Spo00346.1 (mRNA) | SpinachBase

Overview


Name	Spo00346.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	RNA-binding protein 24
Location	SpoScf_03434 : 5952 .. 14428 (+)
Sequence length	2140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTACTTTTCTCTGTATATCCTGTAAATTTCGAACTCATTTCTTCGCCAACTTCTCGTTATGATCTTCGTCTCCAATTCTCTCTCTTTTGACTTTGTTTGACTCCATTTTTAGGGTTTTCTTTATTCTCCCCCTGTCCCATCTCTTCTTAAGAAGAAGTATTATTCTTTTTTCTCTTTAATAATTCAAATTTCTCCTTTTTCTGTCTCCTCTAATTATTAAAAGTCGTCTACTTTTTATCAATAAAGGTTTTTGATTTTGATTTTGATTTTGATTCATCCTCTTAAAAATCCACCTTATGCTCTGATTGGTCGATTTCTAGGGTTTTTCTAGGGTTTTGTTGTTGTTGTTCTTCTTCTTATATACTGCTGTCTTCCTTCATTTTTCAACCTTTAATTTCTCTCTTTTTTTTAATTTTAATTAAAAAAACTGTATTATTTGGGTGAAAGTTCTCTAAATTGGGTTTGTTCTGGTGATCAATCAATTGAATTGATGGCGTATCAGCCGAGTCCGGGTCGACCCGGATCGGGATCTAGCTCGGGTTCGGGGTTTCCGTATTTGAATTCGCCGTTCGGAGACACCACCTATACCAAGGTGTTTGTTGGAGGTCTGGCTTGGGAGACTCAAAGCGAGACGATGCGGCGGTATTTCGAGCATTTTGGTGAGATTCTTGAGGCTGTTGTTATCACTGATAAGAATACTGGTCGCTCCAAGGGCTATGGTTTTGTGAGTAATTTTCTCTCTTTATTATTTATTATGGAGGTATAAATGTGTTATGTTTTGAGATAATTATTCATAAGTGAGTTTAGTCAAATGTGGCCTATTAAAGTGAGACGAGTAGTATAAATTATTATTAATGATATGATATTCTGATGTTCAATGCTGCTATGCTTGTGAAGTGACTGTGCTTGTGTTTTTGTGTGCTTGCTTTGGAGGGTTTAGGTGACTTTTCGGGATCCTGAATCTGCAAGGAGAGCTTGTGCTGATCCAACACCAATAATTGATGGACGGCGTGCTAATTGTAATTTAGCTTCACTCGGACGACCTCGGCCTGCTCTTTCGTTTGGTATATAGTCTTAATTTAGAGTTCAACTTTAGTAGTTTGTCTTGTTTGTGTCATGTGTTGGTTAAAGAATAGTTCATTGTTTGTTTCTAGATTATGGTAAGTGTTATTATAAGCTTACTCCTATCAGTTAAATTTTGATTGACATGCAAAATTTTGTGAATTAAGCTTCTCTGCACCATAAAAGTCATTTATTGGTGGTGTCTTCTATTCAACTGGGATATATCTTTGTATAGGGTGGTTTTTGAGGTATGAGATATTTTTTGCTGCGGTGTTCAATTTTTTTTAGTAGTTTGCATGTTGAACCATCATCAATTAGCAAGGTCTCAAAGAGGTAGACTGGTGAGTGCTGAAGTTGTTAGTGTTGATGTCAATAATTGCTTTAACGAATGAATTTTTGTCCTGCAAAAGATGTTTAACAAATTTAGCCTATGTGTAGGATGGGGTTCAAGGATATTGATTATTTACATCATTTATTTTTAGCATTGTAAGTGAGTTTTGGCGAGCAAGTAACTTTTAATAAATGATTTTGGATGAACTTATCTTTTCATTTTTTAAGTTATGGTGATTCTTAACCAATAGGTTTACTGACTAGAGTGTATAAGAGCATTTCTGAGTTCTAAAGAAATGCTTCTTAGTTTGGTTATTTAACAACAATGTGTTTGTTGAGGGCTGTCGAATTTCGGAGGCTACTTTAGTTGCAAACTAGGTGGTGGAAGATGTTTGGAGGAGGGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGAGAGAAGGGGGTATTTATTTAAGTTGGATTTAGACAAAGCATATGACTTGGTATATTGGAGGTTTCAAGATAAAATACTGGTGCGTAAGGGTTTTGATTGGTCACTGGTGACAACATGGTTTAGGTCCCTTTTAGGCTGCCTTTCTACTTCTTATTGGAGACTTGGGGTTGGGATTTATACTGGTGGTCGATTTTGACAAATAGGAGGTGGGTGGTTGTTTCCTGTTAGAAATTTTCAGGTGATTTTATTCTCAGTCTTGATCTTTTTGGCAATAATTTAAGTTCAAGAATGTGCTTACTAATAAGCCATGTATTTTACATCTCGATTTGGATTCTTTAACTTTGTATACGGTTGTTGTTTTTTAGGCGCATTGCACATTACACACAGTGGGTGCCTATATGTGCTAATTTTAGGCGTCTTTTCTTTTTGGAATGCTGTAGTTGATAAAGTATCTAAGAGGTTGTAAAACCTCGCCGATTTGGGGTAGCAATTTGAGTTTTCTTTTGGAAATTTCCCTTGGCATCGGTTGATTAGGAGTGGGTTTAATCTTAACAGGAGTTATTGACATACTTCTGCCAAGAATGAAGTTCTCTGTCCATACCCGTGGAAGTTTATTTCAAAGGTTTCATCTTTGTTCTTTCCTTGGTTGAGTTTCATGTGGGTAATCTACTGTGGGGTTTTGGGAGGATTCTTGTGCAGGAAAGCGCCTTTTTCCTTTACTTTCTTTTTTTTTTTTTAAAAAGAAATTATTTGTCCGTCTTTTACCACTCCAATGTCTCACTTTTTGGTTTGAGAGGCTGTTCATCACGTAGCCTCCATTTTTTAAGTAATATCAGGATAGCAATTAGGTAACGTGGCCTTTCTTTTAAGGATCCAATGCATTTTTGATAAGATTAATTCTTGATTTTAGAGCTTGCGTGTTGATTCTTCGGGTTATTTTTCCGCAAATCTTTCTTCAAACTTGCTCCAATTCTCAATTCTCCCTTTTCCCAACATTTATTTGGACGGTGAACATTCCTATGAAGGTTAAGGAATTTGTTGAACAATTTTGGAAACACTTGCTGATTATCCTGTGCAGCATTCAGATGAAGCTTTGTCACCCAGTGTTTGTTTTATCTATTATAAAGGTGCCGAATCGGGTTCTTGTTTCTATCTTCACTGAGAGGTGGCTGATGCTTTATGGTCTAATTTCTATTTTGAAGGGGCATTTTGGTTATGCTCTGTTTTCCGATGTGCCATATGCAGGTGAATTTGCTTGGTTTTGGGAGGGAATACAACAAAAGGTACTTTTGAGGTGTTCTTTTATGGAATTGATTTGGGTGCTTTTATTGGAGCCTAATGACTTTTTTCTGTAATACGGCTCATGTGGAAGTGTTACGTTATTTTAAAAACTACCTTCATAAATTTGTCATTGTATAGGTTTGACAACAAAGTCCTGTGAAATGGGCAAAGTTCATATTTTTCTGCTTCCATGGCAAGCAATTGGATACTTCTGTGCGCACATTTTCTTTGTTTAATGTTATGTGAGTACTATGCTGTGTATGTTTGAGGGGGTTGGTGTTCTATTTGTGATACATACCATATTTTTTTTATTTGTATCTAATCTTGTTTTATGGTTGATTGGCCTTATGGAAACATCTGATAGGACGTTTGAGGTCGCCTAGCCCCTATATTGGAAATCCACGTGCTTCAATGGGAGGTGTTGGCTATCAGCAGCCCGTTCCGTACAACTACCAACAAGGATATGTATACTCTATGTATGGGTGGGTTATTGCTGGTGTATATATGGCCTATTTAAGCAGTGCTTTTTTCATGTTTATCTGTAGTATTGGTCATAAAAGAAGATGCATGTAGTAGACTTGTTGTATGTTGATAATTCTGGGCTGCAATATTTGGATTGGAAGAAGTTTGTTTTGTTTATGTATGCTTTCCTATGTTTCAGGTGCTTGTGTATCTGCACGTCTAGTTATTCTTTTGTTTTTTTCCCCCGGTCCTTTCTCGATACATATGTATGCATAATGTGTTCCATGGTTTTGAAATACTTGGATGCTTCTTTGCTGAAACTTGTGACTTTCTGGTCCTGGATTCCTGATGCTGTGTTATGGACTTAATAACTTAATATGATTTCATCAGTACTTGCAGGCGTGTCAAATTTGCACCAGGATTAAGGCCTAAATGTATTACATAACAGTAAATATCAGACTTAGCCCCCAACATCGCCTCCCGTATATTACAATAGGAGAATGTCCACCCAAAATTTACAGTTAGCATCTAGAAAGGGCAGCTTTAATCCTTCCTTGTCTCCTCTGTTTAATTGTTAAATGAGAACTCTTCTTAATGTTAGTGATGATTTCTTTGAGGAAATTCTTAGCTACTTAGTGGCTTAGGTATTGATGTACGCTTAACCCTTATTCTGCAGTGGCTGGGGGTCCAATTGGATGTCGGTGCCTATTTTTATTTCTCTTGTTCTTTCTACAATCATTTAATTTTGGAGGATATCTTTGTGACTTTGTGTTCATTTAACTGTACAGGTTTCAGCCATATGGGCCTGAATATCCATACACACAGGTAATCAGCTTTACAGGATGCCTCAGAATAAGATTTTCGGCGAGAGTTTCTTTATAGTTAATGTTTTGTCTAGTCCTTAGTCCTCACTCCAAGTTGCTTTATACAGGGGCTTTACAACCCTTACATGGGTCAGCAGTACCTTCAGCTGTATGGAGTTCCTGGAACACCAGGTGGACCCATGTATCCTTATGGACAACTGGGCCAGTCAGTTCAAGGAGGTGGTTATACACCAATACAGAATTATCCAATGCCAAGCCACCAGATTGTGCAACTTGGTGGTCCTGGTGTTAACGCTATGACAACGGCTTCTATTCCCAGCATTCAGTCACCGTATCATCCAGGCAATTTTCTCCCCGTTAAAAGTAAATTCTTTGTTTTTACTGAACGTGTTTCCTCTGTCTTTCAAACTATTTGTGCTAGCACTGTATGGCTTTGGGTTCTGGATTCTTGGAATTGTTTTAGTGATTATAGGATTCTGATTCCCGTAACATTGTCAGGGCAGTTGGTTGTACTTAAGTCTAGCGTTATGTGATGAAAATATGTTTGCAATTTTGTTTGCATTTAACATAGCAGAAGTATCTTCGTTAGACCTCGACTTTTTAAATATAGTTCTATGGCTTAAAATTTGTGTTCACGGTTGACCAAGTCTGCTAAGAGTTGAGTCCGTGCTAGTCAAATAATCTAAGAGGGTTAAAATTGCAGCTTGGAATAATTTTGGCTGAGGCTTTTCATGCTGAGCCAGTTCTGTTAGATTTGAGTATGAGGTGGGTAAAATATGTGCTGCTTTTATAATATATTTTGCTTTTTGAAACATTGGCTGATTGATCTCATAAGACTTAGAGTAACTGAATTTTGTAACTACTGGTGGTTGGTACTTGTTGTATTATCTCCTCTCTTGGTTTTGGAGGGAGGTGTTGGTAGGGTGGGATTTTCGTAGCTTCTCCGAGATCCCATTTCCTAAGGTGAGTAAGTTGTATCGTCTCTAGTAAACTGGGTTTTCTCTTGCACGTTGCTGGTTGAAAAATAGAAGAGGTGCAAACAGCATTATGAATTTAGTAGTTTGGTATTATCATTTTATTTTCCCCCCTCTTCAAGGCCAGTTAAATGATATATATTTTTGCACAAATTCAACACCTGTTTGTTGACTCTGTTAACACAATATTTTTCTTGATTATGTGGTCAAATTGGAAGCCAGTTTGTTGAGTGTCCTAGTGGGTAAGCATGGTAGAGTAAGTTGACTAGTTAAAAAAACTATGCTGGTTATTGGTGGCTATAACATTTAGTCTAGTGCATGGATTTCTGGAAAATATTTTACCGTGTGCAGAGTTAGAGAGAATAGTCATTACTATAAGAATGCTTGCTTTTTCAGGTGTAGTTTCCCCAGTTCCTGGACAACCTCAATTTATGATCCACGGACATTCTCCTCAGTTCATTCAAGGTGGCAGCTCTGACCAAGCAACTGGGTGAGAAGACTGATTCAGGCGAGAATTGTGGTCAATTATTCATGCTTGGCAGGTTTTATATCAGATTATATACTCCTTCCGTCCCAAAATATAGTGTCCGTTTGACTAAAAACACGGAAATTAAGGAAAAGGATAGCATTGATAATAAAACAATAATTATTTGTATTTTCAAGATAAAGCATATTTTTTAGGTGGCTTTTATGGAGGGAGAAATTAGAGATTAAAGGTGTTTACATAATAAATGGGCCTCAAAAAGACAAAAATCAAGCACATGGGTTGAATAAAAGTCAGAAAATACAATTTTCAAAGTAAAAATTCTAACTTTTTTAGGACAATATTGGAATTACAATTAGTGCATGAGGGTATTATGGGTAAAAATTAATGGTTTGAAATAGAAATAGGCGCATCATTTAGGGACACCATTTTAGGACAACAGGCGCTATATTTTGGGACGGAGGGAGTTGTAAAATTTGCAAATTACTACCTAGCTTGTTAAAAGTTGTCAACTACTACCCAGGTGTTTAGTTATTGTTGTCAATACCTTAGCTCATATTCCGGCCAATTAGTCAACCGTTAATCATACTTTAATTGGCCGAAATATGAGCTAAGTTAGTAATTGACAACCATAACTAAACACCTATGTAGTAATTCACACTTTTAACAAGTTAGGTAGTAATTTGCAAAGTCACTAAAGACCTAGGTAGTAATTTGCAAATCTTCCGATTATATATTGATTAGACTTGCTTGTTGTGTCTACAGTTATCCTTAGTTTGCAGTGGGACCAAGGCAACAGTTCTGCTACTTGAGTGGCGGGCTTCAAATTTAGCCTTGCAATTTATCATTTTGCATTCTAGAGGTACACTTTTATGCATTCAAATTATGTTATCTTTGATTTAAAAGCAAGTCTTTGCCAAGGCGTGAGATGCAGTGACGTGTCCTCGTCAATCCGTTATTGCCTTGAGCAAACTTGCACAGTAATAGGCCATTTTTGCATAAAATAAAATAAAGAACAAGTATTTCCTAAGCTTTTTGTAAAAGAGTGCATTGTGTCTCAATGTTGAGATTTGAAGACCTTTTGATGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCGGACTCGGCCCTGCCCTCTTGTTTTTCTGAACTGCCTCCGGTTTCACTCATCTTTTAATTATACATGGGCAAAGAGGTACTTTTAATCTTTGAATTTACTTTGTAGTTGAATACTTTTGTTACCAACGTTGCAGGTAAAACATAGTCTTGGTCATCAGAGAAGTCAAGTTTCTAATTCGCTCTACAGCGGAGAGGAATTATGGAAGACAACGGTTTGTTCTTCCTGTATCATTCATTGATGCATCTTAAAACCTTACATTGTGGTCAGTGCTATCCTCAACAAGAACAAGCTGCCCACATAATGCATTTAAGTTGCTGGAAAAGGTATCCAGTGGCCGTGTAAAAATAAAAAAGTATCATGTACAAAAAGTACGAATCCATCTTAGAATCAACATATGATTCTTGTGTAGTATTATAGTCTAGTCGCTCCCGGCCAATCAATCTGGGTTGTATAGAATATCTCTGATGGTCAGTTCATTTACAGGCATGCATGCATCTAGTGTCATCTGTAGGTATCATCCACGTCCTGTGCATATACTCTAGCTTCTAGCCATTTCATTTTCGGTATAACATCTGTCACATAGTATGTATACATGAATGTATAATGTTGGTAGCCCGATTTCAAAATATGAAAGACGGTGAAGACCATTTTCAATAGTCTCAATTTAAGTAGCAGCTTTGTATCTAAATGTGCAATTTGGCCATTAGGTTCAATTTAGAAATTGTACAAGTGTATTTCGGTCTTCTTTAAACGAATTGCAGAGCAACAGTCGGTTTTGGAGGAGCAAGATTATCTTGCCTTCCACAAGTCAGAATTTCTCCTGCCT

mRNA sequence

TTACTTTTCTCTGTATATCCTGTAAATTTCGAACTCATTTCTTCGCCAACTTCTCGTTATGATCTTCGTCTCCAATTCTCTCTCTTTTGACTTTGTTTGACTCCATTTTTAGGGTTTTCTTTATTCTCCCCCTGTCCCATCTCTTCTTAAGAAGAAGTATTATTCTTTTTTCTCTTTAATAATTCAAATTTCTCCTTTTTCTGTCTCCTCTAATTATTAAAAGTCGTCTACTTTTTATCAATAAAGGTTTTTGATTTTGATTTTGATTTTGATTCATCCTCTTAAAAATCCACCTTATGCTCTGATTGGTCGATTTCTAGGGTTTTTCTAGGGTTTTGTTGTTGTTGTTCTTCTTCTTATATACTGCTGTCTTCCTTCATTTTTCAACCTTTAATTTCTCTCTTTTTTTTAATTTTAATTAAAAAAACTGTATTATTTGGGTGAAAGTTCTCTAAATTGGGTTTGTTCTGGTGATCAATCAATTGAATTGATGGCGTATCAGCCGAGTCCGGGTCGACCCGGATCGGGATCTAGCTCGGGTTCGGGGTTTCCGTATTTGAATTCGCCGTTCGGAGACACCACCTATACCAAGGTGTTTGTTGGAGGTCTGGCTTGGGAGACTCAAAGCGAGACGATGCGGCGGTATTTCGAGCATTTTGGTGAGATTCTTGAGGCTGTTGTTATCACTGATAAGAATACTGGTCGCTCCAAGGGCTATGGTTTTGTGACTTTTCGGGATCCTGAATCTGCAAGGAGAGCTTGTGCTGATCCAACACCAATAATTGATGGACGGCGTGCTAATTGTAATTTAGCTTCACTCGGACGACCTCGGCCTGCTCTTTCGTTTGGACGTTTGAGGTCGCCTAGCCCCTATATTGGAAATCCACGTGCTTCAATGGGAGGTGTTGGCTATCAGCAGCCCGTTCCGTACAACTACCAACAAGGATATGTATACTCTATGTATGGGTTTCAGCCATATGGGCCTGAATATCCATACACACAGGGGCTTTACAACCCTTACATGGGTCAGCAGTACCTTCAGCTGTATGGAGTTCCTGGAACACCAGGTGGACCCATGTATCCTTATGGACAACTGGGCCAGTCAGTTCAAGGAGGTGGTTATACACCAATACAGAATTATCCAATGCCAAGCCACCAGATTGTGCAACTTGGTGGTCCTGGTGTTAACGCTATGACAACGGCTTCTATTCCCAGCATTCAGTCACCGTATCATCCAGGTGTAGTTTCCCCAGTTCCTGGACAACCTCAATTTATGATCCACGGACATTCTCCTCAGTTCATTCAAGGTGGCAGCTCTGACCAAGCAACTGGGTGAGAAGACTGATTCAGTTATCCTTAGTTTGCAGTGGGACCAAGGCAACAGTTCTGCTACTTGAGTGGCGGGCTTCAAATTTAGCCTTGCAATTTATCATTTTGCATTCTAGAGGTAAAACATAGTCTTGGTCATCAGAGAAGTCAAGTTTCTAATTCGCTCTACAGCGGAGAGGAATTATGGAAGACAACGGTTTGTTCTTCCTGTATCATTCATTGATGCATCTTAAAACCTTACATTGTGGTCAGTGCTATCCTCAACAAGAACAAGCTGCCCACATAATGCATTTAAGTTGCTGGAAAAGGTATCCAGTGGCCGTGTAAAAATAAAAAAGTATCATGTACAAAAAGTACGAATCCATCTTAGAATCAACATATGATTCTTGTGTAGTATTATAGTCTAGTCGCTCCCGGCCAATCAATCTGGGTTGTATAGAATATCTCTGATGGTCAGTTCATTTACAGGCATGCATGCATCTAGTGTCATCTGTAGGTATCATCCACGTCCTGTGCATATACTCTAGCTTCTAGCCATTTCATTTTCGGTATAACATCTGTCACATAGTATGTATACATGAATGTATAATGTTGGTAGCCCGATTTCAAAATATGAAAGACGGTGAAGACCATTTTCAATAGTCTCAATTTAAGTAGCAGCTTTGTATCTAAATGTGCAATTTGGCCATTAGGTTCAATTTAGAAATTGTACAAGTGTATTTCGGTCTTCTTTAAACGAATTGCAGAGCAACAGTCGGTTTTGGAGGAGCAAGATTATCTTGCCTTCCACAAGTCAGAATTTCTCCTGCCT

Coding sequence (CDS)

ATGGCGTATCAGCCGAGTCCGGGTCGACCCGGATCGGGATCTAGCTCGGGTTCGGGGTTTCCGTATTTGAATTCGCCGTTCGGAGACACCACCTATACCAAGGTGTTTGTTGGAGGTCTGGCTTGGGAGACTCAAAGCGAGACGATGCGGCGGTATTTCGAGCATTTTGGTGAGATTCTTGAGGCTGTTGTTATCACTGATAAGAATACTGGTCGCTCCAAGGGCTATGGTTTTGTGACTTTTCGGGATCCTGAATCTGCAAGGAGAGCTTGTGCTGATCCAACACCAATAATTGATGGACGGCGTGCTAATTGTAATTTAGCTTCACTCGGACGACCTCGGCCTGCTCTTTCGTTTGGACGTTTGAGGTCGCCTAGCCCCTATATTGGAAATCCACGTGCTTCAATGGGAGGTGTTGGCTATCAGCAGCCCGTTCCGTACAACTACCAACAAGGATATGTATACTCTATGTATGGGTTTCAGCCATATGGGCCTGAATATCCATACACACAGGGGCTTTACAACCCTTACATGGGTCAGCAGTACCTTCAGCTGTATGGAGTTCCTGGAACACCAGGTGGACCCATGTATCCTTATGGACAACTGGGCCAGTCAGTTCAAGGAGGTGGTTATACACCAATACAGAATTATCCAATGCCAAGCCACCAGATTGTGCAACTTGGTGGTCCTGGTGTTAACGCTATGACAACGGCTTCTATTCCCAGCATTCAGTCACCGTATCATCCAGGTGTAGTTTCCCCAGTTCCTGGACAACCTCAATTTATGATCCACGGACATTCTCCTCAGTTCATTCAAGGTGGCAGCTCTGACCAAGCAACTGGGTGA

Protein sequence

MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFGRLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQQYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASIPSIQSPYHPGVVSPVPGQPQFMIHGHSPQFIQGGSSDQATG

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo00346	Spo00346	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo00346.1	Spo00346.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00346.1.exon.1	Spo00346.1.exon.1	exon
Spo00346.1.exon.2	Spo00346.1.exon.2	exon
Spo00346.1.exon.3	Spo00346.1.exon.3	exon
Spo00346.1.exon.4	Spo00346.1.exon.4	exon
Spo00346.1.exon.5	Spo00346.1.exon.5	exon
Spo00346.1.exon.6	Spo00346.1.exon.6	exon
Spo00346.1.exon.7	Spo00346.1.exon.7	exon
Spo00346.1.exon.8	Spo00346.1.exon.8	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00346.1.utr5p.1	Spo00346.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00346.1.CDS.1	Spo00346.1.CDS.1	CDS
Spo00346.1.CDS.2	Spo00346.1.CDS.2	CDS
Spo00346.1.CDS.3	Spo00346.1.CDS.3	CDS
Spo00346.1.CDS.4	Spo00346.1.CDS.4	CDS
Spo00346.1.CDS.5	Spo00346.1.CDS.5	CDS
Spo00346.1.CDS.6	Spo00346.1.CDS.6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00346.1.utr3p.1	Spo00346.1.utr3p.1	three_prime_UTR
Spo00346.1.utr3p.2	Spo00346.1.utr3p.2	three_prime_UTR
Spo00346.1.utr3p.3	Spo00346.1.utr3p.3	three_prime_UTR

Homology

[Close]

BLAST of Spo00346.1 vs. NCBI nr
Match: gi|902176143|gb|KNA08726.1| (hypothetical protein SOVF_160090 isoform C [Spinacia oleracea])

HSP 1 Score: 583.2 bits (1502), Expect = 2.500e-163
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 1


		  
Query: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60
           MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL
Sbjct: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60

Query: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120
           EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG
Sbjct: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120

Query: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180
           RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ
Sbjct: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180

Query: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240
           QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI
Sbjct: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240

Query: 241 PSIQSPYHPGVVSPVPGQPQFMIHGHSPQFIQGGSSDQATG 282
           PSIQSPYHPGVVSPVPGQPQFMIHGHSPQFIQGGSSDQATG
Sbjct: 241 PSIQSPYHPGVVSPVPGQPQFMIHGHSPQFIQGGSSDQATG 281

[Close]

BLAST of Spo00346.1 vs. NCBI nr
Match: gi|902176142|gb|KNA08725.1| (hypothetical protein SOVF_160090 isoform B [Spinacia oleracea])

HSP 1 Score: 576.2 bits (1484), Expect = 3.000e-161
Identity = 281/288 (97.57%), Postives = 281/288 (97.57%), Query Frame = 1


		  
Query: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60
           MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL
Sbjct: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60

Query: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120
           EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG
Sbjct: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120

Query: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180
           RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ
Sbjct: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180

Query: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240
           QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI
Sbjct: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240

Query: 241 PSIQSPYHPG-------VVSPVPGQPQFMIHGHSPQFIQGGSSDQATG 282
           PSIQSPYHPG       VVSPVPGQPQFMIHGHSPQFIQGGSSDQATG
Sbjct: 241 PSIQSPYHPGNFLPVKSVVSPVPGQPQFMIHGHSPQFIQGGSSDQATG 288

[Close]

BLAST of Spo00346.1 vs. NCBI nr
Match: gi|902176141|gb|KNA08724.1| (hypothetical protein SOVF_160090 isoform A [Spinacia oleracea])

HSP 1 Score: 521.9 bits (1343), Expect = 6.800e-145
Identity = 252/255 (98.82%), Postives = 252/255 (98.82%), Query Frame = 1


		  
Query: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60
           MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL
Sbjct: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60

Query: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120
           EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG
Sbjct: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120

Query: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180
           RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ
Sbjct: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180

Query: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240
           QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI
Sbjct: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240

Query: 241 PSIQSPYHPGVVSPV 256
           PSIQSPYHPG   PV
Sbjct: 241 PSIQSPYHPGNFLPV 255

[Close]

BLAST of Spo00346.1 vs. NCBI nr
Match: gi|731314434|ref|XP_010686584.1| (PREDICTED: RNA-binding protein 24 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 519.2 bits (1336), Expect = 4.400e-144
Identity = 250/281 (88.97%), Postives = 261/281 (92.88%), Query Frame = 1


		  
Query: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60
           MAYQP PGRPGSGSSSGSGFPYLNS FGDTTYTKVFVGGLAWETQSETMRRYFE FGEIL
Sbjct: 1   MAYQPVPGRPGSGSSSGSGFPYLNSQFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEIL 60

Query: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120
           EAVVITDKNTGRSKGYGFVTFRDPE+ARRACADPTPIIDGRRANCNLASLGRPRPALSFG
Sbjct: 61  EAVVITDKNTGRSKGYGFVTFRDPEAARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120

Query: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180
           RLRSPSPYIG PRASMGGVGYQQPV YNYQQGYVYSMYG+QPYGP+Y Y QG+YNPY+GQ
Sbjct: 121 RLRSPSPYIGQPRASMGGVGYQQPVSYNYQQGYVYSMYGYQPYGPDYAYAQGVYNPYLGQ 180

Query: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240
           QYLQLYGVPGTPG P+YPYGQ GQS QGGGYTP+QNY MPSHQI+  GGPGVNAMT+  I
Sbjct: 181 QYLQLYGVPGTPGAPVYPYGQFGQSGQGGGYTPMQNYSMPSHQILHFGGPGVNAMTSP-I 240

Query: 241 PSIQSPYHPGVVSPVPGQPQFMIHGHSPQFIQGGSSDQATG 282
           PSIQSPYHPGVVSP+ GQPQFM+ GHSPQFIQGG SDQ  G
Sbjct: 241 PSIQSPYHPGVVSPISGQPQFMVPGHSPQFIQGGGSDQVNG 280

[Close]

BLAST of Spo00346.1 vs. NCBI nr
Match: gi|902176144|gb|KNA08727.1| (hypothetical protein SOVF_160090 isoform D [Spinacia oleracea])

HSP 1 Score: 512.7 bits (1319), Expect = 4.100e-142
Identity = 250/255 (98.04%), Postives = 250/255 (98.04%), Query Frame = 1


		  
Query: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60
           MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL
Sbjct: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60

Query: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120
           EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG
Sbjct: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120

Query: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180
           RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSM  FQPYGPEYPYTQGLYNPYMGQ
Sbjct: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSM--FQPYGPEYPYTQGLYNPYMGQ 180

Query: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240
           QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI
Sbjct: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240

Query: 241 PSIQSPYHPGVVSPV 256
           PSIQSPYHPG   PV
Sbjct: 241 PSIQSPYHPGNFLPV 253

[Close]

BLAST of Spo00346.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QQC6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_160090 PE=4 SV=1)

HSP 1 Score: 583.2 bits (1502), Expect = 1.700e-163
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 1


		  
Query: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60
           MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL
Sbjct: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60

Query: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120
           EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG
Sbjct: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120

Query: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180
           RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ
Sbjct: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180

Query: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240
           QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI
Sbjct: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240

Query: 241 PSIQSPYHPGVVSPVPGQPQFMIHGHSPQFIQGGSSDQATG 282
           PSIQSPYHPGVVSPVPGQPQFMIHGHSPQFIQGGSSDQATG
Sbjct: 241 PSIQSPYHPGVVSPVPGQPQFMIHGHSPQFIQGGSSDQATG 281

[Close]

BLAST of Spo00346.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QNA9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_160090 PE=4 SV=1)

HSP 1 Score: 576.2 bits (1484), Expect = 2.100e-161
Identity = 281/288 (97.57%), Postives = 281/288 (97.57%), Query Frame = 1


		  
Query: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60
           MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL
Sbjct: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60

Query: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120
           EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG
Sbjct: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120

Query: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180
           RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ
Sbjct: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180

Query: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240
           QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI
Sbjct: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240

Query: 241 PSIQSPYHPG-------VVSPVPGQPQFMIHGHSPQFIQGGSSDQATG 282
           PSIQSPYHPG       VVSPVPGQPQFMIHGHSPQFIQGGSSDQATG
Sbjct: 241 PSIQSPYHPGNFLPVKSVVSPVPGQPQFMIHGHSPQFIQGGSSDQATG 288

[Close]

BLAST of Spo00346.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QN92_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_160090 PE=4 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 4.700e-145
Identity = 252/255 (98.82%), Postives = 252/255 (98.82%), Query Frame = 1


		  
Query: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60
           MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL
Sbjct: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60

Query: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120
           EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG
Sbjct: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120

Query: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180
           RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ
Sbjct: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180

Query: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240
           QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI
Sbjct: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240

Query: 241 PSIQSPYHPGVVSPV 256
           PSIQSPYHPG   PV
Sbjct: 241 PSIQSPYHPGNFLPV 255

[Close]

BLAST of Spo00346.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CZF1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g013920 PE=4 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 3.100e-144
Identity = 250/281 (88.97%), Postives = 261/281 (92.88%), Query Frame = 1


		  
Query: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60
           MAYQP PGRPGSGSSSGSGFPYLNS FGDTTYTKVFVGGLAWETQSETMRRYFE FGEIL
Sbjct: 1   MAYQPVPGRPGSGSSSGSGFPYLNSQFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEIL 60

Query: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120
           EAVVITDKNTGRSKGYGFVTFRDPE+ARRACADPTPIIDGRRANCNLASLGRPRPALSFG
Sbjct: 61  EAVVITDKNTGRSKGYGFVTFRDPEAARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120

Query: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180
           RLRSPSPYIG PRASMGGVGYQQPV YNYQQGYVYSMYG+QPYGP+Y Y QG+YNPY+GQ
Sbjct: 121 RLRSPSPYIGQPRASMGGVGYQQPVSYNYQQGYVYSMYGYQPYGPDYAYAQGVYNPYLGQ 180

Query: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240
           QYLQLYGVPGTPG P+YPYGQ GQS QGGGYTP+QNY MPSHQI+  GGPGVNAMT+  I
Sbjct: 181 QYLQLYGVPGTPGAPVYPYGQFGQSGQGGGYTPMQNYSMPSHQILHFGGPGVNAMTSP-I 240

Query: 241 PSIQSPYHPGVVSPVPGQPQFMIHGHSPQFIQGGSSDQATG 282
           PSIQSPYHPGVVSP+ GQPQFM+ GHSPQFIQGG SDQ  G
Sbjct: 241 PSIQSPYHPGVVSPISGQPQFMVPGHSPQFIQGGGSDQVNG 280

[Close]

BLAST of Spo00346.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QNB0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_160090 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 2.900e-142
Identity = 250/255 (98.04%), Postives = 250/255 (98.04%), Query Frame = 1


		  
Query: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60
           MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL
Sbjct: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60

Query: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120
           EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG
Sbjct: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFG 120

Query: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ 180
           RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSM  FQPYGPEYPYTQGLYNPYMGQ
Sbjct: 121 RLRSPSPYIGNPRASMGGVGYQQPVPYNYQQGYVYSM--FQPYGPEYPYTQGLYNPYMGQ 180

Query: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240
           QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI
Sbjct: 181 QYLQLYGVPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASI 240

Query: 241 PSIQSPYHPGVVSPV 256
           PSIQSPYHPG   PV
Sbjct: 241 PSIQSPYHPGNFLPV 253

[Close]

BLAST of Spo00346.1 vs. ExPASy Swiss-Prot
Match: ARP1_ARATH (Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana GN=ARP1 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.700e-29
Identity = 96/251 (38.25%), Postives = 122/251 (48.61%), Query Frame = 1


		  
Query: 23  LNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEILEAVVITDKNTGRSKGYGFVTFR 82
           +N  FGDT  TKVFVGGLAW+T  E M  +F  +G+ILEAV+I+DK T RSKGYGFVTF+
Sbjct: 7   VNGCFGDTKLTKVFVGGLAWDTHKEAMYDHFIKYGDILEAVIISDKLTRRSKGYGFVTFK 66

Query: 83  DPESARRACADPTPIIDGRRANCNLASLGRPRPALSFGRLRSPSPYIGNPRASMGGVGYQ 142
           D ++A RAC D TPII+GRRANCNLASLG        GRLR         +    G    
Sbjct: 67  DAKAATRACEDSTPIINGRRANCNLASLG--------GRLRKSPTMTSPQQGPKNGNRAT 126

Query: 143 QPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQQYLQLYGVPGTPGGPMYPY--- 202
            P   N+ Q Y  S +  Q +  +              Q +  YG P     P   +   
Sbjct: 127 PPHVGNHSQWYYPSGFTNQQHQQQ------------NHQAVPFYGYPSAYVAPNMTFNQK 186

Query: 203 -GQLGQSVQGGGYTPI----QNYPMPSHQIVQLGGPGVNAMTTASIPSIQ----SPYHPG 262
            G +G +   G Y  +    Q+ P P +    + G G   M  A+ P +      PYH  
Sbjct: 187 VGYVGGTYMNGYYAQMQPQPQSQPQPQYYHHHMYGGG-RVMVGAASPMVPFYTVYPYHQS 235

[Close]

BLAST of Spo00346.1 vs. ExPASy Swiss-Prot
Match: RB24A_XENLA (RNA-binding protein 24-A OS=Xenopus laevis GN=rbm24-a PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.800e-28
Identity = 86/220 (39.09%), Postives = 104/220 (47.27%), Query Frame = 1


		  
Query: 29  DTTYTKVFVGGLAWETQSETMRRYFEHFGEILEAVVITDKNTGRSKGYGFVTFRDPESAR 88
           DTTYTK+FVGGL + T   ++R+YFE FG+I EAVVITD+ TG+S+GYGFVT  D  +A 
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 89  RACADPTPIIDGRRANCNLASLG-RPR---PALSFGRLRSPSPYIGNPRASMGGVGYQQP 148
           RAC DP PIIDGR+AN NLA LG +PR   P  +FG  +     I  P        +  P
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQIHPALIQRP--------FGIP 126

Query: 149 VPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQQYLQLYGVPGTPGGPMYPYGQLGQ 208
             Y Y Q YV          P    +   Y  Y    Y Q            YPY     
Sbjct: 127 AHYVYPQAYVQPGVVIPHVQPTAATSTSPYIDYTSAAYAQYSAAAAAAAYDQYPY---AA 186

Query: 209 SVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASIPSIQ 245
           S    GY     Y     Q +    PG  A   A+    Q
Sbjct: 187 SPAATGYVTAAGYGYAVPQPLTAAAPGSAAAAAAAFGQYQ 215

[Close]

BLAST of Spo00346.1 vs. ExPASy Swiss-Prot
Match: RBM24_HUMAN (RNA-binding protein 24 OS=Homo sapiens GN=RBM24 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.400e-27
Identity = 90/227 (39.65%), Postives = 108/227 (47.58%), Query Frame = 1


		  
Query: 29  DTTYTKVFVGGLAWETQSETMRRYFEHFGEILEAVVITDKNTGRSKGYGFVTFRDPESAR 88
           DTTYTK+FVGGL + T   ++R+YFE FGEI EAVVITD+ TG+S+GYGFVT  D  +A 
Sbjct: 7   DTTYTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 89  RACADPTPIIDGRRANCNLASLG-RPR---PALSFGRLRSPSPYIGNPRASMGGVGYQQP 148
           RAC DP PIIDGR+AN NLA LG +PR   P  +FG  +     I  P        +  P
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRP--------FGIP 126

Query: 149 VPYNYQQGYVYSMYGFQPYGPEYPYTQGL--------YNPYMGQQYLQLYGVPGTPGG-- 208
             Y Y Q +V      QP G   P+ Q          Y  Y G  Y Q            
Sbjct: 127 AHYVYPQAFV------QP-GVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAA 186

Query: 209 --PMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTAS 240
               YPY     S    GY     Y     Q +    PG  A   A+
Sbjct: 187 AYDQYPY---AASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAA 215

[Close]

BLAST of Spo00346.1 vs. ExPASy Swiss-Prot
Match: RBM24_DANRE (RNA-binding protein 24 OS=Danio rerio GN=rbm24 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 5.700e-27
Identity = 85/222 (38.29%), Postives = 103/222 (46.40%), Query Frame = 1


		  
Query: 29  DTTYTKVFVGGLAWETQSETMRRYFEHFGEILEAVVITDKNTGRSKGYGFVTFRDPESAR 88
           DTTYTK+FVGGL + T   ++R+YFE FGEI EAVVITD+ TG+S+GYGFVT  D  +A 
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAAD 66

Query: 89  RACADPTPIIDGRRANCNLASLG-RPR---PALSFGRLRSPSPYIGNPRASMGGVGYQQP 148
           RAC DP PIIDGR+AN NLA LG +PR   P  +FG  +    +I  P        Y  P
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLGAKPRVMQPGFTFGVPQIHPAFIQRP--------YGIP 126

Query: 149 VPYNYQQGYVYSMYGFQPYGP--EYPYTQGLYNPYMGQQYLQLYGVPGTPGGPMYPYGQL 208
             Y Y Q ++          P          Y  Y G  Y Q            Y     
Sbjct: 127 THYVYPQAFMQPSVVIPHIQPTATSATASSPYIDYTGAAYAQYASAATAAAAAAYEQYPY 186

Query: 209 GQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASIPSIQ 245
             S    GY     Y     Q +    PG  A   A+    Q
Sbjct: 187 AASPAATGYVAAAGYGYAMQQPLATAAPGSAAAAAAAFGQYQ 220

[Close]

BLAST of Spo00346.1 vs. ExPASy Swiss-Prot
Match: RB24B_XENLA (RNA-binding protein 24-B OS=Xenopus laevis GN=rbm24-b PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 5.700e-27
Identity = 86/220 (39.09%), Postives = 104/220 (47.27%), Query Frame = 1


		  
Query: 29  DTTYTKVFVGGLAWETQSETMRRYFEHFGEILEAVVITDKNTGRSKGYGFVTFRDPESAR 88
           DTTYTK+FVGGL + T   ++R+YFE FG+I EAVVITD+ TG+S+GYGFVT  D  +A 
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 89  RACADPTPIIDGRRANCNLASLG-RPR---PALSFGRLRSPSPYIGNPRASMGGVGYQQP 148
           RAC DP PIIDGR+AN NLA LG +PR   P  +FG  +     +  P        Y  P
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQIHPALVQRP--------YGIP 126

Query: 149 VPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQQYLQLYGVPGTPGGPMYPYGQLGQ 208
             Y Y Q YV               +   Y  Y    Y Q Y          YPY     
Sbjct: 127 AHYVYPQAYVQQGLVIPHVQQTAAASTSPYIDYTSAAYAQ-YAAAAAAAYDQYPY---AA 186

Query: 209 SVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTASIPSIQ 245
           S    GY     Y     Q +    PG  A   A+    Q
Sbjct: 187 SPATTGYVTAAGYGYAVPQPLTAATPGTAAAAAAAFAQYQ 214

[Close]

BLAST of Spo00346.1 vs. TAIR (Arabidopsis)
Match: AT1G76460.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 364.4 bits (934), Expect = 6.400e-101
Identity = 193/294 (65.65%), Postives = 222/294 (75.51%), Query Frame = 1


		  
Query: 1   MAYQPSPGRPGSGSSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEIL 60
           MAYQP PG         SGF YLNSPFGDTT+TKVFVGGLAWETQSET+R++FE +GEIL
Sbjct: 1   MAYQPVPG---------SGFHYLNSPFGDTTFTKVFVGGLAWETQSETLRQHFEQYGEIL 60

Query: 61  EAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSF- 120
           EAVVI DKNTGRSKGYGFVTFRDPE+ARRACADPTPIIDGRRANCNLASLGRPRP L + 
Sbjct: 61  EAVVIADKNTGRSKGYGFVTFRDPEAARRACADPTPIIDGRRANCNLASLGRPRPPLPYA 120

Query: 121 ------GRLRSPSPYIGN---PRASM-GGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPY 180
                 GRLR  SPYIGN   PR S+ G   YQQP+PYNYQQG VY  YG   YGPEY Y
Sbjct: 121 VIPNMPGRLRPASPYIGNVQGPRGSLIGNYPYQQPLPYNYQQGVVYP-YGVTAYGPEYMY 180

Query: 181 --TQGLYNPYMGQQYLQLYGVPGTPGGPMYPYGQLGQSVQGG-GYTPIQNYPMPSHQIVQ 240
             +QGLY+PYMGQQYLQ+YGVPG    P+Y YGQL Q++  G GYT +Q Y +P   I+Q
Sbjct: 181 SQSQGLYSPYMGQQYLQVYGVPGAVNSPVYQYGQLSQTIPNGHGYTAVQGYSVPGSHILQ 240

Query: 241 LGGPGVNAMTTASIPSIQSPYHPGVVSPVPGQPQFMIHGHSPQFIQGGSSDQAT 281
           LGGP V+ MTT+S+P++Q+PY  G+  P P Q   ++  HSPQF+Q  +SDQ T
Sbjct: 241 LGGPTVSTMTTSSMPALQAPYPSGIPGPAPVQSHIIV--HSPQFMQSTASDQTT 282

[Close]

BLAST of Spo00346.1 vs. TAIR (Arabidopsis)
Match: AT1G20880.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 305.4 bits (781), Expect = 3.500e-83
Identity = 171/284 (60.21%), Postives = 195/284 (68.66%), Query Frame = 1


		  
Query: 14  SSSGSGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEILEAVVITDKNTGRS 73
           S   SGF YLNSPFGDTT+TKVFVGGLAWETQSET+RR+F+ +G+ILEAVVITDKNTGRS
Sbjct: 5   SIPSSGFHYLNSPFGDTTFTKVFVGGLAWETQSETLRRHFDQYGDILEAVVITDKNTGRS 64

Query: 74  KGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSF-------GRLRSPS 133
           KGYGFVTFRDPE+ARRAC DPTPIIDGRRANCNLASLGR RP + +       GR+R PS
Sbjct: 65  KGYGFVTFRDPEAARRACVDPTPIIDGRRANCNLASLGRSRPPMQYAVIPHAPGRVRPPS 124

Query: 134 PYIG---NPRA-SMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPY--TQGLYNPYMGQ 193
           PY+G   +PR    G   Y QP  YNYQQG VY  YG  PYGP+Y Y  +QG Y PYMGQ
Sbjct: 125 PYVGSVQSPRGLHFGSHPYHQPPTYNYQQGVVYP-YGVTPYGPDYMYSQSQGFYGPYMGQ 184

Query: 194 QYLQLYGVPGTPGGPMYPYGQLGQSVQGG-GYTPIQNYPMPSHQIVQLGGPGVNAMTTAS 253
           QYLQ+YGVPG    P Y YGQL  ++ G  GYT  Q Y  P   ++QLG        T+ 
Sbjct: 185 QYLQVYGVPGAVNSPGYQYGQLSHTIPGAHGYTAGQGYSHPGSHVLQLG-------ATSP 244

Query: 254 IPSIQSPYHPGVVSPVPGQP--QFMIHGHSPQFIQGGSSDQATG 282
           + +IQSPY      P P  P  Q +I    PQ+IQ   SDQ TG
Sbjct: 245 MSAIQSPY------PSPSAPTHQRVIVQTPPQYIQSSGSDQTTG 274

[Close]

BLAST of Spo00346.1 vs. TAIR (Arabidopsis)
Match: AT1G78260.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 179.1 bits (453), Expect = 3.800e-45
Identity = 99/186 (53.23%), Postives = 119/186 (63.98%), Query Frame = 1


		  
Query: 22  YLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEILEAVVITDKNTGRSKGYGFVTF 81
           Y  SPFGDTTYTKVFVGGLAWET ++ MRRYFE FGEILEAV+ITDKNTG+SKGYGFVTF
Sbjct: 6   YYRSPFGDTTYTKVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGYGFVTF 65

Query: 82  RDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFGRLRSPSPYIGNPRASMGGVGY 141
           R+ +SA RA ADP P+IDGR+ANCN+AS GRPRP+   GR ++ SP            G 
Sbjct: 66  RESDSATRAVADPNPVIDGRKANCNIASFGRPRPSPPRGRGQTGSPSQYQSGGPSTYTGM 125

Query: 142 QQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMG-----QQYLQLYG----VPGTP 199
             P+P       +Y  YG+     ++ Y Q LYN  +      QQ  QLYG     P + 
Sbjct: 126 AAPLPPAAAPQLMYPSYGYTYNPDQFGYHQALYNTQLQQAQYYQQQQQLYGGGATSPSSS 185

[Close]

BLAST of Spo00346.1 vs. TAIR (Arabidopsis)
Match: AT1G22330.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 178.3 bits (451), Expect = 6.500e-45
Identity = 120/265 (45.28%), Postives = 146/265 (55.09%), Query Frame = 1


		  
Query: 18  SGFPYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEILEAVVITDKNTGRSKGYG 77
           S   Y  SPFGDTT+TKVFVGGLAWET ++ MRRYF+ FGEILEAV+ITDK TG+SKGYG
Sbjct: 2   SNTSYYRSPFGDTTHTKVFVGGLAWETPTDEMRRYFDQFGEILEAVIITDKATGKSKGYG 61

Query: 78  FVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPALSFGRLR--SPSPYIGNPRAS 137
           FVTFRD +SA RA ADP P+IDGR+ANCN+AS GRPRP+   GR +  SPS Y G  ++S
Sbjct: 62  FVTFRDSDSATRAVADPNPVIDGRKANCNIASFGRPRPSTPRGRGQGGSPSQYQGGGQSS 121

Query: 138 MGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNPYMGQ-QYL--QLYG----- 197
             G+    PV        +Y  YG+  Y  EY Y Q LYN  + Q QY   Q+YG     
Sbjct: 122 YTGMA--APVQQAAAAQLMYPSYGY-TYNSEYGYHQALYNAQLQQAQYYQQQMYGGGGAT 181

Query: 198 VPGTPGGPMYPYGQLGQSVQGGGYTPIQNYPMPSHQIVQ--------------LGGPGVN 257
            P +      PY  L            Q+Y    HQ  Q              +    V 
Sbjct: 182 SPSSSNIMPSPYYYLQAPSPRPYLHHQQHYQYHHHQQQQQQQQQRLPSASSYLIYPSNVE 241

Query: 258 AMTTASIPSIQSPYHPGVVSPVPGQ 259
           A T +++P+ Q P      S  P Q
Sbjct: 242 APTPSNVPTSQGPLSSSTESHAPQQ 263

[Close]

BLAST of Spo00346.1 vs. TAIR (Arabidopsis)
Match: AT2G46780.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 163.3 bits (412), Expect = 2.200e-40
Identity = 117/262 (44.66%), Postives = 140/262 (53.44%), Query Frame = 1


		  
Query: 24  NSPFGDTTYTKVFVGGLAWETQSETMRRYFEHFGEILEAVVITDKNTGRSKGYGFVTFRD 83
           N+   DT  TK+FVGGLAWETQ +TMRRYFE FGEI+EAVVITDKNTGRSKGYGFVTF++
Sbjct: 13  NNNTTDTKLTKIFVGGLAWETQRDTMRRYFEQFGEIVEAVVITDKNTGRSKGYGFVTFKE 72

Query: 84  PESARRACADPTPIIDGRRANCNLASLG--RPRPALS----FGRLRSPSPYIG----NPR 143
            E+A RAC +  P+IDGRRANCNLA LG  +PRP  S     GR RSP   +G    +P+
Sbjct: 73  AEAAMRACQNMNPVIDGRRANCNLACLGAQKPRPPTSPRHGTGRFRSPGSGVGLVAPSPQ 132

Query: 144 ----ASMGGVGYQQPVPYNYQQGYVYSMYGFQPYGPEYPYTQGLYNP--YMGQQYLQLYG 203
               +S     +QQ   +  Q  + YS YGF  Y  E  Y    YN   Y GQQ+    G
Sbjct: 133 FRGSSSSSAFVHQQQQQHTAQFPFPYSTYGFSGYSQEGMYPMNYYNHHLYGGQQFSPYMG 192

Query: 204 VP--GTPG-----GPMYP-YGQLGQSVQGGGYTPIQNYPMPSHQIVQLGGPGVNAMTTAS 262
            P  G+ G      P YP Y     S Q       Q++   S Q      P         
Sbjct: 193 HPSAGSTGMFHGFYPYYPQYNAAQSSNQAQAQVQAQHHQGFSFQYTAPPAP--------- 252

The following BLAST results are available for this feature:

BLAST of Spo00346.1 vs. NCBI nr
BLAST of Spo00346.1 vs. UniProtKB/TrEMBL
BLAST of Spo00346.1 vs. ExPASy Swiss-Prot
BLAST of Spo00346.1 vs. TAIR (Arabidopsis)

BLAST of Spo00346.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902176143\|gb\|KNA08726.1\|	2.5e-163	100.	hypothetical protein SOVF_1600...	[more]
gi\|902176142\|gb\|KNA08725.1\|	3.0e-161	97.5	hypothetical protein SOVF_1600...	[more]
gi\|902176141\|gb\|KNA08724.1\|	6.8e-145	98.8	hypothetical protein SOVF_1600...	[more]
gi\|731314434\|ref\|XP_010686584.1\|	4.4e-144	88.9	PREDICTED: RNA-binding protein...	[more]
gi\|902176144\|gb\|KNA08727.1\|	4.1e-142	98.0	hypothetical protein SOVF_1600...	[more]

BLAST of Spo00346.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QQC6_SPIOL	1.7e-163	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9QNA9_SPIOL	2.1e-161	97.5	Uncharacterized protein OS=Spi...	[more]
A0A0K9QN92_SPIOL	4.7e-145	98.8	Uncharacterized protein OS=Spi...	[more]
A0A0J8CZF1_BETVU	3.1e-144	88.9	Uncharacterized protein OS=Bet...	[more]
A0A0K9QNB0_SPIOL	2.9e-142	98.0	Uncharacterized protein OS=Spi...	[more]

BLAST of Spo00346.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
ARP1_ARATH	2.7e-29	38.2	Probable RNA-binding protein A...	[more]
RB24A_XENLA	6.8e-28	39.0	RNA-binding protein 24-A OS=Xe...	[more]
RBM24_HUMAN	3.4e-27	39.6	RNA-binding protein 24 OS=Homo...	[more]
RBM24_DANRE	5.7e-27	38.2	RNA-binding protein 24 OS=Dani...	[more]
RB24B_XENLA	5.7e-27	39.0	RNA-binding protein 24-B OS=Xe...	[more]

BLAST of Spo00346.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G76460.1	6.4e-101	65.6	RNA-binding (RRM/RBD/RNP motif...	[more]
AT1G20880.1	3.5e-83	60.2	RNA-binding (RRM/RBD/RNP motif...	[more]
AT1G78260.1	3.8e-45	53.2	RNA-binding (RRM/RBD/RNP motif...	[more]
AT1G22330.1	6.5e-45	45.2	RNA-binding (RRM/RBD/RNP motif...	[more]
AT2G46780.1	2.2e-40	44.6	RNA-binding (RRM/RBD/RNP motif...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 35..91 score: 4.2
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 34..106 score: 1.0
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 33..110 score: 16
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	3.30.70.330		coord: 24..110 score: 3.0
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 22..133 score: 3.12
None	No IPR available	PANTHER	PTHR24012	FAMILY NOT NAMED	coord: 22..114 score: 1.4E-41coord: 254..261 score: 1.4
None	No IPR available	PANTHER	PTHR24012:SF421	SUBFAMILY NOT NAMED	coord: 254..261 score: 1.4E-41coord: 22..114 score: 1.4

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding