Spo00002.1 (mRNA) | SpinachBase

Overview


Name	Spo00002.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	(GTP-binding nuclear protein Ran-3) (Ras-like GTP-binding protein 3G-1)
Location	SpoScf_01999 : 51692 .. 55195 (-)
Sequence length	1230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAATATCCCAATTACCAGTAGCCCAAATCCTAAACTCCAAAGCCCAAAGCCCAACATTCAAAAAATTAATAAAGTAATTAATATTATTCATCCATATATAAATGACCAAAATAGAAACGATACTATGCCGCGTTTGGAGAACGCGGGATACAATCTAATTTAATTATGTGCGTAAATTGAAAGCCAACTCCACCATCCTATAAATACTCGTTTCCAACCTGCCTTCATTTCTCTCTCCATCTCACCCTCTCTCACATCAATTCCGCCGAATTCAATGGTTCAATTTTCTCTCTCTTCTTCTTATTTTCCCGCACAAATTAGGGTTTAATAATCCCGATGTCTCTGTTGCTTAATTGTTACATTTCTTTTTTTCAGGCTTTACCTAATCAGCAAACTGTTGATTATCCTAGTTTCAAGCTTGTCATCGTCGGCGATGGTGGCACTGGTATATACAATTTTGCTTACACTCTAATTCGTATTTTCGTTCATCTTTTAATTTCGATTATTATATTTTTTTTTCCGATTGATTTTGTTCTTTGGATACGTAAAAGTTTGATGACAATATTACTGCGCGAATTACTTAATTTTGACGATCTTTATGAAAAGAATGTTGAATTTTATGTCCATGTCTTTATTTTTTGGTCTATACATAAGATTTTGATGTGATGATGTCTAGAGTTTGGTATAATTGTTTAGACAATTTCTAATACAAGTGAACTCGAAATTGAAAGTATGATTTACGTGTTTCCGTGGAGGCGGTCCATGTAGTGTCTTGATTTTGTTAATTCGATTAAAAATTTCTTTTGAATTATGTTATAGTATGTGAATGTGTAACATGAGAATTGATACGTGAATAAATATTCGATTGTTAATTAGGGAGAAATTATACCAATAGTATTTTGACTATGTTTATTCAATAAAAAAATGCCCCCGAATAATATGTGGATTAGGGTAGCTAGTGATATTGAAGTGTGCAAATACATTCTTATAAGAAGAAGAGAAACATGAGAATTGATACGTAAAGAAATATCCGATTCTTGAAAATTCGAGCTAAATTTTGAAGAAAAAAGGATTGTTTGCTGCCAGATGATATTTGAAGTGTACACAACTACACACATTCTGATACTTCGTATAAAAGAGAAACATGAGAATTACTTGTTGAAAATTTGAGTTAAACACCGAAGAAAAAACATGGTTTGAGCACTTTTTGCCAAGATACTATGCTCTCGCTGGTCCTTTAATGTGGTTAATTATTTCTTATTTTGACAAAGACAAAGTACGATTTGCTCTCCTATTGGTTTGGAGAGCAATTCATTTTACCACGTTTCTTGTGTCATGTCTTTTCAAAAAGAAAAAAACATTGAGGTTATGGTTTCATGATTGGTGGGCCATTGATGTTTAAACTATCTTTCTTTTAACAGAATTGGAATTAGTGTGTCTGGTGTCTTGTCTATGCAACAATAATGTATAAGTGGATTTTATGTAGCAATTGTGTTTAAAGAGTGAAGCGTACGATAGACTGCGTTTCCCTGATTACTTAAATACTTGGGTTGTTTTGCGTCTTCGTAAGAAAAATAATTGTATATCATCTAAAATTTTGAATGTTGCCGCAGGAAAAACTACTTTTGTTAAGAGGCATCGTACCGGGGAGTTTGAAAAGAGATATGAACGTAAGTCTCCCGACAGCTTCTCTGTTGATATTGCCACCCTTTAATCTTCAAGGATTCAAATGTTATAGAATTAACATTAATCTTGATCTCCCTTTATCCAGCAACTATTGGTGTAGAGGTTCACCCATTGGACTTCACCACAAACTGTGGGAAAATAAGATATTACTGCTGGGATACTGCCGGACAGGAGAAATTTGGAGGTCTTAGAGATGGTTACTAGTAAGTACAACTTGAAAGCAATACAACTATTAAATTTTTACTTTTTGCCTGAATTGGTACTTGTCTGATGTTGCTACTGATTGGATTGGTGGCTTTACTATTTTACCGTGTATGGCTATTGACTACTCCGTAGTTGGTGTTCTTTGGTCGATCACATTGTAGTGCTCCTTGTCTGACCGCTACTCTGCTCAATTTTATTGCACTGATGCTAATGTATGCGTTCATCCTCTTAGTGTTTGCAGTTCATGTGGTAGTCCTCTTTTTCTGCTTCTCTAGCTTTTCATTGGGAGTTTGGGGGATTAGAGGTTTAAGATTTTTCCTTAAATGATTTTTATCTTGATTCTTGAGAAGTCATGAGTCTTTTCTTTACATCTTTTTGAAAGAAACTATTTCTGTTGTGTTGTTTTCTTTCTTTTTTTTGACCGTATGTTTCATTATTTCTTGTCTAGTTTTGTGTATTTCCTTGGTGTTATATCTTGCCTATGTGACATTCTGTTTGCTTGATTATCTAAACCAAACTGCTTCCCTCAATCTATGAGCTTAGTCATCTTTGTTTTTCTAACTGCGCATGTTGATGCAGTATCCACGGACAGTGTGCTATCATTATGTTTGATGTTACAGCCCGACTGACATACAAGAATGTTCCAACTTGGCATCGTGATCTTTGCAGGTTAGTCTCTCTTACTCTGACATCATTTTGGTCAATGCGTGTAGGTTTATTAATTTGAATTTTGTATCTGAACAGGGTCTGTGAAAATATCCCCATTGTTCTCTGTGGGAACAAAGTTGATGTGAAGAACAGGCAAGTGAAGGCAAAGCAGGTTACATTTCACAGGAAGAAGAATCTGCAATACTATGAGATATCTGCAAAGAGCAACTACAACTATGAGAAGCCTTTCTTGTACCTTGCCAGGAAACTTGCTGGGTAATTTTTGTGCCCATTTTTCACTTTCTGCTGCAGTTTGCGGGAATTAAATATTTTATAAAAAAAAACTTGTGTTTCTTATGTTATCTCTGGTTCAATTTTGGTTGTTTTAGGGATGGTAATCTGTACTTTACAGAGGAGGTTGCCCTTATTCCGCCTGAAGTACAAATTGACCTGGCTGCGCAACAAATGTAAGTGTTGAATTGATTTAGATTATTCATGATGTTTTTCAGCTGTGTTAAGGGATTGTTTTTAAGTGTCTGAAGGACATGTAATGTAATTTTATCCAGAAGTCTAATCAGTAGCATTGGTTTCTCGTGTTTTAAACAGGCATGAAGCAGAACTTGCCCAAGCAGCTGCGCAGCCATTGCCAGATGATGATGATGATGCATTTGAGGCTTAATTAGTGGGGCAGGCTCTCAGGATCACTCTTTAGTAGTTTTGACCTTTAGGGGATGCACCTTCTGAAGAACACCATACTTTGTTTTAATATAAAATCATATGCATGTCTATTACTCTTATCATCTAAGTACAAGTTAAATACGAAGTAGTCTCTGTTGTGACTTTCGTCCTTTTGTCAAATGTTGATTATGGTATATACAAATTTGGATATGCATGTAGGAAATTCGCGTCTTCTCTTCCTCTTTCCTTTATGTGTTAAAGTCTCGGTTTCTTCTTCTTTTACCGT

mRNA sequence

CTTAATATCCCAATTACCAGTAGCCCAAATCCTAAACTCCAAAGCCCAAAGCCCAACATTCAAAAAATTAATAAAGTAATTAATATTATTCATCCATATATAAATGACCAAAATAGAAACGATACTATGCCGCGTTTGGAGAACGCGGGATACAATCTAATTTAATTATGTGCGTAAATTGAAAGCCAACTCCACCATCCTATAAATACTCGTTTCCAACCTGCCTTCATTTCTCTCTCCATCTCACCCTCTCTCACATCAATTCCGCCGAATTCAATGGCTTTACCTAATCAGCAAACTGTTGATTATCCTAGTTTCAAGCTTGTCATCGTCGGCGATGGTGGCACTGGAAAAACTACTTTTGTTAAGAGGCATCGTACCGGGGAGTTTGAAAAGAGATATGAACCAACTATTGGTGTAGAGGTTCACCCATTGGACTTCACCACAAACTGTGGGAAAATAAGATATTACTGCTGGGATACTGCCGGACAGGAGAAATTTGGAGGTCTTAGAGATGGTTACTATATCCACGGACAGTGTGCTATCATTATGTTTGATGTTACAGCCCGACTGACATACAAGAATGTTCCAACTTGGCATCGTGATCTTTGCAGGGTCTGTGAAAATATCCCCATTGTTCTCTGTGGGAACAAAGTTGATGTGAAGAACAGGCAAGTGAAGGCAAAGCAGGTTACATTTCACAGGAAGAAGAATCTGCAATACTATGAGATATCTGCAAAGAGCAACTACAACTATGAGAAGCCTTTCTTGTACCTTGCCAGGAAACTTGCTGGGGATGGTAATCTGTACTTTACAGAGGAGGTTGCCCTTATTCCGCCTGAAGTACAAATTGACCTGGCTGCGCAACAAATGCATGAAGCAGAACTTGCCCAAGCAGCTGCGCAGCCATTGCCAGATGATGATGATGATGCATTTGAGGCTTAATTAGTGGGGCAGGCTCTCAGGATCACTCTTTAGTAGTTTTGACCTTTAGGGGATGCACCTTCTGAAGAACACCATACTTTGTTTTAATATAAAATCATATGCATGTCTATTACTCTTATCATCTAAGTACAAGTTAAATACGAAGTAGTCTCTGTTGTGACTTTCGTCCTTTTGTCAAATGTTGATTATGGTATATACAAATTTGGATATGCATGTAGGAAATTCGCGTCTTCTCTTCCTCTTTCCTTTATGTGTTAAAGTCTCGGTTTCTTCTTCTTTTACCGT

Coding sequence (CDS)

ATGGCTTTACCTAATCAGCAAACTGTTGATTATCCTAGTTTCAAGCTTGTCATCGTCGGCGATGGTGGCACTGGAAAAACTACTTTTGTTAAGAGGCATCGTACCGGGGAGTTTGAAAAGAGATATGAACCAACTATTGGTGTAGAGGTTCACCCATTGGACTTCACCACAAACTGTGGGAAAATAAGATATTACTGCTGGGATACTGCCGGACAGGAGAAATTTGGAGGTCTTAGAGATGGTTACTATATCCACGGACAGTGTGCTATCATTATGTTTGATGTTACAGCCCGACTGACATACAAGAATGTTCCAACTTGGCATCGTGATCTTTGCAGGGTCTGTGAAAATATCCCCATTGTTCTCTGTGGGAACAAAGTTGATGTGAAGAACAGGCAAGTGAAGGCAAAGCAGGTTACATTTCACAGGAAGAAGAATCTGCAATACTATGAGATATCTGCAAAGAGCAACTACAACTATGAGAAGCCTTTCTTGTACCTTGCCAGGAAACTTGCTGGGGATGGTAATCTGTACTTTACAGAGGAGGTTGCCCTTATTCCGCCTGAAGTACAAATTGACCTGGCTGCGCAACAAATGCATGAAGCAGAACTTGCCCAAGCAGCTGCGCAGCCATTGCCAGATGATGATGATGATGCATTTGAGGCTTAA

Protein sequence

MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHRTGEFEKRYEPTIGVEVHPLDFTTNCGKIRYYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNYEKPFLYLARKLAGDGNLYFTEEVALIPPEVQIDLAAQQMHEAELAQAAAQPLPDDDDDAFEA

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo00002	Spo00002	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo00002.1	Spo00002.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00002.1.utr5p.1	Spo00002.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00002.1.CDS.8	Spo00002.1.CDS.8	CDS
Spo00002.1.CDS.7	Spo00002.1.CDS.7	CDS
Spo00002.1.CDS.6	Spo00002.1.CDS.6	CDS
Spo00002.1.CDS.5	Spo00002.1.CDS.5	CDS
Spo00002.1.CDS.4	Spo00002.1.CDS.4	CDS
Spo00002.1.CDS.3	Spo00002.1.CDS.3	CDS
Spo00002.1.CDS.2	Spo00002.1.CDS.2	CDS
Spo00002.1.CDS.1	Spo00002.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00002.1.utr3p.1	Spo00002.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00002.1.exon.8	Spo00002.1.exon.8	exon
Spo00002.1.exon.7	Spo00002.1.exon.7	exon
Spo00002.1.exon.6	Spo00002.1.exon.6	exon
Spo00002.1.exon.5	Spo00002.1.exon.5	exon
Spo00002.1.exon.4	Spo00002.1.exon.4	exon
Spo00002.1.exon.3	Spo00002.1.exon.3	exon
Spo00002.1.exon.2	Spo00002.1.exon.2	exon
Spo00002.1.exon.1	Spo00002.1.exon.1	exon

Homology

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BLAST of Spo00002.1 vs. NCBI nr
Match: gi|902222267|gb|KNA19142.1| (hypothetical protein SOVF_064390 [Spinacia oleracea])

HSP 1 Score: 466.1 bits (1198), Expect = 3.500e-128
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 1


		  
Query: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHRTGEFEKRYEPTIGVEVHPLDFTTNCG 60
           MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHRTGEFEKRYEPTIGVEVHPLDFTTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHRTGEFEKRYEPTIGVEVHPLDFTTNCG 60

Query: 61  KIRYYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRYYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRYYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNYEKPFLYLARKLAGDGNLYFT 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNYEKPFLYLARKLAGDGNLYFT
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNYEKPFLYLARKLAGDGNLYFT 180

Query: 181 EEVALIPPEVQIDLAAQQMHEAELAQAAAQPLPDDDDDAFEA 223
           EEVALIPPEVQIDLAAQQMHEAELAQAAAQPLPDDDDDAFEA
Sbjct: 181 EEVALIPPEVQIDLAAQQMHEAELAQAAAQPLPDDDDDAFEA 222

[Close]

BLAST of Spo00002.1 vs. NCBI nr
Match: gi|976902407|gb|KVH90353.1| (Ran GTPase, partial [Cynara cardunculus var. scolymus])

HSP 1 Score: 438.0 bits (1125), Expect = 1.000e-119
Identity = 207/221 (93.67%), Postives = 213/221 (96.38%), Query Frame = 1


		  
Query: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHRTGEFEKRYEPTIGVEVHPLDFTTNCG 60
           MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRH TGEFEK+YEPTIGVEVHPLDF TNCG
Sbjct: 53  MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 112

Query: 61  KIRYYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIR+YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 113 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 172

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNYEKPFLYLARKLAGDGNLYFT 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYN+EKPFLYLARKLAGD NL+F 
Sbjct: 173 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV 232

Query: 181 EEVALIPPEVQIDLAAQQMHEAELAQAAAQPLPDDDDDAFE 222
           E  AL PPEVQ DLAAQQ+HEAELAQAA+QPLPDDDDDAFE
Sbjct: 233 ESPALAPPEVQFDLAAQQLHEAELAQAASQPLPDDDDDAFE 273

[Close]

BLAST of Spo00002.1 vs. NCBI nr
Match: gi|702306622|ref|XP_010049961.1| (PREDICTED: GTP-binding nuclear protein Ran1A [Eucalyptus grandis])

HSP 1 Score: 436.8 bits (1122), Expect = 2.300e-119
Identity = 207/221 (93.67%), Postives = 212/221 (95.93%), Query Frame = 1


		  
Query: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHRTGEFEKRYEPTIGVEVHPLDFTTNCG 60
           MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRH TGEFEK+YEPTIGVEVHPLDF TNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRYYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIR+YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNYEKPFLYLARKLAGDGNLYFT 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYN+EKPFLYLARKLAGD NL+F 
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV 180

Query: 181 EEVALIPPEVQIDLAAQQMHEAELAQAAAQPLPDDDDDAFE 222
           E  AL PPEV IDLAAQQ HEAELAQAA+QPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELAQAASQPLPDDDDDAFE 221

[Close]

BLAST of Spo00002.1 vs. NCBI nr
Match: gi|950974787|ref|XP_014500980.1| (PREDICTED: GTP-binding nuclear protein Ran-3-like [Vigna radiata var. radiata])

HSP 1 Score: 436.4 bits (1121), Expect = 3.000e-119
Identity = 207/221 (93.67%), Postives = 212/221 (95.93%), Query Frame = 1


		  
Query: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHRTGEFEKRYEPTIGVEVHPLDFTTNCG 60
           MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRH TGEFEK+YEPTIGVEVHPLDF TNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRYYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIR+YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNYEKPFLYLARKLAGDGNLYFT 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYN+EKPFLYLARKLAGD NL+F 
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV 180

Query: 181 EEVALIPPEVQIDLAAQQMHEAELAQAAAQPLPDDDDDAFE 222
           E  AL PPEVQIDLAAQQ HEAELA AA+QPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]

BLAST of Spo00002.1 vs. NCBI nr
Match: gi|848894340|ref|XP_012847206.1| (PREDICTED: GTP-binding nuclear protein Ran-3 [Erythranthe guttata])

HSP 1 Score: 436.4 bits (1121), Expect = 3.000e-119
Identity = 205/221 (92.76%), Postives = 213/221 (96.38%), Query Frame = 1


		  
Query: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHRTGEFEKRYEPTIGVEVHPLDFTTNCG 60
           MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRH TGEFEK+YEPTIGVEVHPLDF TNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRYYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIR+YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNYEKPFLYLARKLAGDGNLYFT 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYN+EKPFLYLARKLAGD NL+F 
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 EEVALIPPEVQIDLAAQQMHEAELAQAAAQPLPDDDDDAFE 222
           E  AL PPEVQID+AAQQ+HE ELAQAA+QPLPDDDDDAF+
Sbjct: 181 ESPALAPPEVQIDMAAQQLHEQELAQAASQPLPDDDDDAFD 221

[Close]

BLAST of Spo00002.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RJX6_SPIOL (GTP-binding nuclear protein OS=Spinacia oleracea GN=SOVF_064390 PE=3 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 2.400e-128
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 1


		  
Query: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHRTGEFEKRYEPTIGVEVHPLDFTTNCG 60
           MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHRTGEFEKRYEPTIGVEVHPLDFTTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHRTGEFEKRYEPTIGVEVHPLDFTTNCG 60

Query: 61  KIRYYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRYYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRYYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNYEKPFLYLARKLAGDGNLYFT 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNYEKPFLYLARKLAGDGNLYFT
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNYEKPFLYLARKLAGDGNLYFT 180

Query: 181 EEVALIPPEVQIDLAAQQMHEAELAQAAAQPLPDDDDDAFEA 223
           EEVALIPPEVQIDLAAQQMHEAELAQAAAQPLPDDDDDAFEA
Sbjct: 181 EEVALIPPEVQIDLAAQQMHEAELAQAAAQPLPDDDDDAFEA 222

[Close]

BLAST of Spo00002.1 vs. UniProtKB/TrEMBL
Match: A0A103XGT5_CYNCS (GTP-binding nuclear protein (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_007675 PE=3 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 7.100e-120
Identity = 207/221 (93.67%), Postives = 213/221 (96.38%), Query Frame = 1


		  
Query: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHRTGEFEKRYEPTIGVEVHPLDFTTNCG 60
           MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRH TGEFEK+YEPTIGVEVHPLDF TNCG
Sbjct: 53  MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 112

Query: 61  KIRYYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIR+YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 113 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 172

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNYEKPFLYLARKLAGDGNLYFT 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYN+EKPFLYLARKLAGD NL+F 
Sbjct: 173 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV 232

Query: 181 EEVALIPPEVQIDLAAQQMHEAELAQAAAQPLPDDDDDAFE 222
           E  AL PPEVQ DLAAQQ+HEAELAQAA+QPLPDDDDDAFE
Sbjct: 233 ESPALAPPEVQFDLAAQQLHEAELAQAASQPLPDDDDDAFE 273

[Close]

BLAST of Spo00002.1 vs. UniProtKB/TrEMBL
Match: A0A059CWD7_EUCGR (GTP-binding nuclear protein OS=Eucalyptus grandis GN=EUGRSUZ_C04168 PE=3 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 1.600e-119
Identity = 207/221 (93.67%), Postives = 212/221 (95.93%), Query Frame = 1


		  
Query: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHRTGEFEKRYEPTIGVEVHPLDFTTNCG 60
           MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRH TGEFEK+YEPTIGVEVHPLDF TNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRYYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIR+YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNYEKPFLYLARKLAGDGNLYFT 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYN+EKPFLYLARKLAGD NL+F 
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV 180

Query: 181 EEVALIPPEVQIDLAAQQMHEAELAQAAAQPLPDDDDDAFE 222
           E  AL PPEV IDLAAQQ HEAELAQAA+QPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELAQAASQPLPDDDDDAFE 221

[Close]

BLAST of Spo00002.1 vs. UniProtKB/TrEMBL
Match: I3T626_LOTJA (GTP-binding nuclear protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 2.100e-119
Identity = 206/221 (93.21%), Postives = 213/221 (96.38%), Query Frame = 1


		  
Query: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHRTGEFEKRYEPTIGVEVHPLDFTTNCG 60
           MALPNQQTVDYP+FKLVIVGDGGTGKTTFVKRH TGEFEK+YEPTIGVEVHPLDF TNCG
Sbjct: 1   MALPNQQTVDYPNFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRYYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIR+YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNYEKPFLYLARKLAGDGNLYFT 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYN+EKPFLYLARKLAGD NL+F 
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV 180

Query: 181 EEVALIPPEVQIDLAAQQMHEAELAQAAAQPLPDDDDDAFE 222
           E  AL PPEVQIDLAAQQ HEAELAQAA+QPLPDDDDDAF+
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAQAASQPLPDDDDDAFD 221

[Close]

BLAST of Spo00002.1 vs. UniProtKB/TrEMBL
Match: A0A0L9UVB1_PHAAN (GTP-binding nuclear protein OS=Phaseolus angularis GN=LR48_Vigan04g215600 PE=3 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 2.100e-119
Identity = 207/221 (93.67%), Postives = 212/221 (95.93%), Query Frame = 1


		  
Query: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHRTGEFEKRYEPTIGVEVHPLDFTTNCG 60
           MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRH TGEFEK+YEPTIGVEVHPLDF TNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRYYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIR+YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNYEKPFLYLARKLAGDGNLYFT 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYN+EKPFLYLARKLAGD NL+F 
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV 180

Query: 181 EEVALIPPEVQIDLAAQQMHEAELAQAAAQPLPDDDDDAFE 222
           E  AL PPEVQIDLAAQQ HEAELA AA+QPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]

BLAST of Spo00002.1 vs. ExPASy Swiss-Prot
Match: RAN3_ARATH (GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana GN=RAN3 PE=1 SV=2)

HSP 1 Score: 435.6 bits (1119), Expect = 3.200e-121
Identity = 206/221 (93.21%), Postives = 211/221 (95.48%), Query Frame = 1


		  
Query: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHRTGEFEKRYEPTIGVEVHPLDFTTNCG 60
           MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRH TGEFEK+YEPTIGVEVHPLDF TNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRYYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIR+YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNYEKPFLYLARKLAGDGNLYFT 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYN+EKPFLYLARKLAGD NL+F 
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 EEVALIPPEVQIDLAAQQMHEAELAQAAAQPLPDDDDDAFE 222
           E  AL PPEVQIDLAAQQ HEAELA AA+QPLPDDDDD FE
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221

[Close]

BLAST of Spo00002.1 vs. ExPASy Swiss-Prot
Match: RAN1_SOLLC (GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum GN=RAN1 PE=2 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 4.500e-120
Identity = 204/221 (92.31%), Postives = 210/221 (95.02%), Query Frame = 1


		  
Query: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHRTGEFEKRYEPTIGVEVHPLDFTTNCG 60
           MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRH TGEFEK+YEPTIGVEVHPLDF TNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRYYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIR+YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNYEKPFLYLARKLAGDGNLYFT 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYN+EKPFLYLARKLAGDGNL+F 
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDGNLHFV 180

Query: 181 EEVALIPPEVQIDLAAQQMHEAELAQAAAQPLPDDDDDAFE 222
           E  AL PPEV IDLAAQ +HE EL QAA QPLPDDDD+AFE
Sbjct: 181 ESPALAPPEVHIDLAAQALHEEELQQAANQPLPDDDDEAFE 221

[Close]

BLAST of Spo00002.1 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSJ (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica GN=RAN1 PE=2 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 7.800e-120
Identity = 203/221 (91.86%), Postives = 210/221 (95.02%), Query Frame = 1


		  
Query: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHRTGEFEKRYEPTIGVEVHPLDFTTNCG 60
           MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRH TGEFEK+YEPTIGVEVHPLDF TNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRYYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIR+YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVT+RLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNYEKPFLYLARKLAGDGNLYFT 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE+SAKSNYN+EKPFLYLARKLAGDGNL+F 
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEVSAKSNYNFEKPFLYLARKLAGDGNLHFV 180

Query: 181 EEVALIPPEVQIDLAAQQMHEAELAQAAAQPLPDDDDDAFE 222
           E  AL PP+V IDLAAQQ HEAELA AAAQPLPDDDDD  E
Sbjct: 181 ETPALAPPDVTIDLAAQQQHEAELAAAAAQPLPDDDDDLIE 221

[Close]

BLAST of Spo00002.1 vs. ExPASy Swiss-Prot
Match: RANB1_TOBAC (GTP-binding nuclear protein Ran-B1 OS=Nicotiana tabacum GN=RAN-B1 PE=2 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 7.800e-120
Identity = 204/221 (92.31%), Postives = 210/221 (95.02%), Query Frame = 1


		  
Query: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHRTGEFEKRYEPTIGVEVHPLDFTTNCG 60
           MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRH TGEFEK+YEPTIGVEVHPLDF TNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRYYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIR+YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNYEKPFLYLARKLAGDGNLYFT 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYN+EKPFLYLARKLAGD NL+F 
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 EEVALIPPEVQIDLAAQQMHEAELAQAAAQPLPDDDDDAFE 222
           E  AL PPEVQIDLAAQQ+HE EL QAAA  LPDDDD+AFE
Sbjct: 181 ESPALAPPEVQIDLAAQQLHEQELLQAAAHALPDDDDEAFE 221

[Close]

BLAST of Spo00002.1 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSI (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica GN=RAN1 PE=2 SV=2)

HSP 1 Score: 431.0 bits (1107), Expect = 7.800e-120
Identity = 203/221 (91.86%), Postives = 210/221 (95.02%), Query Frame = 1


		  
Query: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHRTGEFEKRYEPTIGVEVHPLDFTTNCG 60
           MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRH TGEFEK+YEPTIGVEVHPLDF TNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRYYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIR+YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVT+RLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNYEKPFLYLARKLAGDGNLYFT 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE+SAKSNYN+EKPFLYLARKLAGDGNL+F 
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEVSAKSNYNFEKPFLYLARKLAGDGNLHFV 180

Query: 181 EEVALIPPEVQIDLAAQQMHEAELAQAAAQPLPDDDDDAFE 222
           E  AL PP+V IDLAAQQ HEAELA AAAQPLPDDDDD  E
Sbjct: 181 ETPALAPPDVTIDLAAQQQHEAELAAAAAQPLPDDDDDLIE 221

[Close]

BLAST of Spo00002.1 vs. TAIR (Arabidopsis)
Match: AT5G55190.1 (RAN GTPase 3)

HSP 1 Score: 435.6 bits (1119), Expect = 1.800e-122
Identity = 206/221 (93.21%), Postives = 211/221 (95.48%), Query Frame = 1


		  
Query: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHRTGEFEKRYEPTIGVEVHPLDFTTNCG 60
           MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRH TGEFEK+YEPTIGVEVHPLDF TNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRYYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIR+YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNYEKPFLYLARKLAGDGNLYFT 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYN+EKPFLYLARKLAGD NL+F 
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 EEVALIPPEVQIDLAAQQMHEAELAQAAAQPLPDDDDDAFE 222
           E  AL PPEVQIDLAAQQ HEAELA AA+QPLPDDDDD FE
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221

[Close]

BLAST of Spo00002.1 vs. TAIR (Arabidopsis)
Match: AT5G20020.1 (RAS-related GTP-binding nuclear protein 2)

HSP 1 Score: 430.3 bits (1105), Expect = 7.500e-121
Identity = 203/221 (91.86%), Postives = 211/221 (95.48%), Query Frame = 1


		  
Query: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHRTGEFEKRYEPTIGVEVHPLDFTTNCG 60
           MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRH TGEFEK+YEPTIGVEVHPLDF TNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRYYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIR+YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNYEKPFLYLARKLAGDGNLYFT 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYN+EKPFLYLARKLAGD NL+F 
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 EEVALIPPEVQIDLAAQQMHEAELAQAAAQPLPDDDDDAFE 222
           E  AL PPEV +D+AAQQ +EA+LA AAAQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221

[Close]

BLAST of Spo00002.1 vs. TAIR (Arabidopsis)
Match: AT5G20010.1 (RAS-related nuclear protein-1)

HSP 1 Score: 427.6 bits (1098), Expect = 4.800e-120
Identity = 203/221 (91.86%), Postives = 209/221 (94.57%), Query Frame = 1


		  
Query: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHRTGEFEKRYEPTIGVEVHPLDFTTNCG 60
           MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRH TGEFEK+YEPTIGVEVHPLDF TNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRYYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIR+YCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNYEKPFLYLARKLAGDGNLYFT 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYN+EKPFLYLARKLAGD NL+F 
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 EEVALIPPEVQIDLAAQQMHEAELAQAAAQPLPDDDDDAFE 222
           E  AL PPEV ID+A QQ +EAEL QAAAQPLPDDDDD FE
Sbjct: 181 ETPALAPPEVHIDIADQQKNEAELLQAAAQPLPDDDDDIFE 221

[Close]

BLAST of Spo00002.1 vs. TAIR (Arabidopsis)
Match: AT5G55080.1 (ras-related nuclear protein 4)

HSP 1 Score: 301.2 bits (770), Expect = 5.200e-82
Identity = 143/212 (67.45%), Postives = 168/212 (79.25%), Query Frame = 1


		  
Query: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHRTGEFEKRYEPTIGVEVHPLDFTTNCG 60
           MALPNQQ VD P+FKL+IVGDGGTGKTTF+KRH TGEFE   EPT+GV+++PLDF TN G
Sbjct: 1   MALPNQQNVDLPTFKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRG 60

Query: 61  KIRYYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIR+ CWDTAGQEK+ GL+D YYIHGQCAIIMFDVTAR TY N+  W+RDL RVC+NIPI
Sbjct: 61  KIRFECWDTAGQEKYSGLKDAYYIHGQCAIIMFDVTARHTYMNIDRWYRDLRRVCKNIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNYEKPFLYLARKLAGDGNLYFT 180
           VLCGNKVDV +RQ+K K V++HRKK LQYYE+SAK+N N+EKPFLYLAR++AGD  L F 
Sbjct: 121 VLCGNKVDVPSRQIKPKHVSYHRKKCLQYYEMSAKNNCNFEKPFLYLARRIAGDAKLSFV 180

Query: 181 EEVALIPPEVQIDLAAQQMHEAELAQAAAQPL 213
           E      PE QID    +  +    +A  QPL
Sbjct: 181 ES-----PEAQIDNLDVESLQLLTVEAGTQPL 207

[Close]

BLAST of Spo00002.1 vs. TAIR (Arabidopsis)
Match: AT5G39620.1 (RAB GTPase homolog G1)

HSP 1 Score: 104.4 bits (259), Expect = 9.400e-23
Identity = 54/166 (32.53%), Postives = 91/166 (54.82%), Query Frame = 1


		  
Query: 15  KLVIVGDGGTGKTTFVKRHRTGEFEKRYEPTIGVEVHPLDFTTNCGKIRYYCWDTAGQEK 74
           K++++GD G GKT+ +KR+   +F++ +  TI V++   +      ++    WDTAGQE+
Sbjct: 7   KIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDTAGQER 66

Query: 75  FGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-----NIPIVLCGNKVDV 134
           F  L   +Y    C ++++DV    T++++  WH +  +          P VL GNK DV
Sbjct: 67  FKSLPSRFYRDTDCCVLVYDVNTLKTFESIDNWHDEFIKQANPETPTKFPFVLMGNKTDV 126

Query: 135 KN--RQVKAKQVTFH---RKKNLQYYEISAKSNYNYEKPFLYLARK 171
            N   +V AK++       K N+ Y+E SAK+  N E+ FL +A+K
Sbjct: 127 NNGKPRVVAKEIADQWCGSKGNIVYFETSAKAKINVEEAFLEIAKK 172

The following BLAST results are available for this feature:

BLAST of Spo00002.1 vs. NCBI nr
BLAST of Spo00002.1 vs. UniProtKB/TrEMBL
BLAST of Spo00002.1 vs. ExPASy Swiss-Prot
BLAST of Spo00002.1 vs. TAIR (Arabidopsis)

BLAST of Spo00002.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902222267\|gb\|KNA19142.1\|	3.5e-128	100.	hypothetical protein SOVF_0643...	[more]
gi\|976902407\|gb\|KVH90353.1\|	1.0e-119	93.6	Ran GTPase, partial [Cynara ca...	[more]
gi\|702306622\|ref\|XP_010049961.1\|	2.3e-119	93.6	PREDICTED: GTP-binding nuclear...	[more]
gi\|950974787\|ref\|XP_014500980.1\|	3.0e-119	93.6	PREDICTED: GTP-binding nuclear...	[more]
gi\|848894340\|ref\|XP_012847206.1\|	3.0e-119	92.7	PREDICTED: GTP-binding nuclear...	[more]

BLAST of Spo00002.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RJX6_SPIOL	2.4e-128	100.	GTP-binding nuclear protein OS...	[more]
A0A103XGT5_CYNCS	7.1e-120	93.6	GTP-binding nuclear protein (F...	[more]
A0A059CWD7_EUCGR	1.6e-119	93.6	GTP-binding nuclear protein OS...	[more]
I3T626_LOTJA	2.1e-119	93.2	GTP-binding nuclear protein OS...	[more]
A0A0L9UVB1_PHAAN	2.1e-119	93.6	GTP-binding nuclear protein OS...	[more]

BLAST of Spo00002.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
RAN3_ARATH	3.2e-121	93.2	GTP-binding nuclear protein Ra...	[more]
RAN1_SOLLC	4.5e-120	92.3	GTP-binding nuclear protein Ra...	[more]
RAN1_ORYSJ	7.8e-120	91.8	GTP-binding nuclear protein Ra...	[more]
RANB1_TOBAC	7.8e-120	92.3	GTP-binding nuclear protein Ra...	[more]
RAN1_ORYSI	7.8e-120	91.8	GTP-binding nuclear protein Ra...	[more]

BLAST of Spo00002.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G55190.1	1.8e-122	93.2	RAN GTPase 3	[more]
AT5G20020.1	7.5e-121	91.8	RAS-related GTP-binding nuclea...	[more]
AT5G20010.1	4.8e-120	91.8	RAS-related nuclear protein-1	[more]
AT5G55080.1	5.2e-82	67.4	ras-related nuclear protein 4	[more]
AT5G39620.1	9.4e-23	32.5	RAB GTPase homolog G1	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 15..171 score: 2.4
IPR002041	Ran GTPase	PRINTS	PR00627	GTPRANTC4	coord: 74..92 score: 6.0E-56coord: 27..41 score: 6.0E-56coord: 94..115 score: 6.0E-56coord: 130..148 score: 6.0E-56coord: 168..190 score: 6.0
IPR002041	Ran GTPase	PROFILE	PS51418	RAN	coord: 7..171 score: 29
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 14..162 score: 9.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 9..181 score: 7.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 14..182 score: 6.62
None	No IPR available	PANTHER	PTHR24071	FAMILY NOT NAMED	coord: 1..222 score: 1.9E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..174 score: 2.6
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 16..174 score: 3.
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..174 score: 1.6
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..220 score: 1.5E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0007165	signal transduction
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0006406	mRNA export from nucleus
biological_process	GO:0006606	protein import into nucleus
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005515	protein binding