Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCAATCACTCTTCTTGTGTTTCTTTCTCCTCTTCCTACACTCAACGCCGTTGTTCTCGACACCGACGGTGAGGATGTACGTAACAGCGGCGGATCCTATTACATCATCCCAAAAGGAAGTAGTAACGGCCTCACTCTTACCCAGAGACCCGGGAGCCCATCATGCCCACTCTATATAACCCAGATAACCACCTCTCCGGGTACATCTGTAACCATCTCTGCTCTTGTGAGAACACTTTTCATTCCAGTTTCCGCTAGAGTTAACATCGTGTTCAACACTGACGTTGCCACGTGCGCGGACCCGCTTGAGTGGCACGTGACCCCTGATTTGGCTACCGGGAAGTCTTATGTGACTGCTGGTGGTGGTTCGACGGTTTCCAGTTATAGATTCAGCATTGAGCAGGCTGGCAATGGTGAAAAGGACAATATTTATAAGATAAGGTACTGTCCGTCTGCTGAGGAAGATGAAACAAATTGTGGTGACGTGGGTTTTCTCGGGGAGAATGGATTATTGGGTATCAATAATGAGAATCCACTTTTCGTTCAGTTTAAGAAAGTTAATACTGGAATGTCTGAGATAGTGTAATAATCTTCTCATTTACTGCTGCTTTTTCTTGGAATTATGTCGTCAATAATAATGGATTAATGGGTATAAACTATGAATGTATAATGCCTGTAAGTTTATTACAATAAGGAGAACTCTCTGTCTCGTGTTAAA GCAATCACTCTTCTTGTGTTTCTTTCTCCTCTTCCTACACTCAACGCCGTTGTTCTCGACACCGACGGTGAGGATGTACGTAACAGCGGCGGATCCTATTACATCATCCCAAAAGGAAGTAGTAACGGCCTCACTCTTACCCAGAGACCCGGGAGCCCATCATGCCCACTCTATATAACCCAGATAACCACCTCTCCGGGTACATCTGTAACCATCTCTGCTCTTGTGAGAACACTTTTCATTCCAGTTTCCGCTAGAGTTAACATCGTGTTCAACACTGACGTTGCCACGTGCGCGGACCCGCTTGAGTGGCACGTGACCCCTGATTTGGCTACCGGGAAGTCTTATGTGACTGCTGGTGGTGGTTCGACGGTTTCCAGTTATAGATTCAGCATTGAGCAGGCTGGCAATGGTGAAAAGGACAATATTTATAAGATAAGGTACTGTCCGTCTGCTGAGGAAGATGAAACAAATTGTGGTGACGTGGGTTTTCTCGGGGAGAATGGATTATTGGGTATCAATAATGAGAATCCACTTTTCGTTCAGTTTAAGAAAGTTAATACTGGAATGTCTGAGATAGTGTAATAATCTTCTCATTTACTGCTGCTTTTTCTTGGAATTATGTCGTCAATAATAATGGATTAATGGGTATAAACTATGAATGTATAATGCCTGTAAGTTTATTACAATAAGGAGAACTCTCTGTCTCGTGTTAAA GCAATCACTCTTCTTGTGTTTCTTTCTCCTCTTCCTACACTCAACGCCGTTGTTCTCGACACCGACGGTGAGGATGTACGTAACAGCGGCGGATCCTATTACATCATCCCAAAAGGAAGTAGTAACGGCCTCACTCTTACCCAGAGACCCGGGAGCCCATCATGCCCACTCTATATAACCCAGATAACCACCTCTCCGGGTACATCTGTAACCATCTCTGCTCTTGTGAGAACACTTTTCATTCCAGTTTCCGCTAGAGTTAACATCGTGTTCAACACTGACGTTGCCACGTGCGCGGACCCGCTTGAGTGGCACGTGACCCCTGATTTGGCTACCGGGAAGTCTTATGTGACTGCTGGTGGTGGTTCGACGGTTTCCAGTTATAGATTCAGCATTGAGCAGGCTGGCAATGGTGAAAAGGACAATATTTATAAGATAAGGTACTGTCCGTCTGCTGAGGAAGATGAAACAAATTGTGGTGACGTGGGTTTTCTCGGGGAGAATGGATTATTGGGTATCAATAATGAGAATCCACTTTTCGTTCAGTTTAAGAAAGTTAATACTGGAATGTCTGAGATAGTGTAA AITLLVFLSPLPTLNAVVLDTDGEDVRNSGGSYYIIPKGSSNGLTLTQRPGSPSCPLYITQITTSPGTSVTISALVRTLFIPVSARVNIVFNTDVATCADPLEWHVTPDLATGKSYVTAGGGSTVSSYRFSIEQAGNGEKDNIYKIRYCPSAEEDETNCGDVGFLGENGLLGINNENPLFVQFKKVNTGMSEIV Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo28474.1 vs. NCBI nr
Match: gi|902204418|gb|KNA14861.1| (hypothetical protein SOVF_103530 [Spinacia oleracea]) HSP 1 Score: 387.1 bits (993), Expect = 1.800e-104 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1
BLAST of Spo28474.1 vs. NCBI nr
Match: gi|902232970|gb|KNA22881.1| (hypothetical protein SOVF_029890 [Spinacia oleracea]) HSP 1 Score: 271.9 bits (694), Expect = 8.400e-70 Identity = 138/194 (71.13%), Postives = 156/194 (80.41%), Query Frame = 1
BLAST of Spo28474.1 vs. NCBI nr
Match: gi|731344392|ref|XP_010683391.1| (PREDICTED: trypsin inhibitor 2-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 189.9 bits (481), Expect = 4.200e-45 Identity = 107/194 (55.15%), Postives = 132/194 (68.04%), Query Frame = 1
BLAST of Spo28474.1 vs. NCBI nr
Match: gi|731364459|ref|XP_010693983.1| (PREDICTED: factor Xa inhibitor BuXI-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 127.1 bits (318), Expect = 3.300e-26 Identity = 85/189 (44.97%), Postives = 108/189 (57.14%), Query Frame = 1
BLAST of Spo28474.1 vs. NCBI nr
Match: gi|731364403|ref|XP_010693954.1| (PREDICTED: trypsin inhibitor 1B-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 126.7 bits (317), Expect = 4.400e-26 Identity = 80/194 (41.24%), Postives = 108/194 (55.67%), Query Frame = 1
BLAST of Spo28474.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R5S6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_103530 PE=4 SV=1) HSP 1 Score: 387.1 bits (993), Expect = 1.300e-104 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1
BLAST of Spo28474.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RTK4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_029890 PE=4 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 5.900e-70 Identity = 138/194 (71.13%), Postives = 156/194 (80.41%), Query Frame = 1
BLAST of Spo28474.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BFA5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g069460 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 2.300e-26 Identity = 85/189 (44.97%), Postives = 108/189 (57.14%), Query Frame = 1
BLAST of Spo28474.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E666_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g069440 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 3.000e-26 Identity = 80/194 (41.24%), Postives = 108/194 (55.67%), Query Frame = 1
BLAST of Spo28474.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E675_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g069530 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 7.500e-25 Identity = 83/191 (43.46%), Postives = 110/191 (57.59%), Query Frame = 1
BLAST of Spo28474.1 vs. ExPASy Swiss-Prot
Match: ITRY_PHAVA (Trypsin inhibitor BvTI OS=Phanera variegata PE=1 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 8.000e-20 Identity = 75/178 (42.13%), Postives = 98/178 (55.06%), Query Frame = 1
BLAST of Spo28474.1 vs. ExPASy Swiss-Prot
Match: IT1B_PSOTE (Trypsin inhibitor 1B OS=Psophocarpus tetragonolobus PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 5.700e-10 Identity = 57/177 (32.20%), Postives = 87/177 (49.15%), Query Frame = 1
BLAST of Spo28474.1 vs. ExPASy Swiss-Prot
Match: IT1A_PSOTE (Trypsin inhibitor 1A OS=Psophocarpus tetragonolobus PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 9.800e-10 Identity = 58/177 (32.77%), Postives = 89/177 (50.28%), Query Frame = 1
BLAST of Spo28474.1 vs. ExPASy Swiss-Prot
Match: ITRY_LEULE (Trypsin inhibitor OS=Leucaena leucocephala PE=1 SV=2) HSP 1 Score: 52.0 bits (123), Expect = 8.600e-6 Identity = 59/190 (31.05%), Postives = 84/190 (44.21%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo28474.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo28474.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo28474.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 4
BLAST of Spo28474.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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