Spo00900.1 (mRNA) | SpinachBase

Overview


Name	Spo00900.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_7
Location	chr1 : 7900785 .. 7905066 (+)
Sequence length	701

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCCGGATCCCGTTAACAAAACTCGCCTTAGAAGAGTGGGGTTAATTTAGTTACAGCATCAAAAAGAGGGGTGAAGACTGAAAAAAGGAGGAAGAAAGAAGCAAGCAAAAATGGCGTGGAGTGCGACAGCGATCGGATGTCTTCTCGGATTAGGCACCCAAATGTACTCAAACGCTCTTCGCAAACTCCCTTACATGCGTCGTAAGTCCTTTTACATTACCCAGATTTGTTCAAACTTTCAATTTTATACTTCTTCCCGATTCAATGAAAACCCTAATTTTAGCAATTTGGGCGTGTTTTAGATCCCTGGGAACATGTATTGGGAATGGGATTGGGAGCCGTATTTGTTAATCAGCTTGTCAAATGGGATGCCAAGCTTCAGGTAGACCTCGATAAGATGCTCGAGAAAGCCAAAGCCGCCAATGAGCGACGCTACGTTGGTGAGTTTTATACTTTTATTTATGTTATCGTCTCTTCTTCGATTTCTCGGTTTTATCTTGATTCTTAAACCTAATTTGTGTCGAAAGATTGGATCAGTGATTAAGGACCTCCATTTTTTTTGGGTTTACGCATTTCAAATTTTGTATCGATGTTGAATATTGTTGGAATTAACGGTTGGATTAATGTGATGCGTAATTGCAGATTAAATCTAAGGTTTATTTGTCGCGCTTGGACAGATTAGGGCTTTGTTAGAAAAAGATTTTTTTTTTTTTGGGTGCGAATTAGCCACAATGGCCATATAAATTGCAAATGGGAGCCCTATGGTACACAAACCTCTGTCTTAACCACTAGGCCAAGACAACCAAAGAAGATTTGTTGATGAATGAGTAGTGTTTTGACTGGCCCGGTTTGAGATTTATTAGAATTTTTTCCATTACGAAAAGCTGACTGCATCAATTCTAACTTCCTAAATTTAAGTCAAGTATGGTGATACGGGGCTGGATGAGTAGTGGGGAAGAAATGTAGAGTAATAGCAGCACTGATAGGTCTAATGGATTTTCAAGACCGCACAGGAAATTTTATTATCTTTTTGAGAAACCAATGTCTATATTCAGATTTGATAAGAAGTTAGGGAGTAAAGCATGATGAAGTAACATGGATATGTGGTCATGTTTTACGCCTGTATGGTTATATAGTACTATGTGGAGAAAGTAGGGTGGTTACCTCATAGTTCATAGGTGTGTGTCTCACTGTCTCCCTTAGTTTAAAAAGGCGCAAGGCGCACAAGGGTCATGGAGCCTAGGCGCAAGGCTCAGGCGCACGCCTTTTGGATACAACGCGCACATAATTTTCTAATAAACCTTAAAATTCGGTATAGAAAAAAATTAACACAATTTATCCTCAAAACAACATATTTCTATTGGAGTGCAATATTTTCTTGTCGGTTCATAAGCATTGCGTGATCCACGTCATCCTACTGCGCCTGAAGACCGAAGGTGCACAAGGCGCTGCGCCTTGAGCCTTACCTAAGGCGCACGAAGGCACGCGCCTGGTTGACATCAGTGAGCCTGGAGAGCTCAAAGGCTCACCTAGGCTCAGCCTTCGGCGCGCTTTTTTAAACTAAGCTGTCTCCTTAGTCTAGGGTTGCCATCATCTCCTTCCCGAAACTTCTGCAAATCTTTTGTGCTGTATTGATTTCTCCAAGTGTCTGTTTCCATATCCTTGTCTCCTCTTTGACATGGACAAACATGGTGAAATGCAGAGTTGCAAATGTTGGAACCCTTACGAGGCTGACAAAAAGAGAGGGGTTATTATTTAAAGAGATTAGCCAACAATTTCCAGCCTACTTTATCATCTAGATTGCTTTTTTCTGTCTGGTGTTCTAGGTTTCTTTTTCTGTCTGGCGTTTTTTATGCTATTTAACTATGTAAGATATATTTCCCACTATTTATGTTTTTGGAGTATGCCTTCCCTCCTTGCTACAGAATTCAAATGGGTCGGAACTGAGGTCTTAATGTGTGTTGTCATTAGTAGACATGAAATGTGCATCAACTGGTACTTATCTTGTTGTAGCTTACTATCTTTATCTACTGTGAAGTTCCCAATATGGCTATATGTTGGTGAAAGCAAAGTACTCCAGATTGATGATTATCTTGTCATGGAATACCTTTCCTACTGTAAAATATCTTTGAGGATTTAATCGAGATTTAATCATGTGTCTCGTTAGTAGACTTACATTATTTACATCCATTGGTATGGGAGTCCACTATCTTTACAATTGATAGGCCCATAGGTCAGTGCCAACAAAGATTTCCAGATCGAGAATAATAGGCTTCAAATGCTGCTGGGGTCTACAAATTTCTTCTCATCCCTGATTATCCAAAATTAATTTATTTTACGCTTATCATCATTATTGCTTTTATTAGGTGTTCTACAAAAAAAAAATGTTTTTTCAATAAATCACTTACAATAACAATCTTCTAATACTTTAGTTGATACATTATACTCTGAATGACTGCATCCTGCACTGCGCATTGTGTATTCAGCTGCTTTGTTATGGGAGTTGGCTCATGTTAGGTCAGTGTGACCATGCATATGGAATTTGGCTATCGGCTATCCAAGACACTTCAGGCTTGAAAGGGTCATTCTTGGGCTGGACAAGTTATTTACGGCTCTAGCTGTTGCCTTCATTATGTTTTACAATTGTGTTCTGCTCCTTTTTTCATCCATGTTCAGTTCAATTGACCTTTTAAGGTTGGGAGCCTTTTCGTATCTGGTACGCCTAGATACGATGTTGGGGAACATTATTTCTTTTCCCTTGTCTTGGCTGCCTTTGGAGGGAAAGTGAAGTAAACGAACTGAATGTATGACTGTTTGGCCGGAATGTTGGCCAAAGGTCCCATTTTTAATACAAACTTCTAATTCAAAGTACTTTTTGAGAAAATCAAACTAATAAGGTACTAGTTCACAAAGTGACCTAAAAACAAGAAACTTTTTGACAATTTTGCCTTTATTTTAACCAAAAAAAAAGTTCAAATATGTACTAGGAAAATGACTAATAGGGTTGATGAAGTTTCAGAACTTGGGGATCTGGATTGAAGGGAACCTTGTACACAAACTTTTTATGTGTTACAGTTTTAGGAAATTTAGATGAAATTCAAATATGTATTAGGAAAATGACTAATAGGGTTGATGAAGTTTCAGAACTTGGGGATCTGAATTGAAGAGAACCTTGTACACAAATTTTTTATGTGTTACAGTTTTAAGAAATTTAGATGAAATGTAAAATCATTTTAATACCATCTTATTTAATACTATAGGGGTGAAAGTAATGAGACAATTATCATAGATGTCATGATGATCAAGGATTGTGGTGACTAAACTAACTGATATAACTCATGAGTCATGGATCAGCAATAAGGTACCTCTTCACCTGCATAGAGACAGGTGGGCAAGGGGTTAAGCCTTTCATGTCAGATAGGCCTTTGCTGTTATACAGTGACGTTTTTCTCTTACCATGATCCCCTACCCCCTCCCCTTTTTAGTTGTGACTGGTGAGAAGGTAATGCCTTTCTTGGTTTACCAGTCTAATCAATAAAATATTAGAGCAGCTTCCAGCATTGACTTTGTAACATAACAAACTTAATTAAGAAAACCCAGTCCATAATTCCATATGAAGTTTGCAGATTTTCCTTGTAGTTACCTCATGAACGATGTTCTCTAATCTCTCGTTCTCATGTGGGGTTCTGGTAACATGCTAAAAAAGGGGAAGGACTTTTACAAGTAATTACTTGAAAGATAATTGGATAAATCTCTCAAGCTGATGGTGGTCATCATCTGAAATCTGGTTACCTTCACAGCTTCACCGCACTGTTCAATTTGTTCATTTATTTATGTAATTTTCAAAATAAAGGTTAAAGAAGGAAACAGAGGCATGTATTAGCTTGCATTTAACGTGTTTAATTTTCATCGTATTGTAGATGAAGACGAGTAGCTGCTCTATGTGGATACAGACCATGTTGATTTGGTTGGACGCTCAAGTGGTCGCAAATGTGTCCTCTTTGAATCAGTCCACATTTTGGTTGTAATTCTGAGTTTGGTTAGAACTTCTCCTGTTTGAACCATATTATGTTGTTTGTATCTATTGGAAAATTTCCGATTGCACATGCTGTTTGGCTGTTGCGAATAGTCTGTAATAATGAAGGTACTTTCGCTTGTAGCTGCTGCCAATTTTGGAAACATATGAAATGCAACTCTTCTATAAAAAGAAAAAAAAAGTGCAAATATTGGCTAGTTTGGGTCAGATTTTATGTCCAGCCCTAAGCCTCTAACTGGTTTATG

mRNA sequence

ATTCCGGATCCCGTTAACAAAACTCGCCTTAGAAGAGTGGGGTTAATTTAGTTACAGCATCAAAAAGAGGGGTGAAGACTGAAAAAAGGAGGAAGAAAGAAGCAAGCAAAAATGGCGTGGAGTGCGACAGCGATCGGATGTCTTCTCGGATTAGGCACCCAAATGTACTCAAACGCTCTTCGCAAACTCCCTTACATGCGTCATCCCTGGGAACATGTATTGGGAATGGGATTGGGAGCCGTATTTGTTAATCAGCTTGTCAAATGGGATGCCAAGCTTCAGGTAGACCTCGATAAGATGCTCGAGAAAGCCAAAGCCGCCAATGAGCGACGCTACGTTGATGAAGACGAGTAGCTGCTCTATGTGGATACAGACCATGTTGATTTGGTTGGACGCTCAAGTGGTCGCAAATGTGTCCTCTTTGAATCAGTCCACATTTTGGTTGTAATTCTGAGTTTGGTTAGAACTTCTCCTGTTTGAACCATATTATGTTGTTTGTATCTATTGGAAAATTTCCGATTGCACATGCTGTTTGGCTGTTGCGAATAGTCTGTAATAATGAAGGTACTTTCGCTTGTAGCTGCTGCCAATTTTGGAAACATATGAAATGCAACTCTTCTATAAAAAGAAAAAAAAAGTGCAAATATTGGCTAGTTTGGGTCAGATTTTATGTCCAGCCCTAAGCCTCTAACTGGTTTATG

Coding sequence (CDS)

ATGGCGTGGAGTGCGACAGCGATCGGATGTCTTCTCGGATTAGGCACCCAAATGTACTCAAACGCTCTTCGCAAACTCCCTTACATGCGTCATCCCTGGGAACATGTATTGGGAATGGGATTGGGAGCCGTATTTGTTAATCAGCTTGTCAAATGGGATGCCAAGCTTCAGGTAGACCTCGATAAGATGCTCGAGAAAGCCAAAGCCGCCAATGAGCGACGCTACGTTGATGAAGACGAGTAG

Protein sequence

MAWSATAIGCLLGLGTQMYSNALRKLPYMRHPWEHVLGMGLGAVFVNQLVKWDAKLQVDLDKMLEKAKAANERRYVDEDE

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo00900	Spo00900	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo00900.1	Spo00900.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00900.1.exon.1	Spo00900.1.exon.1	exon
Spo00900.1.exon.2	Spo00900.1.exon.2	exon
Spo00900.1.exon.3	Spo00900.1.exon.3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00900.1.utr5p.1	Spo00900.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00900.1.CDS.1	Spo00900.1.CDS.1	CDS
Spo00900.1.CDS.2	Spo00900.1.CDS.2	CDS
Spo00900.1.CDS.3	Spo00900.1.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo00900.1.utr3p.1	Spo00900.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo00900.1 vs. NCBI nr
Match: gi|902145844|gb|KNA05007.1| (hypothetical protein SOVF_194270 [Spinacia oleracea])

HSP 1 Score: 166.4 bits (420), Expect = 2.100e-38
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1

		  
Query: 1  MAWSATAIGCLLGLGTQMYSNALRKLPYMRHPWEHVLGMGLGAVFVNQLVKWDAKLQVDL 60
          MAWSATAIGCLLGLGTQMYSNALRKLPYMRHPWEHVLGMGLGAVFVNQLVKWDAKLQVDL
Sbjct: 1  MAWSATAIGCLLGLGTQMYSNALRKLPYMRHPWEHVLGMGLGAVFVNQLVKWDAKLQVDL 60

Query: 61 DKMLEKAKAANERRYVDEDE 81
          DKMLEKAKAANERRYVDEDE
Sbjct: 61 DKMLEKAKAANERRYVDEDE 80

[Close]

BLAST of Spo00900.1 vs. NCBI nr
Match: gi|731346143|ref|XP_010684300.1| (PREDICTED: uncharacterized protein LOC104898867 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 160.2 bits (404), Expect = 1.500e-36
Identity = 77/80 (96.25%), Postives = 78/80 (97.50%), Query Frame = 1

		  
Query: 1  MAWSATAIGCLLGLGTQMYSNALRKLPYMRHPWEHVLGMGLGAVFVNQLVKWDAKLQVDL 60
          MAWSATAIG LLGLGTQMYSNALRKLPYMRHPWEHVLGMGLG VFVNQLVKWDAKLQVDL
Sbjct: 1  MAWSATAIGALLGLGTQMYSNALRKLPYMRHPWEHVLGMGLGVVFVNQLVKWDAKLQVDL 60

Query: 61 DKMLEKAKAANERRYVDEDE 81
          DKMLEKAKAANERRY+DEDE
Sbjct: 61 DKMLEKAKAANERRYMDEDE 80

[Close]

BLAST of Spo00900.1 vs. NCBI nr
Match: gi|567912529|ref|XP_006448578.1| (hypothetical protein CICLE_v10017510mg [Citrus clementina])

HSP 1 Score: 152.9 bits (385), Expect = 2.300e-34
Identity = 73/80 (91.25%), Postives = 76/80 (95.00%), Query Frame = 1

		  
Query: 1  MAWSATAIGCLLGLGTQMYSNALRKLPYMRHPWEHVLGMGLGAVFVNQLVKWDAKLQVDL 60
          MAWSAT IG LLGLGTQMYSNALRKLPYMRHPWEH+LGMGLGAVFVNQLVKWDA+LQ DL
Sbjct: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLLGMGLGAVFVNQLVKWDAQLQQDL 60

Query: 61 DKMLEKAKAANERRYVDEDE 81
          DKMLEKAKAANERRY DED+
Sbjct: 61 DKMLEKAKAANERRYFDEDD 80

[Close]

BLAST of Spo00900.1 vs. NCBI nr
Match: gi|449433457|ref|XP_004134514.1| (PREDICTED: uncharacterized protein LOC101220487 [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 4.000e-34
Identity = 72/80 (90.00%), Postives = 76/80 (95.00%), Query Frame = 1

		  
Query: 1  MAWSATAIGCLLGLGTQMYSNALRKLPYMRHPWEHVLGMGLGAVFVNQLVKWDAKLQVDL 60
          MAWSAT IG LLGLGTQMYSNALRKLPYMRHPWEH++GMGLGAVFVNQLVKWDAKLQ DL
Sbjct: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60

Query: 61 DKMLEKAKAANERRYVDEDE 81
          DKML+KAKAANERRY DED+
Sbjct: 61 DKMLDKAKAANERRYFDEDD 80

[Close]

BLAST of Spo00900.1 vs. NCBI nr
Match: gi|659077851|ref|XP_008439421.1| (PREDICTED: uncharacterized protein LOC103484235 [Cucumis melo])

HSP 1 Score: 151.0 bits (380), Expect = 8.900e-34
Identity = 71/80 (88.75%), Postives = 76/80 (95.00%), Query Frame = 1

		  
Query: 1  MAWSATAIGCLLGLGTQMYSNALRKLPYMRHPWEHVLGMGLGAVFVNQLVKWDAKLQVDL 60
          MAWSAT IG LLGLGTQMYSNALRKLPYMRHPWEH++GMGLGAVFVNQLVKWDAKLQ DL
Sbjct: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60

Query: 61 DKMLEKAKAANERRYVDEDE 81
          DKML+KAKAANERRY D+D+
Sbjct: 61 DKMLDKAKAANERRYFDDDD 80

[Close]

BLAST of Spo00900.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QCK7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_194270 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.400e-38
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1

		  
Query: 1  MAWSATAIGCLLGLGTQMYSNALRKLPYMRHPWEHVLGMGLGAVFVNQLVKWDAKLQVDL 60
          MAWSATAIGCLLGLGTQMYSNALRKLPYMRHPWEHVLGMGLGAVFVNQLVKWDAKLQVDL
Sbjct: 1  MAWSATAIGCLLGLGTQMYSNALRKLPYMRHPWEHVLGMGLGAVFVNQLVKWDAKLQVDL 60

Query: 61 DKMLEKAKAANERRYVDEDE 81
          DKMLEKAKAANERRYVDEDE
Sbjct: 61 DKMLEKAKAANERRYVDEDE 80

[Close]

BLAST of Spo00900.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C1Z4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g163320 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.000e-36
Identity = 77/80 (96.25%), Postives = 78/80 (97.50%), Query Frame = 1

		  
Query: 1  MAWSATAIGCLLGLGTQMYSNALRKLPYMRHPWEHVLGMGLGAVFVNQLVKWDAKLQVDL 60
          MAWSATAIG LLGLGTQMYSNALRKLPYMRHPWEHVLGMGLG VFVNQLVKWDAKLQVDL
Sbjct: 1  MAWSATAIGALLGLGTQMYSNALRKLPYMRHPWEHVLGMGLGVVFVNQLVKWDAKLQVDL 60

Query: 61 DKMLEKAKAANERRYVDEDE 81
          DKMLEKAKAANERRY+DEDE
Sbjct: 61 DKMLEKAKAANERRYMDEDE 80

[Close]

BLAST of Spo00900.1 vs. UniProtKB/TrEMBL
Match: V4TMV6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017510mg PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.600e-34
Identity = 73/80 (91.25%), Postives = 76/80 (95.00%), Query Frame = 1

		  
Query: 1  MAWSATAIGCLLGLGTQMYSNALRKLPYMRHPWEHVLGMGLGAVFVNQLVKWDAKLQVDL 60
          MAWSAT IG LLGLGTQMYSNALRKLPYMRHPWEH+LGMGLGAVFVNQLVKWDA+LQ DL
Sbjct: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLLGMGLGAVFVNQLVKWDAQLQQDL 60

Query: 61 DKMLEKAKAANERRYVDEDE 81
          DKMLEKAKAANERRY DED+
Sbjct: 61 DKMLEKAKAANERRYFDEDD 80

[Close]

BLAST of Spo00900.1 vs. UniProtKB/TrEMBL
Match: A0A0A0KJ47_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G538720 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.800e-34
Identity = 72/80 (90.00%), Postives = 76/80 (95.00%), Query Frame = 1

		  
Query: 1  MAWSATAIGCLLGLGTQMYSNALRKLPYMRHPWEHVLGMGLGAVFVNQLVKWDAKLQVDL 60
          MAWSAT IG LLGLGTQMYSNALRKLPYMRHPWEH++GMGLGAVFVNQLVKWDAKLQ DL
Sbjct: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60

Query: 61 DKMLEKAKAANERRYVDEDE 81
          DKML+KAKAANERRY DED+
Sbjct: 61 DKMLDKAKAANERRYFDEDD 80

[Close]

BLAST of Spo00900.1 vs. UniProtKB/TrEMBL
Match: A0A059CCB8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E04324 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 4.000e-33
Identity = 69/80 (86.25%), Postives = 74/80 (92.50%), Query Frame = 1

		  
Query: 1  MAWSATAIGCLLGLGTQMYSNALRKLPYMRHPWEHVLGMGLGAVFVNQLVKWDAKLQVDL 60
          MAWSAT +G LLGLGTQMYSNALRKLPYMRHPWEH +GMGLG VFVNQLVKWDA+LQ DL
Sbjct: 1  MAWSATMVGALLGLGTQMYSNALRKLPYMRHPWEHAVGMGLGVVFVNQLVKWDAQLQEDL 60

Query: 61 DKMLEKAKAANERRYVDEDE 81
          DKMLEKAKAANERRY D+D+
Sbjct: 61 DKMLEKAKAANERRYFDQDD 80

[Close]

BLAST of Spo00900.1 vs. TAIR (Arabidopsis)
Match: AT4G20150.1 (unknown protein)

HSP 1 Score: 135.6 bits (340), Expect = 1.400e-32
Identity = 65/79 (82.28%), Postives = 69/79 (87.34%), Query Frame = 1

		  
Query: 1  MAWSATAIGCLLGLGTQMYSNALRKLPYMRHPWEHVLGMGLGAVFVNQLVKWDAKLQVDL 60
          M  SAT +G LLGLGTQMYSNALRKLPYMRHPWEHV+GMGLGAVF NQLVKWD KL+ DL
Sbjct: 1  MPISATMVGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFANQLVKWDVKLKEDL 60

Query: 61 DKMLEKAKAANERRYVDED 80
          D ML KA+AANERRY DED
Sbjct: 61 DVMLAKARAANERRYFDED 79

The following BLAST results are available for this feature:

BLAST of Spo00900.1 vs. NCBI nr
BLAST of Spo00900.1 vs. UniProtKB/TrEMBL
BLAST of Spo00900.1 vs. ExPASy Swiss-Prot
BLAST of Spo00900.1 vs. TAIR (Arabidopsis)

BLAST of Spo00900.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902145844\|gb\|KNA05007.1\|	2.1e-38	100.	hypothetical protein SOVF_1942...	[more]
gi\|731346143\|ref\|XP_010684300.1\|	1.5e-36	96.2	PREDICTED: uncharacterized pro...	[more]
gi\|567912529\|ref\|XP_006448578.1\|	2.3e-34	91.2	hypothetical protein CICLE_v10...	[more]
gi\|449433457\|ref\|XP_004134514.1\|	4.0e-34	90.0	PREDICTED: uncharacterized pro...	[more]
gi\|659077851\|ref\|XP_008439421.1\|	8.9e-34	88.7	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo00900.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9QCK7_SPIOL	1.4e-38	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8C1Z4_BETVU	1.0e-36	96.2	Uncharacterized protein OS=Bet...	[more]
V4TMV6_9ROSI	1.6e-34	91.2	Uncharacterized protein OS=Cit...	[more]
A0A0A0KJ47_CUCSA	2.8e-34	90.0	Uncharacterized protein OS=Cuc...	[more]
A0A059CCB8_EUCGR	4.0e-33	86.2	Uncharacterized protein OS=Euc...	[more]

BLAST of Spo00900.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo00900.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT4G20150.1	1.4e-32	82.2	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36052	FAMILY NOT NAMED	coord: 2..80 score: 2.8

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009060	aerobic respiration
biological_process	GO:0006096	glycolytic process
biological_process	GO:0009853	photorespiration
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0005774	vacuolar membrane