Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCACCACCACATGGAGAAGCCGTTCTTTCATCCTTCCCCATCCCAACAAGAAACTTCTCCAAACCACCAAGGTTATCTAACGACAACCTAAAAAGGACGGTTTCTGACATTGCTTTTGAATTAAGCAAAGAGATTGATAGAGAAATAGAAGAGTCGTCACAACTAGCACTACCACCTATTTCTGAGGCACAAGATGCAAAGTGTGAGTGTTGTGGAATGAGTGAAGAGTACACACCTGAGTACATAAAACGTGTACGTGACAAGTTTCTAGGTAAGTGGATATGTGGGTTGTGCTCTGAAGCCGTTAAAGAAGAAATGGAGAAAAATGGAGGAATGTGTAAAGAAGCCCTAGAAACTCACATGAGCCATTGTCATAGGTTCAATAAGCTCGGTAGGGCTTATCCGGTTCTATGTCAAGCTCAAGCCATGAGAGAGATTTTGAAGAAGAGTACTAGGATTAGGGCTAAGTCTATGAGCCCTAGAGATAACGTGAACCTCAAGAAAGGTGGCATAACTAGGAGTTCAAGTTGCATGCCTTCCATGATGAATGACCTTACTCTTAACAACTAA ATGGCACCACCACATGGAGAAGCCGTTCTTTCATCCTTCCCCATCCCAACAAGAAACTTCTCCAAACCACCAAGGTTATCTAACGACAACCTAAAAAGGACGGTTTCTGACATTGCTTTTGAATTAAGCAAAGAGATTGATAGAGAAATAGAAGAGTCGTCACAACTAGCACTACCACCTATTTCTGAGGCACAAGATGCAAAGTGTGAGTGTTGTGGAATGAGTGAAGAGTACACACCTGAGTACATAAAACGTGTACGTGACAAGTTTCTAGGTAAGTGGATATGTGGGTTGTGCTCTGAAGCCGTTAAAGAAGAAATGGAGAAAAATGGAGGAATGTGTAAAGAAGCCCTAGAAACTCACATGAGCCATTGTCATAGGTTCAATAAGCTCGGTAGGGCTTATCCGGTTCTATGTCAAGCTCAAGCCATGAGAGAGATTTTGAAGAAGAGTACTAGGATTAGGGCTAAGTCTATGAGCCCTAGAGATAACGTGAACCTCAAGAAAGGTGGCATAACTAGGAGTTCAAGTTGCATGCCTTCCATGATGAATGACCTTACTCTTAACAACTAA ATGGCACCACCACATGGAGAAGCCGTTCTTTCATCCTTCCCCATCCCAACAAGAAACTTCTCCAAACCACCAAGGTTATCTAACGACAACCTAAAAAGGACGGTTTCTGACATTGCTTTTGAATTAAGCAAAGAGATTGATAGAGAAATAGAAGAGTCGTCACAACTAGCACTACCACCTATTTCTGAGGCACAAGATGCAAAGTGTGAGTGTTGTGGAATGAGTGAAGAGTACACACCTGAGTACATAAAACGTGTACGTGACAAGTTTCTAGGTAAGTGGATATGTGGGTTGTGCTCTGAAGCCGTTAAAGAAGAAATGGAGAAAAATGGAGGAATGTGTAAAGAAGCCCTAGAAACTCACATGAGCCATTGTCATAGGTTCAATAAGCTCGGTAGGGCTTATCCGGTTCTATGTCAAGCTCAAGCCATGAGAGAGATTTTGAAGAAGAGTACTAGGATTAGGGCTAAGTCTATGAGCCCTAGAGATAACGTGAACCTCAAGAAAGGTGGCATAACTAGGAGTTCAAGTTGCATGCCTTCCATGATGAATGACCTTACTCTTAACAACTAA MAPPHGEAVLSSFPIPTRNFSKPPRLSNDNLKRTVSDIAFELSKEIDREIEESSQLALPPISEAQDAKCECCGMSEEYTPEYIKRVRDKFLGKWICGLCSEAVKEEMEKNGGMCKEALETHMSHCHRFNKLGRAYPVLCQAQAMREILKKSTRIRAKSMSPRDNVNLKKGGITRSSSCMPSMMNDLTLNN Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo27367.1 vs. NCBI nr
Match: gi|902234306|gb|KNA23402.1| (hypothetical protein SOVF_025130 [Spinacia oleracea]) HSP 1 Score: 386.0 bits (990), Expect = 3.900e-104 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 1
BLAST of Spo27367.1 vs. NCBI nr
Match: gi|731359698|ref|XP_010691421.1| (PREDICTED: uncharacterized protein LOC104904752 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 321.2 bits (822), Expect = 1.200e-84 Identity = 161/191 (84.29%), Postives = 173/191 (90.58%), Query Frame = 1
BLAST of Spo27367.1 vs. NCBI nr
Match: gi|731402323|ref|XP_010654629.1| (PREDICTED: uncharacterized protein LOC100254824 [Vitis vinifera]) HSP 1 Score: 253.8 bits (647), Expect = 2.300e-64 Identity = 135/199 (67.84%), Postives = 155/199 (77.89%), Query Frame = 1
BLAST of Spo27367.1 vs. NCBI nr
Match: gi|823221170|ref|XP_012443277.1| (PREDICTED: uncharacterized protein LOC105768084 [Gossypium raimondii]) HSP 1 Score: 236.5 bits (602), Expect = 3.800e-59 Identity = 129/205 (62.93%), Postives = 156/205 (76.10%), Query Frame = 1
BLAST of Spo27367.1 vs. NCBI nr
Match: gi|734305806|gb|KHM98723.1| (hypothetical protein glysoja_030776 [Glycine soja]) HSP 1 Score: 235.0 bits (598), Expect = 1.100e-58 Identity = 127/197 (64.47%), Postives = 152/197 (77.16%), Query Frame = 1
BLAST of Spo27367.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RX23_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_025130 PE=4 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 2.700e-104 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 1
BLAST of Spo27367.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BIU0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g221780 PE=4 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 8.300e-85 Identity = 161/191 (84.29%), Postives = 173/191 (90.58%), Query Frame = 1
BLAST of Spo27367.1 vs. UniProtKB/TrEMBL
Match: F6HYB2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g03710 PE=4 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 1.600e-64 Identity = 135/199 (67.84%), Postives = 155/199 (77.89%), Query Frame = 1
BLAST of Spo27367.1 vs. UniProtKB/TrEMBL
Match: A0A0D2S0D9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G136900 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 2.700e-59 Identity = 129/205 (62.93%), Postives = 156/205 (76.10%), Query Frame = 1
BLAST of Spo27367.1 vs. UniProtKB/TrEMBL
Match: A0A0B2NU11_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_030776 PE=4 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 7.800e-59 Identity = 127/197 (64.47%), Postives = 152/197 (77.16%), Query Frame = 1
BLAST of Spo27367.1 vs. TAIR (Arabidopsis)
Match: AT5G25840.1 (Protein of unknown function (DUF1677)) HSP 1 Score: 151.8 bits (382), Expect = 4.400e-37 Identity = 84/169 (49.70%), Postives = 112/169 (66.27%), Query Frame = 1
BLAST of Spo27367.1 vs. TAIR (Arabidopsis)
Match: AT1G79770.1 (Protein of unknown function (DUF1677)) HSP 1 Score: 147.5 bits (371), Expect = 8.300e-36 Identity = 83/165 (50.30%), Postives = 109/165 (66.06%), Query Frame = 1
BLAST of Spo27367.1 vs. TAIR (Arabidopsis)
Match: AT2G25780.1 (Protein of unknown function (DUF1677)) HSP 1 Score: 88.2 bits (217), Expect = 6.000e-18 Identity = 52/155 (33.55%), Postives = 82/155 (52.90%), Query Frame = 1
BLAST of Spo27367.1 vs. TAIR (Arabidopsis)
Match: AT4G14819.1 (Protein of unknown function (DUF1677)) HSP 1 Score: 86.7 bits (213), Expect = 1.700e-17 Identity = 41/100 (41.00%), Postives = 60/100 (60.00%), Query Frame = 1
BLAST of Spo27367.1 vs. TAIR (Arabidopsis)
Match: AT1G72510.1 (Protein of unknown function (DUF1677)) HSP 1 Score: 80.1 bits (196), Expect = 1.600e-15 Identity = 48/132 (36.36%), Postives = 73/132 (55.30%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo27367.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo27367.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo27367.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo27367.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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