Spo01342.1 (mRNA) | SpinachBase

Overview


Name	Spo01342.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	LisH and RanBPM domain protein
Location	chr4 : 14195777 .. 14205437 (-)
Sequence length	1133

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAATATTTTGGGTTGTTCGTCAGCTTGCACATATCCAGGAATCCATGGTAATAATCAAATCATATCTATTTACTTTATTATTGTGATTTTATTAGTTTTATGTCACTTTCTTTTTGTTGTTTTTCGGTTTTTCACCAATCACCATACATTGTGCGTTCGAGTGTGATTGATTGTTAAAGATCGTATCATGGGCAGGCTACGTCGAAAAAGGTTATAACAAAGGAAGAGTGGGAGAAAAAACTTAAAGATGTAAAGATTAGAAAGGAGGATATGAACAAATTAGTGATGAATTTTCTTGTCACCGAGGGTTATGTTGATGCTGCCGAGAAGTTCCGTACGGAGTCTGGAACCGAACGTATCCTTTCTTTGTAATTTAATTTATTTCAGTACGAAATTATGATGTTGTAGTTCAGTTCTATTTAGTGTCGTGGCAATCTACAGTTTGCGTCTCCTTATTGATTAATAGCAGATATAGATCTCGCAACGATCATGGATCGAATGGCGGTTAAGAAGGCTGTACAGTGTGGGAATGTGGAGGACGCGATTGAGAAAGTAAATGATTTAAATCCAGAGGTCAGTGCACCTATACACACCAGTTGCAGTTCATCAGATTAGAGTATTGTTTTCTTTTTTGCTAACTAATAGTAGTGGTTTTCTGTTTCTAAAATCCCGTCTTTTCAAATTAAGTATGCTAATGAGCTTGATAGTGTGATGCTTCCCACCTGTCCATTCAATATTTTGCTGTAAAAATCTGTTCTTTACAACTTCATCCCTTCGACTCACCCAGTGTTTTGGCTCCAGAAAGGCCTTACTGGTGAGGCTTTTGACCTAGAGAGTGTTAAACGTTAAAATTGTAGCCTAGTGGTTCAGTATAGCTCAAAATCTCAAATACTGATAGCCCAAATTAAGTCTTCACTTATCATTAGTCATTTCTTAGGACCTTAGGAGCAGAGGAGGGGATTGCTATGCCTAACAAGCATCCTATTACCTAGACGGTGTTCATCAATCTAAAATAGCTCTTGACCAACCAGAAATAGAATAATAAGTGTCAAGTAGCAACAATTTGTGCCTGAATGGCTGCACCAACTAGGCTTCCCTTGGCCTCTACTTATTATTATAGTTTGTTCTACTCATGAGGTTCAAATTGAACCGTTTATACACATGCAGCACAACTATGACTGCAGATGATATACCCTTCTTGGTCTTTTACGGTCTTGTCAGTTGTCAGCTTGCGTTCTTATAAACATACTGTTGCAAGTAGGACTAACTAGCTTGTCAAAGACCATCTTTTTTTCTCCAATTATTGTAACTAGGCATAAACTAGCCCTTATGTGACCCCAATATAAAGTTGGCCCCAGTGACCTCCATAAGTCATTCGAACGTGTTTCTCTTACCTATTGTCCTCTCCTGAGGTTCCTTGGGTTATATGGCTGATATGCTCTACTGATCGTGTCTTAGGCTCCTTGAATGAATATCACCCCTTTAGATTTTTGTGTTAATAACATTTGAGGTACCGGAGGTCTGGACTCTGGAGCAAAGTTACCTGGTTCGTGGTTCGTTTCGGTACGGGGTACGGATTCGGGTTCGCGGTTCGTAGGTAGCTGATTTTAGGTTCGCGAGAGAAGTATGGAATTTTTTTTTGTGTAGTTACATTTTAAAGTACGGAGTGTAATATGCGATAAAAATAATAATAGTATTAAAGTTGATAAGGAAAAATCATTCTGGCTAATTACACAATCCTTAGCAAAGTCACGTGAAAACTAAAAAGGCAGAAGTTAATTGGCCAAAAGAAACTTAATAAAATAATGGGACATCAATAAAACAAAAAGTGCAAAACAAAGTAAAAAAATAAAAACAAAAAGTACAATTCATCATCTTCATCCTTCACCATCGACATCTAGAGTTCCAGTCTCTCCTAAGGTGCTTAGATTCAGCAAGAAGAAAGAACAACAAAAACAACAATTGACGATCGCAATCAACGTGTATGTCCTTCTCAAACAAAAGCCCCAACATATTTTATCATTCTATCGCCTTCCCGGACCTTCAATCGTTAAAAGTAGGGTTTTGGTTTGGTTCGTGAAAAATAGGAATTGGATCGCCAGCGAACCGCGAATTGGTACAGGCGAACCGGTTCGCGGTTCGCGGGGGTTAGGGGCGAACCAGGCAACACTGCTCTGGAGTACTGGTAATATCAGGTCTTTCATTTTGTGCTTCATATGGCCGTATAAGTTATATCAATCAATTTGTTTAAGTTAATCTTGTGCATATTCGTAGGGCCATCCTTACCAGATATCAATATGTAGCATGGGAAACAGAAACGTAGAAATGTAGAAACAGCTTTTCTCTACTTTAAGAGGTTTTAGTTTTATCTCTCTGGGATGTAGAGTATAGAAATTCTGGCTGCTCAATACCTAGCCACCAATCACACATTCCTTTAGCTCTTAATTTGCTGAAGTCTGAAGACATGTCAACAGGATGGTTGCTCAATATTCAGGTTATTGTTACTCCCTTTGTACTTTATTAGGTGATACACTTTCCTTATTTGGCCGTATTTTGATAAGTGATACACTTTCTATTTCTGGCATGTCATTGCCCCCACCTCCAATTATATTAATCTTTCTCTCACTCTTATGGTCCCTCCACTTACTCACATCCTCTTTTTACTACAATAAATAATTCACCCAATATCGATTTCTTACAATAAATAATAACTTACTACCCCAATTCCATCTTATTGTAATAAAATCAACTCACCCTCCTAAAATTCCATGCCGGTCAAAGTGTATCACTGGATAAAATATGGAGGGAGTATTATTTTATTGAGAAAGTGTGATACGTCAAATGAGGCAGCAGCGGTAGGGTCAAGGCTTTCTAGGAATGAGCACTAGTGCCAGGGCTTCTAAGACACGAGGCTTGAGATCTATCAGCATGCTATCTGTCCTTAGGAAGTATGACTTAGAGCACCAGCGATAGCAAGTCACAACATTTGTAGCTTTCTTTGCTATATAAGCTTTCAAATCCATAACTCCCCAAGCTACAATGGTTAGCCACAATCTCACATGTTGCTTAGGTGGGTCCCACATACTCTTTTTCTCAATTTCATTAGTTAGTATGCAGATAACAAATGAAAAAAGTAACAAAATTAGTAGTGGTGGAACCACTTTTATAACTTCAGTCTATTCTTCCAAGCAATTGCATCAGACGGTGAAGTAGTTTGCATGCGTTTGCTTCACTCTCTCCAGTCTCCACCATGTGTTTTTTGCTCCAACTGAAAATTTACAAAGCAACTAGCTCTTGAAAGCCACTTAGCTTTGTAAAGCAACAACCTACAATTACCCACAATGGTCAAGCTTGTTGCTCTAACTTTTAGTATATTGCAAGCAGGTCCGACTGCCTGCTGGCTACCGCTGCTGTTTTTGTTGTATGCTTTTATTTGATAGGACAATAGGGCTATACATTCCATCTCTAGAAAGTACGACATAGATGCTATTACTTAGTAGGACCAGAGGAATGTACAGGGGTCAGGATTGTGAGACAGTTGATTTGAAATTTATGTTGGGTTCATCATACATGAAACTGGATGTTTCCCATATCTGATTTGAAATGATTTTGATAATCAAGCTTCTAGGCCTTTGAAATTTTTATTAGGCCGGTCTGCCGTCTGCTACCCTTATCCAATATGTAATTCATGAGGTATATTTTTTCCTTGTTTTGGGAGTTAAAGAGAAAATGGAAAACATAATAGCTGAGGAAGAGAAGATAAGGGTTGGGGTACTGAAGAACTTAGGTTGTCTGTCTTCTAGCTTATTGCAATTTTGCAACCCTCTATTTAACATTCTAAGGTTACAAGGTCATCAAATTTCTGTGTTTTATGTCGTTGCCTATATCAATTGTCATCAATTGAGGGCTTCCATTTTTATATTCTTACCAGTTTATATATCATCCTACCGATAGAATGATAGCTTCCTTTTGATGGTTAGATGGAGTGCTGGATTCATATTAGCAATCACAAATTCTTATTACAAGTAGTGCACAATAAATATTGTACACCGGAGTAAAAGTTAACTCAAAATACTTAAAAGTTACCTTATATATGTAAAAGTTATCTCTTTGTTAGTTATAAATTTTTTTCATTTTAATAAAAACTATTTCTTCAAAATCACCAATAATGTATAAAATTAATCATTTAATCTTTAAAATCTTTATCTATCAACTTTTGTTTTCTATAATATAATCAAAACATATTAAAAGTTACAAAAAAACTAGGTAAAAGTTATCCTGGTACACCTTGTGCGTGCAAGACCTTTTGATTGGCAATTGACTTTAGAATTACGCTACATTATATTCCGAACCACCATGAAGGCAAAGCTCCTAGTTTCATGTTAGAAGGACTACCTACATAGCTCCTAGTAATAAGAGTTCTTGAAGGTAAAGCTCTTATTGACATGAGACAGTCCATCTTGCCTAAAAAACATCGAAATTTAAGGCTCCATTAATAAAGTTTGGATGAAGAAGCACTGTGGAATATGGATGAAGTAAGCCAATTAGAAGGCTATAGTGATGCCCGAAACAAGTCCATATTCACTCAAAATGAATGTTCCCTCTTATGGCTTCCAGTATTGGGTTTTCTCCAACCTCCTCCCTATCCCATCATACTTTAGATTGATTGTGACAAGAGCAAAAAGGTTGAAACTGTACGGAAACTTTCTAGGTTCGTGTATAAAATGATTGGATTCAGAGAAAAATCTGGATACATAGCTTCTTGTTGACAAGGTAATGCACAAAGGAGACCATTGGATTTATAAGACAAAGTGGAGTTTAGATAGCTTCGCTCATTTATTCACGTGTATGAAGCCAAGCTTGTATGTAAAGGGCAATATCCACAATTTGGGGTTAATTGCAATGAAATGTTACCGCTATTTCGAAGTGGATTATTTAGTGAATTATTCTTGCCTTGTTTGCTCAAGAAGATGGAACTGTTACTAGGATGGAGTTCTTCTTGATGGTTTTCTTGAGATTAATGGTGAATGGAGTATTCTCTTAATCCTTAAAGATCTATAATGATCTTAATGTACTCAAATAAGGTTCTAACTTCTAAGCCATTTAAAGCACAAAAGTATGTGCAAGCAAGGTTACAAGACGGGTCGTGCAAGTCAGTACTTTTGCTTTTCAACAACAGTAAGTTGGATGCCTTTATCTTGTCTTGGTCACATTTTGTTCCTCACATCAATCTATGAATGTTAAGTGTTTGTTTTATGGGAGTAGATGTCTAGGCATGCTCAATAAGTTACGCTTCCAGCCCGTATGGCCTTCTCAATGGTCTAATCTAACTTTTATGTGCCTGTAGCATGTATTCTCTTTGGTAGTTTTAGCTCATCTTTCAGATTCTCCCTTTTCTCTCTGGTATATGTATGGGTATTTTTCATTGTCGCTTTCATCGTTATCACTGTCTCCGTCATCAGAATCATAATGATTTTTGGTAAGGAAAGAAATCTAGGTTAGACCTGAGGAGATAAGTCTAATGGGAAACACTTATAATGGACAAGCAAAATTACGTTGCTAGTGTCAAACACATCCAGGATTGCGAACACTGATGCCCATAATAAGCCATGAAATCGACTGTTTTGTCTGCCTTGCGAATTACCAATCCATTACCAGGGTTAGAAACTTAATATCGTCTTGATTGATTTGATGACAGGGATGTAATCCTCTTCAATGACAAATATTTTTATTATGAACCCATTAAAGCTCCTCCAAGAGCTAGCACTTAAGCCACCAAAATGCTATCTTTTCGTGTTGCTCGGGACCCATCCATGATCACTTTCACATCTTCATATCTACTGTTGTCTTACCATCTTGAAGTTTTGACCCATCGATTTGTTAGCTTAAAGACATTGTGTCGGAAATTTCGTAGAGGTTTGACTTCCCACAATGTCTTGATATCTGCAGAATTCGTGATACGTTTATATCAGTCTCTTCTCTTCTTTGACGGATTTCTGTATTCAAATGTTCAAAAAAAGACCAATCTTTGTAAGCAGGTCTTAGTTAGAATACAATTTTGTTCAAAGGACATTCTCGATATCTAGGATTACGTTGTTTCTTGCATGCCGATTAAGCCTTTTTTTTGGGGTTTTGTTTTGGTTCTGGCTCCTTTGGTTTCAATTTGGAACTTCAGGTATCTTTTTAAGATTTTTACTTTGAGCCATTTTGTACAACCATACAACAAATACGGAGTATCTTATTAATATCTATGGAACACGGAGTAGTTGATAATCAAAGGCTGAACAATGAAGATGTTTTCTTTCATGTTTCGAATACTACCACTCTTATGGTTAAAGAGAAGAAACGAAAAGGATATAAGAATATCTTCCTTTCTGGTTTCGTTTCCTTTTCAAGTGAAATTTAAGCTATTACTGTTATTTTTAAAAATCTTCATCTTTTTCCAGTTTGAGGTTGGGGCTTATTTGGTCATTAAATTGGTTGAGTCAACAGAATGAAAATTGGAGTCTCTCACATGTTCTGGCTGGCAATATAAAATTTTACATTGTTTCTTGCATACCATATAACTACATAAGCCTCTTTTTTTTTTTTTTTTATAACTTTTCTGATTTAGTTCTGCCAGTTTGGTTTCAGTTTGGAACTTTAGGTATCTTATTAAGCTTTTTACTTAGAGCTATTTGGTGCAACCATACAACAACATATGGAGTATCTATGGAGTACAGAGTAGTTGATAATCAAAGACTGAACAAGGTTAAAGAGAAGAAACGAAAAGGATATAAAAATGTTTTCCTTTCAGTTGCCGTTTTCTTTTTTGAAATGAAGTTTAAGCTAATTACTACATATTAATTTTTATTTAAAATCTTCCTCCTTTTCAAGTTTGAGGCTGGGGCTATTTGGTCATTAAATTGGGAGAGTCAACAGAATGAAAGTTGGAATCTCTCACGTGTTCTTGCTGCCAAATTGGATTGACACATTATCCTTAGTATTCTGCTTTACTTGGGTAATTTTTTACTAATGGCAAGTCCCCACATGTTAATCTGTGTATGAGTGCCCATTTATGAAAATTGTACAGAATCACTATTTCTGCAGCATATACATATTTGACGTCTATGTCTTTTGTTTCTTAAAGACTGTTGGTTATAGCACACGTCACTGATGACAGGGTAGCTTTACTCGTCTTCTGGAGGACTTGAGTTCGAGATAGAGTCAAGCTCGATTTGAGTGGATTTTTAACCAAGCTGGTAGCATGGTTTGAGTTTTAAGTTTTAACTAGGTTAATCCCAAGGTAGCTTATGAATAGCCTTATCATCACCCCTATTCTGCCCTTTGTGCTATCTGAATTACCTTTTAGTGCTTGAAAGCAGTAGGCAGTACAGAAGCACTTCATGACTCGCAGGACATTTAATTTCCAATTACATGTTTTAGCTGATAGTGCAATGAGGATCTATGTATGTACAGTTTTATATTTCACTTGCTTGGAACCTTGGTCTTTGAAATGGGAGTAGAGACAGGTGAAGGCATGGTTTAGATGTTTTTCTCCATGTATTTGGTTAGGACTTAGGGCCATGAGTTTTCTGTTTTAGCTAGCATGCATTTAGCCCTACCCTAATGAAATGTAATGGTATATGTTGTTTATCACTCTACAAGATCCCAAATAGAGCGGACTGTCTCTCTCTCTATTTTTTTATTAGGAGAGGTGGTGAATTGAAGAGTACGGAGTATACTATTTTTGGAGAGATTCTAACTTAGTAAAAATGTTTATGAGTACCTCTGTTGCAGTAGAGTGATAGATGTTTGGGTATGTTATTTTTCCGCGAAGCAGGCTCACTGTGGTGCTGATTACTGAAGAGTTAGTGGCTGGCAGCCATGTTACCCGGACTTGGATACCCATATCGGACACAGGTACGTGTCAAGTGTCCGACACGGCTATTTTGTGAAAAAATTGCATGATTTTGGTCCAAATGAATTGTCGAAATGTCCATACCATGTGTCAAGGATGCCACACAGATATTTGAGGTAAAATGAAGAGTCCGGGTAACAGATGCTGGCAGTAGAGTATACATTCCCAATTCCAAATCCGATATATGTTTGTTTCATGATAGTTGTAAACAACTAATTGACAAAAATCTTATATATTCATAAATCACAAGCTTGCTTATGTACAATCATTTTATTCTTCTGTATGTTGACCTGACTGCTCTGCTTGACAACTTCCTGTGCAGATACTAGATACAAACCCGCAGCTGTTTTTCCATCTTCAACAACAAAGAATGATAGAACTAATCAGGAATGGAAAGATAGAAGAGGCTCTGGAATTTGCTCAAGAAGAGCTTGCTCCAAGGGGTGAAGAAAATGTAACACTTTGTTTCCTTACAGCTGCTATATTATCTGCTCATCTATCAAACAATTTGAATGAATTTTTCTTCTTGCTTTGCCATATCCTGTTGATGCTACTCCTAATCCTGAAACTTAGAAGTTCAGGGGTGAAGGGAAGGCAGAGGAGTAATATTTTCCAAGTCCATCCACTGCTTAAGAGAGTCAAACTAGTTGTATTGAGGATGGGTTGTGAAGGGTATGGGATCATTTGTCCGTGTCCTCTGCTAGCCAAAATCCTCTGCTTCATTCCTTGTCTCATCTCCCAACTCTCCTGCCGCTTCCTTTTTCTCCTCTCCCATGTCTCTCTTCTACATCATAGCACCCACTTGCCAAAATCAGCCTCGAATAACTATCCCTAGTTTTTTCGTCTTTCATCATGTCAGATTTGCATCCTCTCTGTTTATATTCAATATAGTCCTTTTTTTTATGGTGCTGATTAAATCAGATGTCTCACAGCAAAGCTTCCTAGAAGAGTTGGAAAGAACGGTTGCACTCCTTGCATTTGAAGACGTCTCTAACTGTCCAGTTGGGGAGCTTTTGGACATATCTCAGCGTTTGAAGACAGCCAGTGAGGTAAATGCAGCCATTCTCACAAGTCAGAGTCATGAAAAAGGTAAACTCAACTTTGTTCGTATCTCTCTGTCTCTGAGTTCACAAATTCGAAATGTTCATTATATTGTGATTGCTTTTCCATTTTTGGTACATTGTGCTTGTTTATTTTACCTATTACATGCAATTGTCTGCACTACCAGATCCCAAGCTACCAAGCTTATTGAAAATGCTGATATGGGCTCAGAATCAACTAGATGAAAAAGCAGCTTATCCTCGAATTAACGATTTAACATCTGCCCACCTAGAAGACCCGGCCGTTTAAAAGTTCTAGCCTCCTCTAGCTTGTATCTCAGATTCAAAGCTTGTAATTTGAAAACTCAGTAGTTAGTCTTTACTCTGAAACATACTGTTAATAGTTAGGACCATTTTTTTTACCATTCTCTTAAAAATCTTTTCAGTGACTTTTGAGCCTTTGCACAGATGTTAATTAATTGATGTCTGTGCTTCTTAAGTTCTTGCTGTTCAATTGGAATTAAAGAGAGTTGGTGATGGGTGATCTATGTGTTTAGTCTCCAATTACTACTTGATTAACAATTGTGTATTGTATTTTTGGCAATTTATAGTTTTCAAATAGGTTTCTTTGATGATTTCGACTTCCATAGGAAGCTCGGTTTCTGGTTGATGACATTCATTCCATGCTTTTGTATTTCGGTTACGACATTCATCCCA

mRNA sequence

ATGTCAATATTTTGGGTTGTTCGTCAGCTTGCACATATCCAGGAATCCATGGCTACGTCGAAAAAGGTTATAACAAAGGAAGAGTGGGAGAAAAAACTTAAAGATGTAAAGATTAGAAAGGAGGATATGAACAAATTAGTGATGAATTTTCTTGTCACCGAGGGTTATGTTGATGCTGCCGAGAAGTTCCGTACGGAGTCTGGAACCGAACATATAGATCTCGCAACGATCATGGATCGAATGGCGGTTAAGAAGGCTGTACAGTGTGGGAATGTGGAGGACGCGATTGAGAAAGTAAATGATTTAAATCCAGAGATACTAGATACAAACCCGCAGCTGTTTTTCCATCTTCAACAACAAAGAATGATAGAACTAATCAGGAATGGAAAGATAGAAGAGGCTCTGGAATTTGCTCAAGAAGAGCTTGCTCCAAGGGGTGAAGAAAATCAAAGCTTCCTAGAAGAGTTGGAAAGAACGGTTGCACTCCTTGCATTTGAAGACGTCTCTAACTGTCCAGTTGGGGAGCTTTTGGACATATCTCAGCGTTTGAAGACAGCCAGTGAGGTAAATGCAGCCATTCTCACAAGTCAGAGTCATGAAAAAGATCCCAAGCTACCAAGCTTATTGAAAATGCTGATATGGGCTCAGAATCAACTAGATGAAAAAGCAGCTTATCCTCGAATTAACGATTTAACATCTGCCCACCTAGAAGACCCGGCCGTTTAAAAGTTCTAGCCTCCTCTAGCTTGTATCTCAGATTCAAAGCTTGTAATTTGAAAACTCAGTAGTTAGTCTTTACTCTGAAACATACTGTTAATAGTTAGGACCATTTTTTTTACCATTCTCTTAAAAATCTTTTCAGTGACTTTTGAGCCTTTGCACAGATGTTAATTAATTGATGTCTGTGCTTCTTAAGTTCTTGCTGTTCAATTGGAATTAAAGAGAGTTGGTGATGGGTGATCTATGTGTTTAGTCTCCAATTACTACTTGATTAACAATTGTGTATTGTATTTTTGGCAATTTATAGTTTTCAAATAGGTTTCTTTGATGATTTCGACTTCCATAGGAAGCTCGGTTTCTGGTTGATGACATTCATTCCATGCTTTTGTATTTCGGTTACGACATTCATCCCA

Coding sequence (CDS)

ATGTCAATATTTTGGGTTGTTCGTCAGCTTGCACATATCCAGGAATCCATGGCTACGTCGAAAAAGGTTATAACAAAGGAAGAGTGGGAGAAAAAACTTAAAGATGTAAAGATTAGAAAGGAGGATATGAACAAATTAGTGATGAATTTTCTTGTCACCGAGGGTTATGTTGATGCTGCCGAGAAGTTCCGTACGGAGTCTGGAACCGAACATATAGATCTCGCAACGATCATGGATCGAATGGCGGTTAAGAAGGCTGTACAGTGTGGGAATGTGGAGGACGCGATTGAGAAAGTAAATGATTTAAATCCAGAGATACTAGATACAAACCCGCAGCTGTTTTTCCATCTTCAACAACAAAGAATGATAGAACTAATCAGGAATGGAAAGATAGAAGAGGCTCTGGAATTTGCTCAAGAAGAGCTTGCTCCAAGGGGTGAAGAAAATCAAAGCTTCCTAGAAGAGTTGGAAAGAACGGTTGCACTCCTTGCATTTGAAGACGTCTCTAACTGTCCAGTTGGGGAGCTTTTGGACATATCTCAGCGTTTGAAGACAGCCAGTGAGGTAAATGCAGCCATTCTCACAAGTCAGAGTCATGAAAAAGATCCCAAGCTACCAAGCTTATTGAAAATGCTGATATGGGCTCAGAATCAACTAGATGAAAAAGCAGCTTATCCTCGAATTAACGATTTAACATCTGCCCACCTAGAAGACCCGGCCGTTTAA

Protein sequence

MSIFWVVRQLAHIQESMATSKKVITKEEWEKKLKDVKIRKEDMNKLVMNFLVTEGYVDAAEKFRTESGTEHIDLATIMDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRMIELIRNGKIEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLDISQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDLTSAHLEDPAV

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo01342	Spo01342	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo01342.1	Spo01342.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01342.1.CDS.6	Spo01342.1.CDS.6	CDS
Spo01342.1.CDS.5	Spo01342.1.CDS.5	CDS
Spo01342.1.CDS.4	Spo01342.1.CDS.4	CDS
Spo01342.1.CDS.3	Spo01342.1.CDS.3	CDS
Spo01342.1.CDS.2	Spo01342.1.CDS.2	CDS
Spo01342.1.CDS.1	Spo01342.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01342.1.utr3p.1	Spo01342.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01342.1.exon.6	Spo01342.1.exon.6	exon
Spo01342.1.exon.5	Spo01342.1.exon.5	exon
Spo01342.1.exon.4	Spo01342.1.exon.4	exon
Spo01342.1.exon.3	Spo01342.1.exon.3	exon
Spo01342.1.exon.2	Spo01342.1.exon.2	exon
Spo01342.1.exon.1	Spo01342.1.exon.1	exon

Homology

[Close]

BLAST of Spo01342.1 vs. NCBI nr
Match: gi|902162499|gb|KNA06689.1| (hypothetical protein SOVF_178690 isoform A [Spinacia oleracea])

HSP 1 Score: 457.6 bits (1176), Expect = 1.300e-125
Identity = 240/242 (99.17%), Postives = 240/242 (99.17%), Query Frame = 1

		  
Query: 1   MSIFWVVRQLAHIQESMATSKKVITKEEWEKKLKDVKIRKEDMNKLVMNFLVTEGYVDAA 60
           MSIFWVVRQLAHIQESMATSKKVITKEEWEKKLKDVKIRKEDMNKLVMNFLVTEGYVDAA
Sbjct: 1   MSIFWVVRQLAHIQESMATSKKVITKEEWEKKLKDVKIRKEDMNKLVMNFLVTEGYVDAA 60

Query: 61  EKFRTESGTE-HIDLATIMDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120
           EKFRTESGTE  IDLATIMDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ
Sbjct: 61  EKFRTESGTEPDIDLATIMDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120

Query: 121 QRMIELIRNGKIEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLDI 180
           QRMIELIRNGKIEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLDI
Sbjct: 121 QRMIELIRNGKIEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLDI 180

Query: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDLTSAHLEDP 240
           SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDLTSAHLEDP
Sbjct: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDLTSAHLEDP 240

Query: 241 AV 242
           AV
Sbjct: 241 AV 242

[Close]

BLAST of Spo01342.1 vs. NCBI nr
Match: gi|645236967|ref|XP_008224990.1| (PREDICTED: glucose-induced degradation protein 8 homolog isoform X2 [Prunus mume])

HSP 1 Score: 429.1 bits (1102), Expect = 5.100e-117
Identity = 225/242 (92.98%), Postives = 233/242 (96.28%), Query Frame = 1

		  
Query: 1   MSIFW-VVRQLAHIQESMATSKKVITKEEWEKKLKDVKIRKEDMNKLVMNFLVTEGYVDA 60
           MS+FW VV QLA I E+MA SKKVIT+EEWEKKLKDVKI+KEDMNKLVMNFLVTEGYVDA
Sbjct: 1   MSLFWIVVHQLAEI-EAMAASKKVITREEWEKKLKDVKIKKEDMNKLVMNFLVTEGYVDA 60

Query: 61  AEKFRTESGTEHIDLATIMDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120
           AEKFR ESGTEHIDLATI DRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ
Sbjct: 61  AEKFRKESGTEHIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120

Query: 121 QRMIELIRNGKIEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLDI 180
           QR+IELIRNGK+EEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLDI
Sbjct: 121 QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLDI 180

Query: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDLTSAHLEDP 240
           SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDL++A LEDP
Sbjct: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDLSTAMLEDP 240

Query: 241 AV 242
            V
Sbjct: 241 TV 241

[Close]

BLAST of Spo01342.1 vs. NCBI nr
Match: gi|1000960672|ref|XP_015576212.1| (PREDICTED: glucose-induced degradation protein 8 homolog isoform X2 [Ricinus communis])

HSP 1 Score: 428.3 bits (1100), Expect = 8.700e-117
Identity = 225/242 (92.98%), Postives = 234/242 (96.69%), Query Frame = 1

		  
Query: 1   MSIFWVV-RQLAHIQESMATSKKVITKEEWEKKLKDVKIRKEDMNKLVMNFLVTEGYVDA 60
           MS+FW+V RQLA I E+MATSKKVIT+EEWEKKL DVKIRKEDMNKLVMNFLVTEGYVDA
Sbjct: 1   MSLFWIVIRQLAEI-EAMATSKKVITREEWEKKLNDVKIRKEDMNKLVMNFLVTEGYVDA 60

Query: 61  AEKFRTESGTEHIDLATIMDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120
           AEKFR ESGTEHIDLATI DRMAVKKAVQ GNVEDAIEKVNDLNPEILDTNPQLFFHLQQ
Sbjct: 61  AEKFRKESGTEHIDLATITDRMAVKKAVQSGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120

Query: 121 QRMIELIRNGKIEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLDI 180
           QR+IELIRNGK+EEALEFAQEELAPRGEENQSFLEELERTVALLAFEDV+NCPVGELLDI
Sbjct: 121 QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVTNCPVGELLDI 180

Query: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDLTSAHLEDP 240
           SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDL++A LEDP
Sbjct: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDLSTAMLEDP 240

Query: 241 AV 242
           AV
Sbjct: 241 AV 241

[Close]

BLAST of Spo01342.1 vs. NCBI nr
Match: gi|985433929|ref|XP_015382539.1| (PREDICTED: glucose-induced degradation protein 8 homolog isoform X2 [Citrus sinensis])

HSP 1 Score: 428.3 bits (1100), Expect = 8.700e-117
Identity = 223/242 (92.15%), Postives = 233/242 (96.28%), Query Frame = 1

		  
Query: 1   MSIFWVV-RQLAHIQESMATSKKVITKEEWEKKLKDVKIRKEDMNKLVMNFLVTEGYVDA 60
           MS+FW+V RQLA I E+MA SKKVIT+EEWEKKL DVKIRKEDMNKLVMNFLVTEGYVDA
Sbjct: 1   MSLFWIVIRQLAEI-EAMAMSKKVITREEWEKKLNDVKIRKEDMNKLVMNFLVTEGYVDA 60

Query: 61  AEKFRTESGTEHIDLATIMDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120
           AEKFR ESGTEHIDLATI DRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ
Sbjct: 61  AEKFRMESGTEHIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120

Query: 121 QRMIELIRNGKIEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLDI 180
           QR+IELIRNGK+EEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVG+LLDI
Sbjct: 121 QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGDLLDI 180

Query: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDLTSAHLEDP 240
           SQRLKTASEVNAAILTSQSHEKDPKLPSLLKML+WAQNQLDEKAAYPRINDL +A LEDP
Sbjct: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLLWAQNQLDEKAAYPRINDLATATLEDP 240

Query: 241 AV 242
           A+
Sbjct: 241 AI 241

[Close]

BLAST of Spo01342.1 vs. NCBI nr
Match: gi|763767606|gb|KJB34821.1| (hypothetical protein B456_006G086200 [Gossypium raimondii])

HSP 1 Score: 427.9 bits (1099), Expect = 1.100e-116
Identity = 222/242 (91.74%), Postives = 233/242 (96.28%), Query Frame = 1

		  
Query: 1   MSIFW-VVRQLAHIQESMATSKKVITKEEWEKKLKDVKIRKEDMNKLVMNFLVTEGYVDA 60
           MS+FW V+RQLA I+E MATSKKVIT+EEWEK+L DVKIRKEDMNKLVMNFLVTEGYV+A
Sbjct: 1   MSLFWFVIRQLAEIEEQMATSKKVITREEWEKRLNDVKIRKEDMNKLVMNFLVTEGYVEA 60

Query: 61  AEKFRTESGTEHIDLATIMDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120
           AEKF+ ESGTEHIDLATI DRMAVKKAVQ GNVEDAIEKVNDLNPEILDTNPQLFFHLQQ
Sbjct: 61  AEKFQMESGTEHIDLATITDRMAVKKAVQSGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120

Query: 121 QRMIELIRNGKIEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLDI 180
           QR+IELIRNGKIEEALEFAQEELAPRGEENQSFLEELERTV+LLAFEDVSNCPVGELLDI
Sbjct: 121 QRLIELIRNGKIEEALEFAQEELAPRGEENQSFLEELERTVSLLAFEDVSNCPVGELLDI 180

Query: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDLTSAHLEDP 240
           SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDL++A LEDP
Sbjct: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDLSNATLEDP 240

Query: 241 AV 242
            V
Sbjct: 241 TV 242

[Close]

BLAST of Spo01342.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QHH8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_178690 PE=4 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 9.400e-126
Identity = 240/242 (99.17%), Postives = 240/242 (99.17%), Query Frame = 1

		  
Query: 1   MSIFWVVRQLAHIQESMATSKKVITKEEWEKKLKDVKIRKEDMNKLVMNFLVTEGYVDAA 60
           MSIFWVVRQLAHIQESMATSKKVITKEEWEKKLKDVKIRKEDMNKLVMNFLVTEGYVDAA
Sbjct: 1   MSIFWVVRQLAHIQESMATSKKVITKEEWEKKLKDVKIRKEDMNKLVMNFLVTEGYVDAA 60

Query: 61  EKFRTESGTE-HIDLATIMDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120
           EKFRTESGTE  IDLATIMDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ
Sbjct: 61  EKFRTESGTEPDIDLATIMDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120

Query: 121 QRMIELIRNGKIEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLDI 180
           QRMIELIRNGKIEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLDI
Sbjct: 121 QRMIELIRNGKIEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLDI 180

Query: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDLTSAHLEDP 240
           SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDLTSAHLEDP
Sbjct: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDLTSAHLEDP 240

Query: 241 AV 242
           AV
Sbjct: 241 AV 242

[Close]

BLAST of Spo01342.1 vs. UniProtKB/TrEMBL
Match: A0A067GKH3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026151mg PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 6.100e-117
Identity = 223/242 (92.15%), Postives = 233/242 (96.28%), Query Frame = 1

		  
Query: 1   MSIFWVV-RQLAHIQESMATSKKVITKEEWEKKLKDVKIRKEDMNKLVMNFLVTEGYVDA 60
           MS+FW+V RQLA I E+MA SKKVIT+EEWEKKL DVKIRKEDMNKLVMNFLVTEGYVDA
Sbjct: 1   MSLFWIVIRQLAEI-EAMAMSKKVITREEWEKKLNDVKIRKEDMNKLVMNFLVTEGYVDA 60

Query: 61  AEKFRTESGTEHIDLATIMDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120
           AEKFR ESGTEHIDLATI DRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ
Sbjct: 61  AEKFRMESGTEHIDLATITDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120

Query: 121 QRMIELIRNGKIEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLDI 180
           QR+IELIRNGK+EEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVG+LLDI
Sbjct: 121 QRLIELIRNGKVEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGDLLDI 180

Query: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDLTSAHLEDP 240
           SQRLKTASEVNAAILTSQSHEKDPKLPSLLKML+WAQNQLDEKAAYPRINDL +A LEDP
Sbjct: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLLWAQNQLDEKAAYPRINDLATATLEDP 240

Query: 241 AV 242
           A+
Sbjct: 241 AI 241

[Close]

BLAST of Spo01342.1 vs. UniProtKB/TrEMBL
Match: A0A0D2RZ86_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G086200 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 7.900e-117
Identity = 222/242 (91.74%), Postives = 233/242 (96.28%), Query Frame = 1

		  
Query: 1   MSIFW-VVRQLAHIQESMATSKKVITKEEWEKKLKDVKIRKEDMNKLVMNFLVTEGYVDA 60
           MS+FW V+RQLA I+E MATSKKVIT+EEWEK+L DVKIRKEDMNKLVMNFLVTEGYV+A
Sbjct: 1   MSLFWFVIRQLAEIEEQMATSKKVITREEWEKRLNDVKIRKEDMNKLVMNFLVTEGYVEA 60

Query: 61  AEKFRTESGTEHIDLATIMDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120
           AEKF+ ESGTEHIDLATI DRMAVKKAVQ GNVEDAIEKVNDLNPEILDTNPQLFFHLQQ
Sbjct: 61  AEKFQMESGTEHIDLATITDRMAVKKAVQSGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120

Query: 121 QRMIELIRNGKIEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLDI 180
           QR+IELIRNGKIEEALEFAQEELAPRGEENQSFLEELERTV+LLAFEDVSNCPVGELLDI
Sbjct: 121 QRLIELIRNGKIEEALEFAQEELAPRGEENQSFLEELERTVSLLAFEDVSNCPVGELLDI 180

Query: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDLTSAHLEDP 240
           SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDL++A LEDP
Sbjct: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDLSNATLEDP 240

Query: 241 AV 242
            V
Sbjct: 241 TV 242

[Close]

BLAST of Spo01342.1 vs. UniProtKB/TrEMBL
Match: A0A0D2VH69_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G024900 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 1.400e-116
Identity = 220/242 (90.91%), Postives = 234/242 (96.69%), Query Frame = 1

		  
Query: 1   MSIFWVV-RQLAHIQESMATSKKVITKEEWEKKLKDVKIRKEDMNKLVMNFLVTEGYVDA 60
           MS+FW+V R+LA I+E MATSKKVIT+EEWEK+L DVKIRKEDMNKLVMNFLVTEGYV+A
Sbjct: 1   MSLFWIVIRRLAEIEERMATSKKVITREEWEKRLNDVKIRKEDMNKLVMNFLVTEGYVEA 60

Query: 61  AEKFRTESGTEHIDLATIMDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120
           AEKFR ESGTEHIDLATI DRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ
Sbjct: 61  AEKFRMESGTEHIDLATISDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQ 120

Query: 121 QRMIELIRNGKIEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLDI 180
           QR+IELIRNGKIEEALEFAQEELAPRGEENQ+FLEELERTV+LLAFEDVSNCP+GELLDI
Sbjct: 121 QRLIELIRNGKIEEALEFAQEELAPRGEENQTFLEELERTVSLLAFEDVSNCPLGELLDI 180

Query: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDLTSAHLEDP 240
           SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRIN+L++A LEDP
Sbjct: 181 SQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINNLSNATLEDP 240

Query: 241 AV 242
            V
Sbjct: 241 TV 242

[Close]

BLAST of Spo01342.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QHH2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_178690 PE=4 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 1.800e-116
Identity = 224/226 (99.12%), Postives = 224/226 (99.12%), Query Frame = 1

		  
Query: 17  MATSKKVITKEEWEKKLKDVKIRKEDMNKLVMNFLVTEGYVDAAEKFRTESGTE-HIDLA 76
           MATSKKVITKEEWEKKLKDVKIRKEDMNKLVMNFLVTEGYVDAAEKFRTESGTE  IDLA
Sbjct: 1   MATSKKVITKEEWEKKLKDVKIRKEDMNKLVMNFLVTEGYVDAAEKFRTESGTEPDIDLA 60

Query: 77  TIMDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRMIELIRNGKIEEAL 136
           TIMDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRMIELIRNGKIEEAL
Sbjct: 61  TIMDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRMIELIRNGKIEEAL 120

Query: 137 EFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLDISQRLKTASEVNAAILT 196
           EFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLDISQRLKTASEVNAAILT
Sbjct: 121 EFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLDISQRLKTASEVNAAILT 180

Query: 197 SQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDLTSAHLEDPAV 242
           SQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDLTSAHLEDPAV
Sbjct: 181 SQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDLTSAHLEDPAV 226

[Close]

BLAST of Spo01342.1 vs. ExPASy Swiss-Prot
Match: GID8_DICDI (Glucose-induced degradation protein 8 homolog OS=Dictyostelium discoideum GN=DDB_G0279265 PE=3 SV=2)

HSP 1 Score: 272.7 bits (696), Expect = 3.800e-72
Identity = 138/223 (61.88%), Postives = 172/223 (77.13%), Query Frame = 1

		  
Query: 16  SMATSKKVITKEEWEKKLKDVKIRKEDMNKLVMNFLVTEGYVDAAEKFRTESGTEH-IDL 75
           S    KKVI+  EW+ KL +V I K D+NKLVMN+LV EGY +AA KF+ ES T+  +DL
Sbjct: 6   SSNAQKKVISTSEWDDKLAEVNISKSDLNKLVMNYLVIEGYQEAAAKFQEESSTQTTVDL 65

Query: 76  ATIMDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRMIELIRNGKIEEA 135
           A+I DRMA++ A+QCG+VE  IE VNDLNPEILDTNPQL+FHLQQQ++IELIR G   EA
Sbjct: 66  ASIADRMAIRSAIQCGDVEKGIEIVNDLNPEILDTNPQLYFHLQQQKLIELIRKGMTAEA 125

Query: 136 LEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLDISQRLKTASEVNAAIL 195
           L+FAQ+ELAP+GEEN  FLEELE+T++LL FED +  P+  LLD SQR KTA E+N+AIL
Sbjct: 126 LKFAQDELAPQGEENNKFLEELEKTISLLVFEDTAKSPLSSLLDHSQRQKTAGELNSAIL 185

Query: 196 TSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDLTSAHLE 238
            SQS +KDPKLP++LK+L WAQ QLD K  YP+I +  +   E
Sbjct: 186 LSQSQDKDPKLPTILKLLKWAQTQLDSKCIYPKITNTVTGEYE 228

[Close]

BLAST of Spo01342.1 vs. ExPASy Swiss-Prot
Match: GID8_CHICK (Glucose-induced degradation protein 8 homolog OS=Gallus gallus GN=GID8 PE=2 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.700e-57
Identity = 114/226 (50.44%), Postives = 165/226 (73.01%), Query Frame = 1

		  
Query: 16  SMATSKKVITKEEWEKKLKDVKIRKEDMNKLVMNFLVTEGYVDAAEKFRTESGTE-HIDL 75
           S A     ITK+EW +KL ++ I++ DMN+L+MN+LVTEG+ +AAEKFR ESG E  +DL
Sbjct: 2   SYAEKPDEITKDEWMEKLNNLHIQRADMNRLIMNYLVTEGFKEAAEKFRMESGIEPSVDL 61

Query: 76  ATIMDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRMIELIRNGKIEEA 135
            T+ +R+ +++ +  G +++AI  +N L+PE+LDTN  L+FHLQQQ +IELIR  + E A
Sbjct: 62  ETLDERIKIREMILKGQIQEAISLINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAA 121

Query: 136 LEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLDISQRLKTASEVNAAIL 195
           LEFAQ +LA +GEE++  L E+ERT+ALLAF++    P G+LL++ QR K  SEVN A+L
Sbjct: 122 LEFAQTQLAEQGEESRECLTEMERTLALLAFDNPEESPFGDLLNMMQRQKVWSEVNQAVL 181

Query: 196 TSQSHEKDPKLPSLLKMLIWAQNQLDE-KAAYPRINDLTSAHLEDP 240
             ++ E  PKL  LLK+L+WAQN+LD+ K  YP++ DL+   +E+P
Sbjct: 182 DYENRESTPKLAKLLKLLLWAQNELDQKKVKYPKMTDLSKGTIEEP 227

[Close]

BLAST of Spo01342.1 vs. ExPASy Swiss-Prot
Match: GID8_BOVIN (Glucose-induced degradation protein 8 homolog OS=Bos taurus GN=GID8 PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 5.900e-57
Identity = 111/218 (50.92%), Postives = 164/218 (75.23%), Query Frame = 1

		  
Query: 24  ITKEEWEKKLKDVKIRKEDMNKLVMNFLVTEGYVDAAEKFRTESGTE-HIDLATIMDRMA 83
           ITK+EW +KL ++ +++ DMN+L+MN+LVTEG+ +AAEKFR ESG E  +DL T+ +R+ 
Sbjct: 10  ITKDEWMEKLNNLHVQRADMNRLIMNYLVTEGFKEAAEKFRMESGIEPSVDLETLDERIK 69

Query: 84  VKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRMIELIRNGKIEEALEFAQEEL 143
           +++ +  G +++AI  +N L+PE+LDTN  L+FHLQQQ +IELIR  + E ALEFAQ +L
Sbjct: 70  IREMILKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQTQL 129

Query: 144 APRGEENQSFLEELERTVALLAFEDVSNCPVGELLDISQRLKTASEVNAAILTSQSHEKD 203
           A +GEE++  L E+ERT+ALLAF++  + P G+LL++ QR K  SEVN A+L  ++ E  
Sbjct: 130 AEQGEESRECLTEMERTLALLAFDNPEDSPFGDLLNMMQRQKVWSEVNQAVLDYENREST 189

Query: 204 PKLPSLLKMLIWAQNQLDE-KAAYPRINDLTSAHLEDP 240
           PKL  LLK+L+WAQN+LD+ K  YP++ DL+   +E+P
Sbjct: 190 PKLAKLLKLLLWAQNELDQKKVKYPKMTDLSKGVIEEP 227

[Close]

BLAST of Spo01342.1 vs. ExPASy Swiss-Prot
Match: GID8_DANRE (Glucose-induced degradation protein 8 homolog OS=Danio rerio GN=gid8 PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 5.900e-57
Identity = 115/218 (52.75%), Postives = 162/218 (74.31%), Query Frame = 1

		  
Query: 24  ITKEEWEKKLKDVKIRKEDMNKLVMNFLVTEGYVDAAEKFRTESGTE-HIDLATIMDRMA 83
           ITKEEW  KL +V I++ DMN+L+MN+LVTEG+ +AAEKFR ESG E ++DL ++ +R+ 
Sbjct: 10  ITKEEWMDKLNNVHIQRADMNRLIMNYLVTEGFKEAAEKFRMESGIEPNVDLDSLDERIK 69

Query: 84  VKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRMIELIRNGKIEEALEFAQEEL 143
           +++ V  G +++AI  +N L+PE+LDTN  L+FHLQQQ +IELIR  + E ALEFAQ +L
Sbjct: 70  IREMVLKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRLRETEAALEFAQSQL 129

Query: 144 APRGEENQSFLEELERTVALLAFEDVSNCPVGELLDISQRLKTASEVNAAILTSQSHEKD 203
           A +GEE++  L E+ERT+ALLAF++    P G+LL++ QR K  SEVN A+L  ++ E  
Sbjct: 130 AEQGEESRECLTEMERTLALLAFDNPEESPFGDLLNMMQRQKVWSEVNQAVLDYENREST 189

Query: 204 PKLPSLLKMLIWAQNQLDE-KAAYPRINDLTSAHLEDP 240
           PKL  LLK+L+WAQN+LD+ K  Y R+ DL+   +EDP
Sbjct: 190 PKLAKLLKLLLWAQNELDQKKVKYSRMTDLSKGTIEDP 227

[Close]

BLAST of Spo01342.1 vs. ExPASy Swiss-Prot
Match: GID8_MOUSE (Glucose-induced degradation protein 8 homolog OS=Mus musculus GN=Gid8 PE=1 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.300e-56
Identity = 113/226 (50.00%), Postives = 163/226 (72.12%), Query Frame = 1

		  
Query: 16  SMATSKKVITKEEWEKKLKDVKIRKEDMNKLVMNFLVTEGYVDAAEKFRTESGTE-HIDL 75
           S A     ITK+EW +KL ++ +++ DMN+L+MN+LVTEG+ +AAEKFR ESG E  +DL
Sbjct: 2   SYAEKPDEITKDEWMEKLNNLHVQRADMNRLIMNYLVTEGFKEAAEKFRMESGIEPSVDL 61

Query: 76  ATIMDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRMIELIRNGKIEEA 135
            T+ +R+ +++ +  G +++AI  +N L+PE+LDTN  L+FHLQQQ +IELIR  + E A
Sbjct: 62  ETLDERIKIREMILKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAA 121

Query: 136 LEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLDISQRLKTASEVNAAIL 195
           LEFAQ +LA +GEE++  L E+ERT+ALLAF+     P G+LL + QR K  SEVN A+L
Sbjct: 122 LEFAQTQLAEQGEESRECLTEMERTLALLAFDSPEESPFGDLLHMMQRQKVWSEVNQAVL 181

Query: 196 TSQSHEKDPKLPSLLKMLIWAQNQLDE-KAAYPRINDLTSAHLEDP 240
             ++ E  PKL  LLK+L+WAQN+LD+ K  YP++ DL+   +E+P
Sbjct: 182 DYENRESTPKLAKLLKLLLWAQNELDQKKVKYPKMTDLSKGVIEEP 227

[Close]

BLAST of Spo01342.1 vs. TAIR (Arabidopsis)
Match: AT1G61150.1 (LisH and RanBPM domains containing protein)

HSP 1 Score: 371.3 bits (952), Expect = 4.500e-103
Identity = 196/242 (80.99%), Postives = 214/242 (88.43%), Query Frame = 1

		  
Query: 1   MSIFWV-VRQLAHIQESMATSKKVITKEEWEKKLKDVKIRKEDMNKLVMNFLVTEGYVDA 60
           MS+F + + QL    E MATSKK+IT+EEWEKKL  VK+RKEDMN LVMNFLVTEGYV+A
Sbjct: 1   MSLFRIFINQLEEDDEDMATSKKMITREEWEKKLNAVKLRKEDMNTLVMNFLVTEGYVEA 60

Query: 61  AEKFRTESGTE-HIDLATIMDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQ 120
           AEKF+ ESGT+  IDLATI DRMAVKKAVQ GNVEDAIEKVNDLNPEILDTNP+LFFHLQ
Sbjct: 61  AEKFQRESGTKPEIDLATITDRMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQ 120

Query: 121 QQRMIELIRNGKIEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLD 180
           QQR+IELIR GK EEALEFAQEELAPRGEENQ+FLEELE+TVALL F+D S CPV ELLD
Sbjct: 121 QQRLIELIRQGKTEEALEFAQEELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLD 180

Query: 181 ISQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDLTSAHLED 240
           +S RLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQ QLDEKA YP INDL++  LED
Sbjct: 181 LSHRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQTQLDEKAVYPHINDLSTGKLED 240

[Close]

BLAST of Spo01342.1 vs. TAIR (Arabidopsis)
Match: AT4G09300.1 (LisH and RanBPM domains containing protein)

HSP 1 Score: 221.1 bits (562), Expect = 7.500e-58
Identity = 126/223 (56.50%), Postives = 157/223 (70.40%), Query Frame = 1

		  
Query: 17  MATSKKVITKEEWEKKLKDVKIRKEDMNKLVMNFLVTEGYVDAAEKFRTESGT-EHIDLA 76
           M T K V+T E+WE KL DV+I  EDMN+LVMN LV EGY +AAEKF+ ES T    DLA
Sbjct: 1   METPKIVVTSEDWESKLSDVEILIEDMNRLVMNLLVAEGYREAAEKFKEESITMPEEDLA 60

Query: 77  TIMDRMAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRMIELIRNGKIEEAL 136
           ++ +R+ V KA++  N+EDAIEK+N LNPEI+ T+    FHL QQ +IELIR  K EEA+
Sbjct: 61  SMNERLEVIKAIESRNLEDAIEKLNALNPEIIKTS----FHLHQQMLIELIREKKTEEAV 120

Query: 137 EFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLDISQRLKTASEVNAAILT 196
            FAQE+LAP  EEN++   ELE+TV +L  E + NCP  EL   SQ ++TAS VN AI T
Sbjct: 121 AFAQEKLAPLAEENEALQRELEKTVCILVTEGLPNCPSRELFHNSQWIRTASHVNEAIHT 180

Query: 197 SQSHEKDPKLPSLLKMLIWAQNQLDEKA--AYPRINDLTSAHL 237
           SQ+ EK P+L  LLK LIW QNQLDEK    YPR+ND ++  L
Sbjct: 181 SQTGEKGPELERLLKELIWTQNQLDEKTVYVYPRMNDFSTGQL 219

[Close]

BLAST of Spo01342.1 vs. TAIR (Arabidopsis)
Match: AT1G11110.1 (LisH and RanBPM domains containing protein)

HSP 1 Score: 220.7 bits (561), Expect = 9.700e-58
Identity = 123/219 (56.16%), Postives = 160/219 (73.06%), Query Frame = 1

		  
Query: 21  KKVITKEEWEKKLKDVKIRKEDMNKLVMNFLVTEGYVDAAEKFRTESGTEHIDLATIMDR 80
           KK+I  + WE+ L   +IRKEDMN+LVMNFLV EGY++A EKF+ ESGT+ + +A+I DR
Sbjct: 53  KKLIMSDVWEQYLTTAEIRKEDMNRLVMNFLVVEGYLEAVEKFQKESGTKQVGVASISDR 112

Query: 81  MAVKKAVQCGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRMIELIRNG-KIEEALEFAQ 140
           +AVK+ ++ G++EDA+EK+N +NPEIL TN    F L QQR IE IR G  I+E   FA+
Sbjct: 113 LAVKRDIESGDLEDAVEKLNAINPEILKTN----FSLNQQRFIERIRIGVTIKETFNFAE 172

Query: 141 EELAPRGEENQSFLEELERTVALLAFEDVSNCPVG--ELLDISQRLKTASEVNAAILTSQ 200
           +EL P  E+N +FLEELE+T+A+L F D+ + P    ELLD S+  KTA+EVNAAILTSQ
Sbjct: 173 KELKPLVEQNLAFLEELEKTMAILRFRDLPDIPEAERELLDNSRWFKTAAEVNAAILTSQ 232

Query: 201 SHEKDPKLPSLLKMLIWAQNQLDEKAAYPRINDLTSAHL 237
           +  K PKL  LLKML W QNQLDEK  YPR++ L +  L
Sbjct: 233 TGLKCPKLLDLLKMLTWTQNQLDEKVEYPRMSVLPTGQL 267

[Close]

BLAST of Spo01342.1 vs. TAIR (Arabidopsis)
Match: AT1G06060.1 (LisH and RanBPM domains containing protein)

HSP 1 Score: 68.2 bits (165), Expect = 8.100e-12
Identity = 52/201 (25.87%), Postives = 95/201 (47.26%), Query Frame = 1

		  
Query: 31  KKLKDVKIRKEDMNKLVMNFLVTEGYVDAAEKFRTESGTEH--IDLATIMDRMAVKKAVQ 90
           ++ +   +   D++ +VM++L+   + + A+   + +G +   ID   +  R  +   + 
Sbjct: 4   RQFEHTVVADNDIHSIVMSYLLHNCFNETADSLASSTGVKQPAIDRDNMERRKQIIHFIL 63

Query: 91  CGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRMIELIRNGKIEEALEFAQEELAPRGEE 150
                 A E    L  ++L+ N  L F L     +ELI  G   EAL+F +  LAP G+ 
Sbjct: 64  ERKALKAFELTEQLAQDLLEKNKDLQFDLLCLHFVELICAGNCTEALKFGKTRLAPFGKV 123

Query: 151 NQSFLEELERTVALLAFEDVSNCPVGELLDISQRLKTASEVNAAILTSQSHEKDPKLPSL 210
            + ++E+LE  +ALLA+ED    P+  LL    R + A  +N  IL   +H     +  +
Sbjct: 124 -KKYVEKLEDVMALLAYEDPEKSPMFHLLSSEYRQQVADNLNRTILEHTNHPSYTPMERI 183

Query: 211 LKMLIWAQNQLDE---KAAYP 227
           ++ +   +  L E   K A+P
Sbjct: 184 IQQVTVVRQYLTEENGKDAFP 203

[Close]

BLAST of Spo01342.1 vs. TAIR (Arabidopsis)
Match: AT1G35470.2 (SPla/RYanodine receptor (SPRY) domain-containing protein)

HSP 1 Score: 65.5 bits (158), Expect = 5.200e-11
Identity = 53/172 (30.81%), Postives = 86/172 (50.00%), Query Frame = 1

		  
Query: 46  LVMNFLVTEGYVDAAEKFRTESGTE----HIDLATIMD----------RMAVKKAVQCGN 105
           LV  +L+  GY +  + F   +       HID    +D          R  +++ V+ G 
Sbjct: 251 LVKTYLLHYGYEETLDAFNLATKNTVPPIHIDQENAIDEDDSSYALKQRKNLRQLVRNGE 310

Query: 106 VEDAIEKVNDLNPEIL-DTNPQLFFHLQQQRMIELIRNGKIEEALEFAQEELAPRGEENQ 165
           ++ A+ ++  L P+I+ D    + F L  Q+ IEL+R GK+EE + + + ELA +     
Sbjct: 311 IDTALAELQKLYPQIVQDDKSVVCFLLHCQKFIELVRVGKLEEGVNYGRLELA-KFVGLT 370

Query: 166 SFLEELERTVALLAFEDVSNCPVGELLDISQRLKTASEVNAAILTSQSHEKD 203
            F + +E   ALLA+E      V   L+ SQR   A  VNAAIL++  ++KD
Sbjct: 371 GFQDIVEDCFALLAYEKPEESSVWYFLEDSQRELVADAVNAAILSTNPNKKD 421

The following BLAST results are available for this feature:

BLAST of Spo01342.1 vs. NCBI nr
BLAST of Spo01342.1 vs. UniProtKB/TrEMBL
BLAST of Spo01342.1 vs. ExPASy Swiss-Prot
BLAST of Spo01342.1 vs. TAIR (Arabidopsis)

BLAST of Spo01342.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902162499\|gb\|KNA06689.1\|	1.3e-125	99.1	hypothetical protein SOVF_1786...	[more]
gi\|645236967\|ref\|XP_008224990.1\|	5.1e-117	92.9	PREDICTED: glucose-induced deg...	[more]
gi\|1000960672\|ref\|XP_015576212.1\|	8.7e-117	92.9	PREDICTED: glucose-induced deg...	[more]
gi\|985433929\|ref\|XP_015382539.1\|	8.7e-117	92.1	PREDICTED: glucose-induced deg...	[more]
gi\|763767606\|gb\|KJB34821.1\|	1.1e-116	91.7	hypothetical protein B456_006G...	[more]

BLAST of Spo01342.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9QHH8_SPIOL	9.4e-126	99.1	Uncharacterized protein OS=Spi...	[more]
A0A067GKH3_CITSI	6.1e-117	92.1	Uncharacterized protein OS=Cit...	[more]
A0A0D2RZ86_GOSRA	7.9e-117	91.7	Uncharacterized protein OS=Gos...	[more]
A0A0D2VH69_GOSRA	1.4e-116	90.9	Uncharacterized protein OS=Gos...	[more]
A0A0K9QHH2_SPIOL	1.8e-116	99.1	Uncharacterized protein OS=Spi...	[more]

BLAST of Spo01342.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
GID8_DICDI	3.8e-72	61.8	Glucose-induced degradation pr...	[more]
GID8_CHICK	2.7e-57	50.4	Glucose-induced degradation pr...	[more]
GID8_BOVIN	5.9e-57	50.9	Glucose-induced degradation pr...	[more]
GID8_DANRE	5.9e-57	52.7	Glucose-induced degradation pr...	[more]
GID8_MOUSE	1.3e-56	50.0	Glucose-induced degradation pr...	[more]

BLAST of Spo01342.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
AT1G61150.1	4.5e-103	80.9	LisH and RanBPM domains contai...	[more]
AT4G09300.1	7.5e-58	56.5	LisH and RanBPM domains contai...	[more]
AT1G11110.1	9.7e-58	56.1	LisH and RanBPM domains contai...	[more]
AT1G06060.1	8.1e-12	25.8	LisH and RanBPM domains contai...	[more]
AT1G35470.2	5.2e-11	30.8	SPla/RYanodine receptor (SPRY)...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006594	LIS1 homology motif	PFAM	PF08513	LisH	coord: 41..67 score: 2.
IPR006594	LIS1 homology motif	SMART	SM00667	Lish	coord: 39..71 score: 4.
IPR006594	LIS1 homology motif	PROFILE	PS50896	LISH	coord: 39..71 score: 11
IPR006595	CTLH, C-terminal LisH motif	SMART	SM00668	ctlh	coord: 76..133 score: 3.1
IPR006595	CTLH, C-terminal LisH motif	PROFILE	PS50897	CTLH	coord: 76..133 score: 14
IPR013144	CRA domain	SMART	SM00757	toby_final6	coord: 129..225 score: 4.9
IPR024964	CTLH/CRA C-terminal to LisH motif domain	PFAM	PF10607	CLTH	coord: 77..219 score: 4.6
None	No IPR available	unknown	Coil	Coil	coord: 26..46 scor
None	No IPR available	PANTHER	PTHR12864	RAN BINDING PROTEIN 9-RELATED	coord: 16..240 score: 6.6E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding