Spo28098 (gene) | SpinachBase

Overview


Name	Spo28098
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Mitochondrial import receptor subunit TOM7-1
Location	chr1 : 47043087 .. 47043290 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATGCCGAAAGGAAAGGGAAGAAAAGCTCGAGTTGAAGAAGAAGCTTGCAATACCTTGAAGTGCGTGCAAGATTGGACTAATTGGAGTTTGAAGAAGGCTAAAGTTATCACTCACTATGGTTTAATTCCTCTGATCATCTACATCGGGATGAACTCTGAGCCTAAGCCTACTCTTTCTCAGCTTCTCTCTCCTTTTTAA

mRNA sequence

ATGGCGATGCCGAAAGGAAAGGGAAGAAAAGCTCGAGTTGAAGAAGAAGCTTGCAATACCTTGAAGTGCGTGCAAGATTGGACTAATTGGAGTTTGAAGAAGGCTAAAGTTATCACTCACTATGGTTTAATTCCTCTGATCATCTACATCGGGATGAACTCTGAGCCTAAGCCTACTCTTTCTCAGCTTCTCTCTCCTTTTTAA

Coding sequence (CDS)

ATGGCGATGCCGAAAGGAAAGGGAAGAAAAGCTCGAGTTGAAGAAGAAGCTTGCAATACCTTGAAGTGCGTGCAAGATTGGACTAATTGGAGTTTGAAGAAGGCTAAAGTTATCACTCACTATGGTTTAATTCCTCTGATCATCTACATCGGGATGAACTCTGAGCCTAAGCCTACTCTTTCTCAGCTTCTCTCTCCTTTTTAA

Protein sequence

MAMPKGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTLSQLLSPF

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo28098.1	Spo28098.1	mRNA

Homology

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BLAST of Spo28098.1 vs. NCBI nr
Match: gi|902225733|gb|KNA20165.1| (hypothetical protein SOVF_054820 [Spinacia oleracea])

HSP 1 Score: 143.7 bits (361), Expect = 1.200e-31
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 1

		  
Query: 1  MAMPKGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTL 60
          MAMPKGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTL
Sbjct: 1  MAMPKGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTL 60

Query: 61 SQLLSPF 68
          SQLLSPF
Sbjct: 61 SQLLSPF 67

[Close]

BLAST of Spo28098.1 vs. NCBI nr
Match: gi|731368403|ref|XP_010696128.1| (PREDICTED: mitochondrial import receptor subunit TOM7-1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 122.9 bits (307), Expect = 2.200e-25
Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 1

		  
Query: 1  MAMPKGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTL 60
          MAM KGKGRKAR EEEA  TLKCV+DWTNWSLKKA+VITHYGLIPLIIYIGMNSEPKPT+
Sbjct: 1  MAM-KGKGRKARDEEEAGKTLKCVKDWTNWSLKKARVITHYGLIPLIIYIGMNSEPKPTI 60

Query: 61 SQLLSPF 68
          SQLLSPF
Sbjct: 61 SQLLSPF 66

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BLAST of Spo28098.1 vs. NCBI nr
Match: gi|720023747|ref|XP_010263429.1| (PREDICTED: mitochondrial import receptor subunit TOM7-1-like [Nelumbo nucifera])

HSP 1 Score: 90.1 bits (222), Expect = 1.600e-15
Identity = 41/63 (65.08%), Postives = 51/63 (80.95%), Query Frame = 1

		  
Query: 5  KGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTLSQLL 64
          K  GR    EE +  T+KC++DW+ W++KKAKVITHYG IPL+I IG+NSEPKPTLSQLL
Sbjct: 29 KVSGRSEASEERS--TVKCLKDWSTWTMKKAKVITHYGFIPLVIIIGVNSEPKPTLSQLL 88

Query: 65 SPF 68
          +PF
Sbjct: 89 TPF 89

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BLAST of Spo28098.1 vs. NCBI nr
Match: gi|769824907|ref|XP_011623506.1| (PREDICTED: mitochondrial import receptor subunit TOM7-1-like [Amborella trichopoda])

HSP 1 Score: 89.7 bits (221), Expect = 2.000e-15
Identity = 40/64 (62.50%), Postives = 52/64 (81.25%), Query Frame = 1

		  
Query: 5  KGKGRKARVE-EEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTLSQL 64
          KGKG+  +++  E  + +KCV++W+ W+LKKAKV+ HYG IPLII IGMNSEPKP LSQL
Sbjct: 8  KGKGKLGKIKGSEPPSKMKCVKEWSTWTLKKAKVVAHYGFIPLIIVIGMNSEPKPYLSQL 67

Query: 65 LSPF 68
          +SPF
Sbjct: 68 VSPF 71

[Close]

BLAST of Spo28098.1 vs. NCBI nr
Match: gi|225443425|ref|XP_002269243.1| (PREDICTED: mitochondrial import receptor subunit TOM7-2 [Vitis vinifera])

HSP 1 Score: 89.4 bits (220), Expect = 2.700e-15
Identity = 41/65 (63.08%), Postives = 51/65 (78.46%), Query Frame = 1

		  
Query: 5  KGKGRKARVEE---EACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTLS 64
          KGKG+  +  +   E  +T KC++DW+NW+LKKAKVITHYG IP++I IGMNSEPKP L 
Sbjct: 8  KGKGKSIKGSKDGSEGHSTAKCLKDWSNWALKKAKVITHYGFIPMVIIIGMNSEPKPQLY 67

Query: 65 QLLSP 67
          QLLSP
Sbjct: 68 QLLSP 72

[Close]

BLAST of Spo28098.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RKZ7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_054820 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 8.300e-32
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 1

		  
Query: 1  MAMPKGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTL 60
          MAMPKGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTL
Sbjct: 1  MAMPKGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTL 60

Query: 61 SQLLSPF 68
          SQLLSPF
Sbjct: 61 SQLLSPF 67

[Close]

BLAST of Spo28098.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BAX4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g177880 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.500e-25
Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 1

		  
Query: 1  MAMPKGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTL 60
          MAM KGKGRKAR EEEA  TLKCV+DWTNWSLKKA+VITHYGLIPLIIYIGMNSEPKPT+
Sbjct: 1  MAM-KGKGRKARDEEEAGKTLKCVKDWTNWSLKKARVITHYGLIPLIIYIGMNSEPKPTI 60

Query: 61 SQLLSPF 68
          SQLLSPF
Sbjct: 61 SQLLSPF 66

[Close]

BLAST of Spo28098.1 vs. UniProtKB/TrEMBL
Match: Q0WLA8_ARATH (TOM7-like protein OS=Arabidopsis thaliana GN=At5g41685 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 9.200e-15
Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 1

		  
Query: 5  KGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTLSQLL 64
          KGKG K     +  +    V++WTNWSLKKAKV+THYG IPL+I++GMNS+PKP L QLL
Sbjct: 13 KGKGSKGASSSDDKSKFDVVKEWTNWSLKKAKVVTHYGFIPLVIFVGMNSDPKPHLFQLL 72

Query: 65 SP 67
          SP
Sbjct: 73 SP 74

[Close]

BLAST of Spo28098.1 vs. UniProtKB/TrEMBL
Match: S8C8K7_9LAMI (Uncharacterized protein OS=Genlisea aurea GN=M569_11578 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.200e-14
Identity = 44/66 (66.67%), Postives = 48/66 (72.73%), Query Frame = 1

		  
Query: 3  MPKGKGRKARVEEE--ACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTL 62
          M K K   A  EEE  A    K V+ W+NW LKKAKVITHYG IPLII IGMNSEPKP++
Sbjct: 15 MSKKKAAAAEGEEEGSAAAATKLVKQWSNWGLKKAKVITHYGFIPLIIIIGMNSEPKPSI 74

Query: 63 SQLLSP 67
          SQLLSP
Sbjct: 75 SQLLSP 80

[Close]

BLAST of Spo28098.1 vs. UniProtKB/TrEMBL
Match: M0TBX8_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.200e-14
Identity = 41/61 (67.21%), Postives = 46/61 (75.41%), Query Frame = 1

		  
Query: 6  GKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTLSQLLS 65
          GKG K   E  AC   KC ++W+ W++KKAKVITHYG IPLII IGMNSEPKP L QLLS
Sbjct: 14 GKGSKGPEERSAC---KCFKEWSTWAMKKAKVITHYGFIPLIITIGMNSEPKPQLYQLLS 71

Query: 66 P 67
          P
Sbjct: 74 P 71

[Close]

BLAST of Spo28098.1 vs. ExPASy Swiss-Prot
Match: TOM71_ARATH (Mitochondrial import receptor subunit TOM7-1 OS=Arabidopsis thaliana GN=TOM7-1 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 8.300e-17
Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 1

		  
Query: 5  KGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTLSQLL 64
          KGKG K     +  +    V++WTNWSLKKAKV+THYG IPL+I++GMNS+PKP L QLL
Sbjct: 13 KGKGSKGASSSDDKSKFDVVKEWTNWSLKKAKVVTHYGFIPLVIFVGMNSDPKPHLFQLL 72

Query: 65 SP 67
          SP
Sbjct: 73 SP 74

[Close]

BLAST of Spo28098.1 vs. ExPASy Swiss-Prot
Match: TOM7A_SOLTU (Mitochondrial import receptor subunit TOM7-1 OS=Solanum tuberosum GN=TOM7-1 PE=3 SV=3)

HSP 1 Score: 81.6 bits (200), Expect = 3.500e-15
Identity = 42/71 (59.15%), Postives = 50/71 (70.42%), Query Frame = 1

		  
Query: 1  MAMPKGKG-RKARVEEEACNTL----KCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSE 60
          M  PKGK  +KA   +E    +    K V++W  W+ KKAKVITHYG IPL+I IGMNSE
Sbjct: 1  MLKPKGKNTKKAAAADEDDGAVAVVGKFVKEWGTWTAKKAKVITHYGFIPLVIIIGMNSE 60

Query: 61 PKPTLSQLLSP 67
          PKP+LSQLLSP
Sbjct: 61 PKPSLSQLLSP 71

[Close]

BLAST of Spo28098.1 vs. ExPASy Swiss-Prot
Match: TOM72_ARATH (Mitochondrial import receptor subunit TOM7-2 OS=Arabidopsis thaliana GN=TOM7-2 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.300e-14
Identity = 37/60 (61.67%), Postives = 42/60 (70.00%), Query Frame = 1

		  
Query: 7  KGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTLSQLLSP 66
          KG  +     A +  K  +DWTNWSL+KAKV THYG IPLII IGMNS+PKP L  LLSP
Sbjct: 17 KGSSSSSSSSASSKYKVFKDWTNWSLQKAKVATHYGFIPLIIIIGMNSDPKPHLFHLLSP 76

[Close]

BLAST of Spo28098.1 vs. TAIR (Arabidopsis)
Match: AT5G41685.1 (Mitochondrial outer membrane translocase complex, subunit Tom7)

HSP 1 Score: 87.0 bits (214), Expect = 4.700e-18
Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 1

		  
Query: 5  KGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTLSQLL 64
          KGKG K     +  +    V++WTNWSLKKAKV+THYG IPL+I++GMNS+PKP L QLL
Sbjct: 13 KGKGSKGASSSDDKSKFDVVKEWTNWSLKKAKVVTHYGFIPLVIFVGMNSDPKPHLFQLL 72

Query: 65 SP 67
          SP
Sbjct: 73 SP 74

[Close]

BLAST of Spo28098.1 vs. TAIR (Arabidopsis)
Match: AT1G64220.1 (translocase of outer membrane 7 kDa subunit 2)

HSP 1 Score: 79.7 bits (195), Expect = 7.500e-16
Identity = 37/60 (61.67%), Postives = 42/60 (70.00%), Query Frame = 1

		  
Query: 7  KGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTLSQLLSP 66
          KG  +     A +  K  +DWTNWSL+KAKV THYG IPLII IGMNS+PKP L  LLSP
Sbjct: 17 KGSSSSSSSSASSKYKVFKDWTNWSLQKAKVATHYGFIPLIIIIGMNSDPKPHLFHLLSP 76

The following BLAST results are available for this feature:

BLAST of Spo28098.1 vs. NCBI nr
BLAST of Spo28098.1 vs. UniProtKB/TrEMBL
BLAST of Spo28098.1 vs. ExPASy Swiss-Prot
BLAST of Spo28098.1 vs. TAIR (Arabidopsis)

BLAST of Spo28098.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902225733\|gb\|KNA20165.1\|	1.2e-31	100.	hypothetical protein SOVF_0548...	[more]
gi\|731368403\|ref\|XP_010696128.1\|	2.2e-25	89.5	PREDICTED: mitochondrial impor...	[more]
gi\|720023747\|ref\|XP_010263429.1\|	1.6e-15	65.0	PREDICTED: mitochondrial impor...	[more]
gi\|769824907\|ref\|XP_011623506.1\|	2.0e-15	62.5	PREDICTED: mitochondrial impor...	[more]
gi\|225443425\|ref\|XP_002269243.1\|	2.7e-15	63.0	PREDICTED: mitochondrial impor...	[more]

BLAST of Spo28098.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9RKZ7_SPIOL	8.3e-32	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BAX4_BETVU	1.5e-25	89.5	Uncharacterized protein OS=Bet...	[more]
Q0WLA8_ARATH	9.2e-15	61.2	TOM7-like protein OS=Arabidops...	[more]
S8C8K7_9LAMI	1.2e-14	66.6	Uncharacterized protein OS=Gen...	[more]
M0TBX8_MUSAM	1.2e-14	67.2	Uncharacterized protein OS=Mus...	[more]

BLAST of Spo28098.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3

Position :

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x 1


Match Name	E-value	Identity	Description
TOM71_ARATH	8.3e-17	61.2	Mitochondrial import receptor ...	[more]
TOM7A_SOLTU	3.5e-15	59.1	Mitochondrial import receptor ...	[more]
TOM72_ARATH	1.3e-14	61.6	Mitochondrial import receptor ...	[more]

BLAST of Spo28098.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT5G41685.1	4.7e-18	61.2	Mitochondrial outer membrane t...	[more]
AT1G64220.1	7.5e-16	61.6	translocase of outer membrane ...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012621	Mitochondrial import receptor subunit TOM7	PFAM	PF08038	Tom7	coord: 26..64 score: 4.6
None	No IPR available	PANTHER	PTHR34944	FAMILY NOT NAMED	coord: 1..67 score: 1.6
None	No IPR available	PANTHER	PTHR34944:SF2	MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM7-1-RELATED	coord: 1..67 score: 1.6

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030150	protein import into mitochondrial matrix
biological_process	GO:0009853	photorespiration
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0016049	cell growth
biological_process	GO:0000902	cell morphogenesis
biological_process	GO:0007030	Golgi organization
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0006972	hyperosmotic response
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0003333	amino acid transmembrane transport
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0006863	purine nucleobase transport
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0009266	response to temperature stimulus
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0007033	vacuole organization
biological_process	GO:0009741	response to brassinosteroid
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0042545	cell wall modification
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0001510	RNA methylation
biological_process	GO:0045040	protein import into mitochondrial outer membrane
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0010951	negative regulation of endopeptidase activity
biological_process	GO:0009060	aerobic respiration
biological_process	GO:0006123	mitochondrial electron transport, cytochrome c to oxygen
biological_process	GO:0071806	protein transmembrane transport
biological_process	GO:0006508	proteolysis
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0032544	plastid translation
biological_process	GO:0000105	histidine biosynthetic process
biological_process	GO:0006021	inositol biosynthetic process
biological_process	GO:0046854	phosphatidylinositol phosphorylation
biological_process	GO:0019872	streptomycin biosynthetic process
biological_process	GO:0060003	copper ion export
biological_process	GO:0008152	metabolic process
biological_process	GO:0006833	water transport
biological_process	GO:0006547	histidine metabolic process
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0009697	salicylic acid biosynthetic process
biological_process	GO:0006465	signal peptide processing
biological_process	GO:0009306	protein secretion
biological_process	GO:0008380	RNA splicing
biological_process	GO:0006457	protein folding
biological_process	GO:0009814	defense response, incompatible interaction
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009409	response to cold
biological_process	GO:0006414	translational elongation
biological_process	GO:0009657	plastid organization
biological_process	GO:0009738	abscisic acid-activated signaling pathway
biological_process	GO:0030968	endoplasmic reticulum unfolded protein response
biological_process	GO:0035556	intracellular signal transduction
biological_process	GO:0009695	jasmonic acid biosynthetic process
biological_process	GO:0010200	response to chitin
biological_process	GO:0009620	response to fungus
biological_process	GO:0009753	response to jasmonic acid
biological_process	GO:0009611	response to wounding
biological_process	GO:0016070	RNA metabolic process
biological_process	GO:1901576	organic substance biosynthetic process
biological_process	GO:0006427	histidyl-tRNA aminoacylation
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0031990	mRNA export from nucleus in response to heat stress
biological_process	GO:0000288	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
biological_process	GO:0045948	positive regulation of translational initiation
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0034402	recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex
biological_process	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation
biological_process	GO:0006367	transcription initiation from RNA polymerase II promoter
biological_process	GO:0009902	chloroplast relocation
biological_process	GO:0042793	plastid transcription
biological_process	GO:0009987	cellular process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0006364	rRNA processing
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0015991	ATP hydrolysis coupled proton transport
biological_process	GO:0006119	oxidative phosphorylation
biological_process	GO:0009058	biosynthetic process
biological_process	GO:0044249	cellular biosynthetic process
biological_process	GO:0006810	transport
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0044281	small molecule metabolic process
biological_process	GO:0046777	protein autophosphorylation
biological_process	GO:0008283	cell proliferation
biological_process	GO:0071840	cellular component organization or biogenesis
biological_process	GO:0034660	ncRNA metabolic process
biological_process	GO:0044085	cellular component biogenesis
biological_process	GO:0009627	systemic acquired resistance
biological_process	GO:0044375	regulation of peroxisome size
biological_process	GO:0016043	cellular component organization
biological_process	GO:0031347	regulation of defense response
biological_process	GO:0019682	glyceraldehyde-3-phosphate metabolic process
biological_process	GO:0006139	nucleobase-containing compound metabolic process
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0016559	peroxisome fission
biological_process	GO:0046034	ATP metabolic process
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0006354	DNA-templated transcription, elongation
biological_process	GO:0010048	vernalization response
biological_process	GO:0048573	photoperiodism, flowering
biological_process	GO:0097034	obsolete mitochondrial respiratory chain complex IV biogenesis
biological_process	GO:0097031	obsolete mitochondrial respiratory chain complex I biogenesis
biological_process	GO:0000956	nuclear-transcribed mRNA catabolic process
biological_process	GO:0006397	mRNA processing
biological_process	GO:0000373	Group II intron splicing
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0046939	nucleotide phosphorylation
biological_process	GO:0000914	phragmoplast assembly
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0051604	protein maturation
biological_process	GO:0009767	photosynthetic electron transport chain
biological_process	GO:0010342	endosperm cellularization
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0006544	glycine metabolic process
biological_process	GO:0006096	glycolytic process
biological_process	GO:0006563	L-serine metabolic process
biological_process	GO:0006499	N-terminal protein myristoylation
biological_process	GO:0009165	nucleotide biosynthetic process
biological_process	GO:0009651	response to salt stress
biological_process	GO:0097056	selenocysteinyl-tRNA(Sec) biosynthetic process
biological_process	GO:0006434	seryl-tRNA aminoacylation
biological_process	GO:0006566	threonine metabolic process
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0080005	photosystem stoichiometry adjustment
biological_process	GO:0006412	translation
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0019013	viral nucleocapsid
cellular_component	GO:0005840	ribosome
cellular_component	GO:0044424	intracellular part
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0009840	chloroplastic endopeptidase Clp complex
cellular_component	GO:0010319	stromule
cellular_component	GO:0005665	DNA-directed RNA polymerase II, core complex
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009536	plastid
cellular_component	GO:0005829	cytosol
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0005732	small nucleolar ribonucleoprotein complex
cellular_component	GO:0000932	P-body
cellular_component	GO:0016272	prefoldin complex
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005681	spliceosomal complex
cellular_component	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0022626	cytosolic ribosome
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005742	mitochondrial outer membrane translocase complex
cellular_component	GO:0005751	mitochondrial respiratory chain complex IV
cellular_component	GO:0005744	mitochondrial inner membrane presequence translocase complex
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0016471	vacuolar proton-transporting V-type ATPase complex
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005618	cell wall
cellular_component	GO:0008287	protein serine/threonine phosphatase complex
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0045298	tubulin complex
cellular_component	GO:0005779	integral component of peroxisomal membrane
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009707	chloroplast outer membrane
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0004869	cysteine-type endopeptidase inhibitor activity
molecular_function	GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function	GO:0031177	phosphopantetheine binding
molecular_function	GO:0004828	serine-tRNA ligase activity
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004821	histidine-tRNA ligase activity
molecular_function	GO:0004129	cytochrome-c oxidase activity
molecular_function	GO:0008266	poly(U) RNA binding
molecular_function	GO:0004017	adenylate kinase activity
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0004722	protein serine/threonine phosphatase activity
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0008565	protein transporter activity
molecular_function	GO:0008934	inositol monophosphate 1-phosphatase activity
molecular_function	GO:0031369	translation initiation factor binding
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0042626	ATPase activity, coupled to transmembrane movement of substances
molecular_function	GO:0004177	aminopeptidase activity
molecular_function	GO:0004008	copper-exporting ATPase activity
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0052833	inositol monophosphate 4-phosphatase activity
molecular_function	GO:0052832	inositol monophosphate 3-phosphatase activity
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0003727	single-stranded RNA binding
molecular_function	GO:0004401	histidinol-phosphatase activity
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0015171	amino acid transmembrane transporter activity
molecular_function	GO:0004596	peptide alpha-N-acetyltransferase activity
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0003735	structural constituent of ribosome

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo21768	0.83	Barchart \| Table
Spo07955	0.79	Barchart \| Table
Spo01305	0.78	Barchart \| Table
Spo03074	0.75	Barchart \| Table
Spo20071	0.74	Barchart \| Table
Spo05547	0.74	Barchart \| Table
Spo09803	0.74	Barchart \| Table
Spo30034	0.74	Barchart \| Table
Spo17110	0.74	Barchart \| Table
Spo07306	0.74	Barchart \| Table
Spo21027	0.73	Barchart \| Table
Spo13107	0.73	Barchart \| Table
Spo15302	0.73	Barchart \| Table
Spo02272	0.73	Barchart \| Table
Spo25918	0.73	Barchart \| Table
Spo03708	0.73	Barchart \| Table
Spo00566	0.73	Barchart \| Table
Spo17622	0.73	Barchart \| Table
Spo11951	0.73	Barchart \| Table
Spo15517	0.72	Barchart \| Table
Spo06146	0.72	Barchart \| Table
Spo13731	0.72	Barchart \| Table
Spo08589	0.71	Barchart \| Table
Spo07599	0.71	Barchart \| Table
Spo27210	0.71	Barchart \| Table
Spo16969	0.71	Barchart \| Table
Spo23652	0.70	Barchart \| Table
Spo24414	0.70	Barchart \| Table
Spo19459	0.70	Barchart \| Table
Spo18103	0.70	Barchart \| Table
Spo03306	0.70	Barchart \| Table
Spo27346	0.70	Barchart \| Table
Spo07206	0.70	Barchart \| Table
Spo00400	0.69	Barchart \| Table
Spo01923	0.69	Barchart \| Table
Spo09604	0.69	Barchart \| Table
Spo10916	0.69	Barchart \| Table
Spo12302	0.69	Barchart \| Table
Spo12959	0.69	Barchart \| Table
Spo18775	0.69	Barchart \| Table
Spo21531	0.69	Barchart \| Table
Spo26986	0.69	Barchart \| Table
Spo27102	0.69	Barchart \| Table
Spo18111	0.68	Barchart \| Table
Spo07596	0.68	Barchart \| Table
Spo02085	0.68	Barchart \| Table
Spo17135	0.68	Barchart \| Table
Spo22326	0.68	Barchart \| Table
Spo20686	0.68	Barchart \| Table
Spo12894	0.68	Barchart \| Table
Spo07928	0.68	Barchart \| Table
Spo02513	0.67	Barchart \| Table
Spo11739	0.67	Barchart \| Table
Spo17679	0.67	Barchart \| Table
Spo06670	0.67	Barchart \| Table
Spo20163	0.67	Barchart \| Table
Spo04868	0.67	Barchart \| Table
Spo21802	0.67	Barchart \| Table
Spo22507	0.67	Barchart \| Table
Spo23285	0.67	Barchart \| Table
Spo24857	0.67	Barchart \| Table
Spo26636	0.67	Barchart \| Table
Spo27374	0.67	Barchart \| Table
Spo16989	0.67	Barchart \| Table
Spo24983	0.66	Barchart \| Table
Spo17161	0.66	Barchart \| Table
Spo18828	0.66	Barchart \| Table
Spo19268	0.66	Barchart \| Table
Spo18185	0.66	Barchart \| Table
Spo26958	0.66	Barchart \| Table
Spo21376	0.66	Barchart \| Table
Spo23384	0.66	Barchart \| Table
Spo03882	0.66	Barchart \| Table
Spo03654	0.66	Barchart \| Table
Spo20835	0.66	Barchart \| Table
Spo05833	0.66	Barchart \| Table
Spo00854	0.66	Barchart \| Table
Spo20952	0.65	Barchart \| Table
Spo17124	0.65	Barchart \| Table
Spo22006	0.65	Barchart \| Table
Spo00501	0.65	Barchart \| Table
Spo27169	0.65	Barchart \| Table
Spo14523	0.65	Barchart \| Table
Spo17016	0.65	Barchart \| Table
Spo19863	0.65	Barchart \| Table
Spo13490	0.65	Barchart \| Table
Spo26857	0.65	Barchart \| Table
Spo20387	0.65	Barchart \| Table
Spo10473	0.65	Barchart \| Table