Spo00680.1 (mRNA) | SpinachBase

Overview


Name	Spo00680.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	At3g32930-like protein
Location	chr4 : 5613113 .. 5616308 (-)
Sequence length	1568

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCTTTTATATTATGTAAAAACAATCATAGTCAAGTGAGATCTTGTTAAATTCGTATTAATGTCAAGATTCCAAATATCATTTTTTTATAATTTTTAATTACACGCAATTAGAGATATTAATATTCAAAGAAACATGTTGGATACGTAAAAAATGGAATGATGCATCTATTGCGAGACGGAGGTAGTACAAAATTCAATCATCCTATTCATATCCACTTTGAGTCTATGATAATCTCCTCTAGGCCCACATGAAAACACCAACCCGGGCCAAATCGACCCGAATCCAAAATATCTCATACAAAATTCAATCTCCCTGGAATTTTCAACATTGGCTTCTTTCACCATCAGCCATTTATCAACAAAACTTAATAAAATTGAGAGGTGAGTTCAGGAAAACAATGGCGGTTCCATTAGTACAGACAATCTCATCTTTGCAATCAACCCATTTGAAGTCGTACAATCACAGCCCATTTGCTGTTTCTTCTACCAATATTACTTCTACTTTGCTTCCCAAATCTCTTCTTCCTGATTTTCCAATTGGACACACATTAACCCTTAAATATTTTCTCAATTCCAAATCTTGTTGTAAAATTAATAAGTTCAATAACACTGCTTCAATTTGTGCTTCTTTGCTTGAGAACCCAATTTTGTGGGCTGGTAGAATTTGTGTTTTCTATGCTCTTTTGAAGACTGGTTTAGCTGGATCTCAATCCAATCCTATACTTTCAGGTAACATTTTTTTTTTGGATAATTTTTATGCCTTTTTGTTGATTATATTCAAGCTTAAATTGATGGGTTTGTTGGGATTTTGCTGAATTAATTTTCTGTGTTTTAACATTTCAGGTTCAGAAGCTGGAATGAGTGATGATGGTGCTGATTTGGGGTTCTCCAAGTGGTTGGATAAGTTCCAAAAGAATCCAGGTGTTTGGATTTTATCTGTTTTTGGTATAAAGTTATCATATTTTGTATCAACTTTTGGACTGAATGATTAATTTGGTATGTTATATGTTGGAGTTTGAGAAACAATGTGCTTTTGTCAAATTGAGCTTTTCTGTATTGGTCTGAAAGAAGTAAGTATATGTAGAAAGGATACTGATTGTCTGACTAATGTCATTTGACAGAATTAGAGTGTACAATTGCGGTTTAGCTATTTAAAGGATGTTAGAGTTGGTGAAATAATGTGTTTTTGTCAAATTGAAGTTTTCTGCATTGCTCTAAAAGATAAGAGTGTGTGCAATTGTGGTTTAGCTATTTAAAGGATGTTCGCTTTTATCCGAACCTTTTTTTATGTAATCACCATGTTTGTATCAAAGCTAGAATCACAACCATTGTTGCCTGTTGATGAGAAGTTGTTTTATACTTTTATGGAACATGAGAATATGTGTCTAGATAAGGTCTACTCTTGATCTTTCGAGTTTGTAACTTGAAGTCATTTATTCGTCTTCATCTCTTTTGATCAAGAACAATCATAATTTGTTCTTTAGCAGTGGAACTTAGCTACTAAAATGATATTGGAAAGAAAAACTTTTTGAGGTTTTTGAGCTCTTTGAGATAGCACAATAAGAGGTAGCGAAACCATTATGGTCTTAAATTCTGAATTCATGATCATATTTTCTGAAGATATGAGCTTACTTCATATCATTGACCAACAAACAGTTTCTTTCTTTCCAATGGCCATCAATTTGATATGTTAAAGAAGTTTTGCTGGGATTTTTGTAATCTGATATGAAGTTGCACCGTTTCCACGAGATTCAGGGGAATAATTGTGTCCATTTTCTGTATTTGTTAGACAAAGAAGCTGCTGACAAGCGGAAGTTGGTGAGCAAATGGCATCCTACAACAAAGGGAACATTAAAAAGGAACTATAGGATACCTTCCAAACCAGAAGGTCGGAGGCTTCTTAAAGCTATTGCATCCTTGCTCTCTGAGGATGATCACTTTGTAGACGTTACTTCACACAAGGTACTACAAAGAACAAAACCATGTCTTTGAGTTCCATAGAAGTAGGCTAGGGCCGTCAATAAGGAGGTCCAATAGGACCCAAAAAAATTAGTGATAACTCACATATCCCAATTATTGGTTATATAGTAAATCGTGCAAATAGAAGACACTTAATTGTTTGTGGATCAATGGTAAAACATTCTCTTAATATTCCTTAGGTTGTGGGATTGACTCCTAATATGTACATTTTTTCTTTTGCTTTTTAGTGTTACTAATCATTATATTAAGAAAAGGGCCTCCACATTAAGAAAAAAAGAACAGGGCCACCGAATTCCCAGAGACGCCCTTGAAGTAGGGCGGCTATAGGAAGGTCACAAATCATGTATTCTTGTGTCCTCTAAGCTTTATCATGTATAAAATTGCTTTAATATTGATTTTCAAAAGATTAATAAAGTTTTAATCATATACTGAATCTGTTCCATAAAAAAATGTTGAAATAAGTAAATGAATAACGAAAAAAAAGTGTTGACGGGAAAATTTTCATCGGGAAATGACATGTTTCATTCCTGATGTTTGTTTTAGTATAATGTAATAGATAGAAGTGCTTAATCCTTTGTTTTTCTACATGGTGAAGTCTTTACTTATCACTAGATTTCTTGTGTTTTAGGGTTGCCAGATTAGAAGGGAGAGTGCGCATGGAGAAAGTGTATGTTGCAACAATGTCAGAGCGCTCTTTGATGAGCTCCCAACGCCACATATCATTGTCGAGATCACACCTTTTCCTGCTGGACCTCTAACAGAAAGGGATTATGCTAAAGCTGAGAAAGTAGAGAAGGTGCTCAGATCTAGCCCTTCAGTTTGATTTTCCTCAACATCTTGGCAACTAACTTTGTAAATAATAAAGACACCTGACACAGTTTACATATATCTTGAACCTGTACTGTTCACGGATCAACAGTTTCTGTGTTTCAGTTTGAGTTGAAAGAATCATTTAGTTTGTAAGCATATTATCAGGTCTCAGGTCTTATGCAAGTGTTGTGTATTTTGTTTTGTAAAACTCGATCAGAAAGGGAGTTACTTAGTTAGTTATCCCTTTAATATGAATGAATGGTATTTTCATGACAAGGAACTGCAATGTTGAGCCTGAACAGAACAGAACAGAACAGGAAATACCAAGTGCAATTACAATTAATTAGAGAAAAGAGGGATCCCTTCACTTTTTGATAAATTGCTTCTTCAATATTCAGATGCAG

mRNA sequence

ATTCTTTTATATTATGTAAAAACAATCATAGTCAAGTGAGATCTTGTTAAATTCGTATTAATGTCAAGATTCCAAATATCATTTTTTTATAATTTTTAATTACACGCAATTAGAGATATTAATATTCAAAGAAACATGTTGGATACGTAAAAAATGGAATGATGCATCTATTGCGAGACGGAGGTAGTACAAAATTCAATCATCCTATTCATATCCACTTTGAGTCTATGATAATCTCCTCTAGGCCCACATGAAAACACCAACCCGGGCCAAATCGACCCGAATCCAAAATATCTCATACAAAATTCAATCTCCCTGGAATTTTCAACATTGGCTTCTTTCACCATCAGCCATTTATCAACAAAACTTAATAAAATTGAGAGGTGAGTTCAGGAAAACAATGGCGGTTCCATTAGTACAGACAATCTCATCTTTGCAATCAACCCATTTGAAGTCGTACAATCACAGCCCATTTGCTGTTTCTTCTACCAATATTACTTCTACTTTGCTTCCCAAATCTCTTCTTCCTGATTTTCCAATTGGACACACATTAACCCTTAAATATTTTCTCAATTCCAAATCTTGTTGTAAAATTAATAAGTTCAATAACACTGCTTCAATTTGTGCTTCTTTGCTTGAGAACCCAATTTTGTGGGCTGGTAGAATTTGTGTTTTCTATGCTCTTTTGAAGACTGGTTTAGCTGGATCTCAATCCAATCCTATACTTTCAGGTTCAGAAGCTGGAATGAGTGATGATGGTGCTGATTTGGGGTTCTCCAAGTGGTTGGATAAGTTCCAAAAGAATCCAGACAAAGAAGCTGCTGACAAGCGGAAGTTGGTGAGCAAATGGCATCCTACAACAAAGGGAACATTAAAAAGGAACTATAGGATACCTTCCAAACCAGAAGGTCGGAGGCTTCTTAAAGCTATTGCATCCTTGCTCTCTGAGGATGATCACTTTGTAGACGTTACTTCACACAAGGGTTGCCAGATTAGAAGGGAGAGTGCGCATGGAGAAAGTGTATGTTGCAACAATGTCAGAGCGCTCTTTGATGAGCTCCCAACGCCACATATCATTGTCGAGATCACACCTTTTCCTGCTGGACCTCTAACAGAAAGGGATTATGCTAAAGCTGAGAAAGTAGAGAAGGTGCTCAGATCTAGCCCTTCAGTTTGATTTTCCTCAACATCTTGGCAACTAACTTTGTAAATAATAAAGACACCTGACACAGTTTACATATATCTTGAACCTGTACTGTTCACGGATCAACAGTTTCTGTGTTTCAGTTTGAGTTGAAAGAATCATTTAGTTTGTAAGCATATTATCAGGTCTCAGGTCTTATGCAAGTGTTGTGTATTTTGTTTTGTAAAACTCGATCAGAAAGGGAGTTACTTAGTTAGTTATCCCTTTAATATGAATGAATGGTATTTTCATGACAAGGAACTGCAATGTTGAGCCTGAACAGAACAGAACAGAACAGGAAATACCAAGTGCAATTACAATTAATTAGAGAAAAGAGGGATCCCTTCACTTTTTGATAAATTGCTTCTTCAATATTCAGATGCAG

Coding sequence (CDS)

ATGAAAACACCAACCCGGGCCAAATCGACCCGAATCCAAAATATCTCATACAAAATTCAATCTCCCTGGAATTTTCAACATTGGCTTCTTTCACCATCAGCCATTTATCAACAAAACTTAATAAAATTGAGAGGTGAGTTCAGGAAAACAATGGCGGTTCCATTAGTACAGACAATCTCATCTTTGCAATCAACCCATTTGAAGTCGTACAATCACAGCCCATTTGCTGTTTCTTCTACCAATATTACTTCTACTTTGCTTCCCAAATCTCTTCTTCCTGATTTTCCAATTGGACACACATTAACCCTTAAATATTTTCTCAATTCCAAATCTTGTTGTAAAATTAATAAGTTCAATAACACTGCTTCAATTTGTGCTTCTTTGCTTGAGAACCCAATTTTGTGGGCTGGTAGAATTTGTGTTTTCTATGCTCTTTTGAAGACTGGTTTAGCTGGATCTCAATCCAATCCTATACTTTCAGGTTCAGAAGCTGGAATGAGTGATGATGGTGCTGATTTGGGGTTCTCCAAGTGGTTGGATAAGTTCCAAAAGAATCCAGACAAAGAAGCTGCTGACAAGCGGAAGTTGGTGAGCAAATGGCATCCTACAACAAAGGGAACATTAAAAAGGAACTATAGGATACCTTCCAAACCAGAAGGTCGGAGGCTTCTTAAAGCTATTGCATCCTTGCTCTCTGAGGATGATCACTTTGTAGACGTTACTTCACACAAGGGTTGCCAGATTAGAAGGGAGAGTGCGCATGGAGAAAGTGTATGTTGCAACAATGTCAGAGCGCTCTTTGATGAGCTCCCAACGCCACATATCATTGTCGAGATCACACCTTTTCCTGCTGGACCTCTAACAGAAAGGGATTATGCTAAAGCTGAGAAAGTAGAGAAGGTGCTCAGATCTAGCCCTTCAGTTTGA

Protein sequence

MKTPTRAKSTRIQNISYKIQSPWNFQHWLLSPSAIYQQNLIKLRGEFRKTMAVPLVQTISSLQSTHLKSYNHSPFAVSSTNITSTLLPKSLLPDFPIGHTLTLKYFLNSKSCCKINKFNNTASICASLLENPILWAGRICVFYALLKTGLAGSQSNPILSGSEAGMSDDGADLGFSKWLDKFQKNPDKEAADKRKLVSKWHPTTKGTLKRNYRIPSKPEGRRLLKAIASLLSEDDHFVDVTSHKGCQIRRESAHGESVCCNNVRALFDELPTPHIIVEITPFPAGPLTERDYAKAEKVEKVLRSSPSV

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo00680	Spo00680	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo00680.1	Spo00680.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00680.1.utr5p.1	Spo00680.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00680.1.CDS.4	Spo00680.1.CDS.4	CDS
Spo00680.1.CDS.3	Spo00680.1.CDS.3	CDS
Spo00680.1.CDS.2	Spo00680.1.CDS.2	CDS
Spo00680.1.CDS.1	Spo00680.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00680.1.utr3p.1	Spo00680.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00680.1.exon.4	Spo00680.1.exon.4	exon
Spo00680.1.exon.3	Spo00680.1.exon.3	exon
Spo00680.1.exon.2	Spo00680.1.exon.2	exon
Spo00680.1.exon.1	Spo00680.1.exon.1	exon

Homology

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BLAST of Spo00680.1 vs. NCBI nr
Match: gi|902236300|gb|KNA24316.1| (hypothetical protein SOVF_016730 [Spinacia oleracea])

HSP 1 Score: 519.6 bits (1337), Expect = 3.700e-144
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 1


		  
Query: 51  MAVPLVQTISSLQSTHLKSYNHSPFAVSSTNITSTLLPKSLLPDFPIGHTLTLKYFLNSK 110
           MAVPLVQTISSLQSTHLKSYNHSPFAVSSTNITSTLLPKSLLPDFPIGHTLTLKYFLNSK
Sbjct: 1   MAVPLVQTISSLQSTHLKSYNHSPFAVSSTNITSTLLPKSLLPDFPIGHTLTLKYFLNSK 60

Query: 111 SCCKINKFNNTASICASLLENPILWAGRICVFYALLKTGLAGSQSNPILSGSEAGMSDDG 170
           SCCKINKFNNTASICASLLENPILWAGRICVFYALLKTGLAGSQSNPILSGSEAGMSDDG
Sbjct: 61  SCCKINKFNNTASICASLLENPILWAGRICVFYALLKTGLAGSQSNPILSGSEAGMSDDG 120

Query: 171 ADLGFSKWLDKFQKNPDKEAADKRKLVSKWHPTTKGTLKRNYRIPSKPEGRRLLKAIASL 230
           ADLGFSKWLDKFQKNPDKEAADKRKLVSKWHPTTKGTLKRNYRIPSKPEGRRLLKAIASL
Sbjct: 121 ADLGFSKWLDKFQKNPDKEAADKRKLVSKWHPTTKGTLKRNYRIPSKPEGRRLLKAIASL 180

Query: 231 LSEDDHFVDVTSHKGCQIRRESAHGESVCCNNVRALFDELPTPHIIVEITPFPAGPLTER 290
           LSEDDHFVDVTSHKGCQIRRESAHGESVCCNNVRALFDELPTPHIIVEITPFPAGPLTER
Sbjct: 181 LSEDDHFVDVTSHKGCQIRRESAHGESVCCNNVRALFDELPTPHIIVEITPFPAGPLTER 240

Query: 291 DYAKAEKVEKVLRSSPSV 309
           DYAKAEKVEKVLRSSPSV
Sbjct: 241 DYAKAEKVEKVLRSSPSV 258

[Close]

BLAST of Spo00680.1 vs. NCBI nr
Match: gi|731325440|ref|XP_010673517.1| (PREDICTED: uncharacterized protein LOC104889878 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 421.8 bits (1083), Expect = 1.000e-114
Identity = 215/268 (80.22%), Postives = 235/268 (87.69%), Query Frame = 1


		  
Query: 51  MAVPLVQTISSLQS--------THLKSYNHSPFAVSSTNITSTLLPKSLLPDFPIGHTLT 110
           M + LVQ+ S+ QS        TH K YNH+PFAV++T   +TLLPK+LLPDFPI  TLT
Sbjct: 1   MPLNLVQSTSTFQSSLQKTATITHFKLYNHNPFAVTTT---TTLLPKTLLPDFPIKPTLT 60

Query: 111 LKYFLNSKSCCKINKF--NNTASICASLLENPILWAGRICVFYALLKTGLAGSQSNPILS 170
           LKYFLNS++ CK N    +NT+SI ASLLENPILWAGRICVFYALLK GLAGSQSNPILS
Sbjct: 61  LKYFLNSRAYCKKNYLGHSNTSSISASLLENPILWAGRICVFYALLKAGLAGSQSNPILS 120

Query: 171 GSEAGMSDDGADLGFSKWLDKFQKNPDKEAADKRKLVSKWHPTTKGTLKRNYRIPSKPEG 230
              AG+S D ADLGFSKWL+KFQKNPDKEAADKRKLVSKWHPTTKGTL+RNYRIPSKPEG
Sbjct: 121 DLGAGISQDDADLGFSKWLEKFQKNPDKEAADKRKLVSKWHPTTKGTLRRNYRIPSKPEG 180

Query: 231 RRLLKAIASLLSEDDHFVDVTSHKGCQIRRESAHGESVCCNNVRALFDELPTPHIIVEIT 290
           RRLLKAIASLLSEDDHF+D TSHKGCQ+RRESAHGESVCCNNVRALFDELPTPH+IVEIT
Sbjct: 181 RRLLKAIASLLSEDDHFIDATSHKGCQVRRESAHGESVCCNNVRALFDELPTPHLIVEIT 240

Query: 291 PFPAGPLTERDYAKAEKVEKVLRSSPSV 309
           PFPAGPLTE+DYAKAEK+EKVLRSSPSV
Sbjct: 241 PFPAGPLTEKDYAKAEKLEKVLRSSPSV 265

[Close]

BLAST of Spo00680.1 vs. NCBI nr
Match: gi|731393137|ref|XP_010651351.1| (PREDICTED: uncharacterized protein LOC100250156 [Vitis vinifera])

HSP 1 Score: 330.9 bits (847), Expect = 2.400e-87
Identity = 168/226 (74.34%), Postives = 188/226 (83.19%), Query Frame = 1


		  
Query: 84  STLLPKSLLPDFPIGHTLTLKYFLNSKSCCKINKFNNTASICASLLENPILWAGRICVFY 143
           +TLLPK+ LP F I  T TL Y L S++         T S  ASLLE P+LWA RICVFY
Sbjct: 59  TTLLPKTFLPGFGISPTKTLVY-LRSRT--------PTGSTHASLLEAPVLWASRICVFY 118

Query: 144 ALLKTGLAGSQSNPILSGSEAGMSDDGA-DLGFSKWLDKFQKNPDKEAADKRKLVSKWHP 203
           ALLK GLAGSQ+NP +S  E+  + DGA DLGFSKWL+  Q+NP+KEA+DKRKLVSKWHP
Sbjct: 119 ALLKAGLAGSQANPFVSDLESDGNGDGAGDLGFSKWLESLQRNPEKEASDKRKLVSKWHP 178

Query: 204 TTKGTLKRNYRIPSKPEGRRLLKAIASLLSEDDHFVDVTSHKGCQIRRESAHGESVCCNN 263
           TTKGTL+RNYR+PSK EGRRLLKAIASLLS+DDHF+D +SHKGCQIRRESAHGESVCCNN
Sbjct: 179 TTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDASSHKGCQIRRESAHGESVCCNN 238

Query: 264 VRALFDELPTPHIIVEITPFPAGPLTERDYAKAEKVEKVLRSSPSV 309
           VRALFDELPTPH+IVEITPFPAGPLTE DY KAEK+EKVLRS PSV
Sbjct: 239 VRALFDELPTPHLIVEITPFPAGPLTENDYVKAEKLEKVLRSGPSV 275

[Close]

BLAST of Spo00680.1 vs. NCBI nr
Match: gi|590582888|ref|XP_007014748.1| (6,7-dimethyl-8-ribityllumazine synthase [Theobroma cacao])

HSP 1 Score: 324.3 bits (830), Expect = 2.300e-85
Identity = 169/253 (66.80%), Postives = 198/253 (78.26%), Query Frame = 1


		  
Query: 59  ISSLQSTHLKSYN-HSPFAVSSTNIT-STLLPKSLLPDFPIGHTLTLKYFLNSKSCCKIN 118
           +S +QS+ + S   HS    +   +  S LLPK+L P F    T        SK+  K++
Sbjct: 3   LSLVQSSFISSSTFHSKIHTNLNPLKPSFLLPKTLFPIFNTQPT--------SKTLLKLS 62

Query: 119 KFNNTASICASLLENPILWAGRICVFYALLKTGLAGSQSNPILSGSEAGMS-DDGADLGF 178
             N T  ICASLLE P+LWAGR+C++YALLK GLAGSQ+NP++SG E+G +  +  DLGF
Sbjct: 63  PRNATG-ICASLLEAPVLWAGRLCIYYALLKAGLAGSQANPLVSGLESGGTIGESGDLGF 122

Query: 179 SKWLDKFQKNPDKEAADKRKLVSKWHPTTKGTLKRNYRIPSKPEGRRLLKAIASLLSEDD 238
           SKWL+  Q  PDKEAADKRKLVSKWHPTTKGTLKRNYR+PSK EGRRLLKA+A LLS+DD
Sbjct: 123 SKWLENIQGKPDKEAADKRKLVSKWHPTTKGTLKRNYRVPSKSEGRRLLKAVAFLLSDDD 182

Query: 239 HFVDVTSHKGCQIRRESAHGESVCCNNVRALFDELPTPHIIVEITPFPAGPLTERDYAKA 298
           HF D TSHKGCQIRRESAHGESVCCNNVRALFDELPTPH+ VEITPFPAGPLTE+DY KA
Sbjct: 183 HFTDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLTEKDYVKA 242

Query: 299 EKVEKVLRSSPSV 309
           EK+E+VLRS+PSV
Sbjct: 243 EKLERVLRSAPSV 246

[Close]

BLAST of Spo00680.1 vs. NCBI nr
Match: gi|698511961|ref|XP_009801021.1| (PREDICTED: uncharacterized protein LOC104246831 [Nicotiana sylvestris])

HSP 1 Score: 323.6 bits (828), Expect = 3.900e-85
Identity = 165/251 (65.74%), Postives = 192/251 (76.49%), Query Frame = 1


		  
Query: 64  STHLKSYNHSP------FAVSSTNITSTLLPKSLLPDFPIGHTLTLKYFLNSKSCCKINK 123
           +TH  +++  P      F  + T  TS LLPKS LP+          YF N ++   +  
Sbjct: 6   TTHSFTFSSQPISRNNLFFKNLTFFTSPLLPKSFLPNLDYKF-----YFGNKRNSLSVAS 65

Query: 124 FNNTASICASLLENPILWAGRICVFYALLKTGLAGSQSNPILSGSEAGMSDDGADLGFSK 183
                +I A+LLE P++WAGR+CVFYALLK GLAGS SNP++S  EA   D  ADLGF+K
Sbjct: 66  GRTKTTIDATLLEAPVIWAGRVCVFYALLKAGLAGSPSNPLVSDLEA---DGNADLGFAK 125

Query: 184 WLDKFQKNPDKEAADKRKLVSKWHPTTKGTLKRNYRIPSKPEGRRLLKAIASLLSEDDHF 243
           W ++ Q  P+KEA+D+RKLVSKWHPTTKGTL+RNYRIPSKPEGRRLLKAIASLLS+DDHF
Sbjct: 126 WFEELQSKPEKEASDRRKLVSKWHPTTKGTLRRNYRIPSKPEGRRLLKAIASLLSDDDHF 185

Query: 244 VDVTSHKGCQIRRESAHGESVCCNNVRALFDELPTPHIIVEITPFPAGPLTERDYAKAEK 303
            D TSHKGCQIRRESAHGESVCCNNVRALFDELPTPH+ VEITPFPAGPLTE DYAKAEK
Sbjct: 186 RDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLTENDYAKAEK 245

Query: 304 VEKVLRSSPSV 309
           +E+VLRS PSV
Sbjct: 246 LERVLRSGPSV 248

[Close]

BLAST of Spo00680.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RXR5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_016730 PE=4 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 2.600e-144
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 1


		  
Query: 51  MAVPLVQTISSLQSTHLKSYNHSPFAVSSTNITSTLLPKSLLPDFPIGHTLTLKYFLNSK 110
           MAVPLVQTISSLQSTHLKSYNHSPFAVSSTNITSTLLPKSLLPDFPIGHTLTLKYFLNSK
Sbjct: 1   MAVPLVQTISSLQSTHLKSYNHSPFAVSSTNITSTLLPKSLLPDFPIGHTLTLKYFLNSK 60

Query: 111 SCCKINKFNNTASICASLLENPILWAGRICVFYALLKTGLAGSQSNPILSGSEAGMSDDG 170
           SCCKINKFNNTASICASLLENPILWAGRICVFYALLKTGLAGSQSNPILSGSEAGMSDDG
Sbjct: 61  SCCKINKFNNTASICASLLENPILWAGRICVFYALLKTGLAGSQSNPILSGSEAGMSDDG 120

Query: 171 ADLGFSKWLDKFQKNPDKEAADKRKLVSKWHPTTKGTLKRNYRIPSKPEGRRLLKAIASL 230
           ADLGFSKWLDKFQKNPDKEAADKRKLVSKWHPTTKGTLKRNYRIPSKPEGRRLLKAIASL
Sbjct: 121 ADLGFSKWLDKFQKNPDKEAADKRKLVSKWHPTTKGTLKRNYRIPSKPEGRRLLKAIASL 180

Query: 231 LSEDDHFVDVTSHKGCQIRRESAHGESVCCNNVRALFDELPTPHIIVEITPFPAGPLTER 290
           LSEDDHFVDVTSHKGCQIRRESAHGESVCCNNVRALFDELPTPHIIVEITPFPAGPLTER
Sbjct: 181 LSEDDHFVDVTSHKGCQIRRESAHGESVCCNNVRALFDELPTPHIIVEITPFPAGPLTER 240

Query: 291 DYAKAEKVEKVLRSSPSV 309
           DYAKAEKVEKVLRSSPSV
Sbjct: 241 DYAKAEKVEKVLRSSPSV 258

[Close]

BLAST of Spo00680.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CQR9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g071380 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 7.300e-115
Identity = 215/268 (80.22%), Postives = 235/268 (87.69%), Query Frame = 1


		  
Query: 51  MAVPLVQTISSLQS--------THLKSYNHSPFAVSSTNITSTLLPKSLLPDFPIGHTLT 110
           M + LVQ+ S+ QS        TH K YNH+PFAV++T   +TLLPK+LLPDFPI  TLT
Sbjct: 1   MPLNLVQSTSTFQSSLQKTATITHFKLYNHNPFAVTTT---TTLLPKTLLPDFPIKPTLT 60

Query: 111 LKYFLNSKSCCKINKF--NNTASICASLLENPILWAGRICVFYALLKTGLAGSQSNPILS 170
           LKYFLNS++ CK N    +NT+SI ASLLENPILWAGRICVFYALLK GLAGSQSNPILS
Sbjct: 61  LKYFLNSRAYCKKNYLGHSNTSSISASLLENPILWAGRICVFYALLKAGLAGSQSNPILS 120

Query: 171 GSEAGMSDDGADLGFSKWLDKFQKNPDKEAADKRKLVSKWHPTTKGTLKRNYRIPSKPEG 230
              AG+S D ADLGFSKWL+KFQKNPDKEAADKRKLVSKWHPTTKGTL+RNYRIPSKPEG
Sbjct: 121 DLGAGISQDDADLGFSKWLEKFQKNPDKEAADKRKLVSKWHPTTKGTLRRNYRIPSKPEG 180

Query: 231 RRLLKAIASLLSEDDHFVDVTSHKGCQIRRESAHGESVCCNNVRALFDELPTPHIIVEIT 290
           RRLLKAIASLLSEDDHF+D TSHKGCQ+RRESAHGESVCCNNVRALFDELPTPH+IVEIT
Sbjct: 181 RRLLKAIASLLSEDDHFIDATSHKGCQVRRESAHGESVCCNNVRALFDELPTPHLIVEIT 240

Query: 291 PFPAGPLTERDYAKAEKVEKVLRSSPSV 309
           PFPAGPLTE+DYAKAEK+EKVLRSSPSV
Sbjct: 241 PFPAGPLTEKDYAKAEKLEKVLRSSPSV 265

[Close]

BLAST of Spo00680.1 vs. UniProtKB/TrEMBL
Match: A0A061GT71_THECC (6,7-dimethyl-8-ribityllumazine synthase OS=Theobroma cacao GN=TCM_040239 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.600e-85
Identity = 169/253 (66.80%), Postives = 198/253 (78.26%), Query Frame = 1


		  
Query: 59  ISSLQSTHLKSYN-HSPFAVSSTNIT-STLLPKSLLPDFPIGHTLTLKYFLNSKSCCKIN 118
           +S +QS+ + S   HS    +   +  S LLPK+L P F    T        SK+  K++
Sbjct: 3   LSLVQSSFISSSTFHSKIHTNLNPLKPSFLLPKTLFPIFNTQPT--------SKTLLKLS 62

Query: 119 KFNNTASICASLLENPILWAGRICVFYALLKTGLAGSQSNPILSGSEAGMS-DDGADLGF 178
             N T  ICASLLE P+LWAGR+C++YALLK GLAGSQ+NP++SG E+G +  +  DLGF
Sbjct: 63  PRNATG-ICASLLEAPVLWAGRLCIYYALLKAGLAGSQANPLVSGLESGGTIGESGDLGF 122

Query: 179 SKWLDKFQKNPDKEAADKRKLVSKWHPTTKGTLKRNYRIPSKPEGRRLLKAIASLLSEDD 238
           SKWL+  Q  PDKEAADKRKLVSKWHPTTKGTLKRNYR+PSK EGRRLLKA+A LLS+DD
Sbjct: 123 SKWLENIQGKPDKEAADKRKLVSKWHPTTKGTLKRNYRVPSKSEGRRLLKAVAFLLSDDD 182

Query: 239 HFVDVTSHKGCQIRRESAHGESVCCNNVRALFDELPTPHIIVEITPFPAGPLTERDYAKA 298
           HF D TSHKGCQIRRESAHGESVCCNNVRALFDELPTPH+ VEITPFPAGPLTE+DY KA
Sbjct: 183 HFTDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLTVEITPFPAGPLTEKDYVKA 242

Query: 299 EKVEKVLRSSPSV 309
           EK+E+VLRS+PSV
Sbjct: 243 EKLERVLRSAPSV 246

[Close]

BLAST of Spo00680.1 vs. UniProtKB/TrEMBL
Match: D7SLG0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g00940 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 6.000e-85
Identity = 166/235 (70.64%), Postives = 190/235 (80.85%), Query Frame = 1


		  
Query: 75  FAVSSTNITSTLLPKSLLPDFPIGHTLTLKYFLNSKSCCKINKFNNTASICASLLENPIL 134
           F  S +++ S+   ++ LP F I  T TL Y L S++         T S  ASLLE P+L
Sbjct: 8   FITSPSSVNSS---QTFLPGFGISPTKTLVY-LRSRT--------PTGSTHASLLEAPVL 67

Query: 135 WAGRICVFYALLKTGLAGSQSNPILSGSEAGMSDDGA-DLGFSKWLDKFQKNPDKEAADK 194
           WA RICVFYALLK GLAGSQ+NP +S  E+  + DGA DLGFSKWL+  Q+NP+KEA+DK
Sbjct: 68  WASRICVFYALLKAGLAGSQANPFVSDLESDGNGDGAGDLGFSKWLESLQRNPEKEASDK 127

Query: 195 RKLVSKWHPTTKGTLKRNYRIPSKPEGRRLLKAIASLLSEDDHFVDVTSHKGCQIRRESA 254
           RKLVSKWHPTTKGTL+RNYR+PSK EGRRLLKAIASLLS+DDHF+D +SHKGCQIRRESA
Sbjct: 128 RKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDASSHKGCQIRRESA 187

Query: 255 HGESVCCNNVRALFDELPTPHIIVEITPFPAGPLTERDYAKAEKVEKVLRSSPSV 309
           HGESVCCNNVRALFDELPTPH+IVEITPFPAGPLTE DY KAEK+EKVLRS PSV
Sbjct: 188 HGESVCCNNVRALFDELPTPHLIVEITPFPAGPLTENDYVKAEKLEKVLRSGPSV 230

[Close]

BLAST of Spo00680.1 vs. UniProtKB/TrEMBL
Match: A0A067FIF4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025764mg PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 1.300e-84
Identity = 164/244 (67.21%), Postives = 192/244 (78.69%), Query Frame = 1


		  
Query: 69  SYNHSPFAVSSTNITSTLLPKSLLPD--FPIGHTLTLKYFLNSKSCCKINKFNNTASICA 128
           ++  SPF  S  ++ + L P S L    F    T TL+  L S       K   T++I A
Sbjct: 6   NFTASPFR-SQNHLFNNLSPTSFLHKSLFLSRPTKTLQNLLFSNPKSSQKKLLRTSTINA 65

Query: 129 SLLENPILWAGRICVFYALLKTGLAGSQSNPILSGSEAG--MSDDGADLGFSKWLDKFQK 188
           SLLE P+LWAGR+CV+YALLK GLAGSQ+NP++S  E+G     +GADLGFSKWL+  + 
Sbjct: 66  SLLEAPLLWAGRLCVYYALLKAGLAGSQANPLVSDLESGGVTGSEGADLGFSKWLENIKG 125

Query: 189 NPDKEAADKRKLVSKWHPTTKGTLKRNYRIPSKPEGRRLLKAIASLLSEDDHFVDVTSHK 248
            PDKEAADKRKLVSKWHPTTKGTL+RNYR+PSK EGRRLLKAIASLLS+DDHF D TSHK
Sbjct: 126 KPDKEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFTDATSHK 185

Query: 249 GCQIRRESAHGESVCCNNVRALFDELPTPHIIVEITPFPAGPLTERDYAKAEKVEKVLRS 308
           GCQIRRE+AHGESVCCNNVRALFDELPTPH++VEITPFPAGPLTE+DY KAEK+E+VLRS
Sbjct: 186 GCQIRRENAHGESVCCNNVRALFDELPTPHLVVEITPFPAGPLTEKDYVKAEKLERVLRS 245

[Close]

BLAST of Spo00680.1 vs. TAIR (Arabidopsis)
Match: AT3G32930.1 (unknown protein)

HSP 1 Score: 308.5 bits (789), Expect = 4.500e-84
Identity = 169/263 (64.26%), Postives = 199/263 (75.67%), Query Frame = 1


		  
Query: 51  MAVPLVQTISSLQSTHLKSYNHSPFAVSSTNITSTLLPKSLLPDFPIGHTLTLKYFLNSK 110
           M + LVQ +SS+  ++ +S +  P  +S++N +  LL KS+ P    G  LTL       
Sbjct: 1   MQLSLVQ-VSSV--SNFRSQSTIP-TLSNSNPSCLLLQKSIFP----GSKLTLHRIF--- 60

Query: 111 SCCKINKFNNTASICASLLENPILWAGRICVFYALLKTGLAGSQSNPILSGSEAG----M 170
              +  K  +  S  ASLLE PILWAGRICVFYAL+K G AGS+SNPI+SG + G     
Sbjct: 61  ---RYPKKISNGSTRASLLETPILWAGRICVFYALVKAGFAGSKSNPIVSGLDTGGVDVE 120

Query: 171 SDDGADLGFSKWLDKFQKN-PDKEAADKRKLVSKWHPTTKGTLKRNYRIPSKPEGRRLLK 230
            DDGADLGFSKWL   + N PDK+AADKRKLVSKWHPTTKGTL+RNYRIPSK EG RLLK
Sbjct: 121 YDDGADLGFSKWLQNIKGNKPDKDAADKRKLVSKWHPTTKGTLRRNYRIPSKAEGNRLLK 180

Query: 231 AIASLLSEDDHFVDVTSHKGCQIRRESAHGESVCCNNVRALFDELPTPHIIVEITPFPAG 290
           AIASLLS+DDHF D TSHKGCQIRRESAHG+SVCCNNVRALFDELPTPH++VEITPFPAG
Sbjct: 181 AIASLLSDDDHFRDATSHKGCQIRRESAHGQSVCCNNVRALFDELPTPHLVVEITPFPAG 240

Query: 291 PLTERDYAKAEKVEKVLRSSPSV 309
           PLTE DY KAEK+E++LRS  ++
Sbjct: 241 PLTENDYLKAEKLERILRSGANI 249

The following BLAST results are available for this feature:

BLAST of Spo00680.1 vs. NCBI nr
BLAST of Spo00680.1 vs. UniProtKB/TrEMBL
BLAST of Spo00680.1 vs. ExPASy Swiss-Prot
BLAST of Spo00680.1 vs. TAIR (Arabidopsis)

BLAST of Spo00680.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902236300\|gb\|KNA24316.1\|	3.7e-144	100.	hypothetical protein SOVF_0167...	[more]
gi\|731325440\|ref\|XP_010673517.1\|	1.0e-114	80.2	PREDICTED: uncharacterized pro...	[more]
gi\|731393137\|ref\|XP_010651351.1\|	2.4e-87	74.3	PREDICTED: uncharacterized pro...	[more]
gi\|590582888\|ref\|XP_007014748.1\|	2.3e-85	66.8	6,7-dimethyl-8-ribityllumazine...	[more]
gi\|698511961\|ref\|XP_009801021.1\|	3.9e-85	65.7	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo00680.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RXR5_SPIOL	2.6e-144	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CQR9_BETVU	7.3e-115	80.2	Uncharacterized protein OS=Bet...	[more]
A0A061GT71_THECC	1.6e-85	66.8	6,7-dimethyl-8-ribityllumazine...	[more]
D7SLG0_VITVI	6.0e-85	70.6	Putative uncharacterized prote...	[more]
A0A067FIF4_CITSI	1.3e-84	67.2	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo00680.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo00680.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G32930.1	4.5e-84	64.2	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37229	FAMILY NOT NAMED	coord: 121..308 score: 5.4E
None	No IPR available	PANTHER	PTHR37229:SF1	SUBFAMILY NOT NAMED	coord: 121..308 score: 5.4E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009941	chloroplast envelope