Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTGAACCTCAAAATGTATGTTTTTCTTATCAAAACTCAATCCATTCTTAATTTTGGTGCCTCATTTCTATCTATCATCTCATCTCTCAATACTATCTCTCCTTTGACTAGCTAGTCCAAGTCAAACATATATATTCGCTTAAGCCCATAATGGGGATCAAGATTCATGGAAGCCCTTTCTCCGGCGCCACCCTCCGTGTCGTGGCCGCTGCTACTGAAAAGGAACTTGACTTTGAATTCGTCCACGTTGACATGAGTGTTGGTGCTCACAAACAACCACCTTTTGTCTCTCTTAACGTAAGTTATTCACTTTATCATATATGGATTCATTTCTTATTCTAAACTAAATAAATTATAGTTTTGGCACACTTCTATTTGAGTAGATCATATGAAACTCTGTTTTGATAATGTTCGTACCAAAATTACCTTTCTTATGGATAATCTAATGTTAGACGACACACTTATTTTTTGCTTTATATATGAGGAAAATTATTGGGGAAAGGTTTTTCAATAGCTACAATAAAATTGTAGCCATGATAAGTCTTTTAATCTCAACCGTCAAAATCCAATAAGCAATCTCAACCGCTATTAGAATTTACTATTTTACTACTGAAAATTAAAAATTAAAAATTAAACTTATTAACCTCACCTCGTCAAATGTAAATCTGATATCCAATTTCTGATCATCCTACAAATTAATTGTGGATGTCAAGATAATTTATGTCAACATTAATTTGTAAATGATGCCAATAATAGCTTAAGTTTCATTCGAATTCGGTTATTGTTGTTGAAGACAGGGATTCTACTACATGTACACCTAGTATACAAAGCATCTTGTACACCATGTTTCTCTATTGGTTGAAATGGCATATTTATTGTCTTTCATTCTCATTTTTTAGTGGGTTTGATGATGTGTCAACAAATTAATGAAGGTGTACAAGAGAATATTATACACTAGGTGTACTTGTAGCCTTTTCCTAAAGACAGACAATAATGCAATTGCTGAAAAGTTGCAGTTAATGAAGACAACAATGGCGTGAGCCATGAAGTCATTAACGTTTTCAGTTATTCAACCTATCTGCCGTTGTTCGATCGTTGGAAGTCCGAAATGTTTAGTGTATTATATTTTTAAAGAAAAACCATCCTAGATTTCAATTGATTGTTGGTCAACTCTATGAATGGTTAAAATTAAATATATTAAAATGAACGGTTTAGATTGGAGATGGTTACCATGTCTACAGTTTTAATATAGCTATTGTAAAATTAACCAATTGTTGGAACAAATTAAAAAGTTACATTTGTTCAAAGATAATGATGTAAAATTTTAATTTTCAGCCATTCGGTCAAGTTCCAGCTTTTGAAGATGGAGATCTCCAAATTTTTGGTAAGTGAAAAAACTTGTCTATTATTTATATATATTATTGTCACGTTATTTTGATTGACCATTTGAATAAATTATCACGTACACGGTACACTTATTGTGCATCTTTATTTATGGGTCACGATCAACTATATTAGTGTATATATAATACATTCGATCTTGATTATTAATTATTAAGTAGAAATTGAACCCTTGTAAATTCTAATAAGACTATTCGATGTCGACCTTGTTAATAAAACAGAATCAAGAGCAATTACATCGTACATAGCATACGCCTACAAAAGTAATGGAAGCGCATTGGTACGTGAAGACATTAAAGAAAAGGCAATCCAAGCCGTATGGATGGAGGTTGAGGCTCACCAATTCGACCCACCCGCTATCAAACTCATGTGGGAGCTTGTGTTCAAAGGCATGTTTGGCATGGAAACAGACACGGCTATAGTCGAAGAGAACAAGGCTAAGTTGGCTAAAGTCCTTGACATTTACGAGGCTCGTTTAAGTGAATCTAACTACTTTGGTGGTGAAACATTCACTTTAGCTGATCTTCATCATTTACCTCAATTGCATATACTAATGGACACCGATGTCAAGACTATTTTCAATGAACGCCCTAATGTTAGTGCTTGGTGCACTGATATCTTGGCTAGGCCTGCTTCCATTAAGGCCATAGCCTTGCTTAAGGAGTTTATGTAATCGATCAACATTTCCGTTCTACTTTCTTTCTCATTTGCCTATGTACGTCATGTTTTGTTTGTCACCGTTTTTTTTTATGTTTTCTTTTGCTTTTGCTTTTCATATTTACATATTGTTAATTTTATTGTTTTTAATAATAATTCCACTACTTTACAAATAACTAATTCAGTGT ATTGAACCTCAAAATGTATGTTTTTCTTATCAAAACTCAATCCATTCTTAATTTTGGTGCCTCATTTCTATCTATCATCTCATCTCTCAATACTATCTCTCCTTTGACTAGCTAGTCCAAGTCAAACATATATATTCGCTTAAGCCCATAATGGGGATCAAGATTCATGGAAGCCCTTTCTCCGGCGCCACCCTCCGTGTCGTGGCCGCTGCTACTGAAAAGGAACTTGACTTTGAATTCGTCCACGTTGACATGAGTGTTGGTGCTCACAAACAACCACCTTTTGTCTCTCTTAACCCATTCGGTCAAGTTCCAGCTTTTGAAGATGGAGATCTCCAAATTTTTGAATCAAGAGCAATTACATCGTACATAGCATACGCCTACAAAAGTAATGGAAGCGCATTGGTACGTGAAGACATTAAAGAAAAGGCAATCCAAGCCGTATGGATGGAGGTTGAGGCTCACCAATTCGACCCACCCGCTATCAAACTCATGTGGGAGCTTGTGTTCAAAGGCATGTTTGGCATGGAAACAGACACGGCTATAGTCGAAGAGAACAAGGCTAAGTTGGCTAAAGTCCTTGACATTTACGAGGCTCGTTTAAGTGAATCTAACTACTTTGGTGGTGAAACATTCACTTTAGCTGATCTTCATCATTTACCTCAATTGCATATACTAATGGACACCGATGTCAAGACTATTTTCAATGAACGCCCTAATGTTAGTGCTTGGTGCACTGATATCTTGGCTAGGCCTGCTTCCATTAAGGCCATAGCCTTGCTTAAGGAGTTTATGTAATCGATCAACATTTCCGTTCTACTTTCTTTCTCATTTGCCTATGTACGTCATGTTTTGTTTGTCACCGTTTTTTTTTATGTTTTCTTTTGCTTTTGCTTTTCATATTTACATATTGTTAATTTTATTGTTTTTAATAATAATTCCACTACTTTACAAATAACTAATTCAGTGT ATGGGGATCAAGATTCATGGAAGCCCTTTCTCCGGCGCCACCCTCCGTGTCGTGGCCGCTGCTACTGAAAAGGAACTTGACTTTGAATTCGTCCACGTTGACATGAGTGTTGGTGCTCACAAACAACCACCTTTTGTCTCTCTTAACCCATTCGGTCAAGTTCCAGCTTTTGAAGATGGAGATCTCCAAATTTTTGAATCAAGAGCAATTACATCGTACATAGCATACGCCTACAAAAGTAATGGAAGCGCATTGGTACGTGAAGACATTAAAGAAAAGGCAATCCAAGCCGTATGGATGGAGGTTGAGGCTCACCAATTCGACCCACCCGCTATCAAACTCATGTGGGAGCTTGTGTTCAAAGGCATGTTTGGCATGGAAACAGACACGGCTATAGTCGAAGAGAACAAGGCTAAGTTGGCTAAAGTCCTTGACATTTACGAGGCTCGTTTAAGTGAATCTAACTACTTTGGTGGTGAAACATTCACTTTAGCTGATCTTCATCATTTACCTCAATTGCATATACTAATGGACACCGATGTCAAGACTATTTTCAATGAACGCCCTAATGTTAGTGCTTGGTGCACTGATATCTTGGCTAGGCCTGCTTCCATTAAGGCCATAGCCTTGCTTAAGGAGTTTATGTAA MGIKIHGSPFSGATLRVVAAATEKELDFEFVHVDMSVGAHKQPPFVSLNPFGQVPAFEDGDLQIFESRAITSYIAYAYKSNGSALVREDIKEKAIQAVWMEVEAHQFDPPAIKLMWELVFKGMFGMETDTAIVEENKAKLAKVLDIYEARLSESNYFGGETFTLADLHHLPQLHILMDTDVKTIFNERPNVSAWCTDILARPASIKAIALLKEFM Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo00989.1 vs. NCBI nr
Match: gi|902164841|gb|KNA07011.1| (hypothetical protein SOVF_175750 [Spinacia oleracea]) HSP 1 Score: 434.1 bits (1115), Expect = 1.400e-118 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 1
BLAST of Spo00989.1 vs. NCBI nr
Match: gi|731374738|ref|XP_010667052.1| (PREDICTED: glutathione S-transferase-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 323.2 bits (827), Expect = 3.500e-85 Identity = 156/213 (73.24%), Postives = 178/213 (83.57%), Query Frame = 1
BLAST of Spo00989.1 vs. NCBI nr
Match: gi|902190159|gb|KNA11546.1| (hypothetical protein SOVF_134140 [Spinacia oleracea]) HSP 1 Score: 308.9 bits (790), Expect = 6.900e-81 Identity = 148/213 (69.48%), Postives = 175/213 (82.16%), Query Frame = 1
BLAST of Spo00989.1 vs. NCBI nr
Match: gi|731375679|ref|XP_010667331.1| (PREDICTED: glutathione S-transferase-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 308.5 bits (789), Expect = 9.000e-81 Identity = 149/213 (69.95%), Postives = 172/213 (80.75%), Query Frame = 1
BLAST of Spo00989.1 vs. NCBI nr
Match: gi|731345745|ref|XP_010684078.1| (PREDICTED: glutathione S-transferase-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 308.1 bits (788), Expect = 1.200e-80 Identity = 147/213 (69.01%), Postives = 176/213 (82.63%), Query Frame = 1
BLAST of Spo00989.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QK86_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_175750 PE=3 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 9.900e-119 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 1
BLAST of Spo00989.1 vs. UniProtKB/TrEMBL
Match: A0A0J8DXP0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_006410 PE=3 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 2.500e-85 Identity = 156/213 (73.24%), Postives = 178/213 (83.57%), Query Frame = 1
BLAST of Spo00989.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QYD9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_134140 PE=3 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 4.800e-81 Identity = 148/213 (69.48%), Postives = 175/213 (82.16%), Query Frame = 1
BLAST of Spo00989.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B382_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_008080 PE=3 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 6.300e-81 Identity = 149/213 (69.95%), Postives = 172/213 (80.75%), Query Frame = 1
BLAST of Spo00989.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ESU8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g161860 PE=3 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 8.200e-81 Identity = 147/213 (69.01%), Postives = 176/213 (82.63%), Query Frame = 1
BLAST of Spo00989.1 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 6.900e-73 Identity = 128/213 (60.09%), Postives = 163/213 (76.53%), Query Frame = 1
BLAST of Spo00989.1 vs. ExPASy Swiss-Prot
Match: GSTF_SILVU (Glutathione S-transferase OS=Silene vulgaris GN=GST PE=1 SV=3) HSP 1 Score: 273.5 bits (698), Expect = 2.000e-72 Identity = 133/216 (61.57%), Postives = 167/216 (77.31%), Query Frame = 1
BLAST of Spo00989.1 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 8.400e-71 Identity = 126/213 (59.15%), Postives = 159/213 (74.65%), Query Frame = 1
BLAST of Spo00989.1 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 3.200e-70 Identity = 126/208 (60.58%), Postives = 158/208 (75.96%), Query Frame = 1
BLAST of Spo00989.1 vs. ExPASy Swiss-Prot
Match: GSTF8_ARATH (Glutathione S-transferase F8, chloroplastic OS=Arabidopsis thaliana GN=GSTF8 PE=1 SV=3) HSP 1 Score: 247.3 bits (630), Expect = 1.500e-64 Identity = 121/212 (57.08%), Postives = 150/212 (70.75%), Query Frame = 1
BLAST of Spo00989.1 vs. TAIR (Arabidopsis)
Match: AT2G47730.1 (glutathione S-transferase phi 8) HSP 1 Score: 247.3 bits (630), Expect = 8.700e-66 Identity = 121/212 (57.08%), Postives = 150/212 (70.75%), Query Frame = 1
BLAST of Spo00989.1 vs. TAIR (Arabidopsis)
Match: AT2G02930.1 (glutathione S-transferase F3) HSP 1 Score: 243.8 bits (621), Expect = 9.600e-65 Identity = 119/210 (56.67%), Postives = 150/210 (71.43%), Query Frame = 1
BLAST of Spo00989.1 vs. TAIR (Arabidopsis)
Match: AT4G02520.1 (glutathione S-transferase PHI 2) HSP 1 Score: 243.4 bits (620), Expect = 1.300e-64 Identity = 119/208 (57.21%), Postives = 150/208 (72.12%), Query Frame = 1
BLAST of Spo00989.1 vs. TAIR (Arabidopsis)
Match: AT1G02920.1 (glutathione S-transferase 7) HSP 1 Score: 233.8 bits (595), Expect = 9.900e-62 Identity = 111/207 (53.62%), Postives = 146/207 (70.53%), Query Frame = 1
BLAST of Spo00989.1 vs. TAIR (Arabidopsis)
Match: AT1G02930.1 (glutathione S-transferase 6) HSP 1 Score: 231.5 bits (589), Expect = 4.900e-61 Identity = 111/207 (53.62%), Postives = 147/207 (71.01%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo00989.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo00989.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo00989.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo00989.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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