Spo01396.1 (mRNA) | SpinachBase

Overview


Name	Spo01396.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Ypt/Rab-GAP domain of gyp1p superfamily protein
Location	SpoScf_01960 : 46927 .. 55270 (-)
Sequence length	2245

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGCACCTTAAAATTTCGATTGAGGAATCCAATTGGGTCGAGTTAGAAAAAGTTAGGTGTAGTGTTCGAGTGTGAGAATGTGCCTATTTAGGCTGCCCCCGAAAAAGTCATACTCATCGGGGCATTAAGGCATCACCCCACACCACGTGTTCTTTCCTTCCAACACCAACATCAACACCTGCCCGGCTGCCCCCCTTTCTTCTGCAGTTGTACGGTCATCACCTTCTTCTTCTTCTTCTTCTTCTTCGTCTTCCCTCTCTCTTTCTCTCTCCTCACTGTAAACAAACAAAAATGGTGAATGAAAATGAGAAACAGAAGAAGCAGCAAAAGAAGAAAGTTCCAGATTGGTTAAACTCGTCACTCTGGTCTACGCCTTTTCCATCTGCTACCAACCTCACCAAAACCGAAGATCGAACGACTTTCTCTGATGATGGACTCATTACACGAACAACTGATCGTCCGACTTCTTCTGATGGAGTTGTCATCACCCGTCCTCCGTCTCCAGTACGACCACCACCTCCACCTCCTCCGCCTTCGTCTCCGCCTTTTCAGTCGTCGGATTCCAATGGCACTTCCACTTCCTCTGCCTCTCCTTCCCCCGAGGAGATCGCTCGCCAAGCTCAGCTCTTAGTCGAGGTTTCTCTTCTTCTTTTTTTTCAATTAATTTCCCAATTATTAAACCTGTCTTAACCCTAATTTTAATTCCTTTTTCAATTTGGTAAAAGCTGTCGAAGAAGGTGATTAATATGAGAGAAATCAGGAGGCTAGCATCCATGGGTCTTCCTGATGCTCCTGTCATCCGTTCTACTGTCTGGAAGGTTTCAATTTCTCTCTATTTCCAATAAATTTATAGGAATTGATTAATTGAATAAGATTAATAACAGTGAATGAAATTGCAATTGGCAGCTTCTATTGGCATATTTACCCAGTGATCGAGCAATGTGGCCGTCTGAATTAGCCAAGAAGAGGTCCCAATACAAGCATTTCAAGGATGACCTCTTAATGTCTCCCGTATGTCCACTCTTCTGAATTTCTTTTGTTTCCGCTCTGAATTCGCTTCACTGTTTTTTCACCACTCATGCATACTCATGGACTACTATTCTAAACTGCTCAACTTTCCATATCATATAGCTTATGTATGTTAATTCTGGTTCAAACACTATGATGGGTGTCAATGTTGGTTGAAACACTGTGATGTCAATGTAAACATATTGTTACTTTCATTTGTATGAAGTTCAGTATTTCTGAATGTCTATGTGGCTAGTCAGTCAGAAATTTCGAGGAAGCTGGAGAAGTCGTCGCTTGCTGATAAGGATGAGCTGAAAGGTGAAAGTCGTTGCGTACTCTCTAGATCAGAAATTGTTCAAGATGAGCATCCTCTTAGCCTTGGGCAATCCAGTCTATGGAATCAGTTTTTTCAGGTAAATACCCTTACTGTCAACTATAATATCAGTTGTTCTCAAGGTGATTACGGACTTCTAATTAAAATATTAAGCATTTTACTTTGTACAATTCATATTGCTTTCCCCCGCCCCCCTTTCATTCCCTTGGGTGTGTGTGTGTGGGGGGTTCGTATGTTTTATTGGAAAATAAATCAATTTGCGTTCAAAATTATTCTTTCCTTACATATAGTCTTCTTCTTGTTCTTCGAAAGACCATATAGTCTGGTTCTGAACAAGATGGGTGCTTGGATGTGTTGTGAACCTTGTAACTAATTTACGATATCTTTGCTTTGGTACTGAACAGTTTGTCTTCTTAGCGTATTGGCTGCTGTCGTGAACTAACCAGTATTGGATGTTTTTTCTATGTAAATGTTTATCTGGGGGTGGGGTAGTCTGACATTACCGACTAAGACAGTCGACGTCTGCATTGAGTACTTGTGGTTCTCTTTTCTGGAGACAATGTAGGAGGATATTTTCATTTTAGTTAATCTTTATTCTGGCTCAACTACTTGCTCATTTGACTAAATTGGTCTCATCTTATGTCTGTCTTGAGAATTTGGAGTGTATCTTAGTAGTTCCTTCTACTCAAAGCAATTTTCTTTTAAATAATTGCATTTGCAAGATAAAATTACTGATGGTCCTTATGTGTACTTAGGACACAGAGATCATCGAGCAGATTGATCGGGATGTGAAAAGAACTCACCCAGATATGCACTTTTTCTCTGGGGATACGGTTTCTGCAAAATTAAATCAAGTCAGTTATGTTTTCTTTGTATTTAATTTATGGCATTGTTAAATCTCATCTAACTAAGAAAATGACACTTTTCATGCTGTAGGACGCACTGAGGAACATTTTGATCGTATTTGCTAAGCTAAACCCTGGCATAAGATATGTACAAGGAATGAATGAGTTATTGGCACCTCTCTTCTATGTTTTTCGAAATGATCCAGATGATGAAAACTCCGTAAGTACTACAATGCACTTCTTGCCTTTTCAATGGACTAACATAAATTAAAAATATACATGTCTGTTTGTGTGTTTATATTTTTATTCTATGAATTCTATATGCACTAATATATCTTAATAGGCTTCCACGTTATCCTTCTGTACCTGGGAAATATGAGACCTAGGATGGTTGAACATGGATCTGACCCATTTACCTTGTATGTACATTTACTTCGTCATCGCTTAGACCTATGTCTGACGTAGTTCAAGTACAAAGACACCTGGCAGTATTTCACAATATCAGTGGAATGATTGTTCTATGTTTGCAACGTTTCTTCCTGTGAAAAAAATAATTCTTTCTTTAGCCGTCACACTCATTATTGATTATTCCACTATTCAAAAGCCTTCTCATTGATTGTCAAGTCCGCTTTCTATTCAAAGCCTTCTCGTTAGCACTCAAGTTAGCCTAGTTATAAAAGCAAAAGCGTTCTTGAAGCACACCTAGCTGCTAGGCACAGGTCTGTTTGATTCAATCAGATGCCTTGGGAGTGTCTTCACCAAGATGAGGTGCATTGTGCCGTGGTCTTGGTCACCTATATGCTTTGATGCTTTGGGAAGCTCTTTCTAGAAATCAGAAAATTGAAAAATAATGTCATATTCACTCCACATTACATGCTGAAGGGTTAAGTCTACAACCCCCTCCCCCCCCCAACACTTACACACATCTCGTCTTATCTCCTTCTGATTTGAGAAGTTGAACAAACCATAAAATATACATCCATTAAAGAAGTTTCAACTTTGTCCTTCTTTGACTTCCTTAAACAGTAGCAGTGACCAGCCAATACATCAGCTGTCTCTGTCTTCTCCCCTAGTATGTTTTTCTCCTCCCTCAACTTGCTTTCGTTTTCCTTTCCTCACTCTTCTTTTGTCTTCTTCAAATGTTTACTTTCAATCTCTTTCTTTTAGGACGTTTTGACCTCCTTCTCTGTCTTCTCTCTTTGTTTTCTTCAGTAATTCTAAGACCCTCTGTTCTTTATTTCTCTTTCCTTCATCCTTCTTTCTTAAGAATGTTCACTTATCATTTTTGGTGTGCGACAGTGGTGTTGATTTCCTTAACATCTATTGGTCAGTGATTTTCACCGGTATTGCACAGGTTGTAACAAAAATAACTTGCATTTGGAATGTTTTATGTCACTGAAGGATTAGAGAATGATCCTTTGCTATTCTCCTTCCCTCTTTTTGACTGTGTTGTAGTTTAATTTCTTTTGAAATTCTACTTTTATCTTCAACAGATATGGACATAGTGTTATAGGTTGTTAATCTTATTTTGTGGAGTACTAGATGTATGGTTACCATGTATATAATATGTTGGTCTTCAAGCTTTTATAAAATACTCCCTCCGTCCCGGAATACTCGACCCGGTTTGACCGGCACAGAGTTTAAGGGACTTGAATCGACTTATTTAATTTAATAGGTAGTAGTTGATAGTGGGGTGTTATTTTAATGTAGTTAGTGGGAGGTGGGTTAAGAGGTGGGGTTGGGGAGAGTAGGGGTTGAATTTTTAATTATTTTTTGTATGGAGTAGGGGGTAGGTGGGTTAATAGGGGTGGAGTGAGAAATAATATAATATTGTTAGAATATTTTCATTTTTAGAAACAGGTCAAGTATTAAGGGACGGCCCAATAAGGAAATCACGTCAAGTATTCCGGGACGGAGGGAGTAGCACTAAAGCGTTTTTTGATGCAAACTCTAGGGTGGAAATGACTTAAACGCTGTTTTGCAAAAAGTGTCCTCCGTCGACTGATGAGCACACTTTTTCATAGGACCCTTAGCGTCTTGCATTTTAAATTAAGTGTGCTGGTGAGGATTTGCATCTTTTCATCTGGCTGCAAGGGAATCCAACACATGCTTTTTTTTAAAAGTTGTGTCAAATCGCCCTCTGTGCATTGTTAATTCTTGCCTTTTAGAGACCGGAGTGAGCCACATGGTCCAACCTTAAAGATATGCACTGTGCCACTACTAGGCTATCTTAAGTTTGCATATTTTTTCCCTTGCGAACAACCTGAGTAATGTCAAATATATGACCACTTGTCACTTTGTCATGTTATCGCAACACCATTTAGCCATATGTCCCAACGCCACTAAATTTTGAATGAAAAGTGGCATTGCAACAGAAATGTTTATAACGGTACCATCTTAAATCTTTTGCTTACTCTTTTCTTCCATGTCTTAAAAATGACTTAGGCCCTTTATCATCCCTTTTTCCAAACTTCTATAATAGAGAGCATACTTTTGGTGAATTTGATGAAGAATTTCTGCTTCCATCGCTTACCTATGTCAACACACTTGATGAACTATCACTATATAATCAAGTTGGTCGAAATTCAAGTTCAATTAAGGGATAGAAACTTTTTTTGGTAACCAGGGAAACTTTGAGTAGTAACCAGGCCCTTTATCATTCTTTATTTTGGCTTAAGGCAACTTTGCAGTAGTCAGTCACCTCCGTTCATTTGGTCGAACTTTGGGTGTCGAAATGTGATCTATTGAAGTGCTGGAGGCTCAGACATGGATACTCTTTTATGATATTTATAAGCTTCCAAGACTTCCAACTTACAAGACATTCACTAGCAGGTTCAAGTTGTCCGAAGTTGGTGCACGTGCACCCACGTGAGTAATTATGAAAGTAAAATAACTCATTTTATCTTCCACTAATTGCAAGTAGCCTAGTCCGTATATTTTTTTTCTGCTTGACAATCAAAACATCCCCATTTTCACTGTCTTTTTCAGACTTTTTTGAAAAAGAAATATGGTGCACTATGCTTGGAAAATTTTGGATTGTTTACTTCTGAAAATTTGGTAAATTGTAATAGTTGCTTGTACTTTTTGTCTGCGAACATTAAAGATGTACATCATAATTAATTATTTTTGACTCTGAATGAGTTTCTCTTTCCCCTGCAGGCTGCTGCTGAAGCAGATACATTCTTTTGTTTTGTTGAGTTGCTTAGTGGGCTCAGGGATAATTTCTGTCAGCAACTTGATAACAGTGTTGTTGGAATTCGTTCCACAATCACCAAATTGTCACTACTTTTAAAGGAACACGACGAAGAACTTTGGCGTCATTTGGAGATCACGTGTAAGGTAATATATATTTTGTTTGTGTTATATATTCTGCTCCTAATCTGCCTATATTTTTCTTACTTTGCCATCTGGCCCACCTTTAGTTGTATCGTTCTTGTCATTTATTATCTTATGCTAAAATGGAGCTTTAATCTGAACCAGATACCGGCAGTTATCCAGGTTGCAGATTGTGAATCTTTTTTTGTTGCTTAGCGTAGTTAATATTTAAAACTCAGGATTTTAAAGATGCACCATACATGCACATGACTTACATGGACACCATCTGAGTTGGGGTAGCCACAGTGAATTTTTAGGTTGGGTGTTTGTGGTGTTGCAGTGGATTTTCATTACGTTCAATTGTGAGCAAAAACTGCACTAATATGCTGAACATGGATAATGGAAGTAGTGGCACATTTGGGGGGATGGGAATGGGGTTGAAGGTTTCTTTCTCAGGAGCAAATAGGAGTTGGGTACTGGGGTTTGAGGTTAGAGGCTTACAGTGGAAATAAAATGTCTCTCATTCCCATGTTCTTGTACCTTGGGAATGACTGCCTGTTTTCTCTGTTGCTGGCTATTGGTTTAACGCCACCTAACAGCCTGATAAACGAACAAGTGATCGACAACAGCCACTGACATGTTGGCAGATACATTTTTATAAAAAAATGAAGGAATAATTTCACTGTAAAACAGGAACGTACTATTTAGAATCTGGAAAACTAACTGAAACCTCGACACTACTGCCAGTATTGAATGAAAAGAGTTAGCTGCTCTTTTGTTATATTTTTTTATTTTATTAAAGCCGCATGCTTGTTTGAAGCCTGTAGCCTGTTGAGAGGGACTGGCCAAAGTCTTTAAGGGGTCATCCAAGTGTGCTTGATCACTTACCAAATCAATGAATTTGGATTCTTAGTTTGCACTTTCCCATTGCTCCCCATCCAACTTCTTTTCATACCTCTTTCATGATCACCTAAAACGAGACAGCTGATTAGGGCCATATTTCACGATCTTCTTTATGGCTGCTTCATAACTCAATTTTTTAAAACAAATCATACTCGTTTTCTGTCATCTCTTACATTTGTGTAATGCTAAAATACCATCATAGAATACCTCAACCTTCTGCCTCTAATGAGGCTGATCGCTGACGCCTACAGTTTCAGTTGAATTGCACAGAGCATATGCCAGTCCTTTAGATGGAAAAGCATGTGATGTGAATTCGACATGAAAGTTTGTTGTACACCTAACTGAATGCTAAACTGCCTGCTCTTTTGGTGACAGGTTAATCCCCAGTTTTATGCATTCAGATGGATAACTCTTCTCTTGACTCAAGAATTCAGCTTCACAGACAGCCTCCATATTTGGGACATTCTATTAAGTGATCCTGAGGGGCCACAGGTGTGTTTAAGTTCTCTAATCATCTAAATTTTACTTGTTTGTTGTGGAGCGAAGGATTGGGATTGGTTTTTTTTTACTTGTTGACAGCACAAATATAGGCATCACCGCGTCACATTTTTTGCTATTGTTTACTGCTATGCTGCCCTTGCTTCAAATAATACTAGTTATGTATACACTATATTGTCCTGAAGTAGAGTAATCATAAACAGCTGTAACTTTGGGATAAGAAACCCATTAGTTACCAAAACAATTTTGTTTAGTCCGAGTGCAACTGTGCTTGAAGCTAACTAAGTTAGAAATAGCAGAAAGATTTGGAGTCGGGAGATTGTGTGGTTCAATAATGTAATAAAACATGTAGAGAGTATGTACTAGTCTTTATGCAAGTTTTAGTTACTGTTGGACTGCAAATGCTTACAGTTACTATGTTGTCCTATTATGCGAGCACTTGTCTGTCAGCAAAAGCCCTTATTCTGGCTATATACTTTTGGATAATGTGGGCATTGGGTGGGGGTGTAAGAAGTATATTGTTTGTCTACTATGTTAAATATTCATACTGTGGCATTGAGATTATTCCGGTATTACCTGCTTAGATGATATTTGAATGGAATAGATACGACCTTCTTTGACTTGTCAAGTAATCTTAAGAGGAAATTTTAACATGATGACATCTTATCAAAACTAATATTGGCTGGTATGGCTTGACAACATTTGCAGGAAACATTGCTAAGGGTATGTTGTGCAATGCTTATTCTTATCCGAAGACGGTTGCTTGCTGGTGATTTTACTTCCAATCTCAAGCTTTTACAAAACTACCCCTCAACAAATATTAGTCACCTGCTATATGTTGCAAACAAGTTAAGGGCTCATCCAACTAGCTAGGTTCTATGTATGACATCTTCAGTTCCTTGTGATTCTTTTCTTTGTTTTATTTTTCATACTTCTGCACATTGTAGAATACGGAGTACTTTTTTTTTGTATGCTTATTTTATTTTTCTTTTATTATGTAAATGTCTGTTTAAATTGCATTGGTTGAACACCCCCATGTTTATTGTCAATACTGTCTTGTGGTTTGTACCTTGAATGCAGCGATGCTGACAATGCCCGTCAAATTGAGGTTTGGCCACCGTACGGTAGCCAATACAACGTCTGTCCTAGTAAATAGTACGGATTAATGTATGATCTGCTTTAAAGCAGCTTTTTAATTTATCTATTTTGGGCTAATTTAAAATCTGCTCTACAGTTAAAGTTGTAATTCGTCTTGGTAAATTTTTTGGTGTCCAGTTAAAGTTAAAATTCGCTTTGGTTTATTTTTCGGCGTCCCAAAAGAAATGTCACCCAATTTTTTTACTGAAATGATATATTATTTGACGAATTTCTTGTAGACAAATCTGTAAACCTCTGTTACACCATCTTTAATGAGGGCTCAAGTAGCCTAATTAATTAGAT

mRNA sequence

GTTGCACCTTAAAATTTCGATTGAGGAATCCAATTGGGTCGAGTTAGAAAAAGTTAGGTGTAGTGTTCGAGTGTGAGAATGTGCCTATTTAGGCTGCCCCCGAAAAAGTCATACTCATCGGGGCATTAAGGCATCACCCCACACCACGTGTTCTTTCCTTCCAACACCAACATCAACACCTGCCCGGCTGCCCCCCTTTCTTCTGCAGTTGTACGGTCATCACCTTCTTCTTCTTCTTCTTCTTCTTCGTCTTCCCTCTCTCTTTCTCTCTCCTCACTGTAAACAAACAAAAATGGTGAATGAAAATGAGAAACAGAAGAAGCAGCAAAAGAAGAAAGTTCCAGATTGGTTAAACTCGTCACTCTGGTCTACGCCTTTTCCATCTGCTACCAACCTCACCAAAACCGAAGATCGAACGACTTTCTCTGATGATGGACTCATTACACGAACAACTGATCGTCCGACTTCTTCTGATGGAGTTGTCATCACCCGTCCTCCGTCTCCAGTACGACCACCACCTCCACCTCCTCCGCCTTCGTCTCCGCCTTTTCAGTCGTCGGATTCCAATGGCACTTCCACTTCCTCTGCCTCTCCTTCCCCCGAGGAGATCGCTCGCCAAGCTCAGCTCTTAGTCGAGCTGTCGAAGAAGGTGATTAATATGAGAGAAATCAGGAGGCTAGCATCCATGGGTCTTCCTGATGCTCCTGTCATCCGTTCTACTGTCTGGAAGCTTCTATTGGCATATTTACCCAGTGATCGAGCAATGTGGCCGTCTGAATTAGCCAAGAAGAGGTCCCAATACAAGCATTTCAAGGATGACCTCTTAATGTCTCCCTCAGAAATTTCGAGGAAGCTGGAGAAGTCGTCGCTTGCTGATAAGGATGAGCTGAAAGGTGAAAGTCGTTGCGTACTCTCTAGATCAGAAATTGTTCAAGATGAGCATCCTCTTAGCCTTGGGCAATCCAGTCTATGGAATCAGTTTTTTCAGGACACAGAGATCATCGAGCAGATTGATCGGGATGTGAAAAGAACTCACCCAGATATGCACTTTTTCTCTGGGGATACGGTTTCTGCAAAATTAAATCAAGACGCACTGAGGAACATTTTGATCGTATTTGCTAAGCTAAACCCTGGCATAAGATATGTACAAGGAATGAATGAGTTATTGGCACCTCTCTTCTATGTTTTTCGAAATGATCCAGATGATGAAAACTCCGCTGCTGCTGAAGCAGATACATTCTTTTGTTTTGTTGAGTTGCTTAGTGGGCTCAGGGATAATTTCTGTCAGCAACTTGATAACAGTGTTGTTGGAATTCGTTCCACAATCACCAAATTGTCACTACTTTTAAAGGAACACGACGAAGAACTTTGGCGTCATTTGGAGATCACGTGTAAGGTTAATCCCCAGTTTTATGCATTCAGATGGATAACTCTTCTCTTGACTCAAGAATTCAGCTTCACAGACAGCCTCCATATTTGGGACATTCTATTAAGTGATCCTGAGGGGCCACAGGAAACATTGCTAAGGGTATGTTGTGCAATGCTTATTCTTATCCGAAGACGGTTGCTTGCTGGTGATTTTACTTCCAATCTCAAGCTTTTACAAAACTACCCCTCAACAAATATTAGTCACCTGCTATATGTTGCAAACAAGTTAAGGGCTCATCCAACTAGCTAGGTTCTATGTATGACATCTTCAGTTCCTTGTGATTCTTTTCTTTGTTTTATTTTTCATACTTCTGCACATTGTAGAATACGGAGTACTTTTTTTTTGTATGCTTATTTTATTTTTCTTTTATTATGTAAATGTCTGTTTAAATTGCATTGGTTGAACACCCCCATGTTTATTGTCAATACTGTCTTGTGGTTTGTACCTTGAATGCAGCGATGCTGACAATGCCCGTCAAATTGAGGTTTGGCCACCGTACGGTAGCCAATACAACGTCTGTCCTAGTAAATAGTACGGATTAATGTATGATCTGCTTTAAAGCAGCTTTTTAATTTATCTATTTTGGGCTAATTTAAAATCTGCTCTACAGTTAAAGTTGTAATTCGTCTTGGTAAATTTTTTGGTGTCCAGTTAAAGTTAAAATTCGCTTTGGTTTATTTTTCGGCGTCCCAAAAGAAATGTCACCCAATTTTTTTACTGAAATGATATATTATTTGACGAATTTCTTGTAGACAAATCTGTAAACCTCTGTTACACCATCTTTAATGAGGGCTCAAGTAGCCTAATTAATTAGAT

Coding sequence (CDS)

ATGGTGAATGAAAATGAGAAACAGAAGAAGCAGCAAAAGAAGAAAGTTCCAGATTGGTTAAACTCGTCACTCTGGTCTACGCCTTTTCCATCTGCTACCAACCTCACCAAAACCGAAGATCGAACGACTTTCTCTGATGATGGACTCATTACACGAACAACTGATCGTCCGACTTCTTCTGATGGAGTTGTCATCACCCGTCCTCCGTCTCCAGTACGACCACCACCTCCACCTCCTCCGCCTTCGTCTCCGCCTTTTCAGTCGTCGGATTCCAATGGCACTTCCACTTCCTCTGCCTCTCCTTCCCCCGAGGAGATCGCTCGCCAAGCTCAGCTCTTAGTCGAGCTGTCGAAGAAGGTGATTAATATGAGAGAAATCAGGAGGCTAGCATCCATGGGTCTTCCTGATGCTCCTGTCATCCGTTCTACTGTCTGGAAGCTTCTATTGGCATATTTACCCAGTGATCGAGCAATGTGGCCGTCTGAATTAGCCAAGAAGAGGTCCCAATACAAGCATTTCAAGGATGACCTCTTAATGTCTCCCTCAGAAATTTCGAGGAAGCTGGAGAAGTCGTCGCTTGCTGATAAGGATGAGCTGAAAGGTGAAAGTCGTTGCGTACTCTCTAGATCAGAAATTGTTCAAGATGAGCATCCTCTTAGCCTTGGGCAATCCAGTCTATGGAATCAGTTTTTTCAGGACACAGAGATCATCGAGCAGATTGATCGGGATGTGAAAAGAACTCACCCAGATATGCACTTTTTCTCTGGGGATACGGTTTCTGCAAAATTAAATCAAGACGCACTGAGGAACATTTTGATCGTATTTGCTAAGCTAAACCCTGGCATAAGATATGTACAAGGAATGAATGAGTTATTGGCACCTCTCTTCTATGTTTTTCGAAATGATCCAGATGATGAAAACTCCGCTGCTGCTGAAGCAGATACATTCTTTTGTTTTGTTGAGTTGCTTAGTGGGCTCAGGGATAATTTCTGTCAGCAACTTGATAACAGTGTTGTTGGAATTCGTTCCACAATCACCAAATTGTCACTACTTTTAAAGGAACACGACGAAGAACTTTGGCGTCATTTGGAGATCACGTGTAAGGTTAATCCCCAGTTTTATGCATTCAGATGGATAACTCTTCTCTTGACTCAAGAATTCAGCTTCACAGACAGCCTCCATATTTGGGACATTCTATTAAGTGATCCTGAGGGGCCACAGGAAACATTGCTAAGGGTATGTTGTGCAATGCTTATTCTTATCCGAAGACGGTTGCTTGCTGGTGATTTTACTTCCAATCTCAAGCTTTTACAAAACTACCCCTCAACAAATATTAGTCACCTGCTATATGTTGCAAACAAGTTAAGGGCTCATCCAACTAGCTAG

Protein sequence

MVNENEKQKKQQKKKVPDWLNSSLWSTPFPSATNLTKTEDRTTFSDDGLITRTTDRPTSSDGVVITRPPSPVRPPPPPPPPSSPPFQSSDSNGTSTSSASPSPEEIARQAQLLVELSKKVINMREIRRLASMGLPDAPVIRSTVWKLLLAYLPSDRAMWPSELAKKRSQYKHFKDDLLMSPSEISRKLEKSSLADKDELKGESRCVLSRSEIVQDEHPLSLGQSSLWNQFFQDTEIIEQIDRDVKRTHPDMHFFSGDTVSAKLNQDALRNILIVFAKLNPGIRYVQGMNELLAPLFYVFRNDPDDENSAAAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEELWRHLEITCKVNPQFYAFRWITLLLTQEFSFTDSLHIWDILLSDPEGPQETLLRVCCAMLILIRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRAHPTS

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo01396	Spo01396	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo01396.1	Spo01396.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01396.1.utr5p.1	Spo01396.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01396.1.CDS.9	Spo01396.1.CDS.9	CDS
Spo01396.1.CDS.8	Spo01396.1.CDS.8	CDS
Spo01396.1.CDS.7	Spo01396.1.CDS.7	CDS
Spo01396.1.CDS.6	Spo01396.1.CDS.6	CDS
Spo01396.1.CDS.5	Spo01396.1.CDS.5	CDS
Spo01396.1.CDS.4	Spo01396.1.CDS.4	CDS
Spo01396.1.CDS.3	Spo01396.1.CDS.3	CDS
Spo01396.1.CDS.2	Spo01396.1.CDS.2	CDS
Spo01396.1.CDS.1	Spo01396.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01396.1.utr3p.1	Spo01396.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01396.1.exon.9	Spo01396.1.exon.9	exon
Spo01396.1.exon.8	Spo01396.1.exon.8	exon
Spo01396.1.exon.7	Spo01396.1.exon.7	exon
Spo01396.1.exon.6	Spo01396.1.exon.6	exon
Spo01396.1.exon.5	Spo01396.1.exon.5	exon
Spo01396.1.exon.4	Spo01396.1.exon.4	exon
Spo01396.1.exon.3	Spo01396.1.exon.3	exon
Spo01396.1.exon.2	Spo01396.1.exon.2	exon
Spo01396.1.exon.1	Spo01396.1.exon.1	exon

Homology

[Close]

BLAST of Spo01396.1 vs. NCBI nr
Match: gi|902230762|gb|KNA21984.1| (hypothetical protein SOVF_038300 [Spinacia oleracea])

HSP 1 Score: 902.1 bits (2330), Expect = 3.900e-259
Identity = 461/461 (100.00%), Postives = 461/461 (100.00%), Query Frame = 1

		  
Query: 1   MVNENEKQKKQQKKKVPDWLNSSLWSTPFPSATNLTKTEDRTTFSDDGLITRTTDRPTSS 60
           MVNENEKQKKQQKKKVPDWLNSSLWSTPFPSATNLTKTEDRTTFSDDGLITRTTDRPTSS
Sbjct: 1   MVNENEKQKKQQKKKVPDWLNSSLWSTPFPSATNLTKTEDRTTFSDDGLITRTTDRPTSS 60

Query: 61  DGVVITRPPSPVRPPPPPPPPSSPPFQSSDSNGTSTSSASPSPEEIARQAQLLVELSKKV 120
           DGVVITRPPSPVRPPPPPPPPSSPPFQSSDSNGTSTSSASPSPEEIARQAQLLVELSKKV
Sbjct: 61  DGVVITRPPSPVRPPPPPPPPSSPPFQSSDSNGTSTSSASPSPEEIARQAQLLVELSKKV 120

Query: 121 INMREIRRLASMGLPDAPVIRSTVWKLLLAYLPSDRAMWPSELAKKRSQYKHFKDDLLMS 180
           INMREIRRLASMGLPDAPVIRSTVWKLLLAYLPSDRAMWPSELAKKRSQYKHFKDDLLMS
Sbjct: 121 INMREIRRLASMGLPDAPVIRSTVWKLLLAYLPSDRAMWPSELAKKRSQYKHFKDDLLMS 180

Query: 181 PSEISRKLEKSSLADKDELKGESRCVLSRSEIVQDEHPLSLGQSSLWNQFFQDTEIIEQI 240
           PSEISRKLEKSSLADKDELKGESRCVLSRSEIVQDEHPLSLGQSSLWNQFFQDTEIIEQI
Sbjct: 181 PSEISRKLEKSSLADKDELKGESRCVLSRSEIVQDEHPLSLGQSSLWNQFFQDTEIIEQI 240

Query: 241 DRDVKRTHPDMHFFSGDTVSAKLNQDALRNILIVFAKLNPGIRYVQGMNELLAPLFYVFR 300
           DRDVKRTHPDMHFFSGDTVSAKLNQDALRNILIVFAKLNPGIRYVQGMNELLAPLFYVFR
Sbjct: 241 DRDVKRTHPDMHFFSGDTVSAKLNQDALRNILIVFAKLNPGIRYVQGMNELLAPLFYVFR 300

Query: 301 NDPDDENSAAAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEELW 360
           NDPDDENSAAAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEELW
Sbjct: 301 NDPDDENSAAAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEELW 360

Query: 361 RHLEITCKVNPQFYAFRWITLLLTQEFSFTDSLHIWDILLSDPEGPQETLLRVCCAMLIL 420
           RHLEITCKVNPQFYAFRWITLLLTQEFSFTDSLHIWDILLSDPEGPQETLLRVCCAMLIL
Sbjct: 361 RHLEITCKVNPQFYAFRWITLLLTQEFSFTDSLHIWDILLSDPEGPQETLLRVCCAMLIL 420

Query: 421 IRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRAHPTS 462
           IRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRAHPTS
Sbjct: 421 IRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRAHPTS 461

[Close]

BLAST of Spo01396.1 vs. NCBI nr
Match: gi|731325261|ref|XP_010673420.1| (PREDICTED: TBC1 domain family member 13 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 700.3 bits (1806), Expect = 2.300e-198
Identity = 371/463 (80.13%), Postives = 395/463 (85.31%), Query Frame = 1

		  
Query: 1   MVNENEKQKKQQKKKVPDWLNSSLWSTPFPSATNLTKTEDRTTFSDDGLITRTTDRPTSS 60
           M+NE +KQKK    KVP+WLNSSLWSTP P     ++ ED +                 S
Sbjct: 1   MLNEKDKQKK----KVPEWLNSSLWSTPAPVPPT-SEPEDLSV----------------S 60

Query: 61  DGVVITRPPSPVRPPPPPPPPSSPPFQSSDSNGTSTSSASPSPEEIARQAQLLVELSKKV 120
           D +V  RPPSPV PP PP PP S        NGTSTS++S SPE+IARQAQL VELSKKV
Sbjct: 61  DSIV--RPPSPVLPPQPPSPPPS-------DNGTSTSTSSASPEQIARQAQLFVELSKKV 120

Query: 121 INMREIRRLASMGLPDA--PVIRSTVWKLLLAYLPSDRAMWPSELAKKRSQYKHFKDDLL 180
           INMRE+RRLAS GLPDA  P IRSTVWKLLLAYLP+DR  WPSELAKKRSQYKHFKDDLL
Sbjct: 121 INMREVRRLASFGLPDAEAPSIRSTVWKLLLAYLPNDRTTWPSELAKKRSQYKHFKDDLL 180

Query: 181 MSPSEISRKLEKSSLADKDELKGESRCVLSRSEIVQDEHPLSLGQSSLWNQFFQDTEIIE 240
           MSPSEIS     SS ADKD+LKGE RCVLSRS+++ DEHPLSLG+SS WN FFQDTEIIE
Sbjct: 181 MSPSEIS-----SSFADKDQLKGEGRCVLSRSQVIHDEHPLSLGKSSAWNLFFQDTEIIE 240

Query: 241 QIDRDVKRTHPDMHFFSGDTVSAKLNQDALRNILIVFAKLNPGIRYVQGMNELLAPLFYV 300
           QIDRDVKRTHPDM FFSGDT SAKLNQ+ALRNILIVFAKLNPGIRYVQGMNE+LAPLFYV
Sbjct: 241 QIDRDVKRTHPDMLFFSGDTTSAKLNQEALRNILIVFAKLNPGIRYVQGMNEILAPLFYV 300

Query: 301 FRNDPDDENSAAAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEE 360
           FRNDPD++N+AAAEADTFFCFVELLSG RDNFCQQLDNSVVGIRSTITKLSL LKEHDEE
Sbjct: 301 FRNDPDEDNAAAAEADTFFCFVELLSGFRDNFCQQLDNSVVGIRSTITKLSLFLKEHDEE 360

Query: 361 LWRHLEITCKVNPQFYAFRWITLLLTQEFSFTDSLHIWDILLSDPEGPQETLLRVCCAML 420
           LWRHLEITCKVNPQFYAFRWITLLLTQEF+FTDSLHIWD LLSDPEGPQETLLR+CCAML
Sbjct: 361 LWRHLEITCKVNPQFYAFRWITLLLTQEFNFTDSLHIWDTLLSDPEGPQETLLRICCAML 420

Query: 421 ILIRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRAHPTS 462
           ILIRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRAHPTS
Sbjct: 421 ILIRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRAHPTS 428

[Close]

BLAST of Spo01396.1 vs. NCBI nr
Match: gi|731325263|ref|XP_010673421.1| (PREDICTED: TBC1 domain family member 13 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 682.2 bits (1759), Expect = 6.400e-193
Identity = 362/463 (78.19%), Postives = 386/463 (83.37%), Query Frame = 1

		  
Query: 1   MVNENEKQKKQQKKKVPDWLNSSLWSTPFPSATNLTKTEDRTTFSDDGLITRTTDRPTSS 60
           M+NE +KQKK    KVP+WLNSSLWSTP P     ++ ED +                 S
Sbjct: 1   MLNEKDKQKK----KVPEWLNSSLWSTPAPVPPT-SEPEDLSV----------------S 60

Query: 61  DGVVITRPPSPVRPPPPPPPPSSPPFQSSDSNGTSTSSASPSPEEIARQAQLLVELSKKV 120
           D +V  RPPSPV PP PP PP S        NGTSTS++S SPE+IARQAQL VELSKKV
Sbjct: 61  DSIV--RPPSPVLPPQPPSPPPS-------DNGTSTSTSSASPEQIARQAQLFVELSKKV 120

Query: 121 INMREIRRLASMGLPDA--PVIRSTVWKLLLAYLPSDRAMWPSELAKKRSQYKHFKDDLL 180
           INMRE+RRLAS GLPDA  P IRSTVWKLLLAYLP+DR  WPSELAKKRSQYKHFKDDLL
Sbjct: 121 INMREVRRLASFGLPDAEAPSIRSTVWKLLLAYLPNDRTTWPSELAKKRSQYKHFKDDLL 180

Query: 181 MSPSEISRKLEKSSLADKDELKGESRCVLSRSEIVQDEHPLSLGQSSLWNQFFQDTEIIE 240
           MSP               D+LKGE RCVLSRS+++ DEHPLSLG+SS WN FFQDTEIIE
Sbjct: 181 MSP---------------DQLKGEGRCVLSRSQVIHDEHPLSLGKSSAWNLFFQDTEIIE 240

Query: 241 QIDRDVKRTHPDMHFFSGDTVSAKLNQDALRNILIVFAKLNPGIRYVQGMNELLAPLFYV 300
           QIDRDVKRTHPDM FFSGDT SAKLNQ+ALRNILIVFAKLNPGIRYVQGMNE+LAPLFYV
Sbjct: 241 QIDRDVKRTHPDMLFFSGDTTSAKLNQEALRNILIVFAKLNPGIRYVQGMNEILAPLFYV 300

Query: 301 FRNDPDDENSAAAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEE 360
           FRNDPD++N+AAAEADTFFCFVELLSG RDNFCQQLDNSVVGIRSTITKLSL LKEHDEE
Sbjct: 301 FRNDPDEDNAAAAEADTFFCFVELLSGFRDNFCQQLDNSVVGIRSTITKLSLFLKEHDEE 360

Query: 361 LWRHLEITCKVNPQFYAFRWITLLLTQEFSFTDSLHIWDILLSDPEGPQETLLRVCCAML 420
           LWRHLEITCKVNPQFYAFRWITLLLTQEF+FTDSLHIWD LLSDPEGPQETLLR+CCAML
Sbjct: 361 LWRHLEITCKVNPQFYAFRWITLLLTQEFNFTDSLHIWDTLLSDPEGPQETLLRICCAML 418

Query: 421 ILIRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRAHPTS 462
           ILIRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRAHPTS
Sbjct: 421 ILIRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRAHPTS 418

[Close]

BLAST of Spo01396.1 vs. NCBI nr
Match: gi|645232547|ref|XP_008222917.1| (PREDICTED: TBC1 domain family member 13 [Prunus mume])

HSP 1 Score: 631.3 bits (1627), Expect = 1.300e-177
Identity = 333/457 (72.87%), Postives = 372/457 (81.40%), Query Frame = 1

		  
Query: 13  KKKVPDWLNSSLWS-TPFPSATNLTKTEDRTTFSDDGLITRTTDRPT---SSDGVVITRP 72
           KK+VP+WLNSSLWS TP PS              DD  +   T +PT   SS       P
Sbjct: 9   KKRVPEWLNSSLWSSTPSPSL-------------DDDRVQPYTSKPTTITSSSSTSDYEP 68

Query: 73  PSPVRPPPPPPPPSS-------PPFQSSDS--NGTSTSSASPSPEEIARQAQLLVELSKK 132
           PS V PP P PPP         P  QS+DS  N    ++ +PSPE+I+RQAQLLVELS+K
Sbjct: 69  PSMVDPPIPVPPPKPTREDKPPPQPQSTDSLPNHEDKNNTTPSPEDISRQAQLLVELSRK 128

Query: 133 VINMREIRRLASMGLPDAPVIRSTVWKLLLAYLPSDRAMWPSELAKKRSQYKHFKDDLLM 192
            IN+R++RR+AS G+PD   IRSTVWKLLL YLP DR +W SELAKKRSQYKHFKD+LLM
Sbjct: 129 TINLRDLRRIASQGIPDGAGIRSTVWKLLLGYLPPDRGLWSSELAKKRSQYKHFKDELLM 188

Query: 193 SPSEISRKLEKSSLADKDELKGESRCVLSRSEIVQDEHPLSLGQSSLWNQFFQDTEIIEQ 252
           +PSEI+RK++  +  D DE KG+ + +LSRSEI   EHPLSLGQSS+WNQFFQDTEIIEQ
Sbjct: 189 NPSEITRKMDNCTNCDTDESKGQGKGLLSRSEITHGEHPLSLGQSSVWNQFFQDTEIIEQ 248

Query: 253 IDRDVKRTHPDMHFFSGDTVSAKLNQDALRNILIVFAKLNPGIRYVQGMNELLAPLFYVF 312
           IDRDVKRTHPD+HFFSGD+  AK NQDAL+NILIVFAKLNPGIRYVQGMNE+LAPLFYVF
Sbjct: 249 IDRDVKRTHPDLHFFSGDSSDAKSNQDALKNILIVFAKLNPGIRYVQGMNEILAPLFYVF 308

Query: 313 RNDPDDENSAAAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEEL 372
           + DP++E++A+AEADTFFCFVELLSG RD+FCQQLDNSVVGIRSTITKLS LLKEHDEEL
Sbjct: 309 KTDPNEEDAASAEADTFFCFVELLSGFRDHFCQQLDNSVVGIRSTITKLSQLLKEHDEEL 368

Query: 373 WRHLEITCKVNPQFYAFRWITLLLTQEFSFTDSLHIWDILLSDPEGPQETLLRVCCAMLI 432
           WRHLEIT KVNPQFYAFRWITLLLTQEF+F DSLHIWD LLSDPEGPQETLLRVCCAMLI
Sbjct: 369 WRHLEITTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLSDPEGPQETLLRVCCAMLI 428

Query: 433 LIRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLR 457
           LIRRRLLAGDFTSNLKLLQNYP TNI HLLYVANKLR
Sbjct: 429 LIRRRLLAGDFTSNLKLLQNYPPTNIRHLLYVANKLR 452

[Close]

BLAST of Spo01396.1 vs. NCBI nr
Match: gi|596171124|ref|XP_007223135.1| (hypothetical protein PRUPE_ppa005462mg [Prunus persica])

HSP 1 Score: 630.9 bits (1626), Expect = 1.700e-177
Identity = 329/452 (72.79%), Postives = 371/452 (82.08%), Query Frame = 1

		  
Query: 13  KKKVPDWLNSSLWS-TPFPSATN-----LTKTEDRTTFSDDGLITRTTDRPTSSDGVVIT 72
           KK+VP+WLNSSLWS TP PS  +      T     TT       T   + P+  D  +  
Sbjct: 9   KKRVPEWLNSSLWSSTPSPSLDDDRVQPYTSKPTATTTITSSSSTSDYEPPSMVDPPIPV 68

Query: 73  RPPSPVRPPPPPPPPSSPPFQSSDS--NGTSTSSASPSPEEIARQAQLLVELSKKVINMR 132
            PP P R   PPP P     QS+DS  N    ++ +PSPE+I+RQAQLLVELS+K IN+R
Sbjct: 69  PPPKPTREDKPPPQP-----QSTDSLPNHEDKNNTTPSPEDISRQAQLLVELSRKTINLR 128

Query: 133 EIRRLASMGLPDAPVIRSTVWKLLLAYLPSDRAMWPSELAKKRSQYKHFKDDLLMSPSEI 192
           ++RR+AS G+PD   IRSTVWKLLL YLPSDR +W SEL KKRSQYKHFKD+LLM+PSEI
Sbjct: 129 DLRRIASQGIPDGAGIRSTVWKLLLGYLPSDRGLWSSELTKKRSQYKHFKDELLMNPSEI 188

Query: 193 SRKLEKSSLADKDELKGESRCVLSRSEIVQDEHPLSLGQSSLWNQFFQDTEIIEQIDRDV 252
           +RK++  +  D DE KG+S+ +LSRSEI   EHPLSLGQSS+WNQFFQDTEIIEQIDRDV
Sbjct: 189 TRKMDNCTNCDTDESKGQSKGLLSRSEITHGEHPLSLGQSSVWNQFFQDTEIIEQIDRDV 248

Query: 253 KRTHPDMHFFSGDTVSAKLNQDALRNILIVFAKLNPGIRYVQGMNELLAPLFYVFRNDPD 312
           KRTHPD+HFFSGD+  AK NQDAL+NILIVFAKLNPGIRYVQGMNE+LAPLFYVF+ DP+
Sbjct: 249 KRTHPDLHFFSGDSSDAKSNQDALKNILIVFAKLNPGIRYVQGMNEILAPLFYVFKTDPN 308

Query: 313 DENSAAAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEELWRHLE 372
           +E++A+AEADTFFCFVELLSG RD+FCQQLDNSVVGIRSTITKLS LLKEHDEELWRHLE
Sbjct: 309 EEDAASAEADTFFCFVELLSGFRDHFCQQLDNSVVGIRSTITKLSQLLKEHDEELWRHLE 368

Query: 373 ITCKVNPQFYAFRWITLLLTQEFSFTDSLHIWDILLSDPEGPQETLLRVCCAMLILIRRR 432
           IT KVNPQFYAFRWITLLLTQEF+F DSLHIWD LLSDPEGPQETLLRVCCAMLILIRRR
Sbjct: 369 ITTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLSDPEGPQETLLRVCCAMLILIRRR 428

Query: 433 LLAGDFTSNLKLLQNYPSTNISHLLYVANKLR 457
           LLAGDFTSNLKLLQNYP TNI HLLYVA+KLR
Sbjct: 429 LLAGDFTSNLKLLQNYPPTNIRHLLYVAHKLR 455

[Close]

BLAST of Spo01396.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RST7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_038300 PE=4 SV=1)

HSP 1 Score: 902.1 bits (2330), Expect = 2.700e-259
Identity = 461/461 (100.00%), Postives = 461/461 (100.00%), Query Frame = 1

		  
Query: 1   MVNENEKQKKQQKKKVPDWLNSSLWSTPFPSATNLTKTEDRTTFSDDGLITRTTDRPTSS 60
           MVNENEKQKKQQKKKVPDWLNSSLWSTPFPSATNLTKTEDRTTFSDDGLITRTTDRPTSS
Sbjct: 1   MVNENEKQKKQQKKKVPDWLNSSLWSTPFPSATNLTKTEDRTTFSDDGLITRTTDRPTSS 60

Query: 61  DGVVITRPPSPVRPPPPPPPPSSPPFQSSDSNGTSTSSASPSPEEIARQAQLLVELSKKV 120
           DGVVITRPPSPVRPPPPPPPPSSPPFQSSDSNGTSTSSASPSPEEIARQAQLLVELSKKV
Sbjct: 61  DGVVITRPPSPVRPPPPPPPPSSPPFQSSDSNGTSTSSASPSPEEIARQAQLLVELSKKV 120

Query: 121 INMREIRRLASMGLPDAPVIRSTVWKLLLAYLPSDRAMWPSELAKKRSQYKHFKDDLLMS 180
           INMREIRRLASMGLPDAPVIRSTVWKLLLAYLPSDRAMWPSELAKKRSQYKHFKDDLLMS
Sbjct: 121 INMREIRRLASMGLPDAPVIRSTVWKLLLAYLPSDRAMWPSELAKKRSQYKHFKDDLLMS 180

Query: 181 PSEISRKLEKSSLADKDELKGESRCVLSRSEIVQDEHPLSLGQSSLWNQFFQDTEIIEQI 240
           PSEISRKLEKSSLADKDELKGESRCVLSRSEIVQDEHPLSLGQSSLWNQFFQDTEIIEQI
Sbjct: 181 PSEISRKLEKSSLADKDELKGESRCVLSRSEIVQDEHPLSLGQSSLWNQFFQDTEIIEQI 240

Query: 241 DRDVKRTHPDMHFFSGDTVSAKLNQDALRNILIVFAKLNPGIRYVQGMNELLAPLFYVFR 300
           DRDVKRTHPDMHFFSGDTVSAKLNQDALRNILIVFAKLNPGIRYVQGMNELLAPLFYVFR
Sbjct: 241 DRDVKRTHPDMHFFSGDTVSAKLNQDALRNILIVFAKLNPGIRYVQGMNELLAPLFYVFR 300

Query: 301 NDPDDENSAAAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEELW 360
           NDPDDENSAAAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEELW
Sbjct: 301 NDPDDENSAAAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEELW 360

Query: 361 RHLEITCKVNPQFYAFRWITLLLTQEFSFTDSLHIWDILLSDPEGPQETLLRVCCAMLIL 420
           RHLEITCKVNPQFYAFRWITLLLTQEFSFTDSLHIWDILLSDPEGPQETLLRVCCAMLIL
Sbjct: 361 RHLEITCKVNPQFYAFRWITLLLTQEFSFTDSLHIWDILLSDPEGPQETLLRVCCAMLIL 420

Query: 421 IRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRAHPTS 462
           IRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRAHPTS
Sbjct: 421 IRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRAHPTS 461

[Close]

BLAST of Spo01396.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CSA7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g065810 PE=4 SV=1)

HSP 1 Score: 700.3 bits (1806), Expect = 1.600e-198
Identity = 371/463 (80.13%), Postives = 395/463 (85.31%), Query Frame = 1

		  
Query: 1   MVNENEKQKKQQKKKVPDWLNSSLWSTPFPSATNLTKTEDRTTFSDDGLITRTTDRPTSS 60
           M+NE +KQKK    KVP+WLNSSLWSTP P     ++ ED +                 S
Sbjct: 1   MLNEKDKQKK----KVPEWLNSSLWSTPAPVPPT-SEPEDLSV----------------S 60

Query: 61  DGVVITRPPSPVRPPPPPPPPSSPPFQSSDSNGTSTSSASPSPEEIARQAQLLVELSKKV 120
           D +V  RPPSPV PP PP PP S        NGTSTS++S SPE+IARQAQL VELSKKV
Sbjct: 61  DSIV--RPPSPVLPPQPPSPPPS-------DNGTSTSTSSASPEQIARQAQLFVELSKKV 120

Query: 121 INMREIRRLASMGLPDA--PVIRSTVWKLLLAYLPSDRAMWPSELAKKRSQYKHFKDDLL 180
           INMRE+RRLAS GLPDA  P IRSTVWKLLLAYLP+DR  WPSELAKKRSQYKHFKDDLL
Sbjct: 121 INMREVRRLASFGLPDAEAPSIRSTVWKLLLAYLPNDRTTWPSELAKKRSQYKHFKDDLL 180

Query: 181 MSPSEISRKLEKSSLADKDELKGESRCVLSRSEIVQDEHPLSLGQSSLWNQFFQDTEIIE 240
           MSPSEIS     SS ADKD+LKGE RCVLSRS+++ DEHPLSLG+SS WN FFQDTEIIE
Sbjct: 181 MSPSEIS-----SSFADKDQLKGEGRCVLSRSQVIHDEHPLSLGKSSAWNLFFQDTEIIE 240

Query: 241 QIDRDVKRTHPDMHFFSGDTVSAKLNQDALRNILIVFAKLNPGIRYVQGMNELLAPLFYV 300
           QIDRDVKRTHPDM FFSGDT SAKLNQ+ALRNILIVFAKLNPGIRYVQGMNE+LAPLFYV
Sbjct: 241 QIDRDVKRTHPDMLFFSGDTTSAKLNQEALRNILIVFAKLNPGIRYVQGMNEILAPLFYV 300

Query: 301 FRNDPDDENSAAAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEE 360
           FRNDPD++N+AAAEADTFFCFVELLSG RDNFCQQLDNSVVGIRSTITKLSL LKEHDEE
Sbjct: 301 FRNDPDEDNAAAAEADTFFCFVELLSGFRDNFCQQLDNSVVGIRSTITKLSLFLKEHDEE 360

Query: 361 LWRHLEITCKVNPQFYAFRWITLLLTQEFSFTDSLHIWDILLSDPEGPQETLLRVCCAML 420
           LWRHLEITCKVNPQFYAFRWITLLLTQEF+FTDSLHIWD LLSDPEGPQETLLR+CCAML
Sbjct: 361 LWRHLEITCKVNPQFYAFRWITLLLTQEFNFTDSLHIWDTLLSDPEGPQETLLRICCAML 420

Query: 421 ILIRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRAHPTS 462
           ILIRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRAHPTS
Sbjct: 421 ILIRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRAHPTS 428

[Close]

BLAST of Spo01396.1 vs. UniProtKB/TrEMBL
Match: M5XEH4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005462mg PE=4 SV=1)

HSP 1 Score: 630.9 bits (1626), Expect = 1.200e-177
Identity = 329/452 (72.79%), Postives = 371/452 (82.08%), Query Frame = 1

		  
Query: 13  KKKVPDWLNSSLWS-TPFPSATN-----LTKTEDRTTFSDDGLITRTTDRPTSSDGVVIT 72
           KK+VP+WLNSSLWS TP PS  +      T     TT       T   + P+  D  +  
Sbjct: 9   KKRVPEWLNSSLWSSTPSPSLDDDRVQPYTSKPTATTTITSSSSTSDYEPPSMVDPPIPV 68

Query: 73  RPPSPVRPPPPPPPPSSPPFQSSDS--NGTSTSSASPSPEEIARQAQLLVELSKKVINMR 132
            PP P R   PPP P     QS+DS  N    ++ +PSPE+I+RQAQLLVELS+K IN+R
Sbjct: 69  PPPKPTREDKPPPQP-----QSTDSLPNHEDKNNTTPSPEDISRQAQLLVELSRKTINLR 128

Query: 133 EIRRLASMGLPDAPVIRSTVWKLLLAYLPSDRAMWPSELAKKRSQYKHFKDDLLMSPSEI 192
           ++RR+AS G+PD   IRSTVWKLLL YLPSDR +W SEL KKRSQYKHFKD+LLM+PSEI
Sbjct: 129 DLRRIASQGIPDGAGIRSTVWKLLLGYLPSDRGLWSSELTKKRSQYKHFKDELLMNPSEI 188

Query: 193 SRKLEKSSLADKDELKGESRCVLSRSEIVQDEHPLSLGQSSLWNQFFQDTEIIEQIDRDV 252
           +RK++  +  D DE KG+S+ +LSRSEI   EHPLSLGQSS+WNQFFQDTEIIEQIDRDV
Sbjct: 189 TRKMDNCTNCDTDESKGQSKGLLSRSEITHGEHPLSLGQSSVWNQFFQDTEIIEQIDRDV 248

Query: 253 KRTHPDMHFFSGDTVSAKLNQDALRNILIVFAKLNPGIRYVQGMNELLAPLFYVFRNDPD 312
           KRTHPD+HFFSGD+  AK NQDAL+NILIVFAKLNPGIRYVQGMNE+LAPLFYVF+ DP+
Sbjct: 249 KRTHPDLHFFSGDSSDAKSNQDALKNILIVFAKLNPGIRYVQGMNEILAPLFYVFKTDPN 308

Query: 313 DENSAAAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEELWRHLE 372
           +E++A+AEADTFFCFVELLSG RD+FCQQLDNSVVGIRSTITKLS LLKEHDEELWRHLE
Sbjct: 309 EEDAASAEADTFFCFVELLSGFRDHFCQQLDNSVVGIRSTITKLSQLLKEHDEELWRHLE 368

Query: 373 ITCKVNPQFYAFRWITLLLTQEFSFTDSLHIWDILLSDPEGPQETLLRVCCAMLILIRRR 432
           IT KVNPQFYAFRWITLLLTQEF+F DSLHIWD LLSDPEGPQETLLRVCCAMLILIRRR
Sbjct: 369 ITTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLSDPEGPQETLLRVCCAMLILIRRR 428

Query: 433 LLAGDFTSNLKLLQNYPSTNISHLLYVANKLR 457
           LLAGDFTSNLKLLQNYP TNI HLLYVA+KLR
Sbjct: 429 LLAGDFTSNLKLLQNYPPTNIRHLLYVAHKLR 455

[Close]

BLAST of Spo01396.1 vs. UniProtKB/TrEMBL
Match: W9RXZ6_9ROSA (TBC1 domain family member 13 OS=Morus notabilis GN=L484_021629 PE=4 SV=1)

HSP 1 Score: 630.6 bits (1625), Expect = 1.500e-177
Identity = 328/456 (71.93%), Postives = 369/456 (80.92%), Query Frame = 1

		  
Query: 13  KKKVPDWLNSSLWSTPFPSATNLTKTEDRTTFSDDGLITRTTDRPTSSDGVVITRP--PS 72
           KK+VPDWLNSSLWS+  P               DD  + R      ++  + +T    P+
Sbjct: 3   KKRVPDWLNSSLWSSNPPP--------------DDDSLQRYASNSATTAAITVTSTSEPA 62

Query: 73  PVRPPPPPPPPSS-----PPFQSSDSNGTST-----SSASPSPEEIARQAQLLVELSKKV 132
            V PP P  PPS+     PP +    +  S      +S +PS E+I+R AQLL ELSKKV
Sbjct: 63  KVEPPVPVAPPSAAAERAPPAKRETEDSLSVEEENGASGAPSAEDISRHAQLLAELSKKV 122

Query: 133 INMREIRRLASMGLPDAPVIRSTVWKLLLAYLPSDRAMWPSELAKKRSQYKHFKDDLLMS 192
           INMRE+RR+AS G+PD   IRSTVWKLLL YLP DR++WP+ELAKKRSQYKHFKDDLLM+
Sbjct: 123 INMRELRRIASQGIPDGAGIRSTVWKLLLGYLPPDRSLWPTELAKKRSQYKHFKDDLLMN 182

Query: 193 PSEISRKLEKSSLADKDELKGESRCVLSRSEIVQDEHPLSLGQSSLWNQFFQDTEIIEQI 252
           PSE++R+L+KS+  D D+   E RC+LSRSEI   EHPLSLG++S+WNQFFQDTEIIEQI
Sbjct: 183 PSEVARRLDKSTSFDNDDSNCEGRCLLSRSEISHGEHPLSLGKTSIWNQFFQDTEIIEQI 242

Query: 253 DRDVKRTHPDMHFFSGDTVSAKLNQDALRNILIVFAKLNPGIRYVQGMNELLAPLFYVFR 312
           DRDVKRTHPDMHFFSGD+  AK NQ+AL+NIL+VFAKLNPGIRYVQGMNE+LAPLFYVF+
Sbjct: 243 DRDVKRTHPDMHFFSGDSQFAKSNQEALKNILMVFAKLNPGIRYVQGMNEILAPLFYVFK 302

Query: 313 NDPDDENSAAAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEELW 372
           NDPD+EN A AEADTFFCFVELLSG RDNFCQQLDNSVVGIRSTITKLS LLKEHDEELW
Sbjct: 303 NDPDEENMACAEADTFFCFVELLSGFRDNFCQQLDNSVVGIRSTITKLSQLLKEHDEELW 362

Query: 373 RHLEITCKVNPQFYAFRWITLLLTQEFSFTDSLHIWDILLSDPEGPQETLLRVCCAMLIL 432
           RHLE+T KVNPQFYAFRWITLLLTQEF+F DSLHIWD LLSDPEGPQETLLRVCCAMLIL
Sbjct: 363 RHLEVTTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLSDPEGPQETLLRVCCAMLIL 422

Query: 433 IRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLR 457
           IRRRLLAGDFTSNLKLLQNYP TNISHLLYVANKLR
Sbjct: 423 IRRRLLAGDFTSNLKLLQNYPPTNISHLLYVANKLR 444

[Close]

BLAST of Spo01396.1 vs. UniProtKB/TrEMBL
Match: D7SNI7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0029g01350 PE=4 SV=1)

HSP 1 Score: 629.0 bits (1621), Expect = 4.500e-177
Identity = 334/454 (73.57%), Postives = 370/454 (81.50%), Query Frame = 1

		  
Query: 13  KKKVPDWLNSSLWSTPFPSATNLTKTEDRTTFSDDGLITRTTDRPTSSDGVVITRPPSPV 72
           KK+VPDWLNSSLWS   PSAT            +D  + R   +P++        PPSPV
Sbjct: 3   KKRVPDWLNSSLWSAS-PSAT------------EDDRLQRYDSKPSTPT------PPSPV 62

Query: 73  RPPPPPPPPS------SPPFQSSDSNGTSTSSASPSPEEIARQAQLLVELSKKVINMREI 132
            PP P PPP+        P      N    +S+  S E+I+RQAQLL ELSKKVIN+RE+
Sbjct: 63  APPVPEPPPAVVQEEPPKPEPKESVNNVHDASSDDSAEDISRQAQLLAELSKKVINVREL 122

Query: 133 RRLASMGLPDAPVIRSTVWKLLLAYLPSDRAMWPSELAKKRSQYKHFKDDLLMSPSEISR 192
           RRLAS G+PD   IRSTVWKLLL YLP+DR  W SELAKKRSQYKHFK++LLM+PSEI+R
Sbjct: 123 RRLASQGIPDGAGIRSTVWKLLLGYLPTDRGHWSSELAKKRSQYKHFKEELLMNPSEITR 182

Query: 193 KLEKSSLADKDELKGESRCVLSRSEIVQDEHPLSLGQSSLWNQFFQDTEIIEQIDRDVKR 252
           +L KS+  D DE K E   +LSRSEI   EHPLSLG++S+WNQFFQDTEIIEQIDRDVKR
Sbjct: 183 RLGKSTSPD-DEPKSEGSGMLSRSEITHGEHPLSLGKTSIWNQFFQDTEIIEQIDRDVKR 242

Query: 253 THPDMHFFSGDTVSAKLNQDALRNILIVFAKLNPGIRYVQGMNELLAPLFYVFRNDPDDE 312
           THPDM+FFSGDT SAK NQDALRNILIVFAKLNPGIRYVQGMNE+LAPLFYVF+NDPD+E
Sbjct: 243 THPDMNFFSGDTPSAKTNQDALRNILIVFAKLNPGIRYVQGMNEILAPLFYVFKNDPDEE 302

Query: 313 NSAAAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEELWRHLEIT 372
           N+A+AEADTFFCFVELLSG RD+FCQQLDNSVVGIRSTIT+LS LLKEHD ELWRHLEIT
Sbjct: 303 NAASAEADTFFCFVELLSGFRDHFCQQLDNSVVGIRSTITRLSQLLKEHDGELWRHLEIT 362

Query: 373 CKVNPQFYAFRWITLLLTQEFSFTDSLHIWDILLSDPEGPQETLLRVCCAMLILIRRRLL 432
            KVNPQFYAFRWITLLLTQEF+F DSLHIWD LLSDPEGPQETLLR+CCAMLIL+RRRLL
Sbjct: 363 TKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLSDPEGPQETLLRICCAMLILVRRRLL 422

Query: 433 AGDFTSNLKLLQNYPSTNISHLLYVANKLRAHPT 461
           AGDFTSNLKLLQNYPSTNISHLLYVANKLRA  T
Sbjct: 423 AGDFTSNLKLLQNYPSTNISHLLYVANKLRAQST 436

[Close]

BLAST of Spo01396.1 vs. ExPASy Swiss-Prot
Match: TBC13_HUMAN (TBC1 domain family member 13 OS=Homo sapiens GN=TBC1D13 PE=1 SV=3)

HSP 1 Score: 194.5 bits (493), Expect = 2.500e-48
Identity = 96/191 (50.26%), Postives = 132/191 (69.11%), Query Frame = 1

		  
Query: 266 DALRNILIVFAKLNPGIRYVQGMNELLAPLFYVFRNDPDDENSAAAEADTFFCFVELLSG 325
           + +  IL ++AKLNPGI YVQGMNE++ PL+Y F  DP+ E    AEADTFFCF  L++ 
Sbjct: 209 EVVERILFIYAKLNPGIAYVQGMNEIVGPLYYTFATDPNSEWKEHAEADTFFCFTNLMAE 268

Query: 326 LRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEELWRHLEITCKVNPQFYAFRWITLLLTQ 385
           +RDNF + LD+S  GI   + K+   LK+ D EL+  L+    + PQF+AFRW+TLLL+Q
Sbjct: 269 IRDNFIKSLDDSQCGITYKMEKVYSTLKDKDVELYLKLQ-EQNIKPQFFAFRWLTLLLSQ 328

Query: 386 EFSFTDSLHIWDILLSDPEGPQETLLRVCCAMLILIRRRLLAGDFTSNLKLLQNYPSTNI 445
           EF   D + IWD L +D +   + LL VCCAML+LIR +LL GDFT N++LLQ+YP T++
Sbjct: 329 EFLLPDVIRIWDSLFAD-DNRFDFLLLVCCAMLMLIREQLLEGDFTVNMRLLQDYPITDV 388

Query: 446 SHLLYVANKLR 457
             +L  A +L+
Sbjct: 389 CQILQKAKELQ 397

[Close]

BLAST of Spo01396.1 vs. ExPASy Swiss-Prot
Match: TBC13_MOUSE (TBC1 domain family member 13 OS=Mus musculus GN=Tbc1d13 PE=1 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 3.300e-48
Identity = 97/191 (50.79%), Postives = 131/191 (68.59%), Query Frame = 1

		  
Query: 266 DALRNILIVFAKLNPGIRYVQGMNELLAPLFYVFRNDPDDENSAAAEADTFFCFVELLSG 325
           + +  IL ++AKLNPGI YVQGMNE++ PL+Y F  DP+ E    AEADTFFCF  L++ 
Sbjct: 209 EVVERILFIYAKLNPGIAYVQGMNEIVGPLYYTFATDPNSEWKEHAEADTFFCFTNLMAE 268

Query: 326 LRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEELWRHLEITCKVNPQFYAFRWITLLLTQ 385
           +RDNF + LD+S  GI   + K+   LK+ D EL+  L+    + PQF+AFRW+TLLL+Q
Sbjct: 269 IRDNFIKSLDDSQCGITYKMEKVYSTLKDKDVELYLKLQ-EQSIKPQFFAFRWLTLLLSQ 328

Query: 386 EFSFTDSLHIWDILLSDPEGPQETLLRVCCAMLILIRRRLLAGDFTSNLKLLQNYPSTNI 445
           EF   D + IWD L +D     + LL VCCAMLILIR +LL GDFT N++LLQ+YP T++
Sbjct: 329 EFLLPDVIRIWDSLFAD-GNRFDFLLLVCCAMLILIREQLLEGDFTVNMRLLQDYPITDV 388

Query: 446 SHLLYVANKLR 457
             +L  A +L+
Sbjct: 389 CQILQKAKELQ 397

[Close]

BLAST of Spo01396.1 vs. ExPASy Swiss-Prot
Match: YLOH_SCHPO (TBC domain-containing protein C1952.17c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1952.17c PE=3 SV=4)

HSP 1 Score: 152.1 bits (383), Expect = 1.400e-35
Identity = 80/208 (38.46%), Postives = 127/208 (61.06%), Query Frame = 1

		  
Query: 263 LNQDALRNILIVFAKLNPGIRYVQGMNELLAPLFYVFRNDPDDENSAAAEADTFFCFVEL 322
           L+++A   IL ++AKLNPGI YVQGMNE+LAPL+YV   DP  EN    E D FF F ++
Sbjct: 247 LHREAAERILFIYAKLNPGIGYVQGMNEILAPLYYVLATDPTYENYYLCECDAFFLFTQM 306

Query: 323 LSGLRDNFCQQLD-NSVVGIRSTITKLSLLLKEHDEELWRHLEITCKVNPQFYAFRWITL 382
           +  +RD + + LD +S  GI   ++K +  LK++D ELW +LE   +++P +Y+FRW T 
Sbjct: 307 MVQVRDLYEKTLDHDSDHGIHFLMSKFTERLKKYDYELWENLE-EKQIHPTYYSFRWFTC 366

Query: 383 LLTQEFSFTDSLHIWDILLSDP-------------EGPQETLLRVCCAMLILIRRRLLAG 442
           LL+QEF   D + +WD +++D               G  + L+  CC++LI +R  +L  
Sbjct: 367 LLSQEFPLPDVIRLWDSIIADQMKARLFGKNDDGFNGAYDFLMDFCCSILIELRESILER 426

Query: 443 DFTSNLKLLQNYPSTNISHLLYVANKLR 457
           +F  ++KLLQ + + ++  LL +  +L+
Sbjct: 427 NFADSIKLLQAHFNVDMPKLLNLTFELQ 453

[Close]

BLAST of Spo01396.1 vs. ExPASy Swiss-Prot
Match: TBCD5_HUMAN (TBC1 domain family member 5 OS=Homo sapiens GN=TBC1D5 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.600e-32
Identity = 116/401 (28.93%), Postives = 178/401 (44.39%), Query Frame = 1

		  
Query: 89  SDSNGTSTSSASPSPEEIARQAQLLVELSKKVINMREIRRLASMGLPDAPVIRSTVWKLL 148
           S+ NG  TSS   S        +   EL      +  IR+    G   +   RS  WKL 
Sbjct: 35  SNKNGRRTSSTLDSEGTFNSYRKEWEELFVNNNYLATIRQKGINGQLRSSRFRSICWKLF 94

Query: 149 LAYLPSDRAMWPSELAKKRSQYKHFKDDLLMSPSEISRKLEKSSLADKDELKGESRCVLS 208
           L  LP D++ W S + + R+ Y + K+  + +P                      R V+ 
Sbjct: 95  LCVLPQDKSQWISRIEELRAWYSNIKEIHITNP----------------------RKVVG 154

Query: 209 RSEIVQDEHPLSLGQSSLWNQFFQDTEIIEQIDRDVKRTHPDMHFFSGDTVSAKLNQDAL 268
           + +++ + +PLS  + SLWN+FFQD E+   I++DVKRT P+M FF  + V     +  L
Sbjct: 155 QQDLMIN-NPLSQDEGSLWNKFFQDKELRSMIEQDVKRTFPEMQFFQQENV-----RKIL 214

Query: 269 RNILIVFAKLNPGIRYVQGMNELLAPLFYVFRND------------PDDE-----NSAAA 328
            ++L  +A+ N  + Y QGM+ELLAP+ +V   D            P +E     N    
Sbjct: 215 TDVLFCYARENEQLLYKQGMHELLAPIVFVLHCDHQAFLHASESAQPSEEMKTVLNPEYL 274

Query: 329 EADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITKLSL--------------------- 388
           E D +  F +L+      F     +   G  + +T +                       
Sbjct: 275 EHDAYAVFSQLMETAEPWFSTFEHDGQKGKETLMTPIPFARPQDLGPTIAIVTKVNQIQD 334

Query: 389 -LLKEHDEELWRHLEITCKVNPQFYAFRWITLLLTQEFSFTDSLHIWDILLSDPEGPQET 448
            LLK+HD EL+ HL    ++ PQ Y  RW+ LL  +EF   D L +WD L +D  G    
Sbjct: 335 HLLKKHDIELYMHLN-RLEIAPQIYGLRWVRLLFGREFPLQDLLVVWDALFAD--GLSLG 394

Query: 449 LL-RVCCAMLILIRRRLLAGDFTSNLKLLQNYPSTNISHLL 450
           L+  +  AML+ IR  L++ ++ + L LL +YP     H L
Sbjct: 395 LVDYIFVAMLLYIRDALISSNYQTCLGLLMHYPFIGDVHSL 404

[Close]

BLAST of Spo01396.1 vs. ExPASy Swiss-Prot
Match: TBCD5_MOUSE (TBC1 domain family member 5 OS=Mus musculus GN=Tbc1d5 PE=1 SV=2)

HSP 1 Score: 139.4 bits (350), Expect = 9.700e-32
Identity = 102/348 (29.31%), Postives = 156/348 (44.83%), Query Frame = 1

		  
Query: 141 RSTVWKLLLAYLPSDRAMWPSELAKKRSQYKHFKDDLLMSPSEISRKLEKSSLADKDELK 200
           RS  WKL L  LP D++ W S++ + R+ Y   K+  + +P + +               
Sbjct: 87  RSICWKLFLCVLPQDKSQWISKIKELRAWYSSIKEIHITNPRKAA--------------- 146

Query: 201 GESRCVLSRSEIVQDEHPLSLGQSSLWNQFFQDTEIIEQIDRDVKRTHPDMHFFSGDTVS 260
           G+   +++        +PLS  + SLWN+FFQD E+   I++DVKRT P+M FF  + V 
Sbjct: 147 GQQDLMIN--------NPLSQDEGSLWNKFFQDKELRSMIEQDVKRTFPEMQFFQQENV- 206

Query: 261 AKLNQDALRNILIVFAKLNPGIRYVQGMNELLAPLFYVFRND------------PDDE-- 320
               +  L ++L  +A+ N  + Y QGM+ELLAP+ +    D            P +E  
Sbjct: 207 ----RKILTDVLFCYARENEQLLYKQGMHELLAPIIFTLHCDHQAFLHASESAQPSEEMK 266

Query: 321 ---NSAAAEADTFFCFVELLSGLRDNFC----------------------QQLDNSVVGI 380
              N    E D +  F +L+      F                       Q L  +V  +
Sbjct: 267 TLLNPEYLEHDAYAMFSQLMETAEPWFSTFEHDGQKGKETLMAPIPFARPQDLGPTVAIV 326

Query: 381 RSTITKLSLLLKEHDEELWRHLEITCKVNPQFYAFRWITLLLTQEFSFTDSLHIWDILLS 440
                    LLK+HD EL+ HL    ++ PQ Y  RW+ LL  +EF   D L +WD L +
Sbjct: 327 TKVNQIQDHLLKKHDIELYMHLN-RLEIAPQIYGLRWVRLLFGREFPLQDLLVVWDALFA 386

Query: 441 DPEGPQETLLRVCCAMLILIRRRLLAGDFTSNLKLLQNYPSTNISHLL 450
           D       +  V  AML+ IR  L++ ++ + L LL +YP     H L
Sbjct: 387 DSLN-LSLVDYVFTAMLLYIRDALISSNYQTCLGLLMHYPIIGDIHSL 404

[Close]

BLAST of Spo01396.1 vs. TAIR (Arabidopsis)
Match: AT4G13730.1 (Ypt/Rab-GAP domain of gyp1p superfamily protein)

HSP 1 Score: 567.4 bits (1461), Expect = 8.100e-162
Identity = 294/448 (65.62%), Postives = 354/448 (79.02%), Query Frame = 1

		  
Query: 13  KKKVPDWLNSSLWSTPFPSATNLTKTEDRTTFSDDGLITRTTDRP--TSSDGVVITRP-- 72
           KK +P+WLNSSLWS+  P      +    T+ +         +RP  +SS   + T P  
Sbjct: 3   KKGIPEWLNSSLWSSSPPIDDRHLRNPAATSITPPS--PPIVERPPFSSSPSAISTAPAP 62

Query: 73  PSPVRPPPPPPPPSSPPFQSSDSNGTSTSSASPSPEEIARQAQLLVELSKKVINMREIRR 132
           P PVRPP             +D  G  T + S S E+++R+AQ++ ELSKKVI+++E+R+
Sbjct: 63  PLPVRPPSKSEINDLQNGSGNDGAGIETPAVS-SVEDVSRKAQVVAELSKKVIDLKELRK 122

Query: 133 LASMGLPDAPVIRSTVWKLLLAYLPSDRAMWPSELAKKRSQYKHFKDDLLMSPSEISRKL 192
           +AS GLPD   IRS VWKLLL YL  DR++W SELAKKRSQYK FK++LLM+PSE++RK+
Sbjct: 123 IASQGLPDDAGIRSIVWKLLLDYLSPDRSLWSSELAKKRSQYKQFKEELLMNPSEVTRKM 182

Query: 193 EKSSLADKDELKGESRCVLSRSEIVQDEHPLSLGQSSLWNQFFQDTEIIEQIDRDVKRTH 252
           +KS   D ++ K ES   LSRSEI  ++HPLSLG +SLWN FF+DTE++EQI+RDV RTH
Sbjct: 183 DKSKGGDSNDPKIESPGALSRSEITHEDHPLSLGTTSLWNNFFKDTEVLEQIERDVMRTH 242

Query: 253 PDMHFFSGDTVSAKLNQDALRNILIVFAKLNPGIRYVQGMNELLAPLFYVFRNDPDDENS 312
           PDMHFFSGD+  AK NQDAL+NIL +FAKLNPGIRYVQGMNE+LAP+FY+F+NDPD  N+
Sbjct: 243 PDMHFFSGDSAVAKSNQDALKNILTIFAKLNPGIRYVQGMNEILAPIFYIFKNDPDKGNA 302

Query: 313 AAAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEELWRHLEITCK 372
           A AE+D FFCFVEL+SG RDNFCQQLDNSVVGIR TIT+LSLLLK HDEELWRHLE+T K
Sbjct: 303 AYAESDAFFCFVELMSGFRDNFCQQLDNSVVGIRYTITRLSLLLKHHDEELWRHLEVTTK 362

Query: 373 VNPQFYAFRWITLLLTQEFSFTDSLHIWDILLSDPEGPQETLLRVCCAMLILIRRRLLAG 432
           +NPQFYAFRWITLLLTQEF+F +SLHIWD LLSDPEGPQETLLR+CCAMLIL+RRRLLAG
Sbjct: 363 INPQFYAFRWITLLLTQEFNFVESLHIWDTLLSDPEGPQETLLRICCAMLILVRRRLLAG 422

Query: 433 DFTSNLKLLQNYPSTNISHLLYVANKLR 457
           DFTSNLKLLQNYP TNISH+LYVA+KLR
Sbjct: 423 DFTSNLKLLQNYPPTNISHMLYVADKLR 447

[Close]

BLAST of Spo01396.1 vs. TAIR (Arabidopsis)
Match: AT1G04830.2 (Ypt/Rab-GAP domain of gyp1p superfamily protein)

HSP 1 Score: 547.7 bits (1410), Expect = 6.700e-156
Identity = 281/447 (62.86%), Postives = 345/447 (77.18%), Query Frame = 1

		  
Query: 13  KKKVPDWLNSSLWSTPFPSATNLTKTEDRTTFSDDGLITRTTDRPTSSDGVVITRPPSPV 72
           +KKVP+WLNS++WSTP P ++            DDGL+  +       +   I+  P   
Sbjct: 3   RKKVPEWLNSTMWSTPPPPSSY-----------DDGLLRHSPVTKMKEEAESISVAPRLN 62

Query: 73  RPPPPPPPPSSPPFQSSDSNGTSTSSAS--------PSPEEIARQAQLLVELSKKVINMR 132
             PPP    S P       NG S S  S        PS E+ +RQA +  ELSKKVINM+
Sbjct: 63  SAPPPSSNTSVPSPSHRPRNGNSISGGSGEYGHSVGPSAEDFSRQAHVSAELSKKVINMK 122

Query: 133 EIRRLASMGLPDAPVIRSTVWKLLLAYLPSDRAMWPSELAKKRSQYKHFKDDLLMSPSEI 192
           E+R LA   LPD+P IRSTVWKLLL YLP +R++W +EL +KRSQYKH+KD+LL SPSEI
Sbjct: 123 ELRSLALQSLPDSPGIRSTVWKLLLGYLPPERSLWSTELKQKRSQYKHYKDELLTSPSEI 182

Query: 193 SRKLEKSSLADKDELKGESRCVLSRSEIVQDEHPLSLGQSSLWNQFFQDTEIIEQIDRDV 252
           + K+ +S   D  +LK ESRC+L+RS I  ++HPLSLG++S+WN +FQDTE IEQIDRDV
Sbjct: 183 TWKMVRSKGFDNYDLKSESRCMLARSRITDEDHPLSLGKASIWNTYFQDTETIEQIDRDV 242

Query: 253 KRTHPDMHFFSGDTVSAKLNQDALRNILIVFAKLNPGIRYVQGMNELLAPLFYVFRNDPD 312
           KRTHPD+ FFSG++  A+ NQ++++NIL+VFAKLN GIRYVQGMNE+LAP+FYVFRNDPD
Sbjct: 243 KRTHPDIPFFSGESSFARSNQESMKNILLVFAKLNQGIRYVQGMNEILAPIFYVFRNDPD 302

Query: 313 DENSAAAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEELWRHLE 372
           +++S+ AEAD FFCFVELLSG RD +CQQLDNSVVGIRS IT+LS L+++HDEELWRHLE
Sbjct: 303 EDSSSHAEADAFFCFVELLSGFRDFYCQQLDNSVVGIRSAITRLSQLVRKHDEELWRHLE 362

Query: 373 ITCKVNPQFYAFRWITLLLTQEFSFTDSLHIWDILLSDPEGPQETLLRVCCAMLILIRRR 432
           IT KVNPQFYAFRWITLLLTQEFSF DSLHIWD LLSDPEGP E+LL +CCAML+L+RRR
Sbjct: 363 ITTKVNPQFYAFRWITLLLTQEFSFFDSLHIWDALLSDPEGPLESLLGICCAMLVLVRRR 422

Query: 433 LLAGDFTSNLKLLQNYPSTNISHLLYV 452
           L+AGDFTSN+KLLQ+YP+TNISHLL +
Sbjct: 423 LIAGDFTSNMKLLQHYPTTNISHLLII 438

[Close]

BLAST of Spo01396.1 vs. TAIR (Arabidopsis)
Match: AT2G30710.1 (Ypt/Rab-GAP domain of gyp1p superfamily protein)

HSP 1 Score: 95.5 bits (236), Expect = 9.000e-20
Identity = 67/227 (29.52%), Postives = 108/227 (47.58%), Query Frame = 1

		  
Query: 233 DTEIIEQIDRDVKRTHPDMHFFSGDTVSAKLNQDALRNILIVFAKLNPGIRYVQGMNELL 292
           +  ++ QI  D  RT PD+ FF  + V     Q +L  IL  +A  +P   YVQG+N+L+
Sbjct: 197 EINMLRQIAVDCPRTVPDVSFFQQEQV-----QKSLERILYTWAIRHPASGYVQGINDLV 256

Query: 293 APLFYVF-------------RNDPDDENSAAAEADTFFCFVELLSGLRDNFCQQLDNSVV 352
            P   +F              +D   E  +  EAD ++C  +LL G++D++      +  
Sbjct: 257 TPFLVIFLSEYLDGGVDSWSMDDLSAEKVSDVEADCYWCLTKLLDGMQDHY----TFAQP 316

Query: 353 GIRSTITKLSLLLKEHDEELWRHLEITCKVNPQFYAFRWITLLLTQEFSFTDSLHIWDIL 412
           GI+  + KL  L++  DE + RH+E       QF AFRW   LL +E  F     +WD  
Sbjct: 317 GIQRLVFKLKELVRRIDEPVSRHMEEHGLEFLQF-AFRWYNCLLIREIPFNLINRLWDTY 376

Query: 413 LSDPEGPQETLLRVCCAMLILIRRRLLAGDFTSNLKLLQNYPSTNIS 447
           L++ +   + L+ +  + L+     L   DF   +  LQ+ P+ N S
Sbjct: 377 LAEGDALPDFLVYIYASFLLTWSDELKKLDFQEMVMFLQHLPTHNWS 413

[Close]

BLAST of Spo01396.1 vs. TAIR (Arabidopsis)
Match: AT4G28550.1 (Ypt/Rab-GAP domain of gyp1p superfamily protein)

HSP 1 Score: 94.4 bits (233), Expect = 2.000e-19
Identity = 80/288 (27.78%), Postives = 140/288 (48.61%), Query Frame = 1

		  
Query: 124 REIRRLASMGLPDAPVIRSTVWKLLL-AYLPSDRAMWPSELAK-KRSQYKHFKDDLL-MS 183
           R +RR+   G+   P I+  VW+ LL AY P       ++L   +R QY  +K++   M 
Sbjct: 61  RVLRRIQRGGIH--PSIKGEVWEFLLGAYDPDSTFEERNKLRNHRREQYYAWKEECKNMV 120

Query: 184 PSEISRKLEKSSLADKDELKGESRCVLSRSEIVQDEHPLSLGQSSLWNQFFQDTEIIEQI 243
           P   S K    ++  +D    E   V ++  +V+         +    +  Q   ++ QI
Sbjct: 121 PLVGSGKFVTMAVVAEDGQPLEESSVDNQEWVVKT--------AITDKRVLQWMLVLSQI 180

Query: 244 DRDVKRTHPDMHFFSGDTVSAKLNQDALRNILIVFAKLNPGIRYVQGMNELLAPLFYVFR 303
             DV RT   + F+  ++     NQ  L +IL ++  LNP I YVQGMN++ +P+  +  
Sbjct: 181 GLDVVRTDRYLCFYESES-----NQARLWDILSIYTWLNPDIGYVQGMNDICSPMIILLE 240

Query: 304 NDPDDENSAAAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEELW 363
           +          EAD F+CF   +  LR+NF  +   + +G+++ +  LS ++K  D  L 
Sbjct: 241 D----------EADAFWCFERAMRRLRENF--RTTATSMGVQTQLGMLSQVIKTVDPRLH 300

Query: 364 RHLEITCKVNPQFYAFRWITLLLTQEFSFTDSLHIWDILLSDPEGPQE 409
           +HLE         +A R + +L  +EFSF D+L++W+++ +    P +
Sbjct: 301 QHLE-DLDGGEYLFAIRMLMVLFRREFSFLDALYLWELMWAMEYNPNK 320

[Close]

BLAST of Spo01396.1 vs. TAIR (Arabidopsis)
Match: AT2G20440.1 (Ypt/Rab-GAP domain of gyp1p superfamily protein)

HSP 1 Score: 87.0 bits (214), Expect = 3.200e-17
Identity = 78/281 (27.76%), Postives = 132/281 (46.98%), Query Frame = 1

		  
Query: 126 IRRLASMGLPDAPVIRSTVWKLLLAYLPSDRAMWPSELAK--KRSQYKHFKDDLL-MSPS 185
           +RR+   G+   P I+  VW+ LL     D       + +  +R QY  +K++   M P 
Sbjct: 63  LRRIQRGGIH--PSIKGAVWEFLLGCYDPDSTFEERNILRNRRREQYGAWKEECKKMVPV 122

Query: 186 EISRKLEKSSLADKDELKGESRCVLSRSEIVQ----DEHPLSLGQSSLWNQFFQDTEIIE 245
             S K    ++  ++    +   V ++  IV+    DE  L    S            + 
Sbjct: 123 IGSGKYVTMAVVQENGNPIDESSVENQGWIVKNTVTDERVLQWMLS------------LH 182

Query: 246 QIDRDVKRTHPDMHFFSGDTVSAKLNQDALRNILIVFAKLNPGIRYVQGMNELLAPLFYV 305
           QI  DV RT   + F+  D      NQ  L ++L ++  LN  I YVQGMN++ +P+  +
Sbjct: 183 QIGLDVARTDRYLCFYENDR-----NQSKLWDVLAIYTWLNLDIGYVQGMNDICSPMIIL 242

Query: 306 FRNDPDDENSAAAEADTFFCFVELLSGLRDNFCQQLDNSVVGIRSTITKLSLLLKEHDEE 365
           F    DD      E D F+CF   +  LR+NF  +   + +G+++ +  LS ++K  D  
Sbjct: 243 F----DD------EGDAFWCFERAMRRLRENF--RATATSMGVQTQLGVLSQVIKTVDPR 302

Query: 366 LWRHLEITCKVNPQFYAFRWITLLLTQEFSFTDSLHIWDIL 400
           L +HLE         +A R + +L  +EFSF D+L++W+++
Sbjct: 303 LHQHLE-DLDGGEYLFAIRMLMVLFRREFSFLDALYLWELM 311

The following BLAST results are available for this feature:

BLAST of Spo01396.1 vs. NCBI nr
BLAST of Spo01396.1 vs. UniProtKB/TrEMBL
BLAST of Spo01396.1 vs. ExPASy Swiss-Prot
BLAST of Spo01396.1 vs. TAIR (Arabidopsis)

BLAST of Spo01396.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902230762\|gb\|KNA21984.1\|	3.9e-259	100.	hypothetical protein SOVF_0383...	[more]
gi\|731325261\|ref\|XP_010673420.1\|	2.3e-198	80.1	PREDICTED: TBC1 domain family ...	[more]
gi\|731325263\|ref\|XP_010673421.1\|	6.4e-193	78.1	PREDICTED: TBC1 domain family ...	[more]
gi\|645232547\|ref\|XP_008222917.1\|	1.3e-177	72.8	PREDICTED: TBC1 domain family ...	[more]
gi\|596171124\|ref\|XP_007223135.1\|	1.7e-177	72.7	hypothetical protein PRUPE_ppa...	[more]

BLAST of Spo01396.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9RST7_SPIOL	2.7e-259	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CSA7_BETVU	1.6e-198	80.1	Uncharacterized protein OS=Bet...	[more]
M5XEH4_PRUPE	1.2e-177	72.7	Uncharacterized protein OS=Pru...	[more]
W9RXZ6_9ROSA	1.5e-177	71.9	TBC1 domain family member 13 O...	[more]
D7SNI7_VITVI	4.5e-177	73.5	Putative uncharacterized prote...	[more]

BLAST of Spo01396.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
TBC13_HUMAN	2.5e-48	50.2	TBC1 domain family member 13 O...	[more]
TBC13_MOUSE	3.3e-48	50.7	TBC1 domain family member 13 O...	[more]
YLOH_SCHPO	1.4e-35	38.4	TBC domain-containing protein ...	[more]
TBCD5_HUMAN	2.6e-32	28.9	TBC1 domain family member 5 OS...	[more]
TBCD5_MOUSE	9.7e-32	29.3	TBC1 domain family member 5 OS...	[more]

BLAST of Spo01396.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
AT4G13730.1	8.1e-162	65.6	Ypt/Rab-GAP domain of gyp1p su...	[more]
AT1G04830.2	6.7e-156	62.8	Ypt/Rab-GAP domain of gyp1p su...	[more]
AT2G30710.1	9.0e-20	29.5	Ypt/Rab-GAP domain of gyp1p su...	[more]
AT4G28550.1	2.0e-19	27.7	Ypt/Rab-GAP domain of gyp1p su...	[more]
AT2G20440.1	3.2e-17	27.7	Ypt/Rab-GAP domain of gyp1p su...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000195	Rab-GTPase-TBC domain	PFAM	PF00566	RabGAP-TBC	coord: 232..425 score: 4.1
IPR000195	Rab-GTPase-TBC domain	SMART	SM00164	tbc_4	coord: 132..429 score: 3.4
IPR000195	Rab-GTPase-TBC domain	PROFILE	PS50086	TBC_RABGAP	coord: 135..403 score: 32
IPR000195	Rab-GTPase-TBC domain	unknown	SSF47923	Ypt/Rab-GAP domain of gyp1p	coord: 223..362 score: 1.23E-47coord: 113..174 score: 1.23E-47coord: 340..456 score: 2.88
None	No IPR available	GENE3D	1.10.8.270		coord: 224..323 score: 5.3E-26coord: 125..156 score: 5.3
None	No IPR available	PANTHER	PTHR22957	TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN	coord: 238..456 score: 3.8E-202coord: 12..183 score: 3.8E
None	No IPR available	PANTHER	PTHR22957:SF329	SUBFAMILY NOT NAMED	coord: 12..183 score: 3.8E-202coord: 238..456 score: 3.8E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043547	positive regulation of GTPase activity
molecular_function	GO:0005096	GTPase activator activity