Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCCTCTCTATCCCCAAACACTCCCTTGTTTCCACTCTCCCAACCCAAACCCCAAAACCCATTTCTTCTCAAAGCCTCTGCATCATCTCCAATTCAACACAATCCCAATTTTGCGGACTGAAATTGTCAAACCCATCTTCTCTCTCCTCCCCATTCCCTTCCCGTTCTTCCAAATTCTCCATTGTTTCTAAGGTGCTGCATTTTGCTAGAATTGTGTAATTTTGGGATTTTCTGATTTTTTTTTCAGTGAATATTTCTTTTTCTGGGTTTTTAATTTTTGTGAATTATTTGTTGAAAATGCAGGTTAAAGAAGGTACTTTGGCACCTGCATTTAGTTTGAAGGATCAAGATGGGAGGAATGTGAGCTTGTCTAAGTTTAAAGGGAAGCCTGTTGTTGTTTACTTTTACCCAGCTGATGAAACCCCTGGTTGCACCAAACAGGTCCTTACCTTAATTTCTCCCTTTTCACCTGTTGTTCTAATTATGAATTTTGATTCTAATGCCTCTTTTTTGAAAGAATTATATCCTTTAAGTATTTACTATTCTTGTTAAGAACCTTTGTAAACCCTTAAAGAACACATATTATAGGGATCATGATTGATATATAATGCTACTAAACAGTGATCATGTTAAGGTAAGTGGAACAATGTATATTTATAAAACTGTTGTGCGTGGGAATGAGCCACAAGGGCAATATAAGTTACAAATGTGGTGGTGGGGGGAAATTTAACCTGATGCCTAATGTACACAAACCCTCAGTCTTAACCACTAGGCCAAGACCTCAGTCTTAACCATTAGTCTTGGGATGGGTTTGGGATGAGCTATTATATGTCAATCAAATGACCAATGGAGACTTGATCAACCTCGGGTATTTTAATGCCATGATTTTATAATATGATATTCAGGAGTGCTAAACTTCATTTTGTATGTCAATAATATTGAAAAGTTGATCAACCTAACTATGGCTTACAGTATAGTCACATTGTATAGTAGCTACCATACAGTATAGTCACATTGTATAGTAGCTACCACATGGTGATAAACGACCTCGAATTAAATTACATTGGTGGAGGAAGAATAAACAATGCCCTTTCCTTTTGAAGCTGTCAGCAGTCTCAGCACTCATCATTTTCAAGCAGTTGCTTAGATTAATTTGTTCTAACATTATGTTTATCAGAGGATTATCAATTGTTCAGCAAATCTCTTGATGGATTGTTGATGAGGTATGCTATGCTGATTAGGGTGATCAACAATTTAGAAATGATTTTAGACATTTAGTTAGGTTACATTGTATGTATAGGATATGCAATGAACATGGAATATTTGATAGTGAAGGAATCAAGGAGTAAAAGCTCAGCATTTATCTGGACATCCTAAAGGAGAGAGTCCTTGGCCAACAACAATCCTCTGGCAAATCAAATGCGCTTCCAAAATTGAAAATTTTCTATGTTCTTGATATTAGGAATCCTTGACGTATTCAATTGTTTGCAAAGCAAAAGATAAATATCACTACCTGTTTCCTGTTTCCAGTTTTTGTTTGTTTGGTTTTAAAAGTCATATGAACTAGATTGAATCATGAGCTAAAAAATAGTCATACTTATAGTAAATTAGTAATTATGTTGATTTCGAAAACTGGCAACAAAAAACTGGAAACTACTTTATGTGGTTTTCATATTTTGTAAAAAACAGAAAACTAAAAACAAAAAACGATACCGAACGGCCGAACGGGGCCTTAAGCTGCCAAATTCATATATCGTTTTTTCTTTTCACTGGAAATTACAAGTAACTAGGGGTAGTGGTGAAACCAAGCCAGTATCAAATAATGCATTGTTATTGAGGACCGAATGTTATACTAGTGTACTGTTTTCTATTTCTAAGTATTTTTCTTACTTGACATTCATGTAAAGCTCCCGTGGAAGATTGCTTTCTTTGGGATATATGGAATCCTCTGCCTATGCAGCTATACTGTGCAGAAGGGTTGAGGCTTCTGCTTCTCTTTCCTGTAAGAAGTAAAAACCAACTGAATAGCCAATAAAAGACATTGCACCTCCAACGTATGTGACATTCTCCTATTAATTGGTTTGCCATTGTGCTAATAAAACAGCTTTGAAGATGGCAAAATGTTCTCTTGAGTCTTGACTCTTGAATATTTGTTTTTTGGTCTTTGCAACAATGTATTTACCATGTCACTCTTACTGTCATGGAACTGGTTCGCGACTTACTTCTTACCTTATGACTTGACTTTCTTCATTTTCACCACAGGCTTGTGCTTTTAGAGACTCGTATGAAAAGTTTAAGAAAGCAGGAGCAGAGGTTATCGGTATCAGTGGCGATGATTCATCATCTCACAAGGTAAATACAAAATTCTAGAGTTGTCCATACTTGCTCAGCAAATATTTACATTCAATTAAAAAACATCATTGTCTGTGTTATTGGCATGGAGAAAAAGTCCTTCAACTCATGCAGTATTACAACAACAATTTCGTATTTTTTAAGTCACCTAAGAAAGGGAAATTATGGTGTTTGTAATCTAGTGTGGAGTTGTTGAATGGTGGCATTCAAGATGTGGGATAAAATCATGTCTCCAAAGTTGCATCACTGCACTTTATCGAACCAAAAAAGAGAAGAAAAAAAGAACACTGGAAATTCTGATGTTGTGTACTTGTGTTCTTCCCCTGGAGTATAGCTTATTCGTTGTTGTATAATGAAATTGTTTTGTGTTATGCCTTGAGAAATTCCAGTCTACTTTTAGTTGACTTTCTTGTCTATCATGAAATTGTTTTGTGTTATCCAAAACTACTAGCTTCATAAATCAACTAGGTATTAACGAAGCAAAACTTGTTGCACTTCTTGAATTGTCTCTATGAATCTCTAAAACATACTACCTCCGTTTCAAAATGATTCTTACACTTTTTGGTTTAGTCGGTTTCATAATGTTCTTTACCCTTTGCTTTATTCTATTTTTGAACATGAAAATTTACTATCTTACCCCACTTATCCCACAACATTTTCAACTTTCCACTCATTTTCTCTTACTTCATTCCTTTTTTTTCTTACACGCGCCTACCTTTTACCTATCTACCATACTTTATCCATATTTTATTATATCCGCTCACCTTTTTACATATTTTCCTTTGAATGTATACAGGCATTCAAACAGAAGTACAAACTTCCTTACACTTTACTAAGTGACGAGGGTAACAACGTGAGAAAAGAGTGGGGAGTCCCTTCGGATCTCTTTGGAGCTCTCCCCGGGAGACAAACCTACGTCCTTGACAAGAATGGAGTTGTCCGGCTCGTTTATAACAATCAATTTCAACCCGAGAAGCATATTGACGAAACCCTCAAGTTTCTACAAAGCCTTTGA ATGGCTTCCCTCTCTATCCCCAAACACTCCCTTGTTTCCACTCTCCCAACCCAAACCCCAAAACCCATTTCTTCTCAAAGCCTCTGCATCATCTCCAATTCAACACAATCCCAATTTTGCGGACTGAAATTGTCAAACCCATCTTCTCTCTCCTCCCCATTCCCTTCCCGTTCTTCCAAATTCTCCATTGTTTCTAAGGTTAAAGAAGGTACTTTGGCACCTGCATTTAGTTTGAAGGATCAAGATGGGAGGAATGTGAGCTTGTCTAAGTTTAAAGGGAAGCCTGTTGTTGTTTACTTTTACCCAGCTGATGAAACCCCTGGTTGCACCAAACAGGCTTGTGCTTTTAGAGACTCGTATGAAAAGTTTAAGAAAGCAGGAGCAGAGGTTATCGGTATCAGTGGCGATGATTCATCATCTCACAAGGCATTCAAACAGAAGTACAAACTTCCTTACACTTTACTAAGTGACGAGGGTAACAACGTGAGAAAAGAGTGGGGAGTCCCTTCGGATCTCTTTGGAGCTCTCCCCGGGAGACAAACCTACGTCCTTGACAAGAATGGAGTTGTCCGGCTCGTTTATAACAATCAATTTCAACCCGAGAAGCATATTGACGAAACCCTCAAGTTTCTACAAAGCCTTTGA ATGGCTTCCCTCTCTATCCCCAAACACTCCCTTGTTTCCACTCTCCCAACCCAAACCCCAAAACCCATTTCTTCTCAAAGCCTCTGCATCATCTCCAATTCAACACAATCCCAATTTTGCGGACTGAAATTGTCAAACCCATCTTCTCTCTCCTCCCCATTCCCTTCCCGTTCTTCCAAATTCTCCATTGTTTCTAAGGTTAAAGAAGGTACTTTGGCACCTGCATTTAGTTTGAAGGATCAAGATGGGAGGAATGTGAGCTTGTCTAAGTTTAAAGGGAAGCCTGTTGTTGTTTACTTTTACCCAGCTGATGAAACCCCTGGTTGCACCAAACAGGCTTGTGCTTTTAGAGACTCGTATGAAAAGTTTAAGAAAGCAGGAGCAGAGGTTATCGGTATCAGTGGCGATGATTCATCATCTCACAAGGCATTCAAACAGAAGTACAAACTTCCTTACACTTTACTAAGTGACGAGGGTAACAACGTGAGAAAAGAGTGGGGAGTCCCTTCGGATCTCTTTGGAGCTCTCCCCGGGAGACAAACCTACGTCCTTGACAAGAATGGAGTTGTCCGGCTCGTTTATAACAATCAATTTCAACCCGAGAAGCATATTGACGAAACCCTCAAGTTTCTACAAAGCCTTTGA MASLSIPKHSLVSTLPTQTPKPISSQSLCIISNSTQSQFCGLKLSNPSSLSSPFPSRSSKFSIVSKVKEGTLAPAFSLKDQDGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFKQKYKLPYTLLSDEGNNVRKEWGVPSDLFGALPGRQTYVLDKNGVVRLVYNNQFQPEKHIDETLKFLQSL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo30004.1 vs. NCBI nr
Match: gi|902164669|gb|KNA06994.1| (hypothetical protein SOVF_175970 [Spinacia oleracea]) HSP 1 Score: 428.3 bits (1100), Expect = 7.700e-117 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 1
BLAST of Spo30004.1 vs. NCBI nr
Match: gi|75324751|sp|Q6UBI3.1|PERQ_SUASA (RecName: Full=Peroxiredoxin Q, chloroplastic; AltName: Full=Thioredoxin reductase; Flags: Precursor) HSP 1 Score: 365.2 bits (936), Expect = 8.100e-98 Identity = 181/214 (84.58%), Postives = 194/214 (90.65%), Query Frame = 1
BLAST of Spo30004.1 vs. NCBI nr
Match: gi|731352451|ref|XP_010687556.1| (PREDICTED: peroxiredoxin Q, chloroplastic [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 362.8 bits (930), Expect = 4.000e-97 Identity = 180/214 (84.11%), Postives = 199/214 (92.99%), Query Frame = 1
BLAST of Spo30004.1 vs. NCBI nr
Match: gi|215254425|gb|ACJ64204.1| (peroxiredoxin Q [Salicornia herbacea]) HSP 1 Score: 356.7 bits (914), Expect = 2.900e-95 Identity = 179/214 (83.64%), Postives = 191/214 (89.25%), Query Frame = 1
BLAST of Spo30004.1 vs. NCBI nr
Match: gi|373839258|gb|AEY76087.1| (peroxiredoxin Q [Haloxylon ammodendron]) HSP 1 Score: 340.5 bits (872), Expect = 2.100e-90 Identity = 171/218 (78.44%), Postives = 190/218 (87.16%), Query Frame = 1
BLAST of Spo30004.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QIC3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_175970 PE=4 SV=1) HSP 1 Score: 428.3 bits (1100), Expect = 5.400e-117 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 1
BLAST of Spo30004.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BTY6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g190860 PE=4 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 2.800e-97 Identity = 180/214 (84.11%), Postives = 199/214 (92.99%), Query Frame = 1
BLAST of Spo30004.1 vs. UniProtKB/TrEMBL
Match: B7U796_9CARY (Peroxiredoxin Q OS=Salicornia herbacea GN=PrxQ PE=2 SV=1) HSP 1 Score: 356.7 bits (914), Expect = 2.000e-95 Identity = 179/214 (83.64%), Postives = 191/214 (89.25%), Query Frame = 1
BLAST of Spo30004.1 vs. UniProtKB/TrEMBL
Match: H2DZH6_9CARY (Peroxiredoxin Q OS=Haloxylon ammodendron GN=PrXQ PE=2 SV=1) HSP 1 Score: 340.5 bits (872), Expect = 1.500e-90 Identity = 171/218 (78.44%), Postives = 190/218 (87.16%), Query Frame = 1
BLAST of Spo30004.1 vs. UniProtKB/TrEMBL
Match: M5WAD1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011269mg PE=4 SV=1) HSP 1 Score: 334.7 bits (857), Expect = 8.100e-89 Identity = 170/216 (78.70%), Postives = 187/216 (86.57%), Query Frame = 1
BLAST of Spo30004.1 vs. ExPASy Swiss-Prot
Match: PERQ_SUASA (Peroxiredoxin Q, chloroplastic OS=Suaeda salsa GN=PRXQ PE=1 SV=1) HSP 1 Score: 365.2 bits (936), Expect = 5.000e-100 Identity = 181/214 (84.58%), Postives = 194/214 (90.65%), Query Frame = 1
BLAST of Spo30004.1 vs. ExPASy Swiss-Prot
Match: PRXQ_GENTR (Peroxiredoxin Q, chloroplastic OS=Gentiana triflora GN=AFP1 PE=1 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 2.600e-88 Identity = 162/217 (74.65%), Postives = 188/217 (86.64%), Query Frame = 1
BLAST of Spo30004.1 vs. ExPASy Swiss-Prot
Match: PRXQ_POPJC (Peroxiredoxin Q, chloroplastic OS=Populus jackii GN=PRXQ PE=1 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 9.900e-88 Identity = 162/214 (75.70%), Postives = 184/214 (85.98%), Query Frame = 1
BLAST of Spo30004.1 vs. ExPASy Swiss-Prot
Match: PERQ_SEDLI (Peroxiredoxin Q, chloroplastic (Fragment) OS=Sedum lineare GN=PRXQ PE=1 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 1.900e-78 Identity = 147/185 (79.46%), Postives = 160/185 (86.49%), Query Frame = 1
BLAST of Spo30004.1 vs. ExPASy Swiss-Prot
Match: PRXQ_ARATH (Peroxiredoxin Q, chloroplastic OS=Arabidopsis thaliana GN=PRXQ PE=1 SV=1) HSP 1 Score: 287.0 bits (733), Expect = 1.700e-76 Identity = 145/212 (68.40%), Postives = 171/212 (80.66%), Query Frame = 1
BLAST of Spo30004.1 vs. TAIR (Arabidopsis)
Match: AT3G26060.2 (Thioredoxin superfamily protein) HSP 1 Score: 282.3 bits (721), Expect = 2.400e-76 Identity = 145/213 (68.08%), Postives = 171/213 (80.28%), Query Frame = 1
BLAST of Spo30004.1 vs. TAIR (Arabidopsis)
Match: AT5G06290.1 (2-cysteine peroxiredoxin B) HSP 1 Score: 83.2 bits (204), Expect = 2.200e-16 Identity = 66/201 (32.84%), Postives = 105/201 (52.24%), Query Frame = 1
BLAST of Spo30004.1 vs. TAIR (Arabidopsis)
Match: AT3G11630.1 (Thioredoxin superfamily protein) HSP 1 Score: 81.3 bits (199), Expect = 8.200e-16 Identity = 65/196 (33.16%), Postives = 100/196 (51.02%), Query Frame = 1
BLAST of Spo30004.1 vs. TAIR (Arabidopsis)
Match: AT1G48130.1 (1-cysteine peroxiredoxin 1) HSP 1 Score: 56.2 bits (134), Expect = 2.800e-8 Identity = 33/131 (25.19%), Postives = 61/131 (46.56%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo30004.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo30004.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo30004.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo30004.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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