Spo00718.1 (mRNA) | SpinachBase

Overview


Name	Spo00718.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	UDP-D-glucose/UDP-D-galactose 4-epimerase
Location	chr6 : 38546960 .. 38548243 (-)
Sequence length	441

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCGTCTTCATCGATTAGCGGATACGAGGTACCATGGGTGGAGAAGTACAGACCCAACAAGGTTGCTGACATCGTCGGCAACGAAGATGCTGTCTCTCGCCTCCAAGTCATCGCTCGCGACGGCAACATGCCCAATCTCATCTTGGCCGTACTTTCTTTTTTCCCTCCTTCAATCTCTCAAAAATTACTGATTTTTTTGACATTTTCATGTCTTCAATTTGTTAGATTTTGTTGAAAGCCACTGGTATTTTAACGAGCTTTGCATTTCGTTGTTTTCCCGCAATTTTTGTACCTGTGTCTTTTTGTGAGAATTTTCTCGAATTGTAGCTTTCTGTTGCTGATTTAAAGTACTACACAACTGGGTTTCTAATTTTCAGTGCCTTTTCCTATGTTTTTGTTTATTTGCTGGTGCTTTGGTTGAACCCTAATGAGTATTGTACTTTAACATTTTCGAAATTGAACAGTTTATTTGTTGAAATATTGGGATATTTGTTGTGGAAATGGTTGTTGAAAGCGAATTATAAAGCGAATTATATAGCGAACTATGTTACACTGGTTTCAATTATAAAAAAACCAATAAGAAGATTACATATATTTAGTAAATGCTGACACACCAAGGAAATCTATTTGCAGCCTGCGAAGTCTACAACTTGGGATCTGGTAAGGGTACATCAGTCTTGGAGATGGTAGCAGCATTTGAGAAAGCATCAGGAAAGGTAAAGACCGCTCTACCTTTTTCTCAATGTAACTTAGGGTTACCTGTATGCTTCGTATATATTGGTTCAAAAATCATGGATTTAGTCTTGCTATTGGAGTATTTTGTTATGTCTTTTTCGATCGACCATGTGTTCTTCCCTAATGCCCAAAGTGACATAAACTGACATGTTTTTAATTGTAGGCTTTTATGCCTTTTTTTTGGGTCATTTTACATCCATTTTGTAGGAATTTTTTTTTTAGGATATAGTTGGAATCTTGGTGTAATAATATATATTACTATCTTCTCAGACCATTCCTTTTGAAATGGCTGGGCGACGCTCTGGTGATGCTCAGATTGTGTATGCCTCAACAAAAAAAGCGGAACGAGAAGTAAATTGGAAGTAAGTATCTGACTGATTCAATTAAATTCATCAAGTGATTCAGTTAAATTCATCAACGGTATCTGACAATGACATTGTGGAAATGCAGGGCCAAATTTGGGATCAATGAGATGTGCCATGATCAATGGAACTGGGCTAACAAGAACCCTTATGGTTACGGCTCATCAGATAGCAAGAACTGA

mRNA sequence

ATGGCGTCGTCTTCATCGATTAGCGGATACGAGGTACCATGGGTGGAGAAGTACAGACCCAACAAGGTTGCTGACATCGTCGGCAACGAAGATGCTGTCTCTCGCCTCCAAGTCATCGCTCGCGACGGCAACATGCCCAATCTCATCTTGGCCATTTTGTTGAAAGCCACTGCCTGCGAAGTCTACAACTTGGGATCTGGTAAGGGTACATCAGTCTTGGAGATGGTAGCAGCATTTGAGAAAGCATCAGGAAAGACCATTCCTTTTGAAATGGCTGGGCGACGCTCTGGTGATGCTCAGATTGTGTATGCCTCAACAAAAAAAGCGGAACGAGAAGTAAATTGGAAGGCCAAATTTGGGATCAATGAGATGTGCCATGATCAATGGAACTGGGCTAACAAGAACCCTTATGGTTACGGCTCATCAGATAGCAAGAACTGA

Coding sequence (CDS)

ATGGCGTCGTCTTCATCGATTAGCGGATACGAGGTACCATGGGTGGAGAAGTACAGACCCAACAAGGTTGCTGACATCGTCGGCAACGAAGATGCTGTCTCTCGCCTCCAAGTCATCGCTCGCGACGGCAACATGCCCAATCTCATCTTGGCCATTTTGTTGAAAGCCACTGCCTGCGAAGTCTACAACTTGGGATCTGGTAAGGGTACATCAGTCTTGGAGATGGTAGCAGCATTTGAGAAAGCATCAGGAAAGACCATTCCTTTTGAAATGGCTGGGCGACGCTCTGGTGATGCTCAGATTGTGTATGCCTCAACAAAAAAAGCGGAACGAGAAGTAAATTGGAAGGCCAAATTTGGGATCAATGAGATGTGCCATGATCAATGGAACTGGGCTAACAAGAACCCTTATGGTTACGGCTCATCAGATAGCAAGAACTGA

Protein sequence

MASSSSISGYEVPWVEKYRPNKVADIVGNEDAVSRLQVIARDGNMPNLILAILLKATACEVYNLGSGKGTSVLEMVAAFEKASGKTIPFEMAGRRSGDAQIVYASTKKAEREVNWKAKFGINEMCHDQWNWANKNPYGYGSSDSKN

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo00718	Spo00718	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo00718.1	Spo00718.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00718.1.CDS.5	Spo00718.1.CDS.5	CDS
Spo00718.1.CDS.4	Spo00718.1.CDS.4	CDS
Spo00718.1.CDS.3	Spo00718.1.CDS.3	CDS
Spo00718.1.CDS.2	Spo00718.1.CDS.2	CDS
Spo00718.1.CDS.1	Spo00718.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00718.1.exon.5	Spo00718.1.exon.5	exon
Spo00718.1.exon.4	Spo00718.1.exon.4	exon
Spo00718.1.exon.3	Spo00718.1.exon.3	exon
Spo00718.1.exon.2	Spo00718.1.exon.2	exon
Spo00718.1.exon.1	Spo00718.1.exon.1	exon

Homology

[Close]

BLAST of Spo00718.1 vs. NCBI nr
Match: gi|902186286|gb|KNA10659.1| (hypothetical protein SOVF_142380 [Spinacia oleracea])

HSP 1 Score: 172.9 bits (437), Expect = 4.000e-40
Identity = 81/89 (91.01%), Postives = 87/89 (97.75%), Query Frame = 1

		  
Query: 58  ACEVYNLGSGKGTSVLEMVAAFEKASGKTIPFEMAGRRSGDAQIVYASTKKAEREVNWKA 117
           ACEVYNLGSGKGTSVLEMVAAFEKASGKTIP EMAGRR+GDA+IVYAST+KAERE+NWKA
Sbjct: 260 ACEVYNLGSGKGTSVLEMVAAFEKASGKTIPLEMAGRRAGDAEIVYASTEKAERELNWKA 319

Query: 118 KFGINEMCHDQWNWANKNPYGYGSSDSKN 147
           KFGINEMC DQWNWA+KNPYGYGSSDS+N
Sbjct: 320 KFGINEMCRDQWNWASKNPYGYGSSDSEN 348

[Close]

BLAST of Spo00718.1 vs. NCBI nr
Match: gi|720043835|ref|XP_010269690.1| (PREDICTED: UDP-glucose 4-epimerase GEPI48 [Nelumbo nucifera])

HSP 1 Score: 157.1 bits (396), Expect = 2.300e-35
Identity = 73/86 (84.88%), Postives = 79/86 (91.86%), Query Frame = 1

		  
Query: 59  CEVYNLGSGKGTSVLEMVAAFEKASGKTIPFEMAGRRSGDAQIVYASTKKAEREVNWKAK 118
           CEVYNLG+GKGTSVLEMVAAFEKASGK IP  MAGRR GDA+IVYAST+KAERE+NWKAK
Sbjct: 261 CEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVMAGRRPGDAEIVYASTEKAERELNWKAK 320

Query: 119 FGINEMCHDQWNWANKNPYGYGSSDS 145
           +GI EMC DQWNWA+KNPYGYGS DS
Sbjct: 321 YGIEEMCRDQWNWASKNPYGYGSPDS 346

[Close]

BLAST of Spo00718.1 vs. NCBI nr
Match: gi|223549871|gb|EEF51359.1| (UDP-glucose 4-epimerase, putative [Ricinus communis])

HSP 1 Score: 156.0 bits (393), Expect = 5.100e-35
Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 1

		  
Query: 59  CEVYNLGSGKGTSVLEMVAAFEKASGKTIPFEMAGRRSGDAQIVYASTKKAEREVNWKAK 118
           CEVYNLG+GKGTSVLEMV AFEKASGK IP  MAGRR GDA+IVYAST KAERE+NWKAK
Sbjct: 210 CEVYNLGTGKGTSVLEMVTAFEKASGKKIPLVMAGRRPGDAEIVYASTDKAERELNWKAK 269

Query: 119 FGINEMCHDQWNWANKNPYGYGSSDS 145
           FGI+EMC DQWNWA+KNPYGYGS+D+
Sbjct: 270 FGIDEMCRDQWNWASKNPYGYGSADT 295

[Close]

BLAST of Spo00718.1 vs. NCBI nr
Match: gi|1000983236|ref|XP_002509972.2| (PREDICTED: UDP-glucose 4-epimerase 2 [Ricinus communis])

HSP 1 Score: 156.0 bits (393), Expect = 5.100e-35
Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 1

		  
Query: 59  CEVYNLGSGKGTSVLEMVAAFEKASGKTIPFEMAGRRSGDAQIVYASTKKAEREVNWKAK 118
           CEVYNLG+GKGTSVLEMV AFEKASGK IP  MAGRR GDA+IVYAST KAERE+NWKAK
Sbjct: 325 CEVYNLGTGKGTSVLEMVTAFEKASGKKIPLVMAGRRPGDAEIVYASTDKAERELNWKAK 384

Query: 119 FGINEMCHDQWNWANKNPYGYGSSDS 145
           FGI+EMC DQWNWA+KNPYGYGS+D+
Sbjct: 385 FGIDEMCRDQWNWASKNPYGYGSADT 410

[Close]

BLAST of Spo00718.1 vs. NCBI nr
Match: gi|1012129716|ref|XP_015964634.1| (PREDICTED: UDP-glucose 4-epimerase GEPI48 [Arachis duranensis])

HSP 1 Score: 155.6 bits (392), Expect = 6.600e-35
Identity = 76/101 (75.25%), Postives = 85/101 (84.16%), Query Frame = 1

		  
Query: 50  LAILLKAT----ACEVYNLGSGKGTSVLEMVAAFEKASGKTIPFEMAGRRSGDAQIVYAS 109
           +A LLK       CEVYNLG+GKGTSVLEMV AFEKASGK IP  MAGRR+GDA+IVYAS
Sbjct: 303 IAALLKLDEPNIGCEVYNLGTGKGTSVLEMVKAFEKASGKKIPLVMAGRRAGDAEIVYAS 362

Query: 110 TKKAEREVNWKAKFGINEMCHDQWNWANKNPYGYGSSDSKN 147
           T+KAERE+ WKAK+GI EMC DQWNWA+KNPYGYGS DSK+
Sbjct: 363 TEKAERELKWKAKYGIEEMCRDQWNWASKNPYGYGSEDSKD 403

[Close]

BLAST of Spo00718.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QTS4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_142380 PE=3 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.800e-40
Identity = 81/89 (91.01%), Postives = 87/89 (97.75%), Query Frame = 1

		  
Query: 58  ACEVYNLGSGKGTSVLEMVAAFEKASGKTIPFEMAGRRSGDAQIVYASTKKAEREVNWKA 117
           ACEVYNLGSGKGTSVLEMVAAFEKASGKTIP EMAGRR+GDA+IVYAST+KAERE+NWKA
Sbjct: 260 ACEVYNLGSGKGTSVLEMVAAFEKASGKTIPLEMAGRRAGDAEIVYASTEKAERELNWKA 319

Query: 118 KFGINEMCHDQWNWANKNPYGYGSSDSKN 147
           KFGINEMC DQWNWA+KNPYGYGSSDS+N
Sbjct: 320 KFGINEMCRDQWNWASKNPYGYGSSDSEN 348

[Close]

BLAST of Spo00718.1 vs. UniProtKB/TrEMBL
Match: B9RCT8_RICCO (UDP-glucose 4-epimerase, putative OS=Ricinus communis GN=RCOM_1692150 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.500e-35
Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 1

		  
Query: 59  CEVYNLGSGKGTSVLEMVAAFEKASGKTIPFEMAGRRSGDAQIVYASTKKAEREVNWKAK 118
           CEVYNLG+GKGTSVLEMV AFEKASGK IP  MAGRR GDA+IVYAST KAERE+NWKAK
Sbjct: 210 CEVYNLGTGKGTSVLEMVTAFEKASGKKIPLVMAGRRPGDAEIVYASTDKAERELNWKAK 269

Query: 119 FGINEMCHDQWNWANKNPYGYGSSDS 145
           FGI+EMC DQWNWA+KNPYGYGS+D+
Sbjct: 270 FGIDEMCRDQWNWASKNPYGYGSADT 295

[Close]

BLAST of Spo00718.1 vs. UniProtKB/TrEMBL
Match: A0A0D2R407_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G132700 PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.000e-34
Identity = 70/86 (81.40%), Postives = 80/86 (93.02%), Query Frame = 1

		  
Query: 59  CEVYNLGSGKGTSVLEMVAAFEKASGKTIPFEMAGRRSGDAQIVYASTKKAEREVNWKAK 118
           CEVYNLG+GKGTSVLEMVAAFE+ASGK IP  MAGRR+GDA+IVYASTKKAERE+NW+A+
Sbjct: 261 CEVYNLGTGKGTSVLEMVAAFERASGKKIPLVMAGRRAGDAEIVYASTKKAERELNWRAR 320

Query: 119 FGINEMCHDQWNWANKNPYGYGSSDS 145
           +GI EMC DQWNWA+KNPYGYGS +S
Sbjct: 321 YGIEEMCRDQWNWASKNPYGYGSPES 346

[Close]

BLAST of Spo00718.1 vs. UniProtKB/TrEMBL
Match: B9GXJ3_POPTR (UDP-glucose 4-epimerase family protein OS=Populus trichocarpa GN=POPTR_0003s14080g PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.800e-34
Identity = 72/88 (81.82%), Postives = 79/88 (89.77%), Query Frame = 1

		  
Query: 59  CEVYNLGSGKGTSVLEMVAAFEKASGKTIPFEMAGRRSGDAQIVYASTKKAEREVNWKAK 118
           CEVYNLG+GKGTSVLEMVAAFEKAS K IP  MA RR GDA+IVYA+T+KAERE+NWKAK
Sbjct: 261 CEVYNLGTGKGTSVLEMVAAFEKASRKKIPLVMAARRPGDAEIVYAATEKAERELNWKAK 320

Query: 119 FGINEMCHDQWNWANKNPYGYGSSDSKN 147
           +GI+EMC DQWNWA KNPYGYGSSDS N
Sbjct: 321 YGIDEMCRDQWNWAGKNPYGYGSSDSTN 348

[Close]

BLAST of Spo00718.1 vs. UniProtKB/TrEMBL
Match: A0A061GDC4_THECC (UDP-D-glucose/UDP-D-galactose 4-epimerase 5 isoform 1 OS=Theobroma cacao GN=TCM_016477 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.300e-34
Identity = 72/88 (81.82%), Postives = 79/88 (89.77%), Query Frame = 1

		  
Query: 59  CEVYNLGSGKGTSVLEMVAAFEKASGKTIPFEMAGRRSGDAQIVYASTKKAEREVNWKAK 118
           CEVYNLG+GKGTSVLEMVAAFEKASGK IP  MAGRR GDA+IVYAST+KAERE+NW AK
Sbjct: 261 CEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVMAGRRPGDAEIVYASTEKAERELNWTAK 320

Query: 119 FGINEMCHDQWNWANKNPYGYGSSDSKN 147
           +GI EMC DQWNWA+KNPYGY SS+S N
Sbjct: 321 YGIEEMCRDQWNWASKNPYGYESSESTN 348

[Close]

BLAST of Spo00718.1 vs. ExPASy Swiss-Prot
Match: GALE2_CYATE (UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis tetragonoloba PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.300e-35
Identity = 71/89 (79.78%), Postives = 79/89 (88.76%), Query Frame = 1

		  
Query: 59  CEVYNLGSGKGTSVLEMVAAFEKASGKTIPFEMAGRRSGDAQIVYASTKKAEREVNWKAK 118
           CEVYNLG+GKGTSVLEMV AFE+ASGK IP  MAGRR GDA++VYAST KAERE+NWKAK
Sbjct: 262 CEVYNLGTGKGTSVLEMVKAFEQASGKKIPLVMAGRRPGDAEVVYASTNKAERELNWKAK 321

Query: 119 FGINEMCHDQWNWANKNPYGY-GSSDSKN 147
           +GI+EMC DQWNWA+KNPYGY GS DS N
Sbjct: 322 YGIDEMCRDQWNWASKNPYGYGGSEDSSN 350

[Close]

BLAST of Spo00718.1 vs. ExPASy Swiss-Prot
Match: UGE1_ORYSJ (UDP-glucose 4-epimerase 1 OS=Oryza sativa subsp. japonica GN=UGE-1 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 8.600e-35
Identity = 68/88 (77.27%), Postives = 75/88 (85.23%), Query Frame = 1

		  
Query: 59  CEVYNLGSGKGTSVLEMVAAFEKASGKTIPFEMAGRRSGDAQIVYASTKKAEREVNWKAK 118
           CEVYNLG+GKGTSVLEMVAAFEKASGK IP   AGRR GDA+IVYA T KAE+E+ WKAK
Sbjct: 267 CEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYAQTAKAEKELKWKAK 326

Query: 119 FGINEMCHDQWNWANKNPYGYGSSDSKN 147
           +G+ EMC D WNWA+KNPYGYGS DS N
Sbjct: 327 YGVEEMCRDLWNWASKNPYGYGSPDSSN 354

[Close]

BLAST of Spo00718.1 vs. ExPASy Swiss-Prot
Match: UGE2_ARATH (UDP-glucose 4-epimerase 2 OS=Arabidopsis thaliana GN=UGE2 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.200e-33
Identity = 67/87 (77.01%), Postives = 75/87 (86.21%), Query Frame = 1

		  
Query: 58  ACEVYNLGSGKGTSVLEMVAAFEKASGKTIPFEMAGRRSGDAQIVYASTKKAEREVNWKA 117
           +CEVYNLG+G GTSVLEMVAAFEKASGK IP  MAGRR GDA++VYAST+KAERE+NWKA
Sbjct: 260 SCEVYNLGTGNGTSVLEMVAAFEKASGKKIPLVMAGRRPGDAEVVYASTEKAERELNWKA 319

Query: 118 KFGINEMCHDQWNWANKNPYGYGSSDS 145
           K GI EMC D WNWA+ NPYGY SS +
Sbjct: 320 KNGIEEMCRDLWNWASNNPYGYNSSSN 346

[Close]

BLAST of Spo00718.1 vs. ExPASy Swiss-Prot
Match: UGE5_ARATH (UDP-glucose 4-epimerase 5 OS=Arabidopsis thaliana GN=UGE5 PE=1 SV=3)

HSP 1 Score: 139.4 bits (350), Expect = 3.100e-32
Identity = 64/88 (72.73%), Postives = 73/88 (82.95%), Query Frame = 1

		  
Query: 59  CEVYNLGSGKGTSVLEMVAAFEKASGKTIPFEMAGRRSGDAQIVYASTKKAEREVNWKAK 118
           CEVYNLG+G GTSVLEMV AFEKASGK IP  +AGRR GDA++VYAST++AE E+NWKAK
Sbjct: 262 CEVYNLGTGNGTSVLEMVDAFEKASGKKIPLVIAGRRPGDAEVVYASTERAESELNWKAK 321

Query: 119 FGINEMCHDQWNWANKNPYGYGSSDSKN 147
           +GI EMC D WNWA+ NPYGY SS   N
Sbjct: 322 YGIEEMCRDLWNWASNNPYGYDSSSEDN 349

[Close]

BLAST of Spo00718.1 vs. ExPASy Swiss-Prot
Match: UGE4_ARATH (UDP-glucose 4-epimerase 4 OS=Arabidopsis thaliana GN=UGE4 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.100e-32
Identity = 64/84 (76.19%), Postives = 71/84 (84.52%), Query Frame = 1

		  
Query: 59  CEVYNLGSGKGTSVLEMVAAFEKASGKTIPFEMAGRRSGDAQIVYASTKKAEREVNWKAK 118
           CEVYNLG+GKGT+VLEMV AFEKASG  IP    GRR GDA+ VYAST+KAERE+NWKA 
Sbjct: 261 CEVYNLGTGKGTTVLEMVDAFEKASGMKIPLVKVGRRPGDAETVYASTEKAERELNWKAN 320

Query: 119 FGINEMCHDQWNWANKNPYGYGSS 143
           FGI EMC DQWNWA+ NP+GYGSS
Sbjct: 321 FGIEEMCRDQWNWASNNPFGYGSS 344

[Close]

BLAST of Spo00718.1 vs. TAIR (Arabidopsis)
Match: AT4G23920.1 (UDP-D-glucose/UDP-D-galactose 4-epimerase 2)

HSP 1 Score: 144.1 bits (362), Expect = 7.000e-35
Identity = 67/87 (77.01%), Postives = 75/87 (86.21%), Query Frame = 1

		  
Query: 58  ACEVYNLGSGKGTSVLEMVAAFEKASGKTIPFEMAGRRSGDAQIVYASTKKAEREVNWKA 117
           +CEVYNLG+G GTSVLEMVAAFEKASGK IP  MAGRR GDA++VYAST+KAERE+NWKA
Sbjct: 260 SCEVYNLGTGNGTSVLEMVAAFEKASGKKIPLVMAGRRPGDAEVVYASTEKAERELNWKA 319

Query: 118 KFGINEMCHDQWNWANKNPYGYGSSDS 145
           K GI EMC D WNWA+ NPYGY SS +
Sbjct: 320 KNGIEEMCRDLWNWASNNPYGYNSSSN 346

[Close]

BLAST of Spo00718.1 vs. TAIR (Arabidopsis)
Match: AT4G10960.1 (UDP-D-glucose/UDP-D-galactose 4-epimerase 5)

HSP 1 Score: 139.4 bits (350), Expect = 1.700e-33
Identity = 64/88 (72.73%), Postives = 73/88 (82.95%), Query Frame = 1

		  
Query: 59  CEVYNLGSGKGTSVLEMVAAFEKASGKTIPFEMAGRRSGDAQIVYASTKKAEREVNWKAK 118
           CEVYNLG+G GTSVLEMV AFEKASGK IP  +AGRR GDA++VYAST++AE E+NWKAK
Sbjct: 262 CEVYNLGTGNGTSVLEMVDAFEKASGKKIPLVIAGRRPGDAEVVYASTERAESELNWKAK 321

Query: 119 FGINEMCHDQWNWANKNPYGYGSSDSKN 147
           +GI EMC D WNWA+ NPYGY SS   N
Sbjct: 322 YGIEEMCRDLWNWASNNPYGYDSSSEDN 349

[Close]

BLAST of Spo00718.1 vs. TAIR (Arabidopsis)
Match: AT1G64440.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 139.4 bits (350), Expect = 1.700e-33
Identity = 64/84 (76.19%), Postives = 71/84 (84.52%), Query Frame = 1

		  
Query: 59  CEVYNLGSGKGTSVLEMVAAFEKASGKTIPFEMAGRRSGDAQIVYASTKKAEREVNWKAK 118
           CEVYNLG+GKGT+VLEMV AFEKASG  IP    GRR GDA+ VYAST+KAERE+NWKA 
Sbjct: 261 CEVYNLGTGKGTTVLEMVDAFEKASGMKIPLVKVGRRPGDAETVYASTEKAERELNWKAN 320

Query: 119 FGINEMCHDQWNWANKNPYGYGSS 143
           FGI EMC DQWNWA+ NP+GYGSS
Sbjct: 321 FGIEEMCRDQWNWASNNPFGYGSS 344

[Close]

BLAST of Spo00718.1 vs. TAIR (Arabidopsis)
Match: AT1G12780.1 (UDP-D-glucose/UDP-D-galactose 4-epimerase 1)

HSP 1 Score: 131.7 bits (330), Expect = 3.600e-31
Identity = 61/98 (62.24%), Postives = 74/98 (75.51%), Query Frame = 1

		  
Query: 42  DGNMPNLILAILLKATACEVYNLGSGKGTSVLEMVAAFEKASGKTIPFEMAGRRSGDAQI 101
           DG++  L          C  YNLG+G+GTSVLEMVAAFEKASGK IP ++  RRSGDA  
Sbjct: 250 DGHIAALRKLFADPKIGCTAYNLGTGQGTSVLEMVAAFEKASGKKIPIKLCPRRSGDATA 309

Query: 102 VYASTKKAEREVNWKAKFGINEMCHDQWNWANKNPYGY 140
           VYAST+KAE+E+ WKAK+G++EMC DQW WAN NP+GY
Sbjct: 310 VYASTEKAEKELGWKAKYGVDEMCRDQWKWANNNPWGY 347

[Close]

BLAST of Spo00718.1 vs. TAIR (Arabidopsis)
Match: AT1G63180.1 (UDP-D-glucose/UDP-D-galactose 4-epimerase 3)

HSP 1 Score: 131.0 bits (328), Expect = 6.200e-31
Identity = 59/98 (60.20%), Postives = 76/98 (77.55%), Query Frame = 1

		  
Query: 42  DGNMPNLILAILLKATACEVYNLGSGKGTSVLEMVAAFEKASGKTIPFEMAGRRSGDAQI 101
           DG++  L          C  YNLG+G+GTSVLEMV++FEKASGK IP ++  RR+GDA  
Sbjct: 250 DGHVAALNKLFSDSKIGCTAYNLGTGQGTSVLEMVSSFEKASGKKIPIKLCPRRAGDATA 309

Query: 102 VYASTKKAEREVNWKAKFGINEMCHDQWNWANKNPYGY 140
           VYAST+KAE+E+ WKAK+G++EMC DQWNWANKNP+G+
Sbjct: 310 VYASTQKAEKELGWKAKYGVDEMCRDQWNWANKNPWGF 347

The following BLAST results are available for this feature:

BLAST of Spo00718.1 vs. NCBI nr
BLAST of Spo00718.1 vs. UniProtKB/TrEMBL
BLAST of Spo00718.1 vs. ExPASy Swiss-Prot
BLAST of Spo00718.1 vs. TAIR (Arabidopsis)

BLAST of Spo00718.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

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Match Name	E-value	Identity	Description
gi\|902186286\|gb\|KNA10659.1\|	4.0e-40	91.0	hypothetical protein SOVF_1423...	[more]
gi\|720043835\|ref\|XP_010269690.1\|	2.3e-35	84.8	PREDICTED: UDP-glucose 4-epime...	[more]
gi\|223549871\|gb\|EEF51359.1\|	5.1e-35	83.7	UDP-glucose 4-epimerase, putat...	[more]
gi\|1000983236\|ref\|XP_002509972.2\|	5.1e-35	83.7	PREDICTED: UDP-glucose 4-epime...	[more]
gi\|1012129716\|ref\|XP_015964634.1\|	6.6e-35	75.2	PREDICTED: UDP-glucose 4-epime...	[more]

BLAST of Spo00718.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9QTS4_SPIOL	2.8e-40	91.0	Uncharacterized protein OS=Spi...	[more]
B9RCT8_RICCO	3.5e-35	83.7	UDP-glucose 4-epimerase, putat...	[more]
A0A0D2R407_GOSRA	1.0e-34	81.4	Uncharacterized protein OS=Gos...	[more]
B9GXJ3_POPTR	1.8e-34	81.8	UDP-glucose 4-epimerase family...	[more]
A0A061GDC4_THECC	2.3e-34	81.8	UDP-D-glucose/UDP-D-galactose ...	[more]

BLAST of Spo00718.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
GALE2_CYATE	1.3e-35	79.7	UDP-glucose 4-epimerase GEPI48...	[more]
UGE1_ORYSJ	8.6e-35	77.2	UDP-glucose 4-epimerase 1 OS=O...	[more]
UGE2_ARATH	1.2e-33	77.0	UDP-glucose 4-epimerase 2 OS=A...	[more]
UGE5_ARATH	3.1e-32	72.7	UDP-glucose 4-epimerase 5 OS=A...	[more]
UGE4_ARATH	3.1e-32	76.1	UDP-glucose 4-epimerase 4 OS=A...	[more]

BLAST of Spo00718.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
AT4G23920.1	7.0e-35	77.0	UDP-D-glucose/UDP-D-galactose ...	[more]
AT4G10960.1	1.7e-33	72.7	UDP-D-glucose/UDP-D-galactose ...	[more]
AT1G64440.1	1.7e-33	76.1	NAD(P)-binding Rossmann-fold s...	[more]
AT1G12780.1	3.6e-31	62.2	UDP-D-glucose/UDP-D-galactose ...	[more]
AT1G63180.1	6.2e-31	60.2	UDP-D-glucose/UDP-D-galactose ...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016040	NAD(P)-binding domain	unknown	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 47..138 score: 1.17
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 13..43 score: 3.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 10..50 score: 1.1
None	No IPR available	GENE3D	3.90.25.10		coord: 44..141 score: 4.6
None	No IPR available	PANTHER	PTHR10366	NAD DEPENDENT EPIMERASE/DEHYDRATASE	coord: 50..143 score: 4.8
None	No IPR available	PANTHER	PTHR10366:SF308	SUBFAMILY NOT NAMED	coord: 50..143 score: 4.8

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006012	galactose metabolic process
biological_process	GO:0009225	nucleotide-sugar metabolic process
molecular_function	GO:0050662	coenzyme binding
molecular_function	GO:0003978	UDP-glucose 4-epimerase activity