Spo00211.1 (mRNA) | SpinachBase

Overview


Name	Spo00211.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	60S ribosomal protein l9
Location	chr1 : 30979284 .. 30982097 (-)
Sequence length	1133

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAATTAATAAAGAAAACTTTGCTCTTTAGAGCAATATGTTAGGGACGGGAAAGTAAATAAATTAAAAAAAAGAAAGAAAAGACACACACACAAATCATACTCCCCCCGTTCTTGTTCTTCATCAAACCCTACCTCCCCTGAAACCGTAGGAGAGAGAATCCACCATCAACAATGAAGCTCGTACGTTCCTCCGACTCCATGGAAATCCCGGAAGGGATCGACATAAAGGTCGACGCCAAGATCATCGTCGTTTCAGGTCCAAGGGGTACTCTCTCCCGCAACTTCAAGCATCTCAACCTCGATTTCGAGCTTGTTACTGATGAAGAAGGGAAGAAGAAGTTGAACATTGATTCTTGGTTTGGAACCAGGAAGACCTCCGCTTCCATCCGTACTGCTATCTCTCACATTGAGAATCTTATTACTGGTGTTACCAAGGGTTACCGCTACAAAATGAGGATGGTGTACGCTCATTTTCCCATCAATGCTAGTATTACTAACTCTAACAAGAGCATTGAGATCCGTAACTTTCTTGGCGAGAAGAGGGTAATTTTCTCTATCTATCTCTCACACTCTTAATTTATGAGTAAATTATTGATTGCCATCTAATTGTTTCAGTTGTATTTCATCTTTATCTTATTGATTCAATCTTTGTAAATGCTCGTTTTCCTCTGAATATATGTTTTGTTCAATGATAGTTATGGATTTCTGGGAGGAATGCTAAATCTCAAGTGGCTTTTTTCCGTACAACTATTTTTTGTACCAACACATAATATTTCACTACCAAAAACGCAAATGATTAGTATATCAATGCCATATCAGTCTCAGTACCAATACCAAATTAATCTCAGTACGGCAGTACCAATACCAAATTAATGGTTACTAATACGAGCCACTTGAGGCATAGAGTTCCTCGATTTCTGATGTGTTTAATTGATTCTGCCAAACAAAAGGACTGGACTTTTGGGGATTTTCCAAGAGTTATTTAATATAAGAATTTAACCCCAAATTTGTTTGTATCATTGAAATTATGATGTTTGTGTGGTGCGTTTGGTTTTGTATAGGTTTTTTCTTAATTTGGTTTTGGGAGTAATCTGCTGTTAGTTTGTTTTGATAATCGGAAGAGAAAGTAAATCTTAAAAAAGAATGTTTTTGCTGCTTAAATTTAAATTGGCAGTGACTTTCATTTGCAATGTTTATTAGTGTTGTGATTTTTGATCTAGTTCTGGTTACCTGTAAAATGGTAGTGGATTATCTACTGATATATTTTGCTACGAACTTGTAGTATTTTGGTTGACAAATAGACCAATAGCAGGGTTGTGGTTTTGGTGATTGTGTTGATCTCATATTTTAATGCTACTGTGGTCATAGATTATTTGACACTAGTTTGGTGGTTGCTAAATTTGGCCCAGTGCACATGATTGTATTGATCTGTGCCTCTTTTTCCAAGCTGCATTTCCATTGAGTTACTATAGTAGTGATTGATGTTCTTAATTATGTGAAAGTTGGTATATGAGTTACTCCCGTATAATGTAGTGTTGCTTTGATCTTGTTGTAACATTCGTTGGCCTGCAACGTTTCGTCTGCCAATGAGGCATGAGTTTCATAGTGTGCTTACTCTTTTCATTGATGATTATACTTGTGCCTCTTGTTAAGACATCCCACTTGTGCTAATTGGTTCAGTGACTTACTTGGGAAACTTATTTTTATTTTTTTTTATTTTTTTATAGCGTATCTGAAAAGTATGCTATGCGGGTGGTTTGCTGGAACCTGTGAAAATCAGATTCAGCAGTCTTAGGTTCTATTTCAAAAAAATTGACTGTTGGAGTTTTTATACAGGAGGGATGGTGATTAAAAATGTCTGGTTTTATGATGGTTTCTGTTTTGTTATTTATGTTCCATAGTCCTGGTATTTTTGTTAGGGATTCACCTTTGTCCAGTTCTAGTTGCCTAAGCTTTTATTTTTCTTCTTATATTTACTTTCCCTTTGTGATGCCCTCTTGAACCCCATTGCTATATTTTCTCAGTAATATACTTGGTGTATTCTTTTGATGGTTGTGGTGATTTTATTTTTCTGTTATTTATAAGTTGTTTGATTTGTGGAGTATTGATCTGTGGTGCTGATTATTTATCCTTTCCAGGTAAGGAAGGTTGATATGTTGGAGGGAGTTTCAATATTGAGATCCGAGAAGGTCAAGGATGAGCTCGTCTTAGACGGAAGTGATATCGAGCTTGTTTCTCGATCTGCTGCCCTAATTAACCAGGTACTTTTTGGGATTTCATTGATCACTCTACTCGTGGTGCTGTTTGTTTTACAAGATATCTAATTTTTTGTTTTTCTCTTGTGCAGAAATGCCATGTCAAGAATAAGGATATCAGGAAGTTTCTTGACGGTATCTATGTCAGTGAGAAGGGAAGGATCGTTGAAGAGGAGTAACCTATATGATGAGGCATTAGAACAGGATTTGATAGATTTTATGTTTCCATGTTACAATTTTGAGTTGGGTATATATTGCCTTCATTAGTTGCCATTTATATTTTTCATATAATAATATTTTTTTTTTTTTTTTTTGAGGGATATAATAATATTTAATTGGAAAATTGGTCAGAAAAGACCTTTTAAAACCAAAAAATTGTCAAAAATGAACTTTTAAAAAAAAAGTGGTGAAAGAAGGCCCAATTGGAATTTTTTGTTGTCAATAAGGACCAAGAGTGATTTTCCGATGGTCAACTCTCGGATTCCGGCGTTGACCAACACGTGTCACACACATGGATTAAAAAAAAAAAATTAAAATTTTCCCTCCAATTTACCCC

mRNA sequence

CAAAAATTAATAAAGAAAACTTTGCTCTTTAGAGCAATATGTTAGGGACGGGAAAGTAAATAAATTAAAAAAAAGAAAGAAAAGACACACACACAAATCATACTCCCCCCGTTCTTGTTCTTCATCAAACCCTACCTCCCCTGAAACCGTAGGAGAGAGAATCCACCATCAACAATGAAGCTCGTACGTTCCTCCGACTCCATGGAAATCCCGGAAGGGATCGACATAAAGGTCGACGCCAAGATCATCGTCGTTTCAGGTCCAAGGGGTACTCTCTCCCGCAACTTCAAGCATCTCAACCTCGATTTCGAGCTTGTTACTGATGAAGAAGGGAAGAAGAAGTTGAACATTGATTCTTGGTTTGGAACCAGGAAGACCTCCGCTTCCATCCGTACTGCTATCTCTCACATTGAGAATCTTATTACTGGTGTTACCAAGGGTTACCGCTACAAAATGAGGATGGTGTACGCTCATTTTCCCATCAATGCTAGTATTACTAACTCTAACAAGAGCATTGAGATCCGTAACTTTCTTGGCGAGAAGAGGGTAAGGAAGGTTGATATGTTGGAGGGAGTTTCAATATTGAGATCCGAGAAGGTCAAGGATGAGCTCGTCTTAGACGGAAGTGATATCGAGCTTGTTTCTCGATCTGCTGCCCTAATTAACCAGAAATGCCATGTCAAGAATAAGGATATCAGGAAGTTTCTTGACGGTATCTATGTCAGTGAGAAGGGAAGGATCGTTGAAGAGGAGTAACCTATATGATGAGGCATTAGAACAGGATTTGATAGATTTTATGTTTCCATGTTACAATTTTGAGTTGGGTATATATTGCCTTCATTAGTTGCCATTTATATTTTTCATATAATAATATTTTTTTTTTTTTTTTTTGAGGGATATAATAATATTTAATTGGAAAATTGGTCAGAAAAGACCTTTTAAAACCAAAAAATTGTCAAAAATGAACTTTTAAAAAAAAAGTGGTGAAAGAAGGCCCAATTGGAATTTTTTGTTGTCAATAAGGACCAAGAGTGATTTTCCGATGGTCAACTCTCGGATTCCGGCGTTGACCAACACGTGTCACACACATGGATTAAAAAAAAAAAATTAAAATTTTCCCTCCAATTTACCCC

Coding sequence (CDS)

ATGAAGCTCGTACGTTCCTCCGACTCCATGGAAATCCCGGAAGGGATCGACATAAAGGTCGACGCCAAGATCATCGTCGTTTCAGGTCCAAGGGGTACTCTCTCCCGCAACTTCAAGCATCTCAACCTCGATTTCGAGCTTGTTACTGATGAAGAAGGGAAGAAGAAGTTGAACATTGATTCTTGGTTTGGAACCAGGAAGACCTCCGCTTCCATCCGTACTGCTATCTCTCACATTGAGAATCTTATTACTGGTGTTACCAAGGGTTACCGCTACAAAATGAGGATGGTGTACGCTCATTTTCCCATCAATGCTAGTATTACTAACTCTAACAAGAGCATTGAGATCCGTAACTTTCTTGGCGAGAAGAGGGTAAGGAAGGTTGATATGTTGGAGGGAGTTTCAATATTGAGATCCGAGAAGGTCAAGGATGAGCTCGTCTTAGACGGAAGTGATATCGAGCTTGTTTCTCGATCTGCTGCCCTAATTAACCAGAAATGCCATGTCAAGAATAAGGATATCAGGAAGTTTCTTGACGGTATCTATGTCAGTGAGAAGGGAAGGATCGTTGAAGAGGAGTAA

Protein sequence

MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNIDSWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFLGEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGRIVEEE

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo00211	Spo00211	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo00211.1	Spo00211.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00211.1.utr5p.1	Spo00211.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00211.1.CDS.3	Spo00211.1.CDS.3	CDS
Spo00211.1.CDS.2	Spo00211.1.CDS.2	CDS
Spo00211.1.CDS.1	Spo00211.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00211.1.utr3p.1	Spo00211.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00211.1.exon.3	Spo00211.1.exon.3	exon
Spo00211.1.exon.2	Spo00211.1.exon.2	exon
Spo00211.1.exon.1	Spo00211.1.exon.1	exon

Homology

[Close]

BLAST of Spo00211.1 vs. NCBI nr
Match: gi|902211000|gb|KNA16589.1| (hypothetical protein SOVF_087850 [Spinacia oleracea])

HSP 1 Score: 372.5 bits (955), Expect = 4.500e-100
Identity = 190/193 (98.45%), Postives = 192/193 (99.48%), Query Frame = 1


		  
Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60
           MKLVRSSDSM+IPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID
Sbjct: 1   MKLVRSSDSMDIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60

Query: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFL 120
           SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNK IEIRNFL
Sbjct: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKGIEIRNFL 120

Query: 121 GEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180
           GEKRVRKVDMLEGV+ILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG
Sbjct: 121 GEKRVRKVDMLEGVTILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180

Query: 181 IYVSEKGRIVEEE 194
           IYVSEKGRIVEEE
Sbjct: 181 IYVSEKGRIVEEE 193

[Close]

BLAST of Spo00211.1 vs. NCBI nr
Match: gi|731321334|ref|XP_010671296.1| (PREDICTED: 60S ribosomal protein L9-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 347.4 bits (890), Expect = 1.600e-92
Identity = 175/193 (90.67%), Postives = 186/193 (96.37%), Query Frame = 1


		  
Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60
           MK V SSD MEIPEGI++KVDAKIIVVSGPRGTL+RNFKHLNLDF++ T+E+GKK L ID
Sbjct: 1   MKQVLSSDFMEIPEGIELKVDAKIIVVSGPRGTLTRNFKHLNLDFQITTNEDGKKILKID 60

Query: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFL 120
           SWFGTRKTSA+IRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITN+NKSIEIRNFL
Sbjct: 61  SWFGTRKTSAAIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNTNKSIEIRNFL 120

Query: 121 GEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180
           GEKRVRKVDML+GVSILRSEKVKDELVLDG+DIELVSRSAALINQKCHVKNKDIRKFLDG
Sbjct: 121 GEKRVRKVDMLDGVSILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDG 180

Query: 181 IYVSEKGRIVEEE 194
           IYVSEKGRI EEE
Sbjct: 181 IYVSEKGRIAEEE 193

[Close]

BLAST of Spo00211.1 vs. NCBI nr
Match: gi|743887138|ref|XP_011038051.1| (PREDICTED: 60S ribosomal protein L9 [Populus euphratica])

HSP 1 Score: 330.9 bits (847), Expect = 1.500e-87
Identity = 161/193 (83.42%), Postives = 181/193 (93.78%), Query Frame = 1


		  
Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60
           MK + SS++M+IP+G+ IK+ A+II V GPRG LSRNFKHLNLDF+L+ DEEGK+KL ID
Sbjct: 1   MKTILSSETMDIPDGVKIKISARIIEVEGPRGKLSRNFKHLNLDFQLIKDEEGKRKLKID 60

Query: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFL 120
           +WFGTRKTSA+IRTA+SH+ENLITGVT+GYRYKMR VYAHFPINASITNSN +IEIRNFL
Sbjct: 61  AWFGTRKTSAAIRTALSHVENLITGVTRGYRYKMRFVYAHFPINASITNSNTAIEIRNFL 120

Query: 121 GEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180
           GEK+VRKVDMLEGVSILRSEKVKDELVLDG+DIELVSRSAALINQKCHVKNKDIRKFLDG
Sbjct: 121 GEKKVRKVDMLEGVSILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDG 180

Query: 181 IYVSEKGRIVEEE 194
           IYVSEKG +VEEE
Sbjct: 181 IYVSEKGTVVEEE 193

[Close]

BLAST of Spo00211.1 vs. NCBI nr
Match: gi|743887136|ref|XP_011038050.1| (PREDICTED: 60S ribosomal protein L9-like [Populus euphratica])

HSP 1 Score: 330.5 bits (846), Expect = 2.000e-87
Identity = 160/193 (82.90%), Postives = 181/193 (93.78%), Query Frame = 1


		  
Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60
           MK + SS++M+IP+G+ IK+ A+II V GPRG LSRNFKHLNLDF+L+ DEEGK+KL ID
Sbjct: 1   MKTILSSETMDIPDGVKIKISARIIEVEGPRGKLSRNFKHLNLDFQLIKDEEGKRKLKID 60

Query: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFL 120
           +WFGTRKTSA+IRTA+SH+ENLITGVT+GYRYKMR VYAHFPINASITNSN +IEIRNFL
Sbjct: 61  AWFGTRKTSAAIRTALSHVENLITGVTRGYRYKMRFVYAHFPINASITNSNTAIEIRNFL 120

Query: 121 GEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180
           GEK+VRKVDMLEGVSILRSEKVKDEL+LDG+DIELVSRSAALINQKCHVKNKDIRKFLDG
Sbjct: 121 GEKKVRKVDMLEGVSILRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDG 180

Query: 181 IYVSEKGRIVEEE 194
           IYVSEKG +VEEE
Sbjct: 181 IYVSEKGTVVEEE 193

[Close]

BLAST of Spo00211.1 vs. NCBI nr
Match: gi|743887132|ref|XP_011038049.1| (PREDICTED: 60S ribosomal protein L9-like [Populus euphratica])

HSP 1 Score: 329.7 bits (844), Expect = 3.400e-87
Identity = 160/193 (82.90%), Postives = 181/193 (93.78%), Query Frame = 1


		  
Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60
           MK + SS++M+IP+G+ IK+ A+II V GPRG LSRNFKHLNLDF+L+ DEEGK+KL ID
Sbjct: 1   MKTILSSETMDIPDGVKIKISARIIEVEGPRGKLSRNFKHLNLDFQLIKDEEGKRKLKID 60

Query: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFL 120
           +WFGTRKTSA+IRTA+SH+ENLITGVT+GYRYKMR VYAHFPINASITNSN +IEIRNFL
Sbjct: 61  AWFGTRKTSAAIRTALSHVENLITGVTRGYRYKMRFVYAHFPINASITNSNTAIEIRNFL 120

Query: 121 GEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180
           GEK+VRKVDMLEGVSI+RSEKVKDELVLDG+DIELVSRSAALINQKCHVKNKDIRKFLDG
Sbjct: 121 GEKKVRKVDMLEGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDG 180

Query: 181 IYVSEKGRIVEEE 194
           IYVSEKG +VEEE
Sbjct: 181 IYVSEKGTVVEEE 193

[Close]

BLAST of Spo00211.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RC61_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_087850 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 3.200e-100
Identity = 190/193 (98.45%), Postives = 192/193 (99.48%), Query Frame = 1


		  
Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60
           MKLVRSSDSM+IPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID
Sbjct: 1   MKLVRSSDSMDIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60

Query: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFL 120
           SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNK IEIRNFL
Sbjct: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKGIEIRNFL 120

Query: 121 GEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180
           GEKRVRKVDMLEGV+ILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG
Sbjct: 121 GEKRVRKVDMLEGVTILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180

Query: 181 IYVSEKGRIVEEE 194
           IYVSEKGRIVEEE
Sbjct: 181 IYVSEKGRIVEEE 193

[Close]

BLAST of Spo00211.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FKL0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g050740 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 1.100e-92
Identity = 175/193 (90.67%), Postives = 186/193 (96.37%), Query Frame = 1


		  
Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60
           MK V SSD MEIPEGI++KVDAKIIVVSGPRGTL+RNFKHLNLDF++ T+E+GKK L ID
Sbjct: 1   MKQVLSSDFMEIPEGIELKVDAKIIVVSGPRGTLTRNFKHLNLDFQITTNEDGKKILKID 60

Query: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFL 120
           SWFGTRKTSA+IRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITN+NKSIEIRNFL
Sbjct: 61  SWFGTRKTSAAIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNTNKSIEIRNFL 120

Query: 121 GEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180
           GEKRVRKVDML+GVSILRSEKVKDELVLDG+DIELVSRSAALINQKCHVKNKDIRKFLDG
Sbjct: 121 GEKRVRKVDMLDGVSILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDG 180

Query: 181 IYVSEKGRIVEEE 194
           IYVSEKGRI EEE
Sbjct: 181 IYVSEKGRIAEEE 193

[Close]

BLAST of Spo00211.1 vs. UniProtKB/TrEMBL
Match: E5GBD5_CUCME (60S ribosomal protein l9 OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 4.000e-87
Identity = 163/194 (84.02%), Postives = 183/194 (94.33%), Query Frame = 1


		  
Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEE-GKKKLNI 60
           MK + SS++M+IP+G+ IKV+AKII V GPRG L RNFKHLNLDF+L+TDE+ GKKKL I
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60

Query: 61  DSWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNF 120
           D+WFG+RKTSA+IRTA+SH+ENLITGVTKGYRYKMR VYAHFPINASITNSNKSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120

Query: 121 LGEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEK+VRKVDML+GVSI+RSEKVKDELVLDG+DIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGRIVEEE 194
           GIYVSEKG +VEEE
Sbjct: 181 GIYVSEKGTVVEEE 194

[Close]

BLAST of Spo00211.1 vs. UniProtKB/TrEMBL
Match: A9P941_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s45810g PE=2 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 5.200e-87
Identity = 160/193 (82.90%), Postives = 180/193 (93.26%), Query Frame = 1


		  
Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60
           MK + SS++M+IP+G+ IK+ A+II V GPRG LSRNFKHLNLDF+L+ DEEGK+KL ID
Sbjct: 1   MKTILSSETMDIPDGVKIKISARIIEVEGPRGKLSRNFKHLNLDFQLIKDEEGKRKLKID 60

Query: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFL 120
           +WF TRKTSA+IRTA+SH+ENLITGVTKGYRYKMR VYAHFPINASITNSN +IEIRNFL
Sbjct: 61  AWFATRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFL 120

Query: 121 GEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180
           GEK+VRKVDML+GVSILRSEKVKDELVLDG+DIELVSRSAALINQKCHVKNKDIRKFLDG
Sbjct: 121 GEKKVRKVDMLDGVSILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDG 180

Query: 181 IYVSEKGRIVEEE 194
           IYVSEKG +VEEE
Sbjct: 181 IYVSEKGTVVEEE 193

[Close]

BLAST of Spo00211.1 vs. UniProtKB/TrEMBL
Match: B9GJJ8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s45820g PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 6.900e-87
Identity = 159/193 (82.38%), Postives = 180/193 (93.26%), Query Frame = 1


		  
Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60
           MK + SS++M+IP+G+ IK+ A+II V GPRG LSRNFKHLNLDF+L+ DEEGK+KL ID
Sbjct: 1   MKTILSSETMDIPDGVKIKISARIIEVEGPRGKLSRNFKHLNLDFQLIKDEEGKRKLKID 60

Query: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFL 120
           +WF TRKTSA+IRTA+SH+ENLITGVTKGYRYKMR VYAHFPINASITNSN +IEIRNFL
Sbjct: 61  AWFATRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFL 120

Query: 121 GEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180
           GEK+VRKVDML+GVSILRSEKVKDEL+LDG+DIELVSRSAALINQKCHVKNKDIRKFLDG
Sbjct: 121 GEKKVRKVDMLDGVSILRSEKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDG 180

Query: 181 IYVSEKGRIVEEE 194
           IYVSEKG +VEEE
Sbjct: 181 IYVSEKGTVVEEE 193

[Close]

BLAST of Spo00211.1 vs. ExPASy Swiss-Prot
Match: RL9_PEA (60S ribosomal protein L9 OS=Pisum sativum GN=RPL9 PE=2 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 7.000e-85
Identity = 153/193 (79.27%), Postives = 176/193 (91.19%), Query Frame = 1


		  
Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60
           MK + SS++M IP+G+ IKV+AK+I V GPRG L R+FKHLNLDF+L+TDE GKKKL ID
Sbjct: 1   MKTILSSETMNIPDGVTIKVNAKVIEVEGPRGKLVRDFKHLNLDFDLITDENGKKKLKID 60

Query: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFL 120
           +WFG+RKTSA+IRTA+SH+ENLITGVTKG+RYKMR VYA FPINASITN NKSIEIRNFL
Sbjct: 61  AWFGSRKTSAAIRTALSHVENLITGVTKGFRYKMRFVYADFPINASITNDNKSIEIRNFL 120

Query: 121 GEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180
           GEK+VRKVD+L+GVSI+RSEKVKDE+VLDG+DIELVSRS ALINQKCHVK KDIRKFLDG
Sbjct: 121 GEKKVRKVDLLDGVSIIRSEKVKDEVVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDG 180

Query: 181 IYVSEKGRIVEEE 194
           IYVSEKG +V EE
Sbjct: 181 IYVSEKGAVVVEE 193

[Close]

BLAST of Spo00211.1 vs. ExPASy Swiss-Prot
Match: RL9_ORYSJ (60S ribosomal protein L9 OS=Oryza sativa subsp. japonica GN=RPL9 PE=2 SV=3)

HSP 1 Score: 308.1 bits (788), Expect = 6.600e-83
Identity = 150/192 (78.12%), Postives = 175/192 (91.15%), Query Frame = 1


		  
Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60
           MK + +S++MEIPEG+ ++V AK++ V GPRG L+RNFKHLNLDF+L+   EG +KL +D
Sbjct: 1   MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLL---EGGRKLQVD 60

Query: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFL 120
           +WFGTR+T A+IRTAISH++NLITGVTKGYRYKMR VYAHFPINASITNSN +IEIRNFL
Sbjct: 61  AWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFL 120

Query: 121 GEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180
           GEK+VRKVDMLEGV+ILRSEKVKDELVLDG+DIELVSRSAALINQKCHVKNKDIRKFLDG
Sbjct: 121 GEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDG 180

Query: 181 IYVSEKGRIVEE 193
           IYVS+KG I E+
Sbjct: 181 IYVSDKGTITED 189

[Close]

BLAST of Spo00211.1 vs. ExPASy Swiss-Prot
Match: RL91_ARATH (60S ribosomal protein L9-1 OS=Arabidopsis thaliana GN=RPL9B PE=1 SV=3)

HSP 1 Score: 301.6 bits (771), Expect = 6.200e-81
Identity = 149/194 (76.80%), Postives = 173/194 (89.18%), Query Frame = 1


		  
Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEE-GKKKLNI 60
           MK + SS++M+IP+ + IKV AK+I V GPRG L R+FKHLNLDF+L+ D E GKKKL I
Sbjct: 1   MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60

Query: 61  DSWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNF 120
           DSWFGTRKTSASIRTA+SH++NLI+GVT+G+RYKMR VYAHFPINASI    KSIEIRNF
Sbjct: 61  DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120

Query: 121 LGEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEK+VRKV+ML+GV+I+RSEKVKDE+VLDG+DIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGRIVEEE 194
           GIYVSEK +IVEEE
Sbjct: 181 GIYVSEKSKIVEEE 194

[Close]

BLAST of Spo00211.1 vs. ExPASy Swiss-Prot
Match: RL92_ARATH (60S ribosomal protein L9-2 OS=Arabidopsis thaliana GN=RPL9D PE=2 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 9.900e-79
Identity = 142/194 (73.20%), Postives = 174/194 (89.69%), Query Frame = 1


		  
Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDE-EGKKKLNI 60
           MK + SS++M+IP+G+ IKV+AK+I V GPRG L+R+FKHLNLDF+L+ D+  GK++L I
Sbjct: 1   MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKI 60

Query: 61  DSWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNF 120
           DSWFG+RKTSASIRTA+SH++NLI GVT+G+ Y+MR VYAHFPINASI  +NKSIEIRNF
Sbjct: 61  DSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNF 120

Query: 121 LGEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEK+VRKV+ML+GV I+RSEKVKDE++L+G+DIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGRIVEEE 194
           GIYVSEKG+I  EE
Sbjct: 181 GIYVSEKGKIAVEE 194

[Close]

BLAST of Spo00211.1 vs. ExPASy Swiss-Prot
Match: RL9_BOVIN (60S ribosomal protein L9 OS=Bos taurus GN=RPL9 PE=2 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.200e-55
Identity = 105/193 (54.40%), Postives = 142/193 (73.58%), Query Frame = 1


		  
Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEEGKKKLNID 60
           MK + S+ +++IPE +DI +  + ++V GPRGTL R+F H+N++  L+  +  KK+L +D
Sbjct: 1   MKTILSNQTVDIPENVDINLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK--KKRLRVD 60

Query: 61  SWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNFL 120
            W+G RK  A++RT  SH++N+I GVT G+RYKMR VYAHFPIN  I  +   +EIRNFL
Sbjct: 61  KWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFL 120

Query: 121 GEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLDG 180
           GEK +R+V M  GV+   S+  KDEL+L+G+DIELVS SAALI Q   VKNKDIRKFLDG
Sbjct: 121 GEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDG 180

Query: 181 IYVSEKGRIVEEE 194
           IYVSEKG + + +
Sbjct: 181 IYVSEKGTVQQAD 191

[Close]

BLAST of Spo00211.1 vs. TAIR (Arabidopsis)
Match: AT1G33120.1 (Ribosomal protein L6 family)

HSP 1 Score: 301.6 bits (771), Expect = 3.500e-82
Identity = 149/194 (76.80%), Postives = 173/194 (89.18%), Query Frame = 1


		  
Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEE-GKKKLNI 60
           MK + SS++M+IP+ + IKV AK+I V GPRG L R+FKHLNLDF+L+ D E GKKKL I
Sbjct: 1   MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60

Query: 61  DSWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNF 120
           DSWFGTRKTSASIRTA+SH++NLI+GVT+G+RYKMR VYAHFPINASI    KSIEIRNF
Sbjct: 61  DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120

Query: 121 LGEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEK+VRKV+ML+GV+I+RSEKVKDE+VLDG+DIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGRIVEEE 194
           GIYVSEK +IVEEE
Sbjct: 181 GIYVSEKSKIVEEE 194

[Close]

BLAST of Spo00211.1 vs. TAIR (Arabidopsis)
Match: AT1G33140.1 (Ribosomal protein L6 family)

HSP 1 Score: 301.6 bits (771), Expect = 3.500e-82
Identity = 149/194 (76.80%), Postives = 173/194 (89.18%), Query Frame = 1


		  
Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDEE-GKKKLNI 60
           MK + SS++M+IP+ + IKV AK+I V GPRG L R+FKHLNLDF+L+ D E GKKKL I
Sbjct: 1   MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60

Query: 61  DSWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNF 120
           DSWFGTRKTSASIRTA+SH++NLI+GVT+G+RYKMR VYAHFPINASI    KSIEIRNF
Sbjct: 61  DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120

Query: 121 LGEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEK+VRKV+ML+GV+I+RSEKVKDE+VLDG+DIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGRIVEEE 194
           GIYVSEK +IVEEE
Sbjct: 181 GIYVSEKSKIVEEE 194

[Close]

BLAST of Spo00211.1 vs. TAIR (Arabidopsis)
Match: AT4G10450.1 (Ribosomal protein L6 family)

HSP 1 Score: 294.3 bits (752), Expect = 5.600e-80
Identity = 142/194 (73.20%), Postives = 174/194 (89.69%), Query Frame = 1


		  
Query: 1   MKLVRSSDSMEIPEGIDIKVDAKIIVVSGPRGTLSRNFKHLNLDFELVTDE-EGKKKLNI 60
           MK + SS++M+IP+G+ IKV+AK+I V GPRG L+R+FKHLNLDF+L+ D+  GK++L I
Sbjct: 1   MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKI 60

Query: 61  DSWFGTRKTSASIRTAISHIENLITGVTKGYRYKMRMVYAHFPINASITNSNKSIEIRNF 120
           DSWFG+RKTSASIRTA+SH++NLI GVT+G+ Y+MR VYAHFPINASI  +NKSIEIRNF
Sbjct: 61  DSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNF 120

Query: 121 LGEKRVRKVDMLEGVSILRSEKVKDELVLDGSDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEK+VRKV+ML+GV I+RSEKVKDE++L+G+DIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGRIVEEE 194
           GIYVSEKG+I  EE
Sbjct: 181 GIYVSEKGKIAVEE 194

The following BLAST results are available for this feature:

BLAST of Spo00211.1 vs. NCBI nr
BLAST of Spo00211.1 vs. UniProtKB/TrEMBL
BLAST of Spo00211.1 vs. ExPASy Swiss-Prot
BLAST of Spo00211.1 vs. TAIR (Arabidopsis)

BLAST of Spo00211.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902211000\|gb\|KNA16589.1\|	4.5e-100	98.4	hypothetical protein SOVF_0878...	[more]
gi\|731321334\|ref\|XP_010671296.1\|	1.6e-92	90.6	PREDICTED: 60S ribosomal prote...	[more]
gi\|743887138\|ref\|XP_011038051.1\|	1.5e-87	83.4	PREDICTED: 60S ribosomal prote...	[more]
gi\|743887136\|ref\|XP_011038050.1\|	2.0e-87	82.9	PREDICTED: 60S ribosomal prote...	[more]
gi\|743887132\|ref\|XP_011038049.1\|	3.4e-87	82.9	PREDICTED: 60S ribosomal prote...	[more]

BLAST of Spo00211.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RC61_SPIOL	3.2e-100	98.4	Uncharacterized protein OS=Spi...	[more]
A0A0J8FKL0_BETVU	1.1e-92	90.6	Uncharacterized protein OS=Bet...	[more]
E5GBD5_CUCME	4.0e-87	84.0	60S ribosomal protein l9 OS=Cu...	[more]
A9P941_POPTR	5.2e-87	82.9	Uncharacterized protein OS=Pop...	[more]
B9GJJ8_POPTR	6.9e-87	82.3	Uncharacterized protein OS=Pop...	[more]

BLAST of Spo00211.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
RL9_PEA	7.0e-85	79.2	60S ribosomal protein L9 OS=Pi...	[more]
RL9_ORYSJ	6.6e-83	78.1	60S ribosomal protein L9 OS=Or...	[more]
RL91_ARATH	6.2e-81	76.8	60S ribosomal protein L9-1 OS=...	[more]
RL92_ARATH	9.9e-79	73.2	60S ribosomal protein L9-2 OS=...	[more]
RL9_BOVIN	1.2e-55	54.4	60S ribosomal protein L9 OS=Bo...	[more]

BLAST of Spo00211.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT1G33120.1	3.5e-82	76.8	Ribosomal protein L6 family	[more]
AT1G33140.1	3.5e-82	76.8	Ribosomal protein L6 family	[more]
AT4G10450.1	5.6e-80	73.2	Ribosomal protein L6 family	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000702	Ribosomal protein L6	PIR	PIRSF002162	RPL6p_RPL6a_RPL9e_RPL9o	coord: 1..189 score: 1.3
IPR000702	Ribosomal protein L6	PANTHER	PTHR11655	60S/50S RIBOSOMAL PROTEIN L6/L9	coord: 1..193 score: 4.3E
IPR002359	Ribosomal protein L6, conserved site-2	PROSITE	PS00700	RIBOSOMAL_L6_2	coord: 165..186 scor
IPR020040	Ribosomal protein L6, alpha-beta domain	GENE3D	3.90.930.12		coord: 8..89 score: 5.2E-25coord: 90..191 score: 2.2
IPR020040	Ribosomal protein L6, alpha-beta domain	PFAM	PF00347	Ribosomal_L6	coord: 101..180 score: 7.8E-11coord: 12..89 score: 1.3
IPR020040	Ribosomal protein L6, alpha-beta domain	unknown	SSF56053	Ribosomal protein L6	coord: 6..89 score: 1.73E-18coord: 90..186 score: 1.76
None	No IPR available	PANTHER	PTHR11655:SF18	SUBFAMILY NOT NAMED	coord: 1..193 score: 4.3E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome