Spo01129.1 (mRNA) | SpinachBase

Overview


Name	Spo01129.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Photosystem II stability/assembly factor HCF136
Location	chr2 : 58686154 .. 58695128 (-)
Sequence length	2489

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATTACGTGGTGAAAACAAAAAGAAGATTATTGGAGATGCGGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCAATTGGTTTACAGTCTTTATTAAAAGTTATTTAGCTTTTATAATAATGTTTTGAAAGAACGTTATCCAGACAAATCCTGAAATCCATAACCCCGCGAAACCGTTGATATGGAACAAGATAAGAGAGATAGATAGAGAACAACACAAACAAGCACTGACAACAATTCTAGCAATGGCGTCTTCAGCACCATTGCAATTTATCGAATGCTGCGCCAATTCCACCACCGTTACCACCAATAAAACCACCGTACTCTACCACTCTATCTCCTCTTCTTCCTCTAACCGCTGCCGTGTCACTCTCTCCCCTCTTACTCATAGACGCCGCTATTCTCCTCCCAGAGCTTGCTCTTCGCCGCAACCGCAACCACAACCGCGAAGGCAGTTCTTAGCTCAATCGGCTGCCGCTGCTGCGGCGGCGTTGTCTCTTTCGCCTTTTCTCTTTCCTCTTCCGGCAAAATCGGAGGACTCGCTTTCTGACTGGGAGAGAGTTTACCTTCCGATTGACCCCGGCGTGGTTCTACTAGATATTGGTTTTGTTCCTGAAGATCCTAATCATGGTACTCTCTTTGTCTTTTACAATTAGTTTTTTTTGTTTTCATTTGAATTACTATATACTTTTTGTTTTGCTCGAATTTTCATTTTATCGAATTTTCGTATAATAATATTAATATTGATAAGTAGTTATGTGTTTTATGGCTTGTCTCATTTTGATGAGTTTTATATTTATTTCTATTGTGATGTGATTTTTATAAATTGATAAAATTTGGACACCTTCAATAAAGACTGTTATTGTGAAAACTCAATAATTGGAAGTCTGAGATAAGAATTGTTTCAAGAATCGGTGATTCAAGGTATTGACCGGTTCGCTGATGTTTTTGAGCTCGGATGTACCTACGCACGAGTGAGTTAACTGGCCTCGAGGGTTTCGAGGAAACCCCCTCCGATGGCTAAGTCAGGCGATGAATTACTAGGTTTGAAGTGGCATATCAATGTGTATTCTCGAAGTATGTATTATATACAGTAATTTAATGGTCAAAGCCTAAAAGTAGTGCGTTAGAGACCGTGGAACCCCCCGATATGTATAAATATTTTGGAACAAAGGAAGTAAAGGTGCGTTCTATACTTCTATTCACCTGATTTTCACTCATCTAAACTTAATCGAACTGATGTGAACTTATAGAACTTACCAAATTTTATTTTAGTTGTAATTTGAACCTTAGAGGCCTTAATTTTTCTTAACTTGTCTTGTCTGTACTTATTTTTCCTTAAATGAGTGAAAATAAGGTGAACAAAACATGTCTCCAGTCCTACGTTGTATCATTTTCCCTTTACGCAGTTGAAATTGAAACTCTATATGAGAAATACAACTGATATTCTGAAATATGAAGAATGTTTGGTGCTTTCCAAGATCAAGTCTTTTACCAATAAAAAGAGTCTGTTGGAAATGCTGAAGAAATGTCTGGCTTGCAGGATTTCTGTTAGGGACAAGGCAAACTATTTTAGAGACAAAGGATGCGGGACAGACTTGGGTCCCGCGTTCTATACCATCAGCTGAAGAAGAGGATTTTAATTACAGATTCAACTCCATAAGCTTCAGAGGGAAGGAAGGTTGGATTGTTGGTAAGCCTGCAATTCTGTTGTACACTAATGATGCTGGGGAAAACTGGAAAAGGGTACCGCTGAGTTCTCAGCTTCCGGGTGATATGGTAAGTTTTTGTTGGTCAAAAGTCTGTGTGTGTTGCTAGTAGAAGATAAGAGTTAATAACTCATGACTGTCTCGCAAAATTTTTCATTTGCTTCTGGAGTTATTGATGATCTTGGAACTTTCAGCTGTATATGTTTTTCCAACTACGGAGTTAAGCATCATCTGTGAAACTAAACCTGTTCTTGAATATAAATTTTATTGAAGGTTCTTGGCCATCTAATGTTAGTATTTTTCAGTCAATGCTAGACCTTATCTTCCTGCTTCAAGTTTTCCATTCTCAATTCTCAGCATCGCTGTTTGCCTGGAAGTAATTTATTGACCATCACTTTGAAGAGCAGTTTTCTGAGGAATACTTAATATTTATGTTTCATTAGGTTTATCAATTTGAGTCAGCGATTCTGTTTTGTTTTGTAATTATGCTCAGATGATTTTTTTCCTTCTATTTTGTTTTGCCTATTGCTTTAAAGTTGTGTATCTTCTAATTTGCAATTGTAGGCTTCTTTTACCTTTTTAGTTCCTAAAGGGTAGTTTGTCTCTTTAGGTTTATATAAAGGCAACAGGAGAAAACAGTGCAGAGTTGGTGACTGACGAGGGAGCAATATACAATACTTCAAATGGTGGTTACAACTGGAAGGCTGCTGTACAGGAGAGTGTTTCGGCTACCCTTAACAGGTGACTTATTCTGAAAACATGTTTGTCTCGTATATATTATGTATATTGAAGTCTTTGACAGGATATATGTAAACTGTAAAGTAAGAAGAAATTTAAAGATAAGAGTTAGGATGTTATCCAGTTTGTTATGTCACTGTTTGCTGGCAGCTTAACTTTCAATGGTTTCTCGTATCATACTTGTTTCCAGCTGTTATACTCTCATTCTTGTGATGTCTCTTATATGAACTTCTTCCTTCTTTATCAATCCACTGTCTCCCTCAGATTACTTACCTGAATCAGAGAACCATGTTACAATAAAGTAGGAAACACTAGTAAGAGAACAAACGGGTAATATACGTCTGAAAAATGTAGAAACAATTTCGGCATTATGTCTTACAAATGATTTTTCTTGAGATGCCTCTTGCATGTACAAAAATGCAATGTTCATCCACTTACAGAGCTTCGTTGCTTTTGCAGAACAGTCTCAAGCGGTATTAGTGGTGCAAGTTACTACACTGGTACCTTTAATACTGTCAATCGTTCCCCAGATGGTAGATATGTTGCTGTTTCAAGCCGTGGAAACTTTTATCTGACTTGGGAACCTGGCCAGGTGTCATTCTTTTGCCTTCTTGCATCAATGTTTTTCAATAACTGAATACTTTAGTGAATGCATGTTCAAGTTAATGTTGCCTCTTTGTTCACAAATAGCTTAACGAAGCAAGCATAGGATCATGTTCACTGGGTACATTTACAAGAAACATCAGAGGTTTCTCGTGATTCATAGTTTAAACATTGTGTGAAGTTTTCAAATAAAACTGAATACCAAATAAGCAAGAAAAGAAGATAGGCGTATGTGTGTGTGTGTGTGTGTGAGGGGGGGGGGGGGGGGNGTTGATGGAGGGTTGAGAAGATTACGTTTAATGAAAGCAAGAAAAATGGATACAGGCTGATGTTCTTTAGGCAAATATTATTATGTAACAATCTTATTTTATCATTCTTTTAACAAAATTTCCTATATAATCGCCTTATCGGGTCACGAAGTGTGGTGAACTCTATTGATCTATGTATATGTCATGTTCAGGCTTACTGGCAGCCACATAACCGAACAATTGCAAGAAGAATTCAGAACATGGGTTGGAGAGCTGATGGTGGTCTTTGGCTGCTTGTACGTGGTGGTGGAATGTATTTAAGCAAAGGCTCTGGGGTCTGTGCTAATACCCTTTTATTTGCATGCAACTCCATTAATTTCTCTTATCGTGCAATCATCATACATTGTTTTCAAACCCTTTTCTTGGACCTTTAGAAAAGTGTTCACATCATTTAAGAAAATCATTGGAAATACCATTTCTCCGTTTCTCTTACTGTGTCACCGAATACTCACATTAGACTATTTTTGAATCTGAATTTTATTTCAAGTTCTCAGGTCTTACGTCAGTGTCTGTGTAAAGAATAATAAAATATAAAATTAGATAGTGCAGAGACAGAAGAGGGTGACTACACTTATCTTTTCATAAGCAAAAATTTTAGGGTAGTGAGCATGTTAACAGTTGACCTGCTGTTTAGTTGCCTGAAGTGTTACATCATACACTAGTTACTTATCTGATTTGATTTTAGCTTTAGTCTGCTTATGTTTTGCTGCTGCCTTCAATCCAATTTAATGCTAGTGTCATTCTGTAACACAGATGTCGGAGGACTTTGAGGAAGTGTCCGTACAAAGTCGTGGTTTTGGGATTCTTGACATTGGATATCGCTCACAGGTATTCTTTGATGAATTTCATGTGTTTTATGATTTGCAAAGGATAATGGGTAAATAAACCATCAAGTATTTTCTTTTGCTTTCTCCTTTATGGGTTAGCAACATTGGATTTGTGACCTCAGTGGAGGCGTGTAGTTGAGGCTGCAAGCACATGTTCTTATTCTACTGTGAAACTGGTGTTAATTTAGAAGACAATTGAACTGCTAATATCAAATTTCTGCTTCATCAAAGATTCTTGTTTAGAGATATGCATATTCCCTCTGTATAAGCACAACCAAGGTAGGAACTGAATAATCAAGCAGCATGCTCTTAGTTCTATCCTTCAAGACTCTATGTGCTCAACCCGAGAGGGACCTCTTATACACAGACGTCTCTAAGTCCGACCGTCATTGTTTTTGCTAGTATTTATTAATGAGTTAAGAGGTTCCAGTTAATGGCCCACTAATCTTGGCCAGTTTTTCTTCTTCATGACCGGAACTAAACTGATGTCCTAACTCCTACGGACCCTATTAATAAATATTAGATGAAAGTCCTTACTTAAATCATCTTAGATAATGGGAGATTTATGCTGGTAGGCACAATACCTTATGAGAATTTGATAAAGCTAGGACCACTTGGAGTCAGTGGAGATCTGGACACTGATTAATCCTTTGTAATTAGTTTCCGTTAACAGGAGTATGTCTTTGGCTTCAATCCGAGTCTATGCTGGGGAGTACTCATAATTGGCAGGCTTTCTTTTAAGACAATTTGATCCCAGATTATATCTTTAACTATCCATCCAACTCGGAATTCAATGAAACTATGTCCTTTTCGGAATGGTTTCTGTTTTATATCCGGCAATTTCAACGCCAGGATGGGAACCGCAGCCTGAGAATAGTGTACTTTATTAGTACACTTTGGGGCCTGTGGTTGACTAGGAATAACAGGGTATTTAGGGGAGAGATTTCGACAATTGCAATTGCTCAAGCGCTTATCAATAAGGGGATGAGTGAACATGGTTTTCTTCGGAATCAAAAACATCCATATTTAGGGTTTCTACATCCTCCTGAGGATTCTTTAGGTTTTCCACCAGGTTTTTTCAGGGCTATCATCTCGGGTACGGAAGACCAGGGTGCTCCAGCTATAATCTTGGTGGATGGTTCGTGGCATAAGATTACTGGGAATGCTGGAATGGGTTGGGTTCTAGATGGTCAGTATCTGCAGGAGGGGAGAATTCTGGGAGGAGCTCAGCCAGGCACTTCTCATTCGGCTTTGAAATCAGAGGCTAAAGCTTGTCTTCTAGGTTTACGGTGGGCGTCTCAGTCTTTGATAACAAGAGTTACAATTTTAACTGATTCACATCGGTTAGTTGAACTGTTGCGAGGGGATGCGATGTTAGATGTGCAAATCATGTGGACAGTTGCGGAAATCAAGAAAGTGGGGAAAACCTTTTCTTGGTGTTGTGTCAACAAGGTTGATCGTCAACAAGTGCAGCAGGCTCATGAGCTAGCAACTGCAGCGTCTACTTCTCTTTTGTGGTTTAATACTTTTGCGTAGTTTGTTTAGTTTGTTCTTTGAGCATATGTCAAAAAAAAAAAAAAAAAACTATCCATCCAACAGAAACTTTTCCCCAAACTCCTCTCTAGTTTGTTTCTTCCAAAAGTCTTCATCTTCAACAACAAAACAAATATGTAAATTTTCTCTACACAAGAATCACCTACAGGTCCTGGTTCGGTTTCATCTTTTCCTGGGGGATTAGATTGTCCGTGTGTTGGAGAGTGTACTTTGGGCTTGACTATTCCTCTAACACTTAAGACTGGGTTTCCTCTACTAATTAACATTTCCGATGGGATGAGAGATATATTTAAATTTAAGATGGTTCCTATAGAGAAATAAGCTTCACAGGTCCACTACGAAGGATTCAGTTCTTTTCCAGTCATCCTTGTCCAATTTTTGATAAGAAGATTTTCTTAAGCTGTCCTTGATTTCAATGTCTTGACCTATACCAGTGTTGAGGCCTAGTTTTCTTGCTCATGAGACCTTTGATGCAGTGAAGCAATCTCTAAGGAGGTGTTTTGGAATTTCATTTTCTTTCCCACATACTTCCCATAAGGGACCAATTTGCACCACTAACCTATAAAACTTACCCGTTTGTAAGAAGGTAATTCATTACGAATTCTCAAGGAGCTTCTGTTTTTACATGTCACTGGGCAATATTGTCTTCTAAATCGTGTCTCTGCTCCAGGGACAACCCATGGGCTATTATTTTGGATCATAAAGGTGTACCTAGATTTAACAGAGTAAATCCCCGTGGGAGACATCATCTATTTCCTTTGTTACTGTTAGGCTGTTCGTAAAGGTTGTGCATTAGAAGAGGAGGATTTGATACTCTTGCTCTCTTCGGTTTAAATTGACATGTTTATAAATAATTGGGTGGTCGACTTCGAGGCTGAAAGCCCTAATTGTATTTTCTGTTATCCTCCGAGTAGAGATGCTTTTTCTTCAAGGAAAAGGATCGGCTATCTTCCTACTTCACAAGAACAGAACCAACAGACATTTGAGGATTGAGGAGTCAGGTGGTAAGGTGGTCTAGTTTGTTTTTTTACAACATTAACCCAATGCCGAACACTGGGGGGGGGGGTTGGATGTATGTAGTCTGACTTTCCGGATAACTAAGAGTCTAAGAGGGTATTAGTCCGATAACTTGATGAGCAATGACTGCTAGCTATTTTCAATTAAGAAATTATGAAATGCGTTGACAGTTCAGTCATTCATTATCATTACCCCATTGCCTCAAAGAGGCTCCCGCAAGAAGCGGGGTAAGGGGGTGTCGGGTGTACGCAACCTTACCCCTGCAATTGCAGAGAGGTTGTTTCCAATTGACCCAAAAGCGATAACGGGACGACTACGAGACGACCATCTCCTACTTCATGGAAAGGAAGCGAAGAGGTTTTAAGAGCCATTTTGATTTAGTCCATTACATTCCACAACCAAAAGAACAAATGAATCTTTGGCTCCATCTGAAATTGACAGTTCAGTGAGCCATTTAATTTTCCATCATGATCAAAAGTTGTGATTACTTAGTGTTGTTAAAAATGTAGATTCCAGCTAACTTTGCAAAATCTTTCATCGCGATGATATTATAATGTTGTTCTATGATATCTTTACCAACAGTTACCTTGGAATTACTCTTTATTTTTGCAATTGAAAGGGTAGTATTCATTTATTTGCAAAGATAGCATGTACTTTGTGGTATGGTATTATCTCATTTCTCTATTGACATCTGGAACTCTTTTTCCAAAAGATCCTGTCTACTTGCTAGAGGGTAGTCTCTAATGTTTCAATGTTTCATGCTCTGCACACCTGTTTTAGTTGTTGCTTACTGTTGATGGTCTGAGTTTATCTGAAATGCAGGATGAAGCTTGGGCAGCTGGAGGAAGCGGGGTTCTATTGAGATCCAGCAATGGTGGTAAGAGCTGGGCTCGTGACAAAGCAGCTGACAATATAGCCGCAAATCTTTATTCTGTGAAGTAAGCTTACATTTCAATGATTGCTGTGGTTATTCATGAACTTATTTCTGTCTCCTCATATGCCACTTAAAGTCACATTGTACTTATCCCTTTCGTCCCTTCACACAGTTAACTTGTGTTTGTTTTGACTGTAATTTCCTAAATATCTAGTTGCTTCATGCATTATTTTGACTTTAATTTCCTAAATATCTTGTTGCTTCATGCATTTGAGAAGTAACCTTGTGGTTAATTTGCAGGTTTATTGATGACAAAACGGGGTTTGTGCTTGGAAACGATGGAGTTTTGCTTAGATACCTGGGATAGAGATGGTGTATACTCATGGTAAGCTAGTTACTCTTCATTTTGTTAATGTGAATCTTGCGTAGAGATATATTCTACTTTGCTAGTTAACTGGATGCTGTTATTTTGACAAAACCAAATGTAACATTTTTAGTGTTACGGGGCGACCTTGGAAGAAATGAAGTTTTACTAAAAAAAAAAATCCAAGCTAAATTACGAGCTGCATTCCTAAACCTCTTTGCCCTAGTTTACTAAGAATACAAAGATGATTATCAGTCTGCTATATATTAAATGTTTTGTGCAGCTTGCTGAGTTGCTGTAATGGAGCTTCTTCTAACTATAATGGTCATTTTTAACCGTATGCAGGTTCCTCAGTAATTCTGGTCGAGTTTTGTATCTGTTGTATGAGTATTCTTACAATTTTCCTTGTATCCAAGGAAAAACTGAGATGATTCTTTGATTGTCGATATATGATACTGTAATTAAAACAGGACATTTGATTTTGTACCAAGCTACTGTATACCAATCTTGTTGAAAAGCCACAATCTCCTTTTTTGCAAGGTATACCATCATTATTCAGGTTGATTAGCATGAACTGGTTTTGTAAATTCTCAAGAAATCTTCAAGGATCTTTATCTTGAGCCTAGGTTGGCAGATTGTTTTCCATTTTTCTGGCAATTTGTGACTTTTCAGTCTTTTCTTACAGTAAAGTGACACTATTTGGTGATTTAACGAGGAAAAAATAGGTGTTAGCAAGCTTTGATGTAACGGTGTCACAACTTGAGCAGAGGGCGGAGAGGCCCATATCTGAGATGTACGGATAAGACAAGCATTAAAACAAGTGCCATTTTTCAAAGAACAGATGCCATTTTGGAAAAATGAATGTCATTTTTCAAAAACAGATGCCATTTTACAAAAACGGATGTCATTTTTCAAAAAATTTGATTTTGTCATTTAGTGTTTGTCTTTAG

mRNA sequence

ATATTACGTGGTGAAAACAAAAAGAAGATTATTGGAGATGCGGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCAATTGGTTTACAGTCTTTATTAAAAGTTATTTAGCTTTTATAATAATGTTTTGAAAGAACGTTATCCAGACAAATCCTGAAATCCATAACCCCGCGAAACCGTTGATATGGAACAAGATAAGAGAGATAGATAGAGAACAACACAAACAAGCACTGACAACAATTCTAGCAATGGCGTCTTCAGCACCATTGCAATTTATCGAATGCTGCGCCAATTCCACCACCGTTACCACCAATAAAACCACCGTACTCTACCACTCTATCTCCTCTTCTTCCTCTAACCGCTGCCGTGTCACTCTCTCCCCTCTTACTCATAGACGCCGCTATTCTCCTCCCAGAGCTTGCTCTTCGCCGCAACCGCAACCACAACCGCGAAGGCAGTTCTTAGCTCAATCGGCTGCCGCTGCTGCGGCGGCGTTGTCTCTTTCGCCTTTTCTCTTTCCTCTTCCGGCAAAATCGGAGGACTCGCTTTCTGACTGGGAGAGAGTTTACCTTCCGATTGACCCCGGCGTGGTTCTACTAGATATTGGTTTTGTTCCTGAAGATCCTAATCATGGATTTCTGTTAGGGACAAGGCAAACTATTTTAGAGACAAAGGATGCGGGACAGACTTGGGTCCCGCGTTCTATACCATCAGCTGAAGAAGAGGATTTTAATTACAGATTCAACTCCATAAGCTTCAGAGGGAAGGAAGGTTGGATTGTTGGTAAGCCTGCAATTCTGTTGTACACTAATGATGCTGGGGAAAACTGGAAAAGGGTACCGCTGAGTTCTCAGCTTCCGGGTGATATGGTTTATATAAAGGCAACAGGAGAAAACAGTGCAGAGTTGGTGACTGACGAGGGAGCAATATACAATACTTCAAATGGTGGTTACAACTGGAAGGCTGCTGTACAGGAGAGTGTTTCGGCTACCCTTAACAGAACAGTCTCAAGCGGTATTAGTGGTGCAAGTTACTACACTGGTACCTTTAATACTGTCAATCGTTCCCCAGATGGTAGATATGTTGCTGTTTCAAGCCGTGGAAACTTTTATCTGACTTGGGAACCTGGCCAGGCTTACTGGCAGCCACATAACCGAACAATTGCAAGAAGAATTCAGAACATGGGTTGGAGAGCTGATGGTGGTCTTTGGCTGCTTGTACGTGGTGGTGGAATGTATTTAAGCAAAGGCTCTGGGATGTCGGAGGACTTTGAGGAAGTGTCCGTACAAAGTCGTGGTTTTGGGATTCTTGACATTGGATATCGCTCACAGGATGAAGCTTGGGCAGCTGGAGGAAGCGGGGTTCTATTGAGATCCAGCAATGGTGGTAAGAGCTGGGCTCGTGACAAAGCAGCTGACAATATAGCCGCAAATCTTTATTCTGTGAAGTTTATTGATGACAAAACGGGGTTTGTGCTTGGAAACGATGGAGTTTTGCTTAGATACCTGGGATAGAGATGGTGTATACTCATGGTAAGCTAGTTACTCTTCATTTTGTTAATGTGAATCTTGCGTAGAGATATATTCTACTTTGCTAGTTAACTGGATGCTGTTATTTTGACAAAACCAAATGTAACATTTTTAGTGTTACGGGGCGACCTTGGAAGAAATGAAGTTTTACTAAAAAAAAAAATCCAAGCTAAATTACGAGCTGCATTCCTAAACCTCTTTGCCCTAGTTTACTAAGAATACAAAGATGATTATCAGTCTGCTATATATTAAATGTTTTGTGCAGCTTGCTGAGTTGCTGTAATGGAGCTTCTTCTAACTATAATGGTCATTTTTAACCGTATGCAGGTTCCTCAGTAATTCTGGTCGAGTTTTGTATCTGTTGTATGAGTATTCTTACAATTTTCCTTGTATCCAAGGAAAAACTGAGATGATTCTTTGATTGTCGATATATGATACTGTAATTAAAACAGGACATTTGATTTTGTACCAAGCTACTGTATACCAATCTTGTTGAAAAGCCACAATCTCCTTTTTTGCAAGGTATACCATCATTATTCAGGTTGATTAGCATGAACTGGTTTTGTAAATTCTCAAGAAATCTTCAAGGATCTTTATCTTGAGCCTAGGTTGGCAGATTGTTTTCCATTTTTCTGGCAATTTGTGACTTTTCAGTCTTTTCTTACAGTAAAGTGACACTATTTGGTGATTTAACGAGGAAAAAATAGGTGTTAGCAAGCTTTGATGTAACGGTGTCACAACTTGAGCAGAGGGCGGAGAGGCCCATATCTGAGATGTACGGATAAGACAAGCATTAAAACAAGTGCCATTTTTCAAAGAACAGATGCCATTTTGGAAAAATGAATGTCATTTTTCAAAAACAGATGCCATTTTACAAAAACGGATGTCATTTTTCAAAAAATTTGATTTTGTCATTTAGTGTTTGTCTTTAG

Coding sequence (CDS)

ATGGCGTCTTCAGCACCATTGCAATTTATCGAATGCTGCGCCAATTCCACCACCGTTACCACCAATAAAACCACCGTACTCTACCACTCTATCTCCTCTTCTTCCTCTAACCGCTGCCGTGTCACTCTCTCCCCTCTTACTCATAGACGCCGCTATTCTCCTCCCAGAGCTTGCTCTTCGCCGCAACCGCAACCACAACCGCGAAGGCAGTTCTTAGCTCAATCGGCTGCCGCTGCTGCGGCGGCGTTGTCTCTTTCGCCTTTTCTCTTTCCTCTTCCGGCAAAATCGGAGGACTCGCTTTCTGACTGGGAGAGAGTTTACCTTCCGATTGACCCCGGCGTGGTTCTACTAGATATTGGTTTTGTTCCTGAAGATCCTAATCATGGATTTCTGTTAGGGACAAGGCAAACTATTTTAGAGACAAAGGATGCGGGACAGACTTGGGTCCCGCGTTCTATACCATCAGCTGAAGAAGAGGATTTTAATTACAGATTCAACTCCATAAGCTTCAGAGGGAAGGAAGGTTGGATTGTTGGTAAGCCTGCAATTCTGTTGTACACTAATGATGCTGGGGAAAACTGGAAAAGGGTACCGCTGAGTTCTCAGCTTCCGGGTGATATGGTTTATATAAAGGCAACAGGAGAAAACAGTGCAGAGTTGGTGACTGACGAGGGAGCAATATACAATACTTCAAATGGTGGTTACAACTGGAAGGCTGCTGTACAGGAGAGTGTTTCGGCTACCCTTAACAGAACAGTCTCAAGCGGTATTAGTGGTGCAAGTTACTACACTGGTACCTTTAATACTGTCAATCGTTCCCCAGATGGTAGATATGTTGCTGTTTCAAGCCGTGGAAACTTTTATCTGACTTGGGAACCTGGCCAGGCTTACTGGCAGCCACATAACCGAACAATTGCAAGAAGAATTCAGAACATGGGTTGGAGAGCTGATGGTGGTCTTTGGCTGCTTGTACGTGGTGGTGGAATGTATTTAAGCAAAGGCTCTGGGATGTCGGAGGACTTTGAGGAAGTGTCCGTACAAAGTCGTGGTTTTGGGATTCTTGACATTGGATATCGCTCACAGGATGAAGCTTGGGCAGCTGGAGGAAGCGGGGTTCTATTGAGATCCAGCAATGGTGGTAAGAGCTGGGCTCGTGACAAAGCAGCTGACAATATAGCCGCAAATCTTTATTCTGTGAAGTTTATTGATGACAAAACGGGGTTTGTGCTTGGAAACGATGGAGTTTTGCTTAGATACCTGGGATAG

Protein sequence

MASSAPLQFIECCANSTTVTTNKTTVLYHSISSSSSNRCRVTLSPLTHRRRYSPPRACSSPQPQPQPRRQFLAQSAAAAAAALSLSPFLFPLPAKSEDSLSDWERVYLPIDPGVVLLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNSISFRGKEGWIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAIYNTSNGGYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQSRGFGILDIGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTGFVLGNDGVLLRYLG

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo01129	Spo01129	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo01129.1	Spo01129.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01129.1.utr5p.1	Spo01129.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01129.1.CDS.8	Spo01129.1.CDS.8	CDS
Spo01129.1.CDS.7	Spo01129.1.CDS.7	CDS
Spo01129.1.CDS.6	Spo01129.1.CDS.6	CDS
Spo01129.1.CDS.5	Spo01129.1.CDS.5	CDS
Spo01129.1.CDS.4	Spo01129.1.CDS.4	CDS
Spo01129.1.CDS.3	Spo01129.1.CDS.3	CDS
Spo01129.1.CDS.2	Spo01129.1.CDS.2	CDS
Spo01129.1.CDS.1	Spo01129.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01129.1.utr3p.1	Spo01129.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01129.1.exon.8	Spo01129.1.exon.8	exon
Spo01129.1.exon.7	Spo01129.1.exon.7	exon
Spo01129.1.exon.6	Spo01129.1.exon.6	exon
Spo01129.1.exon.5	Spo01129.1.exon.5	exon
Spo01129.1.exon.4	Spo01129.1.exon.4	exon
Spo01129.1.exon.3	Spo01129.1.exon.3	exon
Spo01129.1.exon.2	Spo01129.1.exon.2	exon
Spo01129.1.exon.1	Spo01129.1.exon.1	exon

Homology

[Close]

BLAST of Spo01129.1 vs. NCBI nr
Match: gi|902232592|gb|KNA22712.1| (hypothetical protein SOVF_031790 [Spinacia oleracea])

HSP 1 Score: 844.0 bits (2179), Expect = 1.200e-241
Identity = 420/421 (99.76%), Postives = 420/421 (99.76%), Query Frame = 1


		  
Query: 1   MASSAPLQFIECCANSTTVTTNKTTVLYHSISSSSSNRCRVTLSPLTHRRRYSPPRACSS 60
           MASSAPLQFIECCANSTTVTTNKTTVLYHSISSSSSNRCRVTLSPLTHRRRYSPPRACSS
Sbjct: 1   MASSAPLQFIECCANSTTVTTNKTTVLYHSISSSSSNRCRVTLSPLTHRRRYSPPRACSS 60

Query: 61  PQPQPQPRRQFLAQSAAAAAAALSLSPFLFPLPAKSEDSLSDWERVYLPIDPGVVLLDIG 120
           PQPQPQPRRQFLAQSAAAAAAALSLSP LFPLPAKSEDSLSDWERVYLPIDPGVVLLDIG
Sbjct: 61  PQPQPQPRRQFLAQSAAAAAAALSLSPSLFPLPAKSEDSLSDWERVYLPIDPGVVLLDIG 120

Query: 121 FVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNSISFRGKEGWIVGK 180
           FVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNSISFRGKEGWIVGK
Sbjct: 121 FVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNSISFRGKEGWIVGK 180

Query: 181 PAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAIYNTSNGGYNWKAA 240
           PAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAIYNTSNGGYNWKAA
Sbjct: 181 PAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAIYNTSNGGYNWKAA 240

Query: 241 VQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAYWQP 300
           VQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAYWQP
Sbjct: 241 VQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAYWQP 300

Query: 301 HNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQSRGFGILDIGYRS 360
           HNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQSRGFGILDIGYRS
Sbjct: 301 HNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQSRGFGILDIGYRS 360

Query: 361 QDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTGFVLGNDGVLLRYL 420
           QDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTGFVLGNDGVLLRYL
Sbjct: 361 QDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTGFVLGNDGVLLRYL 420

Query: 421 G 422
           G
Sbjct: 421 G 421

[Close]

BLAST of Spo01129.1 vs. NCBI nr
Match: gi|731354630|ref|XP_010688703.1| (PREDICTED: photosystem II stability/assembly factor HCF136, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 725.7 bits (1872), Expect = 4.600e-206
Identity = 366/426 (85.92%), Postives = 394/426 (92.49%), Query Frame = 1


		  
Query: 1   MASSAPLQFIECCANSTTVTTNKTTVLYHSISSSSSNRCRVTLSPLTHRRRYSPPRACSS 60
           MASSAPLQF E    ST  T+  T +L+HS+SS +S R RV LSPLT +RRYSPP+ACSS
Sbjct: 1   MASSAPLQFSE----STAATS--THILFHSLSSPTSLRHRVNLSPLTQKRRYSPPKACSS 60

Query: 61  -----PQPQPQPRRQFLAQSAAAAAAALSLSPFLFPLPAKSEDSLSDWERVYLPIDPGVV 120
                PQPQPQPRRQFLA SAAAAAAA +LS  L PL AKSED+LS+WER+YLPID GVV
Sbjct: 61  SPQPQPQPQPQPRRQFLAHSAAAAAAAAALS--LSPLVAKSEDALSEWERIYLPIDAGVV 120

Query: 121 LLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNSISFRGKEG 180
           LLDI FVP+DPNHGFLLGTRQTILETKD GQ+WVPRSI SAEEEDFNYRFNSISFRGKEG
Sbjct: 121 LLDISFVPDDPNHGFLLGTRQTILETKDGGQSWVPRSIASAEEEDFNYRFNSISFRGKEG 180

Query: 181 WIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAIYNTSNGGY 240
           WIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATG+NSAE+VTDEGAIY+TSNGGY
Sbjct: 181 WIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGDNSAEMVTDEGAIYSTSNGGY 240

Query: 241 NWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQ 300
           NWKAAVQE+VSATLNRTVSSGISGASYYTGTFNTVNRSPDG+YVAVSSRGNF+LTWEPGQ
Sbjct: 241 NWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGKYVAVSSRGNFFLTWEPGQ 300

Query: 301 AYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQSRGFGILD 360
           AYWQPHNR+IARRIQNMGWRADGGLWLLVRGGG+YLSKGSG+SEDFEEV+VQSRGFGILD
Sbjct: 301 AYWQPHNRSIARRIQNMGWRADGGLWLLVRGGGLYLSKGSGISEDFEEVTVQSRGFGILD 360

Query: 361 IGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTGFVLGNDGV 420
           +GYRSQDEAWAAGGSG+LLR++NGGKSW RDKAADNIAANLYSVKFID+K GFVLGNDGV
Sbjct: 361 VGYRSQDEAWAAGGSGILLRTTNGGKSWTRDKAADNIAANLYSVKFIDEKIGFVLGNDGV 418

Query: 421 LLRYLG 422
           LLRYLG
Sbjct: 421 LLRYLG 418

[Close]

BLAST of Spo01129.1 vs. NCBI nr
Match: gi|449436353|ref|XP_004135957.1| (PREDICTED: photosystem II stability/assembly factor HCF136, chloroplastic [Cucumis sativus])

HSP 1 Score: 628.6 bits (1620), Expect = 7.700e-177
Identity = 308/374 (82.35%), Postives = 342/374 (91.44%), Query Frame = 1


		  
Query: 55  PRACSSPQPQPQ------PRRQFLAQSAAAAAAALSLSPFLFPL-PAKSEDSLSDWERVY 114
           PR  SS  P+         RR F+A +AAA +  LSLSPF+ P+ PAKSE+SLS+WER+Y
Sbjct: 35  PRTLSSTTPKASLHNSSINRRHFVADTAAAVS--LSLSPFIAPVQPAKSEESLSEWERLY 94

Query: 115 LPIDPGVVLLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNS 174
           LPIDPGVVLLDI FVP+D NHGFLLGTRQTILETKD G+TW PRSIPSAEEEDFNYRFNS
Sbjct: 95  LPIDPGVVLLDIAFVPDDMNHGFLLGTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNS 154

Query: 175 ISFRGKEGWIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAI 234
           ISF+GKEGWIVGKPAILLYT+DAGE+W+R+PLS+QLPGDMVYIKATGE SAE+VTDEGAI
Sbjct: 155 ISFKGKEGWIVGKPAILLYTSDAGESWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAI 214

Query: 235 YNTSNGGYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNF 294
           Y TSN GYNWKAAVQE+VSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNF
Sbjct: 215 YVTSNKGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNF 274

Query: 295 YLTWEPGQAYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQ 354
           YLTWEPGQ +WQPHNR IARRIQNMGWRADGGLWLLVRGGG++LSKG+G+SE+FEEV VQ
Sbjct: 275 YLTWEPGQPFWQPHNRAIARRIQNMGWRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQ 334

Query: 355 SRGFGILDIGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTG 414
           SRGFGILD+GYRS++EAWAAGGSGVLL+++NGG+SW RDKAADNIAANLYSVKFI+DK G
Sbjct: 335 SRGFGILDVGYRSKEEAWAAGGSGVLLKTTNGGRSWTRDKAADNIAANLYSVKFINDKKG 394

Query: 415 FVLGNDGVLLRYLG 422
           FVLGNDGVLL+YLG
Sbjct: 395 FVLGNDGVLLQYLG 406

[Close]

BLAST of Spo01129.1 vs. NCBI nr
Match: gi|659122869|ref|XP_008461367.1| (PREDICTED: photosystem II stability/assembly factor HCF136, chloroplastic [Cucumis melo])

HSP 1 Score: 627.1 bits (1616), Expect = 2.200e-176
Identity = 307/374 (82.09%), Postives = 342/374 (91.44%), Query Frame = 1


		  
Query: 55  PRACSSPQPQPQ------PRRQFLAQSAAAAAAALSLSPFLFPL-PAKSEDSLSDWERVY 114
           PR  SS  P+         RRQF+A +  AAA +LSLSPF+ P+ PAKSE+SLS+WER+Y
Sbjct: 34  PRTISSTSPKASLHNSSINRRQFVADT--AAAVSLSLSPFIAPVQPAKSEESLSEWERLY 93

Query: 115 LPIDPGVVLLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNS 174
           LPIDPGVVLLDI FVP+D NHGFLLGTRQTILETKD G+TW PRSIPSAEEEDFNYRFNS
Sbjct: 94  LPIDPGVVLLDIAFVPDDLNHGFLLGTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNS 153

Query: 175 ISFRGKEGWIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAI 234
           ISF+GKEGWIVGKPAILLYT+DAGE+W+R+PLS+QLPGDMVYIKATGE SAE+VTDEGAI
Sbjct: 154 ISFKGKEGWIVGKPAILLYTSDAGESWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAI 213

Query: 235 YNTSNGGYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNF 294
           Y TSN GYNWKAAVQE+VSATLNRTVSSGISGASYYTGTFNTVNRSPDG YVAVSSRGNF
Sbjct: 214 YVTSNKGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGSYVAVSSRGNF 273

Query: 295 YLTWEPGQAYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQ 354
           YLTWEPGQ +WQPHNR IARRIQNMGWRADGGLWLLVRGGG++LSKG+G+SE+FEEV VQ
Sbjct: 274 YLTWEPGQPFWQPHNRAIARRIQNMGWRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQ 333

Query: 355 SRGFGILDIGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTG 414
           SRGFGILD+GYRS++EAWAAGGSGVLL+++NGG+SW RDKAADNIAANLYSVKFI++K G
Sbjct: 334 SRGFGILDVGYRSKEEAWAAGGSGVLLKTTNGGRSWTRDKAADNIAANLYSVKFINEKKG 393

Query: 415 FVLGNDGVLLRYLG 422
           FVLGNDGVLL+YLG
Sbjct: 394 FVLGNDGVLLQYLG 405

[Close]

BLAST of Spo01129.1 vs. NCBI nr
Match: gi|703090427|ref|XP_010094078.1| (hypothetical protein L484_018094 [Morus notabilis])

HSP 1 Score: 623.6 bits (1607), Expect = 2.500e-175
Identity = 312/390 (80.00%), Postives = 344/390 (88.21%), Query Frame = 1


		  
Query: 42  TLSPLTHRRRYSPPR--------ACSSPQPQPQPRRQFLAQSAAAAAAALSL-SPFLFPL 101
           T SP   R    PPR        + SS       RR+F+A++AA +   LSL SPFL P+
Sbjct: 29  TTSPRHFRSSQPPPRFIPKASSSSSSSSSSSLLCRRRFIAETAAVS---LSLASPFLGPV 88

Query: 102 -PAKSEDSLSDWERVYLPIDPGVVLLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPR 161
            PAKSED+LS+WER YLPIDPGVVLLDI FVP+D NHGFLLGTRQTILETKD G TWVPR
Sbjct: 89  QPAKSEDALSEWERCYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTILETKDGGNTWVPR 148

Query: 162 SIPSAEEEDFNYRFNSISFRGKEGWIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIK 221
           SIPSAE+EDFNYRFNSISF GKEGWIVGKPAILLYT+DAGENW+R+ LS+QLPGDMVYIK
Sbjct: 149 SIPSAEDEDFNYRFNSISFIGKEGWIVGKPAILLYTSDAGENWERIALSAQLPGDMVYIK 208

Query: 222 ATGENSAELVTDEGAIYNTSNGGYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVN 281
           ATGE  AE+VTD+GAIY TSN GYNW+AAVQE+VSATLNRTVSSGISGASYYTGTFNTVN
Sbjct: 209 ATGEKGAEMVTDQGAIYVTSNKGYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVN 268

Query: 282 RSPDGRYVAVSSRGNFYLTWEPGQAYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYL 341
           RSPDGRYVAVSSRGNFYLTWEPGQ +WQPHNR +ARRIQNMGWRADGGLWLLVRGGG++L
Sbjct: 269 RSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLFL 328

Query: 342 SKGSGMSEDFEEVSVQSRGFGILDIGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADN 401
           SKG+G++EDFEEV+VQSRGFGILD+GYRSQ+EAWAAGGSG+LLR++NGGKSW RDKAADN
Sbjct: 329 SKGTGITEDFEEVAVQSRGFGILDVGYRSQEEAWAAGGSGILLRTTNGGKSWIRDKAADN 388

Query: 402 IAANLYSVKFIDDKTGFVLGNDGVLLRYLG 422
           IAANLYSVKFIDDK GFVLGNDGVLLRYLG
Sbjct: 389 IAANLYSVKFIDDKKGFVLGNDGVLLRYLG 415

[Close]

BLAST of Spo01129.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RV67_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_031790 PE=4 SV=1)

HSP 1 Score: 844.0 bits (2179), Expect = 8.100e-242
Identity = 420/421 (99.76%), Postives = 420/421 (99.76%), Query Frame = 1


		  
Query: 1   MASSAPLQFIECCANSTTVTTNKTTVLYHSISSSSSNRCRVTLSPLTHRRRYSPPRACSS 60
           MASSAPLQFIECCANSTTVTTNKTTVLYHSISSSSSNRCRVTLSPLTHRRRYSPPRACSS
Sbjct: 1   MASSAPLQFIECCANSTTVTTNKTTVLYHSISSSSSNRCRVTLSPLTHRRRYSPPRACSS 60

Query: 61  PQPQPQPRRQFLAQSAAAAAAALSLSPFLFPLPAKSEDSLSDWERVYLPIDPGVVLLDIG 120
           PQPQPQPRRQFLAQSAAAAAAALSLSP LFPLPAKSEDSLSDWERVYLPIDPGVVLLDIG
Sbjct: 61  PQPQPQPRRQFLAQSAAAAAAALSLSPSLFPLPAKSEDSLSDWERVYLPIDPGVVLLDIG 120

Query: 121 FVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNSISFRGKEGWIVGK 180
           FVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNSISFRGKEGWIVGK
Sbjct: 121 FVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNSISFRGKEGWIVGK 180

Query: 181 PAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAIYNTSNGGYNWKAA 240
           PAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAIYNTSNGGYNWKAA
Sbjct: 181 PAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAIYNTSNGGYNWKAA 240

Query: 241 VQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAYWQP 300
           VQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAYWQP
Sbjct: 241 VQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAYWQP 300

Query: 301 HNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQSRGFGILDIGYRS 360
           HNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQSRGFGILDIGYRS
Sbjct: 301 HNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQSRGFGILDIGYRS 360

Query: 361 QDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTGFVLGNDGVLLRYL 420
           QDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTGFVLGNDGVLLRYL
Sbjct: 361 QDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTGFVLGNDGVLLRYL 420

Query: 421 G 422
           G
Sbjct: 421 G 421

[Close]

BLAST of Spo01129.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EI06_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g203050 PE=4 SV=1)

HSP 1 Score: 725.7 bits (1872), Expect = 3.200e-206
Identity = 366/426 (85.92%), Postives = 394/426 (92.49%), Query Frame = 1


		  
Query: 1   MASSAPLQFIECCANSTTVTTNKTTVLYHSISSSSSNRCRVTLSPLTHRRRYSPPRACSS 60
           MASSAPLQF E    ST  T+  T +L+HS+SS +S R RV LSPLT +RRYSPP+ACSS
Sbjct: 1   MASSAPLQFSE----STAATS--THILFHSLSSPTSLRHRVNLSPLTQKRRYSPPKACSS 60

Query: 61  -----PQPQPQPRRQFLAQSAAAAAAALSLSPFLFPLPAKSEDSLSDWERVYLPIDPGVV 120
                PQPQPQPRRQFLA SAAAAAAA +LS  L PL AKSED+LS+WER+YLPID GVV
Sbjct: 61  SPQPQPQPQPQPRRQFLAHSAAAAAAAAALS--LSPLVAKSEDALSEWERIYLPIDAGVV 120

Query: 121 LLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNSISFRGKEG 180
           LLDI FVP+DPNHGFLLGTRQTILETKD GQ+WVPRSI SAEEEDFNYRFNSISFRGKEG
Sbjct: 121 LLDISFVPDDPNHGFLLGTRQTILETKDGGQSWVPRSIASAEEEDFNYRFNSISFRGKEG 180

Query: 181 WIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAIYNTSNGGY 240
           WIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATG+NSAE+VTDEGAIY+TSNGGY
Sbjct: 181 WIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGDNSAEMVTDEGAIYSTSNGGY 240

Query: 241 NWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQ 300
           NWKAAVQE+VSATLNRTVSSGISGASYYTGTFNTVNRSPDG+YVAVSSRGNF+LTWEPGQ
Sbjct: 241 NWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGKYVAVSSRGNFFLTWEPGQ 300

Query: 301 AYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQSRGFGILD 360
           AYWQPHNR+IARRIQNMGWRADGGLWLLVRGGG+YLSKGSG+SEDFEEV+VQSRGFGILD
Sbjct: 301 AYWQPHNRSIARRIQNMGWRADGGLWLLVRGGGLYLSKGSGISEDFEEVTVQSRGFGILD 360

Query: 361 IGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTGFVLGNDGV 420
           +GYRSQDEAWAAGGSG+LLR++NGGKSW RDKAADNIAANLYSVKFID+K GFVLGNDGV
Sbjct: 361 VGYRSQDEAWAAGGSGILLRTTNGGKSWTRDKAADNIAANLYSVKFIDEKIGFVLGNDGV 418

Query: 421 LLRYLG 422
           LLRYLG
Sbjct: 421 LLRYLG 418

[Close]

BLAST of Spo01129.1 vs. UniProtKB/TrEMBL
Match: A0A0A0K5Y1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G420730 PE=4 SV=1)

HSP 1 Score: 628.6 bits (1620), Expect = 5.400e-177
Identity = 308/374 (82.35%), Postives = 342/374 (91.44%), Query Frame = 1


		  
Query: 55  PRACSSPQPQPQ------PRRQFLAQSAAAAAAALSLSPFLFPL-PAKSEDSLSDWERVY 114
           PR  SS  P+         RR F+A +AAA +  LSLSPF+ P+ PAKSE+SLS+WER+Y
Sbjct: 35  PRTLSSTTPKASLHNSSINRRHFVADTAAAVS--LSLSPFIAPVQPAKSEESLSEWERLY 94

Query: 115 LPIDPGVVLLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNS 174
           LPIDPGVVLLDI FVP+D NHGFLLGTRQTILETKD G+TW PRSIPSAEEEDFNYRFNS
Sbjct: 95  LPIDPGVVLLDIAFVPDDMNHGFLLGTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNS 154

Query: 175 ISFRGKEGWIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAI 234
           ISF+GKEGWIVGKPAILLYT+DAGE+W+R+PLS+QLPGDMVYIKATGE SAE+VTDEGAI
Sbjct: 155 ISFKGKEGWIVGKPAILLYTSDAGESWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAI 214

Query: 235 YNTSNGGYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNF 294
           Y TSN GYNWKAAVQE+VSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNF
Sbjct: 215 YVTSNKGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNF 274

Query: 295 YLTWEPGQAYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQ 354
           YLTWEPGQ +WQPHNR IARRIQNMGWRADGGLWLLVRGGG++LSKG+G+SE+FEEV VQ
Sbjct: 275 YLTWEPGQPFWQPHNRAIARRIQNMGWRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQ 334

Query: 355 SRGFGILDIGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTG 414
           SRGFGILD+GYRS++EAWAAGGSGVLL+++NGG+SW RDKAADNIAANLYSVKFI+DK G
Sbjct: 335 SRGFGILDVGYRSKEEAWAAGGSGVLLKTTNGGRSWTRDKAADNIAANLYSVKFINDKKG 394

Query: 415 FVLGNDGVLLRYLG 422
           FVLGNDGVLL+YLG
Sbjct: 395 FVLGNDGVLLQYLG 406

[Close]

BLAST of Spo01129.1 vs. UniProtKB/TrEMBL
Match: W9R3A0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018094 PE=4 SV=1)

HSP 1 Score: 623.6 bits (1607), Expect = 1.700e-175
Identity = 312/390 (80.00%), Postives = 344/390 (88.21%), Query Frame = 1


		  
Query: 42  TLSPLTHRRRYSPPR--------ACSSPQPQPQPRRQFLAQSAAAAAAALSL-SPFLFPL 101
           T SP   R    PPR        + SS       RR+F+A++AA +   LSL SPFL P+
Sbjct: 29  TTSPRHFRSSQPPPRFIPKASSSSSSSSSSSLLCRRRFIAETAAVS---LSLASPFLGPV 88

Query: 102 -PAKSEDSLSDWERVYLPIDPGVVLLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPR 161
            PAKSED+LS+WER YLPIDPGVVLLDI FVP+D NHGFLLGTRQTILETKD G TWVPR
Sbjct: 89  QPAKSEDALSEWERCYLPIDPGVVLLDIAFVPDDLNHGFLLGTRQTILETKDGGNTWVPR 148

Query: 162 SIPSAEEEDFNYRFNSISFRGKEGWIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIK 221
           SIPSAE+EDFNYRFNSISF GKEGWIVGKPAILLYT+DAGENW+R+ LS+QLPGDMVYIK
Sbjct: 149 SIPSAEDEDFNYRFNSISFIGKEGWIVGKPAILLYTSDAGENWERIALSAQLPGDMVYIK 208

Query: 222 ATGENSAELVTDEGAIYNTSNGGYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVN 281
           ATGE  AE+VTD+GAIY TSN GYNW+AAVQE+VSATLNRTVSSGISGASYYTGTFNTVN
Sbjct: 209 ATGEKGAEMVTDQGAIYVTSNKGYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVN 268

Query: 282 RSPDGRYVAVSSRGNFYLTWEPGQAYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYL 341
           RSPDGRYVAVSSRGNFYLTWEPGQ +WQPHNR +ARRIQNMGWRADGGLWLLVRGGG++L
Sbjct: 269 RSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLFL 328

Query: 342 SKGSGMSEDFEEVSVQSRGFGILDIGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADN 401
           SKG+G++EDFEEV+VQSRGFGILD+GYRSQ+EAWAAGGSG+LLR++NGGKSW RDKAADN
Sbjct: 329 SKGTGITEDFEEVAVQSRGFGILDVGYRSQEEAWAAGGSGILLRTTNGGKSWIRDKAADN 388

Query: 402 IAANLYSVKFIDDKTGFVLGNDGVLLRYLG 422
           IAANLYSVKFIDDK GFVLGNDGVLLRYLG
Sbjct: 389 IAANLYSVKFIDDKKGFVLGNDGVLLRYLG 415

[Close]

BLAST of Spo01129.1 vs. UniProtKB/TrEMBL
Match: A0A061E463_THECC (Photosystem II stability/assembly factor, chloroplast (HCF136) isoform 1 OS=Theobroma cacao GN=TCM_007737 PE=4 SV=1)

HSP 1 Score: 622.9 bits (1605), Expect = 2.900e-175
Identity = 300/367 (81.74%), Postives = 334/367 (91.01%), Query Frame = 1


		  
Query: 55  PRACSSPQPQPQPRRQFLAQSAAAAAAALSLSPFLFPLPAKSEDSLSDWERVYLPIDPGV 114
           P   SS  P    RRQ ++Q+A+ + +  +LS     LPAKSE+ LS+WERVYLPIDPGV
Sbjct: 47  PHHSSSSSPTLVNRRQLISQTASLSLSVATLSAL--QLPAKSEEVLSEWERVYLPIDPGV 106

Query: 115 VLLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYRFNSISFRGKE 174
           VLLDI FVP+DPNHGFLLGTRQTILETKD G TWVPRSIPSAE+EDFNYRFNSISF+GKE
Sbjct: 107 VLLDIAFVPDDPNHGFLLGTRQTILETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKE 166

Query: 175 GWIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDEGAIYNTSNGG 234
           GWIVGKPAILLYT+DAGE+W+R+PLS+QLPGDMVYIKAT E SAE+VTD+GAIY TSN G
Sbjct: 167 GWIVGKPAILLYTSDAGESWERIPLSAQLPGDMVYIKATDEKSAEMVTDQGAIYVTSNRG 226

Query: 235 YNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG 294
           +NW+AAVQE+VSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG
Sbjct: 227 FNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPG 286

Query: 295 QAYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEVSVQSRGFGIL 354
           Q +WQPHNR +ARRIQNMGWRADGGLWLLVRGGG++LSKG+G++EDFEE+ VQSRGFGIL
Sbjct: 287 QPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLFLSKGTGITEDFEEIPVQSRGFGIL 346

Query: 355 DIGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTGFVLGNDG 414
           D+GYRS +EAWAAGGSGVLLR++NGGKSW RDKAADNIAANLYSVKFIDDK GFVLGNDG
Sbjct: 347 DVGYRSMEEAWAAGGSGVLLRTTNGGKSWTRDKAADNIAANLYSVKFIDDKKGFVLGNDG 406

Query: 415 VLLRYLG 422
           VLLRYLG
Sbjct: 407 VLLRYLG 411

[Close]

BLAST of Spo01129.1 vs. ExPASy Swiss-Prot
Match: P2SAF_ARATH (Photosystem II stability/assembly factor HCF136, chloroplastic OS=Arabidopsis thaliana GN=HCF136 PE=1 SV=1)

HSP 1 Score: 607.8 bits (1566), Expect = 8.800e-173
Identity = 295/377 (78.25%), Postives = 333/377 (88.33%), Query Frame = 1


		  
Query: 55  PRACSSPQPQPQP----------RRQFLAQSAAAAAAALSLSPFLFPLPAKSEDSLSDWE 114
           P+A SSP P P P          RR+ L QSAA +   LSLS  + P  A++++ LS+WE
Sbjct: 32  PKASSSPPPSPSPSSSSSSLSFSRRELLYQSAAVS---LSLSSIVGP--ARADEQLSEWE 91

Query: 115 RVYLPIDPGVVLLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYR 174
           RV+LPIDPGVVLLDI FVP++P+ GFLLGTRQT+LETKD G TW PRSIPSAEEEDFNYR
Sbjct: 92  RVFLPIDPGVVLLDIAFVPDEPSRGFLLGTRQTLLETKDGGSTWNPRSIPSAEEEDFNYR 151

Query: 175 FNSISFRGKEGWIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDE 234
           FNSISF+GKEGWI+GKPAILLYT DAGENW R+PLSSQLPGDMV+IKAT + SAE+VTDE
Sbjct: 152 FNSISFKGKEGWIIGKPAILLYTADAGENWDRIPLSSQLPGDMVFIKATEDKSAEMVTDE 211

Query: 235 GAIYNTSNGGYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSR 294
           GAIY TSN GYNWKAA+QE+VSATLNRTVSSGISGASYYTGTF+ VNRSPDGRYVAVSSR
Sbjct: 212 GAIYVTSNRGYNWKAAIQETVSATLNRTVSSGISGASYYTGTFSAVNRSPDGRYVAVSSR 271

Query: 295 GNFYLTWEPGQAYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEV 354
           GNF+LTWEPGQ YWQPHNR +ARRIQNMGWRADGGLWLLVRGGG+YLSKG+G++E+FEEV
Sbjct: 272 GNFFLTWEPGQPYWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGITEEFEEV 331

Query: 355 SVQSRGFGILDIGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDD 414
            VQSRGFGILD+GYRS++EAWAAGGSG+LLR+ NGGKSW RDKAADNIAANLY+VKF+DD
Sbjct: 332 PVQSRGFGILDVGYRSEEEAWAAGGSGILLRTRNGGKSWNRDKAADNIAANLYAVKFVDD 391

Query: 415 KTGFVLGNDGVLLRYLG 422
           K GFVLGNDGVLLRY+G
Sbjct: 392 KKGFVLGNDGVLLRYVG 403

[Close]

BLAST of Spo01129.1 vs. ExPASy Swiss-Prot
Match: P2SAF_ORYSJ (Photosystem II stability/assembly factor HCF136, chloroplastic OS=Oryza sativa subsp. japonica GN=HCF136 PE=3 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 4.200e-167
Identity = 300/428 (70.09%), Postives = 342/428 (79.91%), Query Frame = 1


		  
Query: 20  TTNKTTVLYHSISSSSSNRCRVTLSPLTHRRRYSPPRACSSPQPQPQPRRQFLAQSAAAA 79
           TT    +  H + SSS  RCR+ L P  H    S  R            R+F+A +A A+
Sbjct: 3   TTASLHLHLHLLLSSSRRRCRL-LVPRAHTDSISTGR------------RRFIADTATAS 62

Query: 80  AAALSLSPFLFPLP----AKSEDSLSDWERVYLPIDPGVVLLDIGFVPEDPNHGFLLGTR 139
           AAA ++ P + P      A    SLS+WERV LPIDPGVVLLDI FVP+DP+HGFLLGTR
Sbjct: 63  AAA-AVGPLVLPRTPLARADQPPSLSEWERVLLPIDPGVVLLDIAFVPDDPSHGFLLGTR 122

Query: 140 QTILETKDAGQTWVPRSIPSAEEEDFNYRFNSISFRGKEGWIVGKPAILLYTNDAGENWK 199
           QTILETK+ G TW PRSIPSAE+EDFNYRFNS+SF GKEGWI+GKPAILL+T+DAG++W+
Sbjct: 123 QTILETKNGGNTWFPRSIPSAEDEDFNYRFNSVSFMGKEGWIIGKPAILLHTSDAGDSWE 182

Query: 200 RVPLSSQLPGDMVYIKATGENSAELVTDEGAIYNTSNGGYNWKAAVQESVSATLNRTVSS 259
           R+PLS+QLPG+MVYIKATGE SAE+VTDEGAIY TSN GYNWKAAVQE+VSATLNRTVSS
Sbjct: 183 RIPLSAQLPGNMVYIKATGEQSAEMVTDEGAIYVTSNRGYNWKAAVQETVSATLNRTVSS 242

Query: 260 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQAYWQPHNRTIARRIQNMGWR 319
           GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQ +WQPHNR +ARRIQNMGWR
Sbjct: 243 GISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWR 302

Query: 320 ADGGLWLLVRGGGMYLSKGSG----------------------MSEDFEEVSVQSRGFGI 379
           ADGGLWLLVRGGG++LSKGSG                      ++EDFEE SVQSRGFGI
Sbjct: 303 ADGGLWLLVRGGGLFLSKGSGFQFFYRGLNDAHAISYLHPPNQITEDFEEASVQSRGFGI 362

Query: 380 LDIGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDDKTGFVLGND 422
           LD+GYRS+DEAWAAGGSGVLL+++NGGK+W RDKAADNIAANLYSVKF+ D  G+VLGND
Sbjct: 363 LDVGYRSKDEAWAAGGSGVLLKTTNGGKTWVRDKAADNIAANLYSVKFLGDNKGYVLGND 416

[Close]

BLAST of Spo01129.1 vs. ExPASy Swiss-Prot
Match: P2SAF_GUITH (Photosystem II stability/assembly factor HCF136, chloroplastic OS=Guillardia theta GN=hcf136 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.100e-90
Identity = 158/336 (47.02%), Postives = 229/336 (68.15%), Query Frame = 1


		  
Query: 93  PAKSEDSLSDWERVYLPIDPGVVLLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPRS 152
           P  +  + + W +V LP+D   VL DI F   +  HG+L+G++ T LET D G TWVPR+
Sbjct: 61  PKFTHANTTSWTKVDLPVDS--VLFDIEFTDPECKHGWLVGSKGTFLETDDGGNTWVPRT 120

Query: 153 IPSAE-EEDFNYRFNSISFRGKEGWIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIK 212
             + + +E+  YRF +ISF G+EGW++GKPAI+LYT D G+ W RVP+S +LPG+   IK
Sbjct: 121 FANLDPDEELTYRFENISFEGQEGWVIGKPAIILYTKDGGKTWFRVPVSPKLPGEPCLIK 180

Query: 213 ATGENSAELVTDEGAIYNTSNGGYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVN 272
           A G  SAEL T  GAIY T+N G NWKA V+E++ +TLNRT+SSG+SGASY+TG    V 
Sbjct: 181 ALGSESAELTTTSGAIYVTNNAGRNWKAQVKETIDSTLNRTISSGVSGASYFTGNVINVI 240

Query: 273 RSPDGRYVAVSSRGNFYLTWEPGQAYWQPHNRTIARRIQNMGWRADG---GLWLLVRGGG 332
           R+ +G+Y+A+SSRGNFYLTWEPGQ +W P  R  +RRIQ+MG+  +    G+W+  RGGG
Sbjct: 241 RNSEGKYLAISSRGNFYLTWEPGQDFWIPRARETSRRIQSMGFIQNDNQKGIWMSTRGGG 300

Query: 333 MYLSK-----GSGMSEDFEEVSVQSRGFGILDIGYRSQDEAWAAGGSGVLLRSSNGGKSW 392
           + +S       S  S +FE + +++ G+GILD  + +  + W   G G++  S++ GK+W
Sbjct: 301 LSVSTKNFDFESISSFNFENIDIKTGGYGILDAAFVNDKDIWIICGGGIVYNSTDKGKNW 360

Query: 393 ARDKAADNIAANLYSVKFIDDKTGFVLGNDGVLLRY 420
            +    D ++ NLY +KF+++  GF+LG++G+LLRY
Sbjct: 361 TKVDGIDKLSGNLYKIKFVNNNKGFILGSNGLLLRY 394

[Close]

BLAST of Spo01129.1 vs. ExPASy Swiss-Prot
Match: YC48L_SYNY3 (Ycf48-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr2034 PE=3 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 5.500e-82
Identity = 152/322 (47.20%), Postives = 202/322 (62.73%), Query Frame = 1


		  
Query: 99  SLSDWERVYLPIDPGVVLLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEE 158
           + + W+ + L  D      DI F  EDPNHG+L+GT++TI ET D G TW  + I   EE
Sbjct: 36  AFNPWQEIALETDS--TFADIAFT-EDPNHGWLVGTKETIFETTDGGDTWEQKLIDLGEE 95

Query: 159 EDFNYRFNSISFRGKEGWIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSA 218
           +     F+++SF G EGWI GKP+ILL+T D G+ W R+PLS +LPG    I A G  +A
Sbjct: 96  K---ASFSAVSFSGNEGWITGKPSILLHTTDGGQTWARIPLSEKLPGAPYSIIALGPQTA 155

Query: 219 ELVTDEGAIYNTSNGGYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRY 278
           E++TD GAIY T+NGG NWKA V+ +V                   G   T+ RS DGRY
Sbjct: 156 EMITDLGAIYKTTNGGKNWKALVEGAV-------------------GVARTIQRSTDGRY 215

Query: 279 VAVSSRGNFYLTWEPGQAYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMS 338
           VAVS+RGNFY TW PGQ  W PHNR  +RR+Q MG+  DG LWLL RGG +  S      
Sbjct: 216 VAVSARGNFYSTWAPGQTEWTPHNRNSSRRLQTMGYGKDGQLWLLARGGQLQFSTDPDAE 275

Query: 339 EDFEEVSVQSRG-FGILDIGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLY 398
           E  + ++ Q +G +G+LD+ +R+ +E W AG SG LL S +GG++WA+D   ++I ANLY
Sbjct: 276 EWSDVIAPQDKGSWGLLDLSFRTPEEVWVAGASGNLLMSQDGGQTWAKDTGVEDIPANLY 332

Query: 399 SVKFIDDKTGFVLGNDGVLLRY 420
            V F+  + GFVLG DG+LL+Y
Sbjct: 336 RVVFLSPEKGFVLGQDGILLKY 332

[Close]

BLAST of Spo01129.1 vs. ExPASy Swiss-Prot
Match: P2SAF_CYAPA (Photosystem II stability/assembly factor HCF136 OS=Cyanophora paradoxa GN=hcf136 PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 3.000e-80
Identity = 150/323 (46.44%), Postives = 195/323 (60.37%), Query Frame = 1


		  
Query: 103 WERVYLPIDPGVVLLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFN 162
           WE++  P++   +LLDIGFVP+ P  G+LLGTR T+ ET D G+TW  RS+     ED  
Sbjct: 33  WEQI--PLNTDEILLDIGFVPDQPQRGWLLGTRSTLFETTDKGKTWELRSL---NLEDDK 92

Query: 163 YRFNSISFRGKEGWIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVT 222
           YR NSISF GKEGW+ GKPAILL+T D G +W R+PLS+QLPGD   I A G   AEL T
Sbjct: 93  YRLNSISFSGKEGWVTGKPAILLHTTDGGSSWSRIPLSNQLPGDPALITALGTGKAELAT 152

Query: 223 DEGAIYNTSNGGYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVS 282
           D GAIY T N G  WKA +QE +                   G   TV RS +G YVAVS
Sbjct: 153 DIGAIYRTENSGQTWKAQIQEPL-------------------GVIRTVARSENGSYVAVS 212

Query: 283 SRGNFYLTWEPGQAYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFE 342
           ++GNFY TW+ G   W  H R  +RRIQ+MG+  +  LW+L RGG ++ S      E   
Sbjct: 213 AKGNFYSTWKEGDDKWISHPRQSSRRIQSMGFTNNNRLWMLTRGGQLWFSSNDSFDEPNW 272

Query: 343 EVSVQSR-----GFGILDIGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLY 402
           E           G G+L++ +++  E W +GGSG+LL S + G +W ++ + DNI +N Y
Sbjct: 273 EGPKTPEGKVGFGLGLLNLAFKTPTEIWVSGGSGILLSSQDTGNTWKKETSTDNIPSNFY 331

Query: 403 SVKFIDDKTGFVLGNDGVLLRYL 421
            + FID + GFVLGN G LLRY+
Sbjct: 333 KISFIDKEVGFVLGNQGTLLRYV 331

[Close]

BLAST of Spo01129.1 vs. TAIR (Arabidopsis)
Match: AT5G23120.1 (photosystem II stability/assembly factor, chloroplast (HCF136))

HSP 1 Score: 607.8 bits (1566), Expect = 4.900e-174
Identity = 295/377 (78.25%), Postives = 333/377 (88.33%), Query Frame = 1


		  
Query: 55  PRACSSPQPQPQP----------RRQFLAQSAAAAAAALSLSPFLFPLPAKSEDSLSDWE 114
           P+A SSP P P P          RR+ L QSAA +   LSLS  + P  A++++ LS+WE
Sbjct: 32  PKASSSPPPSPSPSSSSSSLSFSRRELLYQSAAVS---LSLSSIVGP--ARADEQLSEWE 91

Query: 115 RVYLPIDPGVVLLDIGFVPEDPNHGFLLGTRQTILETKDAGQTWVPRSIPSAEEEDFNYR 174
           RV+LPIDPGVVLLDI FVP++P+ GFLLGTRQT+LETKD G TW PRSIPSAEEEDFNYR
Sbjct: 92  RVFLPIDPGVVLLDIAFVPDEPSRGFLLGTRQTLLETKDGGSTWNPRSIPSAEEEDFNYR 151

Query: 175 FNSISFRGKEGWIVGKPAILLYTNDAGENWKRVPLSSQLPGDMVYIKATGENSAELVTDE 234
           FNSISF+GKEGWI+GKPAILLYT DAGENW R+PLSSQLPGDMV+IKAT + SAE+VTDE
Sbjct: 152 FNSISFKGKEGWIIGKPAILLYTADAGENWDRIPLSSQLPGDMVFIKATEDKSAEMVTDE 211

Query: 235 GAIYNTSNGGYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSR 294
           GAIY TSN GYNWKAA+QE+VSATLNRTVSSGISGASYYTGTF+ VNRSPDGRYVAVSSR
Sbjct: 212 GAIYVTSNRGYNWKAAIQETVSATLNRTVSSGISGASYYTGTFSAVNRSPDGRYVAVSSR 271

Query: 295 GNFYLTWEPGQAYWQPHNRTIARRIQNMGWRADGGLWLLVRGGGMYLSKGSGMSEDFEEV 354
           GNF+LTWEPGQ YWQPHNR +ARRIQNMGWRADGGLWLLVRGGG+YLSKG+G++E+FEEV
Sbjct: 272 GNFFLTWEPGQPYWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGITEEFEEV 331

Query: 355 SVQSRGFGILDIGYRSQDEAWAAGGSGVLLRSSNGGKSWARDKAADNIAANLYSVKFIDD 414
            VQSRGFGILD+GYRS++EAWAAGGSG+LLR+ NGGKSW RDKAADNIAANLY+VKF+DD
Sbjct: 332 PVQSRGFGILDVGYRSEEEAWAAGGSGILLRTRNGGKSWNRDKAADNIAANLYAVKFVDD 391

Query: 415 KTGFVLGNDGVLLRYLG 422
           K GFVLGNDGVLLRY+G
Sbjct: 392 KKGFVLGNDGVLLRYVG 403

The following BLAST results are available for this feature:

BLAST of Spo01129.1 vs. NCBI nr
BLAST of Spo01129.1 vs. UniProtKB/TrEMBL
BLAST of Spo01129.1 vs. ExPASy Swiss-Prot
BLAST of Spo01129.1 vs. TAIR (Arabidopsis)

BLAST of Spo01129.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902232592\|gb\|KNA22712.1\|	1.2e-241	99.7	hypothetical protein SOVF_0317...	[more]
gi\|731354630\|ref\|XP_010688703.1\|	4.6e-206	85.9	PREDICTED: photosystem II stab...	[more]
gi\|449436353\|ref\|XP_004135957.1\|	7.7e-177	82.3	PREDICTED: photosystem II stab...	[more]
gi\|659122869\|ref\|XP_008461367.1\|	2.2e-176	82.0	PREDICTED: photosystem II stab...	[more]
gi\|703090427\|ref\|XP_010094078.1\|	2.5e-175	80.0	hypothetical protein L484_0180...	[more]

BLAST of Spo01129.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RV67_SPIOL	8.1e-242	99.7	Uncharacterized protein OS=Spi...	[more]
A0A0J8EI06_BETVU	3.2e-206	85.9	Uncharacterized protein OS=Bet...	[more]
A0A0A0K5Y1_CUCSA	5.4e-177	82.3	Uncharacterized protein OS=Cuc...	[more]
W9R3A0_9ROSA	1.7e-175	80.0	Uncharacterized protein OS=Mor...	[more]
A0A061E463_THECC	2.9e-175	81.7	Photosystem II stability/assem...	[more]

BLAST of Spo01129.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
P2SAF_ARATH	8.8e-173	78.2	Photosystem II stability/assem...	[more]
P2SAF_ORYSJ	4.2e-167	70.0	Photosystem II stability/assem...	[more]
P2SAF_GUITH	1.1e-90	47.0	Photosystem II stability/assem...	[more]
YC48L_SYNY3	5.5e-82	47.2	Ycf48-like protein OS=Synechoc...	[more]
P2SAF_CYAPA	3.0e-80	46.4	Photosystem II stability/assem...	[more]

BLAST of Spo01129.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G23120.1	4.9e-174	78.2	photosystem II stability/assem...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019546	Twin-arginine translocation pathway, signal sequence, bacterial/archaeal	TIGRFAMs	TIGR01409	TIGR01409	coord: 68..94 score: 0.
IPR028203	Photosynthesis system II assembly factor Ycf48/Hcf136-like domain	PFAM	PF14870	PSII_BNR	coord: 99..419 score: 2.3E
None	No IPR available	GENE3D	2.130.10.140		coord: 95..415 score: 2.0
None	No IPR available	PANTHER	PTHR32010	FAMILY NOT NAMED	coord: 26..421 score: 4.7E
None	No IPR available	PANTHER	PTHR32010:SF6	PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC	coord: 26..421 score: 4.7E
None	No IPR available	unknown	SSF110296	Oligoxyloglucan reducing end-specific cellobiohydrolase	coord: 103..420 score: 1.03

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0006364	rRNA processing
biological_process	GO:0010114	response to red light
biological_process	GO:0010218	response to far red light
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0009637	response to blue light
biological_process	GO:0010304	PSII associated light-harvesting complex II catabolic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0042793	plastid transcription
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0042744	hydrogen peroxide catabolic process
biological_process	GO:0009902	chloroplast relocation
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009533	chloroplast stromal thylakoid
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0031977	thylakoid lumen