Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCACCACCTTCTTCTTCCAGCTGCAACCCTCCTCTTAACCCTCCTCTTTCTCTCTCCTCCCACGGCCACGGCCAAGGACTCGGTAGTCCTAGACGTGGACGGGAACCCAGTAGAAGCAGGGTCACAATACTACGTCCTCACTTCTGGATGGGGTGGAGCAGGCCGTGGTGGCCTAACCGCTGCATCACTCGGTGGCCCGTGCCCTTTATACGTAGGTCAATATAGGCTATGGGTTCAAAAGGGCAGCCCAGTAACATTCTACCCTTCCAACCCTTCACAAAAACACATCACACAAAGTTCAGACGTCAACATTGCTTTCGCCCCAAACCCAATCTGCAGAAACCAAGGGGTTTGGCAGCTGGGTTACAATGGCATTTCATTCTACATAACTACTAATGGAGTTATTGGAAAGCAAGAAGATGTCGACACATTCGCCAATTGGTTCAAGATCGAACAAGCAGGAGGGTTACCAGGAGCATACAAGATAGTGTATTGTTTCGCCGTACCAAGTACTGGTCCTGAACCTGTTGTTCCTGATAGTCGTCGTCGTACTGGTCCTGAACCTGATACTGAGTATTGTGAACAGTTGGATGCTACTGTACCCGTGCCGCCGATGGGTTTGTCGTTGTTAACTCCGGTACCCATTGATAATCCTCTACCCTTCTTTGGCTTTGTATTCAAGAAGGTTAACACTACTGCCAATCATAGCTACTAG ATGGCTCACCACCTTCTTCTTCCAGCTGCAACCCTCCTCTTAACCCTCCTCTTTCTCTCTCCTCCCACGGCCACGGCCAAGGACTCGGTAGTCCTAGACGTGGACGGGAACCCAGTAGAAGCAGGGTCACAATACTACGTCCTCACTTCTGGATGGGGTGGAGCAGGCCGTGGTGGCCTAACCGCTGCATCACTCGGTGGCCCGTGCCCTTTATACGTAGGTCAATATAGGCTATGGGTTCAAAAGGGCAGCCCAGTAACATTCTACCCTTCCAACCCTTCACAAAAACACATCACACAAAGTTCAGACGTCAACATTGCTTTCGCCCCAAACCCAATCTGCAGAAACCAAGGGGTTTGGCAGCTGGGTTACAATGGCATTTCATTCTACATAACTACTAATGGAGTTATTGGAAAGCAAGAAGATGTCGACACATTCGCCAATTGGTTCAAGATCGAACAAGCAGGAGGGTTACCAGGAGCATACAAGATAGTGTATTGTTTCGCCGTACCAAGTACTGGTCCTGAACCTGTTGTTCCTGATAGTCGTCGTCGTACTGGTCCTGAACCTGATACTGAGTATTGTGAACAGTTGGATGCTACTGTACCCGTGCCGCCGATGGGTTTGTCGTTGTTAACTCCGGTACCCATTGATAATCCTCTACCCTTCTTTGGCTTTGTATTCAAGAAGGTTAACACTACTGCCAATCATAGCTACTAG ATGGCTCACCACCTTCTTCTTCCAGCTGCAACCCTCCTCTTAACCCTCCTCTTTCTCTCTCCTCCCACGGCCACGGCCAAGGACTCGGTAGTCCTAGACGTGGACGGGAACCCAGTAGAAGCAGGGTCACAATACTACGTCCTCACTTCTGGATGGGGTGGAGCAGGCCGTGGTGGCCTAACCGCTGCATCACTCGGTGGCCCGTGCCCTTTATACGTAGGTCAATATAGGCTATGGGTTCAAAAGGGCAGCCCAGTAACATTCTACCCTTCCAACCCTTCACAAAAACACATCACACAAAGTTCAGACGTCAACATTGCTTTCGCCCCAAACCCAATCTGCAGAAACCAAGGGGTTTGGCAGCTGGGTTACAATGGCATTTCATTCTACATAACTACTAATGGAGTTATTGGAAAGCAAGAAGATGTCGACACATTCGCCAATTGGTTCAAGATCGAACAAGCAGGAGGGTTACCAGGAGCATACAAGATAGTGTATTGTTTCGCCGTACCAAGTACTGGTCCTGAACCTGTTGTTCCTGATAGTCGTCGTCGTACTGGTCCTGAACCTGATACTGAGTATTGTGAACAGTTGGATGCTACTGTACCCGTGCCGCCGATGGGTTTGTCGTTGTTAACTCCGGTACCCATTGATAATCCTCTACCCTTCTTTGGCTTTGTATTCAAGAAGGTTAACACTACTGCCAATCATAGCTACTAG MAHHLLLPAATLLLTLLFLSPPTATAKDSVVLDVDGNPVEAGSQYYVLTSGWGGAGRGGLTAASLGGPCPLYVGQYRLWVQKGSPVTFYPSNPSQKHITQSSDVNIAFAPNPICRNQGVWQLGYNGISFYITTNGVIGKQEDVDTFANWFKIEQAGGLPGAYKIVYCFAVPSTGPEPVVPDSRRRTGPEPDTEYCEQLDATVPVPPMGLSLLTPVPIDNPLPFFGFVFKKVNTTANHSY Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo28094.1 vs. NCBI nr
Match: gi|902228865|gb|KNA21296.1| (hypothetical protein SOVF_044550 [Spinacia oleracea]) HSP 1 Score: 496.5 bits (1277), Expect = 2.600e-137 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 1
BLAST of Spo28094.1 vs. NCBI nr
Match: gi|902188089|gb|KNA11068.1| (hypothetical protein SOVF_138590 [Spinacia oleracea]) HSP 1 Score: 336.7 bits (862), Expect = 3.400e-89 Identity = 169/235 (71.91%), Postives = 190/235 (80.85%), Query Frame = 1
BLAST of Spo28094.1 vs. NCBI nr
Match: gi|902228866|gb|KNA21297.1| (hypothetical protein SOVF_044560 [Spinacia oleracea]) HSP 1 Score: 302.4 bits (773), Expect = 7.200e-79 Identity = 169/245 (68.98%), Postives = 191/245 (77.96%), Query Frame = 1
BLAST of Spo28094.1 vs. NCBI nr
Match: gi|902188088|gb|KNA11067.1| (hypothetical protein SOVF_138580 [Spinacia oleracea]) HSP 1 Score: 297.7 bits (761), Expect = 1.800e-77 Identity = 162/236 (68.64%), Postives = 181/236 (76.69%), Query Frame = 1
BLAST of Spo28094.1 vs. NCBI nr
Match: gi|902078036|gb|KNA03096.1| (hypothetical protein SOVF_212410 [Spinacia oleracea]) HSP 1 Score: 240.0 bits (611), Expect = 4.400e-60 Identity = 135/216 (62.50%), Postives = 156/216 (72.22%), Query Frame = 1
BLAST of Spo28094.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RP34_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_044550 PE=4 SV=1) HSP 1 Score: 496.5 bits (1277), Expect = 1.800e-137 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 1
BLAST of Spo28094.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QWG7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_138590 PE=4 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 2.400e-89 Identity = 169/235 (71.91%), Postives = 190/235 (80.85%), Query Frame = 1
BLAST of Spo28094.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RR37_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_044560 PE=4 SV=1) HSP 1 Score: 302.4 bits (773), Expect = 5.000e-79 Identity = 169/245 (68.98%), Postives = 191/245 (77.96%), Query Frame = 1
BLAST of Spo28094.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QUV4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_138580 PE=4 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 1.200e-77 Identity = 162/236 (68.64%), Postives = 181/236 (76.69%), Query Frame = 1
BLAST of Spo28094.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q9A5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_212410 PE=4 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 3.000e-60 Identity = 135/216 (62.50%), Postives = 156/216 (72.22%), Query Frame = 1
BLAST of Spo28094.1 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 7.800e-17 Identity = 63/170 (37.06%), Postives = 91/170 (53.53%), Query Frame = 1
BLAST of Spo28094.1 vs. ExPASy Swiss-Prot
Match: MIRA_SYNDU (Miraculin OS=Synsepalum dulcificum PE=1 SV=3) HSP 1 Score: 75.5 bits (184), Expect = 8.900e-13 Identity = 53/156 (33.97%), Postives = 80/156 (51.28%), Query Frame = 1
BLAST of Spo28094.1 vs. ExPASy Swiss-Prot
Match: DRTI_DELRE (Kunitz-type serine protease inhibitor DrTI OS=Delonix regia PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.100e-10 Identity = 44/140 (31.43%), Postives = 67/140 (47.86%), Query Frame = 1
BLAST of Spo28094.1 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 9.200e-10 Identity = 47/147 (31.97%), Postives = 72/147 (48.98%), Query Frame = 1
BLAST of Spo28094.1 vs. ExPASy Swiss-Prot
Match: SPORB_IPOBA (Sporamin B OS=Ipomoea batatas GN=GSPO-B1 PE=2 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.700e-9 Identity = 52/156 (33.33%), Postives = 71/156 (45.51%), Query Frame = 1
BLAST of Spo28094.1 vs. TAIR (Arabidopsis)
Match: AT1G73325.1 (Kunitz family trypsin and protease inhibitor protein) HSP 1 Score: 59.7 bits (143), Expect = 2.900e-9 Identity = 49/162 (30.25%), Postives = 80/162 (49.38%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo28094.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo28094.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo28094.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo28094.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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