +GP  VEAR C+S S RFKG C S  NCEN C++E F 
Sbjct: 1   MKFSMRLISAVLFLVMIFVATGMGPVTVEARTCASQSQRFKGKCVSDTNCENVCHNEGFP 60

Query: 156 GGECKGFRRRC 167
           GG+C+GFRRRC
Sbjct: 61  GGDCRGFRRRC 71
[Close]
BLAST of Spo27250.1 vs. ExPASy Swiss-Prot
Match: DEF01_ARATH (Defensin-like protein 1 OS=Arabidopsis thaliana GN=PDF2.3 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 3.600e-15
Identity = 39/71 (54.93%), Postives = 50/71 (70.42%), Query Frame = 1 

		  

Query: 96  MKQSMRPFAAIFLVLFLVLATDIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS 155
           MK S+R  +A  L+  + +AT +GP  VEAR C S SHRFKG C S+ NC N C++E F 
Sbjct: 1   MKLSVRFISAALLLFMVFIATGMGPVTVEARTCESKSHRFKGPCVSTHNCANVCHNEGFG 60

Query: 156 GGECKGFRRRC 167
           GG+C+GFRRRC
Sbjct: 61  GGKCRGFRRRC 71
[Close]
BLAST of Spo27250.1 vs. TAIR (Arabidopsis)
Match: AT2G02100.1 (low-molecular-weight cysteine-rich 69)

HSP 1 Score: 85.9 bits (211), Expect = 5.300e-17
Identity = 39/71 (54.93%), Postives = 50/71 (70.42%), Query Frame = 1 

		  

Query: 96  MKQSMRPFAAIFLVLFLVLATDIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS 155
           MK SMR  +A+ ++  + +AT +GP  VEAR C S SHRFKG C S+ NC N C++E F 
Sbjct: 1   MKLSMRLISAVLIMFMIFVATGMGPVTVEARTCESQSHRFKGTCVSASNCANVCHNEGFV 60

Query: 156 GGECKGFRRRC 167
           GG C+GFRRRC
Sbjct: 61  GGNCRGFRRRC 71
[Close]
BLAST of Spo27250.1 vs. TAIR (Arabidopsis)
Match: AT2G02120.1 (Scorpion toxin-like knottin superfamily protein)

HSP 1 Score: 84.7 bits (208), Expect = 1.200e-16
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 1 

		  

Query: 96  MKQSMRPFAAIFLVLFLVLATDIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS 155
           MK SMR  +A+  ++ + +AT +GP  VEAR C+S S RFKG C S  NCEN C++E F 
Sbjct: 1   MKFSMRLISAVLFLVMIFVATGMGPVTVEARTCASQSQRFKGKCVSDTNCENVCHNEGFP 60

Query: 156 GGECKGFRRRC 167
           GG+C+GFRRRC
Sbjct: 61  GGDCRGFRRRC 71
[Close]
BLAST of Spo27250.1 vs. TAIR (Arabidopsis)
Match: AT2G02130.1 (low-molecular-weight cysteine-rich 68)

HSP 1 Score: 84.0 bits (206), Expect = 2.000e-16
Identity = 39/71 (54.93%), Postives = 50/71 (70.42%), Query Frame = 1 

		  

Query: 96  MKQSMRPFAAIFLVLFLVLATDIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS 155
           MK S+R  +A  L+  + +AT +GP  VEAR C S SHRFKG C S+ NC N C++E F 
Sbjct: 1   MKLSVRFISAALLLFMVFIATGMGPVTVEARTCESKSHRFKGPCVSTHNCANVCHNEGFG 60

Query: 156 GGECKGFRRRC 167
           GG+C+GFRRRC
Sbjct: 61  GGKCRGFRRRC 71
[Close]
BLAST of Spo27250.1 vs. TAIR (Arabidopsis)
Match: AT1G61070.1 (low-molecular-weight cysteine-rich 66)

HSP 1 Score: 71.6 bits (174), Expect = 1.000e-12
Identity = 38/71 (53.52%), Postives = 50/71 (70.42%), Query Frame = 1 

		  

Query: 96  MKQSMRPFAAIFLVLFLVLATDIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS 155
           MK S R  +A+ L+LF++LAT +G   VEAR C + S+ F G C SS NC N C++E FS
Sbjct: 1   MKVSPRLNSAL-LLLFMILATVMGLVTVEARTCETSSNLFNGPCLSSSNCANVCHNEGFS 60

Query: 156 GGECKGFRRRC 167
            G+C+GFRRRC
Sbjct: 61  DGDCRGFRRRC 70
[Close]
BLAST of Spo27250.1 vs. TAIR (Arabidopsis)
Match: AT2G02140.1 (low-molecular-weight cysteine-rich 72)

HSP 1 Score: 67.4 bits (163), Expect = 2.000e-11
Identity = 33/74 (44.59%), Postives = 48/74 (64.86%), Query Frame = 1 

		  

Query: 96  MKQSMRPFAAIFLVLFLVLATDIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS 155
           MK S+R  +A+ + + L+ AT +GP  VEAR C SPS++F+G+C +S++C   C SE FS
Sbjct: 1   MKLSLRLISALLMSVMLLFATGMGP--VEARTCESPSNKFQGVCLNSQSCAKACPSEGFS 60

Query: 156 GGECKGFRRRCQSS 170
           GG C   R  C  +
Sbjct: 61  GGRCSSLRCYCSKA 72
The following BLAST results are available for this feature:
BLAST of Spo27250.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902203910|gb|KNA14731.1|4.6e-3197.1hypothetical protein SOVF_1049... [more]
gi|870858984|gb|KMT10448.1|2.6e-2174.6hypothetical protein BVRB_5g11... [more]
gi|870858985|gb|KMT10449.1|2.6e-2173.2hypothetical protein BVRB_5g11... [more]
gi|870858987|gb|KMT10451.1|1.8e-1966.2hypothetical protein BVRB_5g11... [more]
gi|870858983|gb|KMT10447.1|5.3e-1969.0hypothetical protein BVRB_5g11... [more]
back to top
BLAST of Spo27250.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R5F0_SPIOL3.2e-3197.1Uncharacterized protein OS=Spi... [more]
A0A0J8CEL9_BETVU1.8e-2174.6Uncharacterized protein OS=Bet... [more]
A0A0J8CE40_BETVU1.8e-2173.2Uncharacterized protein OS=Bet... [more]
A0A0J8F3X2_BETVU1.3e-1966.2Uncharacterized protein OS=Bet... [more]
A0A0J8CA30_BETVU3.7e-1969.0Uncharacterized protein OS=Bet... [more]
back to top
BLAST of Spo27250.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
DFSD2_HELAN5.9e-1862.5Defensin SD2 OS=Helianthus ann... [more]
DEF_NELNU5.5e-1656.3Defensin-like protein OS=Nelum... [more]
DEF02_ARATH9.4e-1654.9Defensin-like protein 2 OS=Ara... [more]
DEF04_ARATH2.1e-1554.9Defensin-like protein 4 OS=Ara... [more]
DEF01_ARATH3.6e-1554.9Defensin-like protein 1 OS=Ara... [more]
back to top
BLAST of Spo27250.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT2G02100.15.3e-1754.9low-molecular-weight cysteine-... [more]
AT2G02120.11.2e-1654.9Scorpion toxin-like knottin su... [more]
AT2G02130.12.0e-1654.9low-molecular-weight cysteine-... [more]
AT1G61070.11.0e-1253.5low-molecular-weight cysteine-... [more]
AT2G02140.12.0e-1144.5low-molecular-weight cysteine-... [more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003614Knottin, scorpion toxin-likeGENE3D3.30.30.10coord: 249..281
score: 8.3E-12coord: 126..166
score: 2.0E-14coord: 29..68
score: 1.6
IPR003614Knottin, scorpion toxin-likeSMARTSM00505gth_4coord: 250..287
score: 0.22coord: 30..70
score: 0.0016coord: 127..168
score:
IPR003614Knottin, scorpion toxin-likeunknownSSF57095Scorpion toxin-likecoord: 29..68
score: 1.66E-8coord: 249..281
score: 6.87E-8coord: 126..167
score: 1.33
IPR008176Defensin, plantPRINTSPR00288PUROTHIONINcoord: 250..265
score: 5.8E-6coord: 266..279
score: 5.
IPR008176Defensin, plantPROSITEPS00940GAMMA_THIONINcoord: 29..52
score: -coord: 249..272
score: -coord: 126..149
scor
NoneNo IPR availablePANTHERPTHR33147FAMILY NOT NAMEDcoord: 96..166
score: 5.1
NoneNo IPR availablePFAMPF00304Gamma-thionincoord: 249..281
score: 2.2E-10coord: 126..166
score: 1.9E-11coord: 29..68
score: 5.9

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043481 anthocyanin accumulation in tissues in response to UV light
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0042548 regulation of photosynthesis, light reaction
biological_process GO:0006468 protein phosphorylation
biological_process GO:0048481 plant ovule development
biological_process GO:0042793 plastid transcription
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0006569 tryptophan catabolic process
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0000023 maltose metabolic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0019760 glucosinolate metabolic process
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0009611 response to wounding
biological_process GO:0009805 coumarin biosynthetic process
biological_process GO:0009684 indoleacetic acid biosynthetic process
biological_process GO:0008152 metabolic process
biological_process GO:0040007 growth
biological_process GO:0006108 malate metabolic process
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0006952 defense response
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0006364 rRNA processing
biological_process GO:0019643 reductive tricarboxylic acid cycle
biological_process GO:0006090 pyruvate metabolic process
biological_process GO:0009657 plastid organization
biological_process GO:0010207 photosystem II assembly
biological_process GO:0046487 glyoxylate metabolic process
biological_process GO:0009902 chloroplast relocation
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0015976 carbon utilization
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0010155 regulation of proton transport
biological_process GO:0016311 dephosphorylation
biological_process GO:0009926 auxin polar transport
biological_process GO:0006863 purine nucleobase transport
biological_process GO:0003333 amino acid transmembrane transport
biological_process GO:0009637 response to blue light
biological_process GO:0008283 cell proliferation
biological_process GO:0007275 multicellular organism development
biological_process GO:0016042 lipid catabolic process
biological_process GO:0048767 root hair elongation
biological_process GO:0009627 systemic acquired resistance
biological_process GO:0009723 response to ethylene
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009817 defense response to fungus, incompatible interaction
biological_process GO:0030154 cell differentiation
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0006979 response to oxidative stress
biological_process GO:0008361 regulation of cell size
biological_process GO:0000271 polysaccharide biosynthetic process
biological_process GO:0007389 pattern specification process
biological_process GO:0009825 multidimensional cell growth
biological_process GO:0031640 killing of cells of other organism
biological_process GO:0050832 defense response to fungus
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0071555 cell wall organization
biological_process GO:0009932 cell tip growth
biological_process GO:0006606 protein import into nucleus
biological_process GO:0009414 response to water deprivation
biological_process GO:0006508 proteolysis
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0015996 chlorophyll catabolic process
biological_process GO:0007165 signal transduction
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0042026 protein refolding
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0015979 photosynthesis
biological_process GO:0042742 defense response to bacterium
biological_process GO:0006810 transport
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0055085 transmembrane transport
biological_process GO:0006811 ion transport
biological_process GO:0044238 primary metabolic process
biological_process GO:0071704 organic substance metabolic process
biological_process GO:0044237 cellular metabolic process
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0005840 ribosome
cellular_component GO:0009507 chloroplast
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0031012 extracellular matrix
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0019898 extrinsic component of membrane
cellular_component GO:0009654 photosystem II oxygen evolving complex
cellular_component GO:0009523 photosystem II
cellular_component GO:0009543 chloroplast thylakoid lumen
cellular_component GO:0016020 membrane
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005622 intracellular
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005829 cytosol
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0048046 apoplast
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009579 thylakoid
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0005576 extracellular region
molecular_function GO:0004721 phosphoprotein phosphatase activity
molecular_function GO:0020037 heme binding
molecular_function GO:0016298 lipase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0030145 manganese ion binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0005215 transporter activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0008083 growth factor activity
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0030414 peptidase inhibitor activity
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0008565 protein transporter activity
molecular_function GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
molecular_function GO:0052663 antheraxanthin epoxidase activity
molecular_function GO:0030060 L-malate dehydrogenase activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0016791 phosphatase activity
molecular_function GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0008253 5'-nucleotidase activity
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0052662 zeaxanthin epoxidase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0009540 zeaxanthin epoxidase [overall] activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0046554 malate dehydrogenase (NADP+) activity
molecular_function GO:0051087 chaperone binding
molecular_function GO:0008233 peptidase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo256890.74Barchart | Table
Spo259530.73Barchart | Table
Spo282670.73Barchart | Table
Spo026490.73Barchart | Table
Spo213610.72Barchart | Table
Spo011070.72Barchart | Table
Spo072370.72Barchart | Table
Spo144730.71Barchart | Table
Spo248470.70Barchart | Table
Spo219560.70Barchart | Table
Spo216310.70Barchart | Table
Spo120050.69Barchart | Table
Spo140160.69Barchart | Table
Spo224720.69Barchart | Table
Spo076330.69Barchart | Table
Spo118600.69Barchart | Table
Spo142640.68Barchart | Table
Spo150790.68Barchart | Table
Spo188440.68Barchart | Table
Spo300010.68Barchart | Table
Spo212740.67Barchart | Table
Spo039070.67Barchart | Table
Spo050130.67Barchart | Table
Spo077020.67Barchart | Table
Spo169120.67Barchart | Table
Spo206480.67Barchart | Table
Spo002560.67Barchart | Table
Spo230350.67Barchart | Table
Spo240720.67Barchart | Table
Spo252620.67Barchart | Table
Spo272490.67Barchart | Table
Spo194440.66Barchart | Table
Spo094120.66Barchart | Table
Spo215810.66Barchart | Table
Spo093780.66Barchart | Table
Spo011350.66Barchart | Table
Spo241450.66Barchart | Table
Spo150740.66Barchart | Table
Spo122400.66Barchart | Table
Spo119640.66Barchart | Table
Spo193930.66Barchart | Table
Spo194310.66Barchart | Table
Spo265200.65Barchart | Table
Spo021920.65Barchart | Table
Spo049540.65Barchart | Table
Spo018270.65Barchart | Table
Spo088110.65Barchart | Table
Spo055080.65Barchart | Table
Spo271360.65Barchart | Table
Spo230440.65Barchart | Table
Spo234150.65Barchart | Table
Spo047190.65Barchart | Table