Spo28324 (gene)

Overview
NameSpo28324
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPlant/F25P12-18 protein
Locationchr6 : 2756431 .. 2756916 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAACCAATTGATCGAAACCCACCGCGAAGGAGCGGAAGTATACTCCACCCCAGACCTCTGTAAGGCAAAATCATATGAATTGCTCGAAGAACTCGACATGCCCAACGGTCTCCTACCCATGAATGAGATGATAGAAGTTGGGTATAACCGCACGACCGGGTTCGTGTGGTTAATCCAGAAAGAACTGGTGAAACACCATTTCGAAAAGATTGATAGAAAGGTGACTTATGATACAGTTGTTACAGCTTTTGTTGAGAAGCATAAGATGAAGAAGCTTCATGGGGTTAAGGCGAAGGAGATGATGATTTGGTTACCTCTTAATGAAATTTACATTGGTTCGGATTCTACTAAGATTACCTTTGGTTCTTATACCGGTATTTCCCGCTCTTTTCCTGTTTCTGCTTTTATTGAAGAGGTGAAGAAAGTCGAAGAAGAGAAAAAGGTGGAAGAAGAGAAAAAGGTGGAAGAAATTAAAGCATAG

mRNA sequence

ATGGCAAACCAATTGATCGAAACCCACCGCGAAGGAGCGGAAGTATACTCCACCCCAGACCTCTGTAAGGCAAAATCATATGAATTGCTCGAAGAACTCGACATGCCCAACGGTCTCCTACCCATGAATGAGATGATAGAAGTTGGGTATAACCGCACGACCGGGTTCGTGTGGTTAATCCAGAAAGAACTGGTGAAACACCATTTCGAAAAGATTGATAGAAAGGTGACTTATGATACAGTTGTTACAGCTTTTGTTGAGAAGCATAAGATGAAGAAGCTTCATGGGGTTAAGGCGAAGGAGATGATGATTTGGTTACCTCTTAATGAAATTTACATTGGTTCGGATTCTACTAAGATTACCTTTGGTTCTTATACCGGTATTTCCCGCTCTTTTCCTGTTTCTGCTTTTATTGAAGAGGTGAAGAAAGTCGAAGAAGAGAAAAAGGTGGAAGAAGAGAAAAAGGTGGAAGAAATTAAAGCATAG

Coding sequence (CDS)

ATGGCAAACCAATTGATCGAAACCCACCGCGAAGGAGCGGAAGTATACTCCACCCCAGACCTCTGTAAGGCAAAATCATATGAATTGCTCGAAGAACTCGACATGCCCAACGGTCTCCTACCCATGAATGAGATGATAGAAGTTGGGTATAACCGCACGACCGGGTTCGTGTGGTTAATCCAGAAAGAACTGGTGAAACACCATTTCGAAAAGATTGATAGAAAGGTGACTTATGATACAGTTGTTACAGCTTTTGTTGAGAAGCATAAGATGAAGAAGCTTCATGGGGTTAAGGCGAAGGAGATGATGATTTGGTTACCTCTTAATGAAATTTACATTGGTTCGGATTCTACTAAGATTACCTTTGGTTCTTATACCGGTATTTCCCGCTCTTTTCCTGTTTCTGCTTTTATTGAAGAGGTGAAGAAAGTCGAAGAAGAGAAAAAGGTGGAAGAAGAGAAAAAGGTGGAAGAAATTAAAGCATAG

Protein sequence

MANQLIETHREGAEVYSTPDLCKAKSYELLEELDMPNGLLPMNEMIEVGYNRTTGFVWLIQKELVKHHFEKIDRKVTYDTVVTAFVEKHKMKKLHGVKAKEMMIWLPLNEIYIGSDSTKITFGSYTGISRSFPVSAFIEEVKKVEEEKKVEEEKKVEEIKA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo28324.1Spo28324.1mRNA


Homology
[Close]
BLAST of Spo28324.1 vs. NCBI nr
Match: gi|902182590|gb|KNA09950.1| (hypothetical protein SOVF_148740 [Spinacia oleracea])

HSP 1 Score: 317.0 bits (811), Expect = 1.900e-83
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1 

		  

Query: 1   MANQLIETHREGAEVYSTPDLCKAKSYELLEELDMPNGLLPMNEMIEVGYNRTTGFVWLI 60
           MANQLIETHREGAEVYSTPDLCKAKSYELLEELDMPNGLLPMNEMIEVGYNRTTGFVWLI
Sbjct: 1   MANQLIETHREGAEVYSTPDLCKAKSYELLEELDMPNGLLPMNEMIEVGYNRTTGFVWLI 60

Query: 61  QKELVKHHFEKIDRKVTYDTVVTAFVEKHKMKKLHGVKAKEMMIWLPLNEIYIGSDSTKI 120
           QKELVKHHFEKIDRKVTYDTVVTAFVEKHKMKKLHGVKAKEMMIWLPLNEIYIGSDSTKI
Sbjct: 61  QKELVKHHFEKIDRKVTYDTVVTAFVEKHKMKKLHGVKAKEMMIWLPLNEIYIGSDSTKI 120

Query: 121 TFGSYTGISRSFPVSAFIEEVKKVEEEKKVEEEKKVEEIKA 162
           TFGSYTGISRSFPVSAFIEEVKKVEEEKKVEEEKKVEEIKA
Sbjct: 121 TFGSYTGISRSFPVSAFIEEVKKVEEEKKVEEEKKVEEIKA 161
[Close]
BLAST of Spo28324.1 vs. NCBI nr
Match: gi|731326893|ref|XP_010674249.1| (PREDICTED: uncharacterized protein LOC104890449 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 189.9 bits (481), Expect = 3.500e-45
Identity = 94/143 (65.73%), Postives = 115/143 (80.42%), Query Frame = 1 

		  

Query: 1   MANQLIETHREGAEVYSTPDLCKAKSYELLEELDMPNGLLPMNEMIEVGYNRTTGFVWLI 60
           M+ Q IE HREGAE+Y+   +CK KS ELL E++MPNGLLPM++  EVGYNR+TGFVWL 
Sbjct: 1   MSAQFIEKHREGAEIYTGAQICKQKSLELLLEINMPNGLLPMDDFEEVGYNRSTGFVWLT 60

Query: 61  QKELVKHHFEKIDRKVTYDTVVTAFVEKHKMKKLHGVKAKEMMIWLPLNEIYIGSD-STK 120
           QK+ V+H F KI ++V+YDT VTAFVE  +MKKLHGVKAKE++IW+ LNEIYI    S K
Sbjct: 61  QKKPVQHKFTKIGKQVSYDTHVTAFVENQRMKKLHGVKAKELLIWISLNEIYIDDPASGK 120

Query: 121 ITFGSYTGISRSFPVSAFIEEVK 143
           ITFG+ TGISRS+P+SAF EE K
Sbjct: 121 ITFGTPTGISRSYPISAFEEEKK 143
[Close]
BLAST of Spo28324.1 vs. NCBI nr
Match: gi|902189878|gb|KNA11491.1| (hypothetical protein SOVF_134730 [Spinacia oleracea])

HSP 1 Score: 186.4 bits (472), Expect = 3.900e-44
Identity = 93/143 (65.03%), Postives = 114/143 (79.72%), Query Frame = 1 

		  

Query: 1   MANQLIETHREGAEVYSTPDLCKAKSYELLEELDMPNGLLPMNEMIEVGYNRTTGFVWLI 60
           M+ Q IE HRE AE++S  DLCK KS ELL EL+MPNGLLPM+++ EVGYNR+TGFVWL 
Sbjct: 1   MSAQFIERHRENAEIFSGSDLCKQKSIELLVELNMPNGLLPMDDIEEVGYNRSTGFVWLT 60

Query: 61  QKELVKHHFEKIDRKVTYDTVVTAFVEKHKMKKLHGVKAKEMMIWLPLNEIYIGSDST-K 120
           QK+ ++H F KI ++V+YDT VTAFVE  KMKKLHGVKAKE++IW+ LNEI I   S+ K
Sbjct: 61  QKKAIQHRFTKIGKQVSYDTHVTAFVENRKMKKLHGVKAKELLIWITLNEISIDDPSSGK 120

Query: 121 ITFGSYTGISRSFPVSAFIEEVK 143
           I FG+ TGISRS+P+SAF  E K
Sbjct: 121 IVFGTPTGISRSYPISAFEVENK 143
[Close]
BLAST of Spo28324.1 vs. NCBI nr
Match: gi|255557315|ref|XP_002519688.1| (PREDICTED: uncharacterized protein LOC8264116 [Ricinus communis])

HSP 1 Score: 171.8 bits (434), Expect = 9.800e-40
Identity = 85/150 (56.67%), Postives = 115/150 (76.67%), Query Frame = 1 

		  

Query: 1   MANQLIETHREGAEVYSTPDLCKAKSYELLEELDMPNGLLPMNEMIEVGYNRTTGFVWLI 60
           MA+Q I  HR+ AE+Y    LCK KS ELLEE+ +P GLLP+++++EVGYNRTTGFVWL 
Sbjct: 1   MASQRIANHRDEAEIYLGESLCKQKSIELLEEIRLPKGLLPLDDIVEVGYNRTTGFVWLK 60

Query: 61  QKELVKHHFEKIDRKVTYDTVVTAFVEKHKMKKLHGVKAKEMMIWLPLNEIYIG-SDSTK 120
           QK    H F +I R V YDT VTAFVE  +MK+L GVK+KE++IW+ +++IY+  +D++K
Sbjct: 61  QKNSKNHRFREIGRNVNYDTEVTAFVEDRRMKRLTGVKSKELLIWVTISDIYVDHNDNSK 120

Query: 121 ITFGSYTGISRSFPVSAFIEEVKKVEEEKK 150
           ITFG+ +GISR+FPVSAF     +++EEKK
Sbjct: 121 ITFGNPSGISRTFPVSAF-----QLQEEKK 145
[Close]
BLAST of Spo28324.1 vs. NCBI nr
Match: gi|224078982|ref|XP_002305706.1| (hypothetical protein POPTR_0004s06350g [Populus trichocarpa])

HSP 1 Score: 170.6 bits (431), Expect = 2.200e-39
Identity = 86/150 (57.33%), Postives = 114/150 (76.00%), Query Frame = 1 

		  

Query: 1   MANQLIETHREGAEVYSTPDLCKAKSYELLEELDMPNGLLPMNEMIEVGYNRTTGFVWLI 60
           M +Q I THRE AE+++   LCK KS ELLEE+ +P GLLP+++++EVGYNRTTGFVWL 
Sbjct: 1   MTSQHIATHREKAEIHTGESLCKQKSLELLEEIHLPMGLLPLDDIVEVGYNRTTGFVWLK 60

Query: 61  QKELVKHHFEKIDRKVTYDTVVTAFVEKHKMKKLHGVKAKEMMIWLPLNEIYIG-SDSTK 120
           QK+   H F KI R+V+YDT VTAFVE  +M++L GVK KE++ W+ +++IY+   D  K
Sbjct: 61  QKKRKDHRFLKIGRQVSYDTEVTAFVENRRMRRLTGVKTKELLFWVSISDIYVDEKDLEK 120

Query: 121 ITFGSYTGISRSFPVSAFIEEVKKVEEEKK 150
           ITFG+ TGISR+FPVSAF     ++EEEKK
Sbjct: 121 ITFGNPTGISRTFPVSAF-----ELEEEKK 145
[Close]
BLAST of Spo28324.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QRS8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_148740 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.300e-83
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1 

		  

Query: 1   MANQLIETHREGAEVYSTPDLCKAKSYELLEELDMPNGLLPMNEMIEVGYNRTTGFVWLI 60
           MANQLIETHREGAEVYSTPDLCKAKSYELLEELDMPNGLLPMNEMIEVGYNRTTGFVWLI
Sbjct: 1   MANQLIETHREGAEVYSTPDLCKAKSYELLEELDMPNGLLPMNEMIEVGYNRTTGFVWLI 60

Query: 61  QKELVKHHFEKIDRKVTYDTVVTAFVEKHKMKKLHGVKAKEMMIWLPLNEIYIGSDSTKI 120
           QKELVKHHFEKIDRKVTYDTVVTAFVEKHKMKKLHGVKAKEMMIWLPLNEIYIGSDSTKI
Sbjct: 61  QKELVKHHFEKIDRKVTYDTVVTAFVEKHKMKKLHGVKAKEMMIWLPLNEIYIGSDSTKI 120

Query: 121 TFGSYTGISRSFPVSAFIEEVKKVEEEKKVEEEKKVEEIKA 162
           TFGSYTGISRSFPVSAFIEEVKKVEEEKKVEEEKKVEEIKA
Sbjct: 121 TFGSYTGISRSFPVSAFIEEVKKVEEEKKVEEEKKVEEIKA 161
[Close]
BLAST of Spo28324.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CPD4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g077350 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.400e-45
Identity = 94/143 (65.73%), Postives = 115/143 (80.42%), Query Frame = 1 

		  

Query: 1   MANQLIETHREGAEVYSTPDLCKAKSYELLEELDMPNGLLPMNEMIEVGYNRTTGFVWLI 60
           M+ Q IE HREGAE+Y+   +CK KS ELL E++MPNGLLPM++  EVGYNR+TGFVWL 
Sbjct: 1   MSAQFIEKHREGAEIYTGAQICKQKSLELLLEINMPNGLLPMDDFEEVGYNRSTGFVWLT 60

Query: 61  QKELVKHHFEKIDRKVTYDTVVTAFVEKHKMKKLHGVKAKEMMIWLPLNEIYIGSD-STK 120
           QK+ V+H F KI ++V+YDT VTAFVE  +MKKLHGVKAKE++IW+ LNEIYI    S K
Sbjct: 61  QKKPVQHKFTKIGKQVSYDTHVTAFVENQRMKKLHGVKAKELLIWISLNEIYIDDPASGK 120

Query: 121 ITFGSYTGISRSFPVSAFIEEVK 143
           ITFG+ TGISRS+P+SAF EE K
Sbjct: 121 ITFGTPTGISRSYPISAFEEEKK 143
[Close]
BLAST of Spo28324.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QY79_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_134730 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.700e-44
Identity = 93/143 (65.03%), Postives = 114/143 (79.72%), Query Frame = 1 

		  

Query: 1   MANQLIETHREGAEVYSTPDLCKAKSYELLEELDMPNGLLPMNEMIEVGYNRTTGFVWLI 60
           M+ Q IE HRE AE++S  DLCK KS ELL EL+MPNGLLPM+++ EVGYNR+TGFVWL 
Sbjct: 1   MSAQFIERHRENAEIFSGSDLCKQKSIELLVELNMPNGLLPMDDIEEVGYNRSTGFVWLT 60

Query: 61  QKELVKHHFEKIDRKVTYDTVVTAFVEKHKMKKLHGVKAKEMMIWLPLNEIYIGSDST-K 120
           QK+ ++H F KI ++V+YDT VTAFVE  KMKKLHGVKAKE++IW+ LNEI I   S+ K
Sbjct: 61  QKKAIQHRFTKIGKQVSYDTHVTAFVENRKMKKLHGVKAKELLIWITLNEISIDDPSSGK 120

Query: 121 ITFGSYTGISRSFPVSAFIEEVK 143
           I FG+ TGISRS+P+SAF  E K
Sbjct: 121 IVFGTPTGISRSYPISAFEVENK 143
[Close]
BLAST of Spo28324.1 vs. UniProtKB/TrEMBL
Match: B9S119_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0632890 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 6.900e-40
Identity = 85/150 (56.67%), Postives = 115/150 (76.67%), Query Frame = 1 

		  

Query: 1   MANQLIETHREGAEVYSTPDLCKAKSYELLEELDMPNGLLPMNEMIEVGYNRTTGFVWLI 60
           MA+Q I  HR+ AE+Y    LCK KS ELLEE+ +P GLLP+++++EVGYNRTTGFVWL 
Sbjct: 1   MASQRIANHRDEAEIYLGESLCKQKSIELLEEIRLPKGLLPLDDIVEVGYNRTTGFVWLK 60

Query: 61  QKELVKHHFEKIDRKVTYDTVVTAFVEKHKMKKLHGVKAKEMMIWLPLNEIYIG-SDSTK 120
           QK    H F +I R V YDT VTAFVE  +MK+L GVK+KE++IW+ +++IY+  +D++K
Sbjct: 61  QKNSKNHRFREIGRNVNYDTEVTAFVEDRRMKRLTGVKSKELLIWVTISDIYVDHNDNSK 120

Query: 121 ITFGSYTGISRSFPVSAFIEEVKKVEEEKK 150
           ITFG+ +GISR+FPVSAF     +++EEKK
Sbjct: 121 ITFGNPSGISRTFPVSAF-----QLQEEKK 145
[Close]
BLAST of Spo28324.1 vs. UniProtKB/TrEMBL
Match: B9H2B8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s06350g PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.500e-39
Identity = 86/150 (57.33%), Postives = 114/150 (76.00%), Query Frame = 1 

		  

Query: 1   MANQLIETHREGAEVYSTPDLCKAKSYELLEELDMPNGLLPMNEMIEVGYNRTTGFVWLI 60
           M +Q I THRE AE+++   LCK KS ELLEE+ +P GLLP+++++EVGYNRTTGFVWL 
Sbjct: 1   MTSQHIATHREKAEIHTGESLCKQKSLELLEEIHLPMGLLPLDDIVEVGYNRTTGFVWLK 60

Query: 61  QKELVKHHFEKIDRKVTYDTVVTAFVEKHKMKKLHGVKAKEMMIWLPLNEIYIG-SDSTK 120
           QK+   H F KI R+V+YDT VTAFVE  +M++L GVK KE++ W+ +++IY+   D  K
Sbjct: 61  QKKRKDHRFLKIGRQVSYDTEVTAFVENRRMRRLTGVKTKELLFWVSISDIYVDEKDLEK 120

Query: 121 ITFGSYTGISRSFPVSAFIEEVKKVEEEKK 150
           ITFG+ TGISR+FPVSAF     ++EEEKK
Sbjct: 121 ITFGNPTGISRTFPVSAF-----ELEEEKK 145
[Close]
BLAST of Spo28324.1 vs. TAIR (Arabidopsis)
Match: AT1G09310.1 (Protein of unknown function, DUF538)

HSP 1 Score: 139.4 bits (350), Expect = 1.900e-33
Identity = 75/155 (48.39%), Postives = 106/155 (68.39%), Query Frame = 1 

		  

Query: 7   ETHREGAEVYSTPDLCKAKSYELLEELDMPNGLLPMNEMIEVGYNRTTGFVWLIQKELVK 66
           E  R  AE+Y+  ++C+ K+   L+E+ MPNGLLP+ ++ EVGY+R +G VWL QK+ + 
Sbjct: 6   EEVRAKAEMYTGDEICREKTKCFLKEISMPNGLLPLKDIEEVGYDRESGVVWLKQKKSIT 65

Query: 67  HHFEKIDRKVTYDTVVTAFVEKHKMKKLHGVKAKEMMIWLPLNEIYIGSDSTKITFGSYT 126
           H F +ID+ V+Y T VTA VE  K+KKL GVKAKE++IW+ +NEIY     TKITF + T
Sbjct: 66  HKFTEIDKLVSYGTEVTAIVETGKIKKLTGVKAKELLIWVTINEIYTEEPPTKITFKTPT 125

Query: 127 GISRSFPVSAFIEEVKKVEEEKKVEEEKKVEEIKA 162
            +SR+FPV+AFI   +  +EE   EE  K +  +A
Sbjct: 126 TLSRTFPVTAFIVPEEPAKEEPAKEEPAKEKSSEA 160
[Close]
BLAST of Spo28324.1 vs. TAIR (Arabidopsis)
Match: AT5G46230.1 (Protein of unknown function, DUF538)

HSP 1 Score: 136.3 bits (342), Expect = 1.600e-32
Identity = 61/132 (46.21%), Postives = 98/132 (74.24%), Query Frame = 1 

		  

Query: 10  REGAEVYSTPDLCKAKSYELLEELDMPNGLLPMNEMIEVGYNRTTGFVWLIQKELVKHHF 69
           REGAE+ +    CK K+ E+L  +++P GLLP++ M E+G+N++TG+VW+  K  V+H F
Sbjct: 11  REGAEICNGESNCKQKAKEILSTMNLPKGLLPLDNMTEIGHNKSTGYVWIKIKNKVQHRF 70

Query: 70  EKIDRKVTYDTVVTAFVEKHKMKKLHGVKAKEMMIWLPLNEIYIG-SDSTKITFGSYTGI 129
           + I R V+YD+ VTA +E  +M +L G+K+KE++IW+ ++EI++   D T+ITF + TG+
Sbjct: 71  KAIGRNVSYDSEVTAILENRRMSQLTGIKSKEILIWVTISEIFVNHQDPTQITFANPTGL 130

Query: 130 SRSFPVSAFIEE 141
           SR+FPV+AF E+
Sbjct: 131 SRTFPVTAFEED 142
[Close]
BLAST of Spo28324.1 vs. TAIR (Arabidopsis)
Match: AT1G56580.1 (Protein of unknown function, DUF538)

HSP 1 Score: 134.8 bits (338), Expect = 4.700e-32
Identity = 73/142 (51.41%), Postives = 100/142 (70.42%), Query Frame = 1 

		  

Query: 10  REGAEVYSTPDLCKAKSYELLEELDMPNGLLPMNEMIEVGYNRTTGFVWLIQKELVKHHF 69
           R  AE Y+  ++C+ K+ E L+E+ MPNGLLP+ ++ EVGY+R TG VWL QK+ + H F
Sbjct: 9   RARAEKYTGDEICREKTKEFLKEVSMPNGLLPLKDIEEVGYDRETGIVWLKQKKSITHKF 68

Query: 70  EKIDRKVTYDTVVTAFVEKHKMKKLHGVKAKEMMIWLPLNEIYI--GSDSTKITFGSYTG 129
           E I + V+Y T V A VE  K+KKL GVKAKE++IW+ LNE+ +   + S KI F + TG
Sbjct: 69  EAIGKLVSYATEVIAQVEVGKIKKLTGVKAKELLIWVTLNELVLEQPTSSGKINFRTPTG 128

Query: 130 ISRSFPVSAF-IEEVKKVEEEK 149
           +SR+FPVSAF + EV+K   EK
Sbjct: 129 LSRTFPVSAFVVPEVEKPATEK 150
[Close]
BLAST of Spo28324.1 vs. TAIR (Arabidopsis)
Match: AT1G30020.1 (Protein of unknown function, DUF538)

HSP 1 Score: 119.4 bits (298), Expect = 2.000e-27
Identity = 53/110 (48.18%), Postives = 78/110 (70.91%), Query Frame = 1 

		  

Query: 4   QLIETHREGAEVYSTPDLCKAKSYELLEELDMPNGLLPMNEMIEVGYNRTTGFVWLIQKE 63
           ++I    +  E YS   LC  K+ ELL  + +P GLLP+ +M EVGYN+T GFVW+  + 
Sbjct: 5   EMIIDESDDIESYSDQSLCLDKAKELLALIKLPTGLLPLKDMTEVGYNKTKGFVWMRMRS 64

Query: 64  LVKHHFEKIDRKVTYDTVVTAFVEKHKMKKLHGVKAKEMMIWLPLNEIYI 114
            ++H F +I R+V YDT +TAFVE  +M++L GVK+KE+MIW+P+N+I+I
Sbjct: 65  KIEHTFREIGRRVLYDTEITAFVEDRRMRRLTGVKSKELMIWVPVNDIFI 114
[Close]
BLAST of Spo28324.1 vs. TAIR (Arabidopsis)
Match: AT4G24130.1 (Protein of unknown function, DUF538)

HSP 1 Score: 116.3 bits (290), Expect = 1.700e-26
Identity = 59/135 (43.70%), Postives = 88/135 (65.19%), Query Frame = 1 

		  

Query: 10  REGAEVYSTPDLCKAKSYELLEELDMPNGLLPMNEMIEVGYNRTTGFVWLIQKELVKHHF 69
           REGAE+    + C  +S ELLEEL  P G++P+  ++E G  R TG+VW+ Q    +H F
Sbjct: 13  REGAEIVYGAEECYKQSLELLEELGFPKGVMPLKNLVECGRVRATGYVWMKQDTPYEHFF 72

Query: 70  EKIDRKVTYDTVVTAFVEKHKMKKLHGVKAKEMMIWLPLNEIYIGS-DSTKITFGSYTGI 129
           E  + +V+Y   VTA+V+K  MKK+ GVK+K+M +W+P+ E+ +    S KI F +  GI
Sbjct: 73  EATNTRVSYGLEVTAYVDKCCMKKMTGVKSKQMFLWVPIVEMSMEEPKSKKIYFKTPMGI 132

Query: 130 SRSFPVSAFIEEVKK 144
            RSFPV+ F++E +K
Sbjct: 133 GRSFPVTGFMDEEEK 147
The following BLAST results are available for this feature:
BLAST of Spo28324.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902182590|gb|KNA09950.1|1.9e-83100.hypothetical protein SOVF_1487... [more]
gi|731326893|ref|XP_010674249.1|3.5e-4565.7PREDICTED: uncharacterized pro... [more]
gi|902189878|gb|KNA11491.1|3.9e-4465.0hypothetical protein SOVF_1347... [more]
gi|255557315|ref|XP_002519688.1|9.8e-4056.6PREDICTED: uncharacterized pro... [more]
gi|224078982|ref|XP_002305706.1|2.2e-3957.3hypothetical protein POPTR_000... [more]
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BLAST of Spo28324.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QRS8_SPIOL1.3e-83100.Uncharacterized protein OS=Spi... [more]
A0A0J8CPD4_BETVU2.4e-4565.7Uncharacterized protein OS=Bet... [more]
A0A0K9QY79_SPIOL2.7e-4465.0Uncharacterized protein OS=Spi... [more]
B9S119_RICCO6.9e-4056.6Putative uncharacterized prote... [more]
B9H2B8_POPTR1.5e-3957.3Uncharacterized protein OS=Pop... [more]
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BLAST of Spo28324.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo28324.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G09310.11.9e-3348.3Protein of unknown function, D... [more]
AT5G46230.11.6e-3246.2Protein of unknown function, D... [more]
AT1G56580.14.7e-3251.4Protein of unknown function, D... [more]
AT1G30020.12.0e-2748.1Protein of unknown function, D... [more]
AT4G24130.11.7e-2643.7Protein of unknown function, D... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007493Protein of unknown function DUF538GENE3D2.30.240.10coord: 5..143
score: 2.9
IPR007493Protein of unknown function DUF538PFAMPF04398DUF538coord: 27..137
score: 5.5
IPR007493Protein of unknown function DUF538unknownSSF141562At5g01610-likecoord: 5..139
score: 1.96
NoneNo IPR availableunknownCoilCoilcoord: 134..161
scor
NoneNo IPR availablePANTHERPTHR31676FAMILY NOT NAMEDcoord: 1..140
score: 4.0
NoneNo IPR availablePANTHERPTHR31676:SF7SUBFAMILY NOT NAMEDcoord: 1..140
score: 4.0

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016311 dephosphorylation
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0010206 photosystem II repair
biological_process GO:0010207 photosystem II assembly
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0019497 hexachlorocyclohexane metabolic process
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0006364 rRNA processing
biological_process GO:0009744 response to sucrose
biological_process GO:0010114 response to red light
biological_process GO:0009644 response to high light intensity
biological_process GO:0010218 response to far red light
biological_process GO:0009637 response to blue light
biological_process GO:0010155 regulation of proton transport
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0010286 heat acclimation
biological_process GO:0055085 transmembrane transport
biological_process GO:0045017 glycerolipid biosynthetic process
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0042742 defense response to bacterium
biological_process GO:0050832 defense response to fungus
biological_process GO:0031640 killing of cells of other organism
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0007017 microtubule-based process
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0030154 cell differentiation
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0009657 plastid organization
biological_process GO:0006771 riboflavin metabolic process
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0009658 chloroplast organization
biological_process GO:0045892 negative regulation of transcription, DNA-templated
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0048444 floral organ morphogenesis
biological_process GO:0042538 hyperosmotic salinity response
biological_process GO:0009939 positive regulation of gibberellic acid mediated signaling pathway
biological_process GO:1901575 organic substance catabolic process
biological_process GO:0010325 raffinose family oligosaccharide biosynthetic process
biological_process GO:0009737 response to abscisic acid
biological_process GO:0009723 response to ethylene
biological_process GO:0009863 salicylic acid mediated signaling pathway
biological_process GO:0010162 seed dormancy process
biological_process GO:0009845 seed germination
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:1901576 organic substance biosynthetic process
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0033468 CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
biological_process GO:0009103 lipopolysaccharide biosynthetic process
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0009860 pollen tube growth
biological_process GO:0006123 mitochondrial electron transport, cytochrome c to oxygen
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0042430 indole-containing compound metabolic process
biological_process GO:0009058 biosynthetic process
biological_process GO:0019752 carboxylic acid metabolic process
biological_process GO:0009056 catabolic process
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0044249 cellular biosynthetic process
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0015693 magnesium ion transport
biological_process GO:0006979 response to oxidative stress
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0006560 proline metabolic process
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0006621 protein retention in ER lumen
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0006479 protein methylation
biological_process GO:0009853 photorespiration
biological_process GO:0006164 purine nucleotide biosynthetic process
biological_process GO:0048481 plant ovule development
biological_process GO:0009555 pollen development
biological_process GO:0006591 ornithine metabolic process
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0006526 arginine biosynthetic process
biological_process GO:0015979 photosynthesis
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0050896 response to stimulus
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0046500 S-adenosylmethionine metabolic process
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process GO:0044262 cellular carbohydrate metabolic process
biological_process GO:0009987 cellular process
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0006606 protein import into nucleus
biological_process GO:0007033 vacuole organization
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0000902 cell morphogenesis
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0007030 Golgi organization
biological_process GO:0016049 cell growth
cellular_component GO:0045277 respiratory chain complex IV
cellular_component GO:0070469 respiratory chain
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009507 chloroplast
cellular_component GO:0009579 thylakoid
cellular_component GO:0031307 integral component of mitochondrial outer membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0046862 chromoplast membrane
cellular_component GO:0005746 mitochondrial respiratory chain
cellular_component GO:0010287 plastoglobule
cellular_component GO:0005737 cytoplasm
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0044434 chloroplast part
cellular_component GO:0005856 cytoskeleton
cellular_component GO:0000502 proteasome complex
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0005618 cell wall
cellular_component GO:0005576 extracellular region
cellular_component GO:0005875 microtubule associated complex
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0009348 ornithine carbamoyltransferase complex
cellular_component GO:0005634 nucleus
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0009523 photosystem II
cellular_component GO:0019005 SCF ubiquitin ligase complex
cellular_component GO:0044425 membrane part
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0031977 thylakoid lumen
cellular_component GO:0005840 ribosome
molecular_function GO:0030234 enzyme regulator activity
molecular_function GO:0009916 alternative oxidase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0003779 actin binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0046923 ER retention sequence binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
molecular_function GO:0051087 chaperone binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0015095 magnesium ion transmembrane transporter activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0004535 poly(A)-specific ribonuclease activity
molecular_function GO:0004144 diacylglycerol O-acyltransferase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0004585 ornithine carbamoyltransferase activity
molecular_function GO:0016597 amino acid binding
molecular_function GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
molecular_function GO:0016746 transferase activity, transferring acyl groups
molecular_function GO:0008233 peptidase activity
molecular_function GO:0003993 acid phosphatase activity
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0008690 3-deoxy-manno-octulosonate cytidylyltransferase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004129 cytochrome-c oxidase activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0005198 structural molecule activity
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0005543 phospholipid binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo029320.77Barchart | Table
Spo212150.76Barchart | Table
Spo050730.75Barchart | Table
Spo162130.74Barchart | Table
Spo102350.73Barchart | Table
Spo093350.73Barchart | Table
Spo240460.72Barchart | Table
Spo280580.72Barchart | Table
Spo035720.72Barchart | Table
Spo146780.72Barchart | Table
Spo046530.72Barchart | Table
Spo156390.72Barchart | Table
Spo089350.71Barchart | Table
Spo181950.71Barchart | Table
Spo272480.71Barchart | Table
Spo251590.71Barchart | Table
Spo238000.71Barchart | Table
Spo201520.71Barchart | Table
Spo134900.71Barchart | Table
Spo087890.70Barchart | Table
Spo115680.70Barchart | Table
Spo062930.70Barchart | Table
Spo043830.70Barchart | Table
Spo108640.69Barchart | Table
Spo109500.69Barchart | Table
Spo213830.69Barchart | Table
Spo208690.69Barchart | Table
Spo119610.69Barchart | Table
Spo146670.69Barchart | Table
Spo012610.69Barchart | Table
Spo228110.69Barchart | Table
Spo095540.69Barchart | Table
Spo086540.69Barchart | Table
Spo103730.69Barchart | Table
Spo178600.68Barchart | Table
Spo006670.68Barchart | Table
Spo060040.68Barchart | Table
Spo123020.68Barchart | Table
Spo240700.68Barchart | Table
Spo180800.67Barchart | Table
Spo181710.67Barchart | Table
Spo160790.67Barchart | Table
Spo185020.67Barchart | Table
Spo133930.67Barchart | Table
Spo113170.67Barchart | Table
Spo092020.67Barchart | Table
Spo054960.67Barchart | Table
Spo051030.67Barchart | Table
Spo281860.67Barchart | Table
Spo270810.67Barchart | Table
Spo017270.67Barchart | Table
Spo211550.66Barchart | Table
Spo248570.66Barchart | Table
Spo025730.66Barchart | Table
Spo253470.66Barchart | Table
Spo248080.66Barchart | Table
Spo002250.66Barchart | Table
Spo264300.65Barchart | Table
Spo197380.65Barchart | Table
Spo154610.65Barchart | Table
Spo136140.65Barchart | Table
Spo017140.65Barchart | Table