Spo00467.1 (mRNA)

Overview
NameSpo00467.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionActin-related protein 2/3 complex subunit 3 (Arp2/3 complex 21 kDa subunit)
LocationSpoScf_00976 : 78200 .. 81433 (+)
Sequence length1239
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCGTGTTTCGACCTTAAAAGCAATTTGTATTGTACACCTCGTGAATCAATGTACATTTTGTATCCAATTACTTCGTATAATAATTCAATTTCATTAGAGGAAAACGACGTCGGATACAGCACCTAAAAACTCAACTACCCCACAATCGGAAAAGGCCCGATGATAATCAGCTCTCATCAGCTTGAGAGTCTGGAACAACTGAACAAGGAAGGACTCTATAATAATTCAAAGATTCAATTGGTAATTTTTTTTTAATATTTCCTTAATTATCTTGTTAATCCATGATATTTTCAACATTCCCAGGGTTAATTTATTTATGGAAATATCTTCAATTTGATGTTTGTCGAATTAATTTTGTGATTAAATTTCTTGTGTCCAGATCTTTGGCGGGCAACATTGCTGCAATAGTGAGGTTCAAAGCTCATTATGGTGAGAGAATTTGACACCCTTTTCATTATTTGAGCTTAATTGTTGTTAAATTTCGTCAATTGTGATTGAATTTATAGTGAATTGGAACTAGAACTATGTTTAGTGGTTGCTGTGATTTTGGGGTTGAATTTGTTAAAATGAGTTGTTTTGGATCTTCTGGGATTGCTTTTGATCAACAACAACACCAAAGGCTTAGTCCAAAATGATTTGGGGTCGGCTAACATGAACCATAATAAGGAACAATCATAAAATGATTTGGGGTTGGCAAGAATTTCTGGGATTGCTTTTGATCTGGGTTTTTTTTAATCTAAATGTGCTTTCTTTAGCTAAATAGTGCAGAATTTGTGAATGATCGTTTTTCAATTGATTTCTTGTTCTGATGATGGTATTCCCATCTAAGGATGAATGTTATGGCGAAACCTTCAAATTTCTCTATGACGTTCTGTTACGTGCTCTTTCCGTTTCACCTTAAGTATCCATGTTGCACACTCGTCACTCGATGCTCTGATGTGGGTATGAACACTTTGAAACTTCAATCGTGTTGGTGAGCGTGCATAATCTTTGGAAAATGCGCGACTCTAACAACTAAACATGTACAAGTACATCATTAGGGCATCTTTAGAATAGGTGATCAAGGCTAATTCTTAGTTGTTTAGATTTTGAATTGATTTGTTTCTGTGCATCACTATACGTGTTTGATGCTAGAGGGATTAATAAGTTGTGGGTCCGAATGATCATAGGTTTACCACTCTAGTTTTGTTGATGAGGGAGGAGTAACAAAAGCTTGTGGTTGTCCACTACTTCCTTTGAAAAGCCATATCAAGGGTCCTGCTCCAGTTTCAGATCAAGGTTAGGCTAATAACGATTCATTTGTACTCGCTTATCCTTTTGTAAATGAGTTCTGCTACCTATTTCTCCTGTCGTTGATCAACGTGTGCTATGCAAACTTGTGCAGAAAGCATTGATATTGTTGATGAAGCAATTACCTTTTTCCGCGCTAATGTCTTCTTCAGGAATTTCGACATAAAGAGCTCTGCCGATAAGCTGCTTATCTACTTGACATACTATGTCAATGTTGCTTTGAAGAGGCTTGAGGGATGCAGAACATTGGCTGAAGGTACCAAGGCCATTATTAATTTGGGTCTTGAGGAAGTTCCGGTGCCTGGAGAGTCTGGGTTTCCTTTCCCTGGTTTATTCACACCTCCTAAAGGCCATCAGGAAGCACGTAAATTTCTCAACTTCATCCTTACTATAGCTATTATAGATTATAACGTAAACTTGCATGTTTAGCTATTAAATCTGCCTCTGTGAAGCATGTTTCTCCAAACTAGGATTTAGGATTACCAATTCGCATTTGAAAATGCATATGCAAAGGCCAAATTTCAGGATTAGAGCCATATTATCTTCATACTTGACAACCCAAAATGCACTTTTGCAAATTTTTTGGATTCAGAACCGTGTTTGTCAGCTTCATCCTGTGAAATGACCTGATTAAGTGTTCGATTAGGCTTTTCCTCTGATTTGCTACAACGTGTTGTTATCAGATGTCATGAAGTAGGTTATTTTGTTTCCTTAGAACAGCGGAGATTGTCATAAAACAACAGCTTCTGATGTTATCACCTACGTAACTGATAGCTGGAACTTGGGTATTGGACTATTGGTACGGTATCACACAATCACACCCATGTTTATGTCCAAATGTCGTGAAAAATTACCATATTGGTCCATAGTGAAGTACTGAAGTGTCAAGTATCAACACTCGTATTAGAACGTGGAGGATTCAACGTAGAGTGCTTGAGGCCGTAAAAAGAAGAGTCTAGGTTAAATATGTACCACTATTGTTCCATTTCTCAGATATTGAAAAACAGCATGCTCCTTTTTCAGTCTAGTTTGATAAAACCCGGGGGAATGTTATGTTGAACTGATTCCAGTTGCCTACCATATGACATTCGGCAACTCAAAACTTTCTATTTACCTTGTATTTTTCCTCCCATGTGTAAACAGTGTTATTCAGAAACTACCTGAAGCAGATAAGAGAAGAAACAAGTGGGAGATTACTGGGCGTTGCTTATCGACCTAATGGCACTCCAAATAAATGGTGGTTGGCATTTGCTAAGAGGAAATTTGTGAACATCATTGCACTGTAATCAGCTGCTTGCTTGCCGGAAGTACGTGTCAGAAAGAACGAAGAATGAAACAAACATCCAGTTTCAAACAAGTAAGACTGCTCTATGAAATCTGTTCTGCTATGGTGAAAAGAACGTAAAACAAATTAATCAAACGTGTAATTCTTCAAACATTTTTCGACTAGGCAATCAAATTGATGATTATCTCAGTAGGTGTTCTGTATAAAGAAATCTACTAATCTGTGCAGAACCTCTTTAACATACTTGTATGATATCATGCCTGTTGTTCGCGAAGCTAATCAAGTTCGTATACTCTATAACAGCAACCTCGGTATATCTTAGCACATATGGGCACATTGGTAAGCCATGGTTCAGTAGTTGTGCAACACGAAGCACCTTGCGCGTGAACTAGTTCATTTCTCATACTGCTCTCGTTTTCTTTTGTTATATTTTTTTTTTTAAAGTAAGATACAGTGTAAAGCTAATCATGTTTTCTCTCAAGATGTGAAAATAAGTTTTTTTCTTTGGTTACATGACACTCATTTTATCCACAATTATTTGTTACATTGTTTACACCATTCATATAGAAAATTTTAACCTAATTTCACTTGAATATCTTTTTTCATAGTTGTGTTATTTTTTCTTCCACTTCTCCACTTCACTCATCCTAAACTAAAC

mRNA sequence

TTCGTGTTTCGACCTTAAAAGCAATTTGTATTGTACACCTCGTGAATCAATGTACATTTTGTATCCAATTACTTCGTATAATAATTCAATTTCATTAGAGGAAAACGACGTCGGATACAGCACCTAAAAACTCAACTACCCCACAATCGGAAAAGGCCCGATGATAATCAGCTCTCATCAGCTTGAGAGTCTGGAACAACTGAACAAGGAAGGACTCTATAATAATTCAAAGATTCAATTGATCTTTGGCGGGCAACATTGCTGCAATAGTGAGGTTCAAAGCTCATTATGGTTTACCACTCTAGTTTTGTTGATGAGGGAGGAGTAACAAAAGCTTGTGGTTGTCCACTACTTCCTTTGAAAAGCCATATCAAGGGTCCTGCTCCAGTTTCAGATCAAGAAAGCATTGATATTGTTGATGAAGCAATTACCTTTTTCCGCGCTAATGTCTTCTTCAGGAATTTCGACATAAAGAGCTCTGCCGATAAGCTGCTTATCTACTTGACATACTATGTCAATGTTGCTTTGAAGAGGCTTGAGGGATGCAGAACATTGGCTGAAGGTACCAAGGCCATTATTAATTTGGGTCTTGAGGAAGTTCCGGTGCCTGGAGAGTCTGGGTTTCCTTTCCCTGGTTTATTCACACCTCCTAAAGGCCATCAGGAAGCACTGTTATTCAGAAACTACCTGAAGCAGATAAGAGAAGAAACAAGTGGGAGATTACTGGGCGTTGCTTATCGACCTAATGGCACTCCAAATAAATGGTGGTTGGCATTTGCTAAGAGGAAATTTGTGAACATCATTGCACTGTAATCAGCTGCTTGCTTGCCGGAAGTACGTGTCAGAAAGAACGAAGAATGAAACAAACATCCAGTTTCAAACAACAACCTCGGTATATCTTAGCACATATGGGCACATTGGTAAGCCATGGTTCAGTAGTTGTGCAACACGAAGCACCTTGCGCGTGAACTAGTTCATTTCTCATACTGCTCTCGTTTTCTTTTGTTATATTTTTTTTTTTAAAGTAAGATACAGTGTAAAGCTAATCATGTTTTCTCTCAAGATGTGAAAATAAGTTTTTTTCTTTGGTTACATGACACTCATTTTATCCACAATTATTTGTTACATTGTTTACACCATTCATATAGAAAATTTTAACCTAATTTCACTTGAATATCTTTTTTCATAGTTGTGTTATTTTTTCTTCCACTTCTCCACTTCACTCATCCTAAACTAAAC

Coding sequence (CDS)

ATGGTTTACCACTCTAGTTTTGTTGATGAGGGAGGAGTAACAAAAGCTTGTGGTTGTCCACTACTTCCTTTGAAAAGCCATATCAAGGGTCCTGCTCCAGTTTCAGATCAAGAAAGCATTGATATTGTTGATGAAGCAATTACCTTTTTCCGCGCTAATGTCTTCTTCAGGAATTTCGACATAAAGAGCTCTGCCGATAAGCTGCTTATCTACTTGACATACTATGTCAATGTTGCTTTGAAGAGGCTTGAGGGATGCAGAACATTGGCTGAAGGTACCAAGGCCATTATTAATTTGGGTCTTGAGGAAGTTCCGGTGCCTGGAGAGTCTGGGTTTCCTTTCCCTGGTTTATTCACACCTCCTAAAGGCCATCAGGAAGCACTGTTATTCAGAAACTACCTGAAGCAGATAAGAGAAGAAACAAGTGGGAGATTACTGGGCGTTGCTTATCGACCTAATGGCACTCCAAATAAATGGTGGTTGGCATTTGCTAAGAGGAAATTTGTGAACATCATTGCACTGTAA

Protein sequence

MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTPPKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo00467Spo00467gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo00467.1Spo00467.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo00467.1.exon.1Spo00467.1.exon.1exon
Spo00467.1.exon.2Spo00467.1.exon.2exon
Spo00467.1.exon.3Spo00467.1.exon.3exon
Spo00467.1.exon.4Spo00467.1.exon.4exon
Spo00467.1.exon.5Spo00467.1.exon.5exon
Spo00467.1.exon.6Spo00467.1.exon.6exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo00467.1.utr5p.1Spo00467.1.utr5p.1five_prime_UTR
Spo00467.1.utr5p.2Spo00467.1.utr5p.2five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo00467.1.CDS.1Spo00467.1.CDS.1CDS
Spo00467.1.CDS.2Spo00467.1.CDS.2CDS
Spo00467.1.CDS.3Spo00467.1.CDS.3CDS
Spo00467.1.CDS.4Spo00467.1.CDS.4CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo00467.1.utr3p.1Spo00467.1.utr3p.1three_prime_UTR
Spo00467.1.utr3p.2Spo00467.1.utr3p.2three_prime_UTR


Homology
[Close]
BLAST of Spo00467.1 vs. NCBI nr
Match: gi|902180184|gb|KNA09494.1| (hypothetical protein SOVF_153040 [Spinacia oleracea])

HSP 1 Score: 362.5 bits (929), Expect = 4.200e-97
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60
           MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120
           IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP
Sbjct: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120

Query: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL 175
           PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL
Sbjct: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL 174
[Close]
BLAST of Spo00467.1 vs. NCBI nr
Match: gi|731352999|ref|XP_010687840.1| (PREDICTED: actin-related protein 2/3 complex subunit 3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 342.4 bits (877), Expect = 4.500e-91
Identity = 162/174 (93.10%), Postives = 168/174 (96.55%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60
           MVYHSSFVDE GVTKACGCPLLPLKSHIKGPAPVSDQES DIVDE+ITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVDEEGVTKACGCPLLPLKSHIKGPAPVSDQESTDIVDESITFFRANVFFRNFD 60

Query: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120
           IKSSADKLLIYLTYY+N+ALKRLEGCRTLAEGTKAIINLGLE+VPVPGE GFPFPGLF+P
Sbjct: 61  IKSSADKLLIYLTYYINIALKRLEGCRTLAEGTKAIINLGLEDVPVPGEPGFPFPGLFSP 120

Query: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL 175
           PK HQEA LFRNYLKQIREETSGRLL VAYRPNGTPNKWWLAF+KRKFVNIIAL
Sbjct: 121 PKSHQEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFSKRKFVNIIAL 174
[Close]
BLAST of Spo00467.1 vs. NCBI nr
Match: gi|802666061|ref|XP_012081164.1| (PREDICTED: actin-related protein 2/3 complex subunit 3 [Jatropha curcas])

HSP 1 Score: 324.3 bits (830), Expect = 1.300e-85
Identity = 153/174 (87.93%), Postives = 162/174 (93.10%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60
           MVYHSSFVDE GV KACGCPLLPLKSHIKGPAPVSDQ+  DIVDEAITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVDEEGVAKACGCPLLPLKSHIKGPAPVSDQDRTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120
           IKS ADKLLIYLT+Y+NVALKRLEGCRTLAEGTKAIINLGLE VPVPGESGFPFPGLF  
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAEGTKAIINLGLENVPVPGESGFPFPGLFVN 120

Query: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL 175
           P+  +EA LFRNYLKQ+REETSGRLL VAYRPNGTPNKWW+AFAKRKF+N+IAL
Sbjct: 121 PESQKEAELFRNYLKQMREETSGRLLSVAYRPNGTPNKWWIAFAKRKFMNVIAL 174
[Close]
BLAST of Spo00467.1 vs. NCBI nr
Match: gi|356562945|ref|XP_003549728.1| (PREDICTED: actin-related protein 2/3 complex subunit 3 [Glycine max])

HSP 1 Score: 323.9 bits (829), Expect = 1.700e-85
Identity = 153/172 (88.95%), Postives = 163/172 (94.77%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60
           MVYHSSFV+E GV++ACGCPLLPLKSHIKGPAPVSDQ+  DIVDEAITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVNEDGVSRACGCPLLPLKSHIKGPAPVSDQDRTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120
           IKS ADKLLIYLT+Y+NVALKRLEGCRTLAEGTKAIINLGLE+VPVPGESGFPFPGLF  
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAEGTKAIINLGLEKVPVPGESGFPFPGLFPL 120

Query: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNII 173
           P+ H+EA LFRNYLKQIREETSGRLL VAYRPNGTPNKWWLAFAKRKF+NII
Sbjct: 121 PQSHKEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNII 172
[Close]
BLAST of Spo00467.1 vs. NCBI nr
Match: gi|1000943764|ref|XP_015581843.1| (PREDICTED: actin-related protein 2/3 complex subunit 3 isoform X2 [Ricinus communis])

HSP 1 Score: 323.6 bits (828), Expect = 2.200e-85
Identity = 154/174 (88.51%), Postives = 162/174 (93.10%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60
           MVYHSSFVDE GV KACGCPLLPLKSHIKGPAPVSDQ   DIVDEAITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVDEEGVKKACGCPLLPLKSHIKGPAPVSDQGRTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120
           IKS ADKLLIYLT+Y+NVALKRLEGCRTLAEGTKAIINLGLE+VPVPGESGFPFPGLF  
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAEGTKAIINLGLEKVPVPGESGFPFPGLFVN 120

Query: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL 175
           P+  ++A LFRNYLKQIREETSGRLL VAYRPNGTPNKWWLAFAKRKF+N+IAL
Sbjct: 121 PESQKDAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNVIAL 174
[Close]
BLAST of Spo00467.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QQE4_SPIOL (Actin-related protein 2/3 complex subunit 3 OS=Spinacia oleracea GN=SOVF_153040 PE=3 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 3.000e-97
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60
           MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120
           IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP
Sbjct: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120

Query: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL 175
           PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL
Sbjct: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL 174
[Close]
BLAST of Spo00467.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BN72_BETVU (Actin-related protein 2/3 complex subunit 3 OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g193060 PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 3.200e-91
Identity = 162/174 (93.10%), Postives = 168/174 (96.55%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60
           MVYHSSFVDE GVTKACGCPLLPLKSHIKGPAPVSDQES DIVDE+ITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVDEEGVTKACGCPLLPLKSHIKGPAPVSDQESTDIVDESITFFRANVFFRNFD 60

Query: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120
           IKSSADKLLIYLTYY+N+ALKRLEGCRTLAEGTKAIINLGLE+VPVPGE GFPFPGLF+P
Sbjct: 61  IKSSADKLLIYLTYYINIALKRLEGCRTLAEGTKAIINLGLEDVPVPGEPGFPFPGLFSP 120

Query: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL 175
           PK HQEA LFRNYLKQIREETSGRLL VAYRPNGTPNKWWLAF+KRKFVNIIAL
Sbjct: 121 PKSHQEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFSKRKFVNIIAL 174
[Close]
BLAST of Spo00467.1 vs. UniProtKB/TrEMBL
Match: A0A067K2A9_JATCU (Actin-related protein 2/3 complex subunit 3 OS=Jatropha curcas GN=JCGZ_17009 PE=3 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 8.900e-86
Identity = 153/174 (87.93%), Postives = 162/174 (93.10%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60
           MVYHSSFVDE GV KACGCPLLPLKSHIKGPAPVSDQ+  DIVDEAITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVDEEGVAKACGCPLLPLKSHIKGPAPVSDQDRTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120
           IKS ADKLLIYLT+Y+NVALKRLEGCRTLAEGTKAIINLGLE VPVPGESGFPFPGLF  
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAEGTKAIINLGLENVPVPGESGFPFPGLFVN 120

Query: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL 175
           P+  +EA LFRNYLKQ+REETSGRLL VAYRPNGTPNKWW+AFAKRKF+N+IAL
Sbjct: 121 PESQKEAELFRNYLKQMREETSGRLLSVAYRPNGTPNKWWIAFAKRKFMNVIAL 174
[Close]
BLAST of Spo00467.1 vs. UniProtKB/TrEMBL
Match: I1MU29_SOYBN (Actin-related protein 2/3 complex subunit 3 OS=Glycine max GN=GLYMA_17G108800 PE=3 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.200e-85
Identity = 153/172 (88.95%), Postives = 163/172 (94.77%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60
           MVYHSSFV+E GV++ACGCPLLPLKSHIKGPAPVSDQ+  DIVDEAITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVNEDGVSRACGCPLLPLKSHIKGPAPVSDQDRTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120
           IKS ADKLLIYLT+Y+NVALKRLEGCRTLAEGTKAIINLGLE+VPVPGESGFPFPGLF  
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAEGTKAIINLGLEKVPVPGESGFPFPGLFPL 120

Query: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNII 173
           P+ H+EA LFRNYLKQIREETSGRLL VAYRPNGTPNKWWLAFAKRKF+NII
Sbjct: 121 PQSHKEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNII 172
[Close]
BLAST of Spo00467.1 vs. UniProtKB/TrEMBL
Match: V7CCQ3_PHAVU (Actin-related protein 2/3 complex subunit 3 OS=Phaseolus vulgaris GN=PHAVU_003G171200g PE=3 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.000e-85
Identity = 152/172 (88.37%), Postives = 163/172 (94.77%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60
           MVYHSSFV+E GV++ACGCPLLPLKSHIKGPAPVSDQ++ DIVDEAITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVNEDGVSRACGCPLLPLKSHIKGPAPVSDQDTTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120
           IKS ADKLLIYLT+Y+N+ALKRLEGCRTLAEGTKAIINLGLE+VPVPGESGFPF GLF P
Sbjct: 61  IKSPADKLLIYLTFYINIALKRLEGCRTLAEGTKAIINLGLEKVPVPGESGFPFAGLFPP 120

Query: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNII 173
           P+  QEA LFRNYLKQIREETSGRLL VAYRPNGTPNKWWLAFAKRKF+NII
Sbjct: 121 PQSDQEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNII 172
[Close]
BLAST of Spo00467.1 vs. ExPASy Swiss-Prot
Match: ARPC3_ARATH (Actin-related protein 2/3 complex subunit 3 OS=Arabidopsis thaliana GN=ARPC3 PE=1 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 3.700e-85
Identity = 147/174 (84.48%), Postives = 160/174 (91.95%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60
           MVYHSSFVDE GVTKACGCPLLPLKSHIKGPAPVS+Q+  DIVDEAITFFRANVFF NFD
Sbjct: 1   MVYHSSFVDEEGVTKACGCPLLPLKSHIKGPAPVSEQDKTDIVDEAITFFRANVFFTNFD 60

Query: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120
           IKS ADKLLIYLT+Y+NVALKRLEGCRTLA GTKAIINLGLE++PVPGE+GFPFPGLF+ 
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDIPVPGETGFPFPGLFSL 120

Query: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL 175
           P+   EA LFRNYLKQ+REETSGRLL VAYR NGTPNKWWLAFAKRKF+N++ L
Sbjct: 121 PQSQDEAELFRNYLKQVREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNVVVL 174
[Close]
BLAST of Spo00467.1 vs. ExPASy Swiss-Prot
Match: ARPC3_BOVIN (Actin-related protein 2/3 complex subunit 3 OS=Bos taurus GN=ARPC3 PE=1 SV=3)

HSP 1 Score: 161.4 bits (407), Expect = 9.000e-39
Identity = 78/170 (45.88%), Postives = 112/170 (65.88%), Query Frame = 1 

		  

Query: 3   YHSSFVDEGGVTKACG-CPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFDI 62
           YHSS +D    TK  G   LLP++S  KGPAP   +++ DIVDEAI +F+ANVFF+N++I
Sbjct: 4   YHSSLMDPD--TKLIGNMALLPIRSQFKGPAPRETKDT-DIVDEAIYYFKANVFFKNYEI 63

Query: 63  KSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTPP 122
           K+ AD+ LIY+T Y++  LK+L+ C + ++G K +  LG+   P+PGE GFP   ++  P
Sbjct: 64  KNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKP 123

Query: 123 KGHQEALLFRNYLKQIREETSGRLLGVAYRP-NGTPNKWWLAFAKRKFVN 171
              QE  + R YL+Q+R+ET  RL    + P N  P+KWW  F KR+F+N
Sbjct: 124 ANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMN 170
[Close]
BLAST of Spo00467.1 vs. ExPASy Swiss-Prot
Match: ARPC3_HUMAN (Actin-related protein 2/3 complex subunit 3 OS=Homo sapiens GN=ARPC3 PE=1 SV=3)

HSP 1 Score: 161.4 bits (407), Expect = 9.000e-39
Identity = 78/170 (45.88%), Postives = 112/170 (65.88%), Query Frame = 1 

		  

Query: 3   YHSSFVDEGGVTKACG-CPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFDI 62
           YHSS +D    TK  G   LLP++S  KGPAP   +++ DIVDEAI +F+ANVFF+N++I
Sbjct: 4   YHSSLMDPD--TKLIGNMALLPIRSQFKGPAPRETKDT-DIVDEAIYYFKANVFFKNYEI 63

Query: 63  KSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTPP 122
           K+ AD+ LIY+T Y++  LK+L+ C + ++G K +  LG+   P+PGE GFP   ++  P
Sbjct: 64  KNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKP 123

Query: 123 KGHQEALLFRNYLKQIREETSGRLLGVAYRP-NGTPNKWWLAFAKRKFVN 171
              QE  + R YL+Q+R+ET  RL    + P N  P+KWW  F KR+F+N
Sbjct: 124 ANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMN 170
[Close]
BLAST of Spo00467.1 vs. ExPASy Swiss-Prot
Match: ARPC3_MOUSE (Actin-related protein 2/3 complex subunit 3 OS=Mus musculus GN=Arpc3 PE=1 SV=3)

HSP 1 Score: 160.6 bits (405), Expect = 1.500e-38
Identity = 78/170 (45.88%), Postives = 112/170 (65.88%), Query Frame = 1 

		  

Query: 3   YHSSFVDEGGVTKACG-CPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFDI 62
           YHSS +D    TK  G   LLPL+S  KGPAP   +++ DIVDEAI +F+ANVFF+N++I
Sbjct: 4   YHSSLMDPD--TKLIGNMALLPLRSQFKGPAPRETKDT-DIVDEAIYYFKANVFFKNYEI 63

Query: 63  KSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTPP 122
           K+ AD+ LIY+T Y++  LK+L+ C + ++G K +  LG+   P+PGE GFP   ++  P
Sbjct: 64  KNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKP 123

Query: 123 KGHQEALLFRNYLKQIREETSGRLLGVAYRP-NGTPNKWWLAFAKRKFVN 171
              QE  + R YL+Q+R+ET  RL    + P +  P+KWW  F KR+F+N
Sbjct: 124 ASKQEDEMMRAYLQQLRQETGLRLCEKVFDPQSDKPSKWWTCFVKRQFMN 170
[Close]
BLAST of Spo00467.1 vs. ExPASy Swiss-Prot
Match: ARPC3_DICDI (Actin-related protein 2/3 complex subunit 3 OS=Dictyostelium discoideum GN=arcC PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.300e-34
Identity = 74/172 (43.02%), Postives = 101/172 (58.72%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACG-CPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNF 60
           MVYHS F DE    +  G  P+LPLK+  KGPAP  D  S+DI+DEA+  F+AN+ FRNF
Sbjct: 1   MVYHSQFNDESAGFRLVGNVPILPLKTTHKGPAPKGDANSVDIIDEALDLFKANILFRNF 60

Query: 61  DIKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFT 120
           +++ + D++LIYLT Y+   L ++      A+  KA+  +  E+  +PGES FP  GL T
Sbjct: 61  EVQGNGDRVLIYLTLYITKCLLKIAPMNK-ADAEKALFLIAQEQFSIPGESAFPLGGLVT 120

Query: 121 PPKGHQEALLFRNYLKQIREETSGRLLGVAYRPN-GTPNKWWLAFAKRKFVN 171
            P     A   R Y  Q+R E   RL    Y  +    NKWW+ F+KRKF+N
Sbjct: 121 VPNTRDAADTLRQYFTQLRLELGVRLCQRVYAVDPSKANKWWICFSKRKFLN 171
[Close]
BLAST of Spo00467.1 vs. TAIR (Arabidopsis)
Match: AT1G60430.1 (actin-related protein C3)

HSP 1 Score: 315.5 bits (807), Expect = 2.100e-86
Identity = 147/174 (84.48%), Postives = 160/174 (91.95%), Query Frame = 1 

		  

Query: 1   MVYHSSFVDEGGVTKACGCPLLPLKSHIKGPAPVSDQESIDIVDEAITFFRANVFFRNFD 60
           MVYHSSFVDE GVTKACGCPLLPLKSHIKGPAPVS+Q+  DIVDEAITFFRANVFF NFD
Sbjct: 1   MVYHSSFVDEEGVTKACGCPLLPLKSHIKGPAPVSEQDKTDIVDEAITFFRANVFFTNFD 60

Query: 61  IKSSADKLLIYLTYYVNVALKRLEGCRTLAEGTKAIINLGLEEVPVPGESGFPFPGLFTP 120
           IKS ADKLLIYLT+Y+NVALKRLEGCRTLA GTKAIINLGLE++PVPGE+GFPFPGLF+ 
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDIPVPGETGFPFPGLFSL 120

Query: 121 PKGHQEALLFRNYLKQIREETSGRLLGVAYRPNGTPNKWWLAFAKRKFVNIIAL 175
           P+   EA LFRNYLKQ+REETSGRLL VAYR NGTPNKWWLAFAKRKF+N++ L
Sbjct: 121 PQSQDEAELFRNYLKQVREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNVVVL 174
The following BLAST results are available for this feature:
BLAST of Spo00467.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902180184|gb|KNA09494.1|4.2e-97100.hypothetical protein SOVF_1530... [more]
gi|731352999|ref|XP_010687840.1|4.5e-9193.1PREDICTED: actin-related prote... [more]
gi|802666061|ref|XP_012081164.1|1.3e-8587.9PREDICTED: actin-related prote... [more]
gi|356562945|ref|XP_003549728.1|1.7e-8588.9PREDICTED: actin-related prote... [more]
gi|1000943764|ref|XP_015581843.1|2.2e-8588.5PREDICTED: actin-related prote... [more]
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BLAST of Spo00467.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QQE4_SPIOL3.0e-97100.Actin-related protein 2/3 comp... [more]
A0A0J8BN72_BETVU3.2e-9193.1Actin-related protein 2/3 comp... [more]
A0A067K2A9_JATCU8.9e-8687.9Actin-related protein 2/3 comp... [more]
I1MU29_SOYBN1.2e-8588.9Actin-related protein 2/3 comp... [more]
V7CCQ3_PHAVU2.0e-8588.3Actin-related protein 2/3 comp... [more]
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BLAST of Spo00467.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ARPC3_ARATH3.7e-8584.4Actin-related protein 2/3 comp... [more]
ARPC3_BOVIN9.0e-3945.8Actin-related protein 2/3 comp... [more]
ARPC3_HUMAN9.0e-3945.8Actin-related protein 2/3 comp... [more]
ARPC3_MOUSE1.5e-3845.8Actin-related protein 2/3 comp... [more]
ARPC3_DICDI1.3e-3443.0Actin-related protein 2/3 comp... [more]
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BLAST of Spo00467.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G60430.12.1e-8684.4actin-related protein C3[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007204Actin-related protein 2/3 complex subunit 3GENE3D1.10.1760.10coord: 2..170
score: 6.0
IPR007204Actin-related protein 2/3 complex subunit 3PIRPIRSF016315p21-ARCcoord: 1..172
score: 9.4
IPR007204Actin-related protein 2/3 complex subunit 3PANTHERPTHR12391ARP2/3 COMPLEX 21 KD SUBUNITcoord: 1..171
score: 2.8E
IPR007204Actin-related protein 2/3 complex subunit 3PFAMPF04062P21-Arccoord: 2..170
score: 4.9
IPR007204Actin-related protein 2/3 complex subunit 3unknownSSF69060Arp2/3 complex 21 kDa subunit ARPC3coord: 2..170
score: 2.88
NoneNo IPR availablePANTHERPTHR12391:SF0ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 3coord: 1..171
score: 2.8E

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034314 Arp2/3 complex-mediated actin nucleation
biological_process GO:0030833 regulation of actin filament polymerization
biological_process GO:0009407 toxin catabolic process
cellular_component GO:0005885 Arp2/3 protein complex
cellular_component GO:0005856 cytoskeleton
cellular_component GO:0042995 cell projection
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003779 actin binding