Spo01599.1 (mRNA) | SpinachBase

Overview


Name	Spo01599.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Ring finger protein, putative
Location	chr2 : 50633912 .. 50634520 (+)
Sequence length	609

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGCCATTCCTCCACCTTCCTCTCACTCCTCTCACTTCACTTTCTCTCTCAAAAACCTTGGACTCGGCTACGCCATAGCCATCGCTTTTGGCTTCCTCGTCCTCTTCTCCGCCCTCCTCCTCTCTTCTTACATCTGCTGCCGCGCTAGCCGCCGTCGCCGCCTCCACGCTCCTCCCCTCCCTAACTCCTCCTTCGAAAACGGCATCATCGTTCCTCGTATAATCTTCGTTGCCGAAGACGACGACGACGAGGAAAACCAAAACAGAGCCTCAAACGGCGTCGTTGGCCTCGATCGTGCTGTCATTAACTCTTACCCTAAATTCCAATTCTTCAAGAAGAATCTAGAAAATAGTAACGGCGATAATCTCATGTGCTCAATTTGTTTGTGCGATTACAAAGAAGGTGAAATGTTAAGAATGATGCCGGATTGTAACCACTTTTTTCACCTGTGTTGTTTGGATGCGTGGCTTAAACTTAACGGTTCTTGCCCTGTTTGTCGAAATTCTCCGTTACCTACGCCTATTTCTACGCCGTTAGCGGAGGTTGTCCCCCTTTCTCAGTACCCTGATAATCGCCGCAGGTCTAATGTCGTTTCCTCCTCTTAA

mRNA sequence

ATGTCCGCCATTCCTCCACCTTCCTCTCACTCCTCTCACTTCACTTTCTCTCTCAAAAACCTTGGACTCGGCTACGCCATAGCCATCGCTTTTGGCTTCCTCGTCCTCTTCTCCGCCCTCCTCCTCTCTTCTTACATCTGCTGCCGCGCTAGCCGCCGTCGCCGCCTCCACGCTCCTCCCCTCCCTAACTCCTCCTTCGAAAACGGCATCATCGTTCCTCGTATAATCTTCGTTGCCGAAGACGACGACGACGAGGAAAACCAAAACAGAGCCTCAAACGGCGTCGTTGGCCTCGATCGTGCTGTCATTAACTCTTACCCTAAATTCCAATTCTTCAAGAAGAATCTAGAAAATAGTAACGGCGATAATCTCATGTGCTCAATTTGTTTGTGCGATTACAAAGAAGGTGAAATGTTAAGAATGATGCCGGATTGTAACCACTTTTTTCACCTGTGTTGTTTGGATGCGTGGCTTAAACTTAACGGTTCTTGCCCTGTTTGTCGAAATTCTCCGTTACCTACGCCTATTTCTACGCCGTTAGCGGAGGTTGTCCCCCTTTCTCAGTACCCTGATAATCGCCGCAGGTCTAATGTCGTTTCCTCCTCTTAA

Coding sequence (CDS)

ATGTCCGCCATTCCTCCACCTTCCTCTCACTCCTCTCACTTCACTTTCTCTCTCAAAAACCTTGGACTCGGCTACGCCATAGCCATCGCTTTTGGCTTCCTCGTCCTCTTCTCCGCCCTCCTCCTCTCTTCTTACATCTGCTGCCGCGCTAGCCGCCGTCGCCGCCTCCACGCTCCTCCCCTCCCTAACTCCTCCTTCGAAAACGGCATCATCGTTCCTCGTATAATCTTCGTTGCCGAAGACGACGACGACGAGGAAAACCAAAACAGAGCCTCAAACGGCGTCGTTGGCCTCGATCGTGCTGTCATTAACTCTTACCCTAAATTCCAATTCTTCAAGAAGAATCTAGAAAATAGTAACGGCGATAATCTCATGTGCTCAATTTGTTTGTGCGATTACAAAGAAGGTGAAATGTTAAGAATGATGCCGGATTGTAACCACTTTTTTCACCTGTGTTGTTTGGATGCGTGGCTTAAACTTAACGGTTCTTGCCCTGTTTGTCGAAATTCTCCGTTACCTACGCCTATTTCTACGCCGTTAGCGGAGGTTGTCCCCCTTTCTCAGTACCCTGATAATCGCCGCAGGTCTAATGTCGTTTCCTCCTCTTAA

Protein sequence

MSAIPPPSSHSSHFTFSLKNLGLGYAIAIAFGFLVLFSALLLSSYICCRASRRRRLHAPPLPNSSFENGIIVPRIIFVAEDDDDEENQNRASNGVVGLDRAVINSYPKFQFFKKNLENSNGDNLMCSICLCDYKEGEMLRMMPDCNHFFHLCCLDAWLKLNGSCPVCRNSPLPTPISTPLAEVVPLSQYPDNRRRSNVVSSS

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo01599	Spo01599	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo01599.1	Spo01599.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01599.1.exon.1	Spo01599.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01599.1.CDS.1	Spo01599.1.CDS.1	CDS

Homology

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BLAST of Spo01599.1 vs. NCBI nr
Match: gi|902223592|gb|KNA19499.1| (hypothetical protein SOVF_060400 [Spinacia oleracea])

HSP 1 Score: 418.3 bits (1074), Expect = 7.600e-114
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 1


		  
Query: 1   MSAIPPPSSHSSHFTFSLKNLGLGYAIAIAFGFLVLFSALLLSSYICCRASRRRRLHAPP 60
           MSAIPPPSSHSSHFTFSLKNLGLGYAIAIAFGFLVLFSALLLSSYICCRASRRRRLHAPP
Sbjct: 1   MSAIPPPSSHSSHFTFSLKNLGLGYAIAIAFGFLVLFSALLLSSYICCRASRRRRLHAPP 60

Query: 61  LPNSSFENGIIVPRIIFVAEDDDDEENQNRASNGVVGLDRAVINSYPKFQFFKKNLENSN 120
           LPNSSFENGIIVPRIIFVAEDDDDEENQNRASNGVVGLDRAVINSYPKFQFFKKNLENSN
Sbjct: 61  LPNSSFENGIIVPRIIFVAEDDDDEENQNRASNGVVGLDRAVINSYPKFQFFKKNLENSN 120

Query: 121 GDNLMCSICLCDYKEGEMLRMMPDCNHFFHLCCLDAWLKLNGSCPVCRNSPLPTPISTPL 180
           GDNLMCSICLCDYKEGEMLRMMPDCNHFFHLCCLDAWLKLNGSCPVCRNSPLPTPISTPL
Sbjct: 121 GDNLMCSICLCDYKEGEMLRMMPDCNHFFHLCCLDAWLKLNGSCPVCRNSPLPTPISTPL 180

Query: 181 AEVVPLSQYPDNRRRSNVVSSS 203
           AEVVPLSQYPDNRRRSNVVSSS
Sbjct: 181 AEVVPLSQYPDNRRRSNVVSSS 202

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BLAST of Spo01599.1 vs. NCBI nr
Match: gi|731311483|ref|XP_010669733.1| (PREDICTED: RING-H2 finger protein ATL67-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 335.9 bits (860), Expect = 4.900e-89
Identity = 175/211 (82.94%), Postives = 181/211 (85.78%), Query Frame = 1


		  
Query: 1   MSAIPPPSSHSSHFTFSLKNLGLGYAIAIAFGFLVLFSALLLSSYICCRASRRRRLHAPP 60
           MSAI PPSS   HFT SL+NLGLGYAIAI+ GFLVLFSALLLSSYICCRA+RRR      
Sbjct: 1   MSAISPPSS--PHFTLSLQNLGLGYAIAISLGFLVLFSALLLSSYICCRANRRRITRQHV 60

Query: 61  LPNSSFENGIIVPRIIFVAEDDD-DEENQNRASNGVVGLDRAVINSYPKFQFFKKNLEN- 120
             NS   N IIVPRIIFVAEDDD DEENQNRASNGVVGLDRAVINSYPKFQFFKKNLE+ 
Sbjct: 61  SDNS---NAIIVPRIIFVAEDDDNDEENQNRASNGVVGLDRAVINSYPKFQFFKKNLESK 120

Query: 121 -------SNGDNLMCSICLCDYKEGEMLRMMPDCNHFFHLCCLDAWLKLNGSCPVCRNSP 180
                  SNGDNLMCSICLCDYKEGEMLRMMPDC HFFHLCCLDAWLKLNGSCPVCRNSP
Sbjct: 121 DNNNNYYSNGDNLMCSICLCDYKEGEMLRMMPDCKHFFHLCCLDAWLKLNGSCPVCRNSP 180

Query: 181 LPTPISTPLAEVVPLSQYPDNRRRSNVVSSS 203
           LPTP+STPLAEVVPLSQY DNRRRS VVSS+
Sbjct: 181 LPTPVSTPLAEVVPLSQYADNRRRSTVVSSA 206

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BLAST of Spo01599.1 vs. NCBI nr
Match: gi|848887091|ref|XP_012843787.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105963853 [Erythranthe guttata])

HSP 1 Score: 256.1 bits (653), Expect = 5.000e-65
Identity = 130/207 (62.80%), Postives = 154/207 (74.40%), Query Frame = 1


		  
Query: 1   MSAIPPP------SSHSSHFTFSLKNLGLGYAIAIAFGFLVLFSALLLSSYICCRAS--- 60
           MS  PPP      ++ SS F+ +L ++GLGYAIAIA GFLVLFS +LL+SYICCR++   
Sbjct: 1   MSTAPPPPPLAAAAAKSSSFSQNLNSIGLGYAIAIALGFLVLFSTILLASYICCRSAASR 60

Query: 61  RRRRLHAPPLPNSSFENGIIVPRIIFVAEDDDDEENQNRASNGVVGLDRAVINSYPKFQF 120
           RRRR +    PN S EN I +PRIIFVAEDDD     N + N VVGLD A INSYPKF F
Sbjct: 61  RRRRDNRDRNPNHSNENSIYLPRIIFVAEDDD-----NDSQNAVVGLDEAAINSYPKFVF 120

Query: 121 FKKNLENSNGDNLMCSICLCDYKEGEMLRMMPDCNHFFHLCCLDAWLKLNGSCPVCRNSP 180
            K+N  +  G + +CSICLC+Y+E EMLRM+PDC H+FH+ C+DAWLKLN SCPVCRNSP
Sbjct: 121 GKRNGISGGGGDAVCSICLCEYRESEMLRMLPDCRHYFHVMCVDAWLKLNASCPVCRNSP 180

Query: 181 LPTPISTPLAEVVPLSQYPDNRRRSNV 199
           LPTP+STPL EVVPLSQY D RRR  V
Sbjct: 181 LPTPLSTPLQEVVPLSQYTDGRRRQXV 202

[Close]

BLAST of Spo01599.1 vs. NCBI nr
Match: gi|604321603|gb|EYU32179.1| (hypothetical protein MIMGU_mgv1a014108mg [Erythranthe guttata])

HSP 1 Score: 255.0 bits (650), Expect = 1.100e-64
Identity = 129/204 (63.24%), Postives = 153/204 (75.00%), Query Frame = 1


		  
Query: 1   MSAIPPP------SSHSSHFTFSLKNLGLGYAIAIAFGFLVLFSALLLSSYICCRAS--- 60
           MS  PPP      ++ SS F+ +L ++GLGYAIAIA GFLVLFS +LL+SYICCR++   
Sbjct: 1   MSTAPPPPPLAAAAAKSSSFSQNLNSIGLGYAIAIALGFLVLFSTILLASYICCRSAASR 60

Query: 61  RRRRLHAPPLPNSSFENGIIVPRIIFVAEDDDDEENQNRASNGVVGLDRAVINSYPKFQF 120
           RRRR +    PN S EN I +PRIIFVAEDDD     N + N VVGLD A INSYPKF F
Sbjct: 61  RRRRDNRDRNPNHSNENSIYLPRIIFVAEDDD-----NDSQNAVVGLDEAAINSYPKFVF 120

Query: 121 FKKNLENSNGDNLMCSICLCDYKEGEMLRMMPDCNHFFHLCCLDAWLKLNGSCPVCRNSP 180
            K+N  +  G + +CSICLC+Y+E EMLRM+PDC H+FH+ C+DAWLKLN SCPVCRNSP
Sbjct: 121 GKRNGISGGGGDAVCSICLCEYRESEMLRMLPDCRHYFHVMCVDAWLKLNASCPVCRNSP 180

Query: 181 LPTPISTPLAEVVPLSQYPDNRRR 196
           LPTP+STPL EVVPLSQY D RRR
Sbjct: 181 LPTPLSTPLQEVVPLSQYTDGRRR 199

[Close]

BLAST of Spo01599.1 vs. NCBI nr
Match: gi|719986120|ref|XP_010251603.1| (PREDICTED: RING-H2 finger protein ATL67 [Nelumbo nucifera])

HSP 1 Score: 253.8 bits (647), Expect = 2.500e-64
Identity = 125/188 (66.49%), Postives = 149/188 (79.26%), Query Frame = 1


		  
Query: 13  HFTFSLKNLGLGYAIAIAFGFLVLFSALLLSSYICCRASRRRRLHAPPL-----PNSSFE 72
           +F  +L N+GLGYAIAIA GFLVL S +LL+SY+CCR+SR R   + P      P+SS  
Sbjct: 30  YFLQNLSNIGLGYAIAIALGFLVLLSTVLLASYVCCRSSRNRSRSSDPENPGSNPDSSHS 89

Query: 73  NGIIVPRIIFVAEDDDDEENQNRASNGVVGLDRAVINSYPKFQFFKKNLENSNGDNLMCS 132
           NGII+PRIIFVAEDDDD+   + +   VVGL++AVINSYPKF F K       GD++ CS
Sbjct: 90  NGIILPRIIFVAEDDDDDSRDDDSL--VVGLNQAVINSYPKFPFCKSK---DRGDSV-CS 149

Query: 133 ICLCDYKEGEMLRMMPDCNHFFHLCCLDAWLKLNGSCPVCRNSPLPTPISTPLAEVVPLS 192
           ICLCDYK+GEMLRMMPDC+HFFHLCC+DAWL+LN SCPVCRNSP PTP+STPL+E+VPLS
Sbjct: 150 ICLCDYKDGEMLRMMPDCHHFFHLCCIDAWLRLNASCPVCRNSPFPTPLSTPLSELVPLS 209

Query: 193 QYPDNRRR 196
           QYP NRRR
Sbjct: 210 QYPGNRRR 211

[Close]

BLAST of Spo01599.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RKP9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_060400 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 5.300e-114
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 1


		  
Query: 1   MSAIPPPSSHSSHFTFSLKNLGLGYAIAIAFGFLVLFSALLLSSYICCRASRRRRLHAPP 60
           MSAIPPPSSHSSHFTFSLKNLGLGYAIAIAFGFLVLFSALLLSSYICCRASRRRRLHAPP
Sbjct: 1   MSAIPPPSSHSSHFTFSLKNLGLGYAIAIAFGFLVLFSALLLSSYICCRASRRRRLHAPP 60

Query: 61  LPNSSFENGIIVPRIIFVAEDDDDEENQNRASNGVVGLDRAVINSYPKFQFFKKNLENSN 120
           LPNSSFENGIIVPRIIFVAEDDDDEENQNRASNGVVGLDRAVINSYPKFQFFKKNLENSN
Sbjct: 61  LPNSSFENGIIVPRIIFVAEDDDDEENQNRASNGVVGLDRAVINSYPKFQFFKKNLENSN 120

Query: 121 GDNLMCSICLCDYKEGEMLRMMPDCNHFFHLCCLDAWLKLNGSCPVCRNSPLPTPISTPL 180
           GDNLMCSICLCDYKEGEMLRMMPDCNHFFHLCCLDAWLKLNGSCPVCRNSPLPTPISTPL
Sbjct: 121 GDNLMCSICLCDYKEGEMLRMMPDCNHFFHLCCLDAWLKLNGSCPVCRNSPLPTPISTPL 180

Query: 181 AEVVPLSQYPDNRRRSNVVSSS 203
           AEVVPLSQYPDNRRRSNVVSSS
Sbjct: 181 AEVVPLSQYPDNRRRSNVVSSS 202

[Close]

BLAST of Spo01599.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D7P7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g003920 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 3.400e-89
Identity = 175/211 (82.94%), Postives = 181/211 (85.78%), Query Frame = 1


		  
Query: 1   MSAIPPPSSHSSHFTFSLKNLGLGYAIAIAFGFLVLFSALLLSSYICCRASRRRRLHAPP 60
           MSAI PPSS   HFT SL+NLGLGYAIAI+ GFLVLFSALLLSSYICCRA+RRR      
Sbjct: 1   MSAISPPSS--PHFTLSLQNLGLGYAIAISLGFLVLFSALLLSSYICCRANRRRITRQHV 60

Query: 61  LPNSSFENGIIVPRIIFVAEDDD-DEENQNRASNGVVGLDRAVINSYPKFQFFKKNLEN- 120
             NS   N IIVPRIIFVAEDDD DEENQNRASNGVVGLDRAVINSYPKFQFFKKNLE+ 
Sbjct: 61  SDNS---NAIIVPRIIFVAEDDDNDEENQNRASNGVVGLDRAVINSYPKFQFFKKNLESK 120

Query: 121 -------SNGDNLMCSICLCDYKEGEMLRMMPDCNHFFHLCCLDAWLKLNGSCPVCRNSP 180
                  SNGDNLMCSICLCDYKEGEMLRMMPDC HFFHLCCLDAWLKLNGSCPVCRNSP
Sbjct: 121 DNNNNYYSNGDNLMCSICLCDYKEGEMLRMMPDCKHFFHLCCLDAWLKLNGSCPVCRNSP 180

Query: 181 LPTPISTPLAEVVPLSQYPDNRRRSNVVSSS 203
           LPTP+STPLAEVVPLSQY DNRRRS VVSS+
Sbjct: 181 LPTPVSTPLAEVVPLSQYADNRRRSTVVSSA 206

[Close]

BLAST of Spo01599.1 vs. UniProtKB/TrEMBL
Match: A0A022QX48_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014108mg PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 7.700e-65
Identity = 129/204 (63.24%), Postives = 153/204 (75.00%), Query Frame = 1


		  
Query: 1   MSAIPPP------SSHSSHFTFSLKNLGLGYAIAIAFGFLVLFSALLLSSYICCRAS--- 60
           MS  PPP      ++ SS F+ +L ++GLGYAIAIA GFLVLFS +LL+SYICCR++   
Sbjct: 1   MSTAPPPPPLAAAAAKSSSFSQNLNSIGLGYAIAIALGFLVLFSTILLASYICCRSAASR 60

Query: 61  RRRRLHAPPLPNSSFENGIIVPRIIFVAEDDDDEENQNRASNGVVGLDRAVINSYPKFQF 120
           RRRR +    PN S EN I +PRIIFVAEDDD     N + N VVGLD A INSYPKF F
Sbjct: 61  RRRRDNRDRNPNHSNENSIYLPRIIFVAEDDD-----NDSQNAVVGLDEAAINSYPKFVF 120

Query: 121 FKKNLENSNGDNLMCSICLCDYKEGEMLRMMPDCNHFFHLCCLDAWLKLNGSCPVCRNSP 180
            K+N  +  G + +CSICLC+Y+E EMLRM+PDC H+FH+ C+DAWLKLN SCPVCRNSP
Sbjct: 121 GKRNGISGGGGDAVCSICLCEYRESEMLRMLPDCRHYFHVMCVDAWLKLNASCPVCRNSP 180

Query: 181 LPTPISTPLAEVVPLSQYPDNRRR 196
           LPTP+STPL EVVPLSQY D RRR
Sbjct: 181 LPTPLSTPLQEVVPLSQYTDGRRR 199

[Close]

BLAST of Spo01599.1 vs. UniProtKB/TrEMBL
Match: A0A0A0L7B6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G121045 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 5.500e-63
Identity = 124/188 (65.96%), Postives = 148/188 (78.72%), Query Frame = 1


		  
Query: 8   SSHSSHFTFSLKNLGLGYAIAIAFGFLVLFSALLLSSYICCRASRRRRLHAPPLPNSSFE 67
           SS SS ++FS   +GLGY+IAIA  FLVL SALLL+ Y+CCRASR R L  PP P+S  +
Sbjct: 2   SSPSSTYSFS--RIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPPSSRSD 61

Query: 68  NGIIVPRIIFVAEDDDDEENQNRASNGVVGLDRAVINSYPKFQFFKKNLENSNGDNLMCS 127
            GII+P+IIFVAEDD   +  +   NGVVGLD+ VINSYPKF F +   ++  G N +CS
Sbjct: 62  AGIILPQIIFVAEDDAAPDRDD--DNGVVGLDQTVINSYPKFPFSRD--KSMAGANCVCS 121

Query: 128 ICLCDYKEGEMLRMMPDCNHFFHLCCLDAWLKLNGSCPVCRNSPLPTPISTPLAEVVPLS 187
           ICLC+YK+ EMLRMMP+C H+FHLCC+DAWLKLNGSCPVCRNSPLPTP+STPL EVVPLS
Sbjct: 122 ICLCEYKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLS 181

Query: 188 QYPDNRRR 196
           QY  +RRR
Sbjct: 182 QYMADRRR 183

[Close]

BLAST of Spo01599.1 vs. UniProtKB/TrEMBL
Match: M0ZGB5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400000070 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 7.200e-63
Identity = 123/196 (62.76%), Postives = 153/196 (78.06%), Query Frame = 1


		  
Query: 5   PPPSSHSSHFTFSLKNLGLGYAIAIAFGFLVLFSALLLSSYICCR--ASRRRRLHAPPL- 64
           PP S+++   + +L  +GLGYAIAIA GFLVL S +LL+SYICCR  A+RRRR  A    
Sbjct: 67  PPDSTYT--LSQNLSTIGLGYAIAIALGFLVLLSTVLLASYICCRSAAARRRRRQARANS 126

Query: 65  --PNSSFENGIIVPRIIFVAEDDDDEENQNRASNGVVGLDRAVINSYPKFQFFKKNLENS 124
             PN++ ENGI +PRIIFVAEDD+ E +   + N  +GLD+ VINSYPK  + K+N  + 
Sbjct: 127 RNPNNNIENGIYLPRIIFVAEDDE-ENDDGLSQNATLGLDQVVINSYPKLIYSKRNGGSG 186

Query: 125 NGDNLMCSICLCDYKEGEMLRMMPDCNHFFHLCCLDAWLKLNGSCPVCRNSPLPTPISTP 184
           NG++++C ICLC+YK+GEMLRMMPDC H+FH+ CLDAWLKLN SCPVCRNSPLPTP+STP
Sbjct: 187 NGNDVVCPICLCEYKDGEMLRMMPDCKHYFHVMCLDAWLKLNASCPVCRNSPLPTPLSTP 246

Query: 185 LAEVVPLSQYPDNRRR 196
           L+EVVPLSQY D RRR
Sbjct: 247 LSEVVPLSQYSDGRRR 259

[Close]

BLAST of Spo01599.1 vs. ExPASy Swiss-Prot
Match: ATL67_ARATH (RING-H2 finger protein ATL67 OS=Arabidopsis thaliana GN=ATL67 PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.500e-58
Identity = 120/201 (59.70%), Postives = 143/201 (71.14%), Query Frame = 1


		  
Query: 5   PPPSSHSSHFTFSLKNLGLGYAIAIAFGFLVLFSALLLSSYICCRASRRRRLHAPPLPNS 64
           PP + + S+ T     LG GY+IAIA GFLVL S +LLSSYICCR SRRR        + 
Sbjct: 21  PPQAGNHSYLT----TLGFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDR 80

Query: 65  SFENGIIVPRIIFVAEDDDDEENQNRASNGVVGLDRAVINSYPKFQFFKKNLENSN---- 124
                +I+PRIIFVAE+D+++     A + VVGLD+AVINSYPKF F K     S+    
Sbjct: 81  G--GSVILPRIIFVAEEDNED---LEAGDVVVGLDQAVINSYPKFHFSKDTSAASSDGFG 140

Query: 125 -GDNLMCSICLCDYKEGEMLRMMPDCNHFFHLCCLDAWLKLNGSCPVCRNSPLP----TP 184
            G +  CSICLC+YKE EMLRMMP+C H+FHLCCLDAWLKLNGSCPVCRNSPLP    TP
Sbjct: 141 GGGDTTCSICLCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTP 200

Query: 185 ISTPLAEVVPLSQYPDNRRRS 197
           +STPL+EVVPLSQY  +RRR+
Sbjct: 201 LSTPLSEVVPLSQYAADRRRA 212

[Close]

BLAST of Spo01599.1 vs. ExPASy Swiss-Prot
Match: ATL68_ARATH (RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.900e-56
Identity = 127/208 (61.06%), Postives = 144/208 (69.23%), Query Frame = 1


		  
Query: 5   PPPSSHSSHFTFSLKNLGLGYAIAIAFGFLVLFSALLLSSYICCRASRRR--RLHAPPLP 64
           PPP    ++ T    +LGLGY+IAIA GFLVL S ++LSSYICCRASR R     A    
Sbjct: 12  PPPVPIPTYIT----SLGLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANA 71

Query: 65  NSSF-ENGIIVPRIIFVAEDDDDEENQNRASNGVVG-LDRAVINSYPKFQFFKKNLENSN 124
           N+SF + G+IVPRIIFVAEDDD E     + N VVG LD +VINSYPKF F K      N
Sbjct: 72  NASFSDRGVIVPRIIFVAEDDDLE-----SGNVVVGGLDHSVINSYPKFHFTKDITAVVN 131

Query: 125 GDNL--------MCSICLCDYKEGEMLRMMPDCNHFFHLCCLDAWLKLNGSCPVCRNSPL 184
           GD           CSICLC+Y E EMLRMMP+C H+FH+ CLDAWLKLNGSCPVCRNSPL
Sbjct: 132 GDGFHDGEGRETTCSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPL 191

Query: 185 P----TPISTPLAEVVPLSQYPDNRRRS 197
           P    TP STPL+EVVPLSQY  +RRRS
Sbjct: 192 PTPQSTPQSTPLSEVVPLSQYAADRRRS 210

[Close]

BLAST of Spo01599.1 vs. ExPASy Swiss-Prot
Match: ATL71_ARATH (Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana GN=ATL71 PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.700e-28
Identity = 73/196 (37.24%), Postives = 108/196 (55.10%), Query Frame = 1


		  
Query: 2   SAIPPPSSHSSHFTFSLKNLGLGYAIAIAFGFLVLFSALLLSSYICCRASRRRRLHAPPL 61
           + +PP S H    T + +  GL Y I ++ G L+L + + L+SY C R+         P 
Sbjct: 4   TVVPPYSGH--WLTNTDRMGGLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPR 63

Query: 62  PN--SSFENGIIVP-RIIFVAEDDDDEENQNRASNGVVGLDRAVINSYPKFQFFKK---- 121
                   NG + P +  F  EDD+ +         V+GL   VI  +PK  + +     
Sbjct: 64  TRRRQRESNGTLPPGQERFDFEDDESDT----VVVEVLGLTEEVIKGFPKLPYEEARVSY 123

Query: 122 NLENSNGDNLMCSICLCDYKEGEMLRMMPDCNHFFHLCCLDAWLKLNGSCPVCRNSPLPT 181
           +L+  +     CSICL DYK+ +M+R++PDCNH FH  C+D WL+L+ +CPVCR SPLP+
Sbjct: 124 SLQKESSTTSCCSICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPS 183

Query: 182 PISTPLAEVVPLSQYP 191
           P  TP+A+VVP S+ P
Sbjct: 184 PAMTPVADVVPFSRRP 193

[Close]

BLAST of Spo01599.1 vs. ExPASy Swiss-Prot
Match: ATL70_ARATH (RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.400e-27
Identity = 72/186 (38.71%), Postives = 97/186 (52.15%), Query Frame = 1


		  
Query: 5   PPPSSHSSHFTFSLKNLGLG---YAIAIAFGFLVLFSALLLSSYICCRASRRRRLHAPPL 64
           PPP S    +   L    +G   Y I ++ G L+L + + L+SY C     R +L + P 
Sbjct: 43  PPPPSEMPDYNGLLGTDDIGGFRYGIGVSIGVLLLITTITLTSYYC----TRNQLSSSPS 102

Query: 65  PNSSFENGIIVPRIIFVAEDDDDEENQNRASNGVVGLDRAVINSYPKFQFFKKNLENSNG 124
             +     I                + +   + V GLD   I SYPK  + +     +  
Sbjct: 103 QTNQDSTRI-------------HHHHHHVIIDVVPGLDEDTIQSYPKILYSEAKGPTTAS 162

Query: 125 DNLMCSICLCDYKEGEMLRMMPDCNHFFHLCCLDAWLKLNGSCPVCRNSPLPTPISTPLA 184
               C+ICL DYK   +LR +PDCNH FHL C+D WL+LN +CPVCR SPLPTP+STPLA
Sbjct: 163 ---CCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNPTCPVCRTSPLPTPLSTPLA 208

Query: 185 EVVPLS 188
           EVVPL+
Sbjct: 223 EVVPLA 208

[Close]

BLAST of Spo01599.1 vs. ExPASy Swiss-Prot
Match: ATL69_ARATH (Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana GN=ATL69 PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.100e-27
Identity = 74/188 (39.36%), Postives = 102/188 (54.26%), Query Frame = 1


		  
Query: 1   MSAIPPPSSHSSHFTFSLKNLGLGYAIAIAFGFLVLFSALLLSSYICCRASRRRRLHAPP 60
           MS I PP+S           +GLGY IAIA   LVL S ++L+SYIC R+    R  A  
Sbjct: 1   MSPISPPAS----------GVGLGYGIAIAVSILVLISFIMLASYICIRSKSTGRDEAT- 60

Query: 61  LPNSSFENGIIVPRIIFVAEDDDDEENQNRASNGVVGLDRAVINSYPKFQFF-KKNLENS 120
                                D   +  + A+   +GLDR VI SYP+      + L   
Sbjct: 61  --------------------SDVVLDLPSPAAEVKLGLDRPVIESYPRIVLGDSRRLPRP 120

Query: 121 NGDNLMCSICLCDYKEGEMLRMMPDCNHFFHLCCLDAWLKLNGSCPVCRNSPLPTPISTP 180
           N  N  CSICLCDY+  E +R +P+CNH FH  C+D WL+ + +CP+CRNSP P+ ++TP
Sbjct: 121 N--NGPCSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRTSATCPLCRNSPAPSRLATP 155

Query: 181 LAEVVPLS 188
           L+++VPL+
Sbjct: 181 LSDLVPLA 155

[Close]

BLAST of Spo01599.1 vs. TAIR (Arabidopsis)
Match: AT2G46160.1 (RING/U-box superfamily protein)

HSP 1 Score: 225.7 bits (574), Expect = 2.500e-59
Identity = 120/201 (59.70%), Postives = 143/201 (71.14%), Query Frame = 1


		  
Query: 5   PPPSSHSSHFTFSLKNLGLGYAIAIAFGFLVLFSALLLSSYICCRASRRRRLHAPPLPNS 64
           PP + + S+ T     LG GY+IAIA GFLVL S +LLSSYICCR SRRR        + 
Sbjct: 21  PPQAGNHSYLT----TLGFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDR 80

Query: 65  SFENGIIVPRIIFVAEDDDDEENQNRASNGVVGLDRAVINSYPKFQFFKKNLENSN---- 124
                +I+PRIIFVAE+D+++     A + VVGLD+AVINSYPKF F K     S+    
Sbjct: 81  G--GSVILPRIIFVAEEDNED---LEAGDVVVGLDQAVINSYPKFHFSKDTSAASSDGFG 140

Query: 125 -GDNLMCSICLCDYKEGEMLRMMPDCNHFFHLCCLDAWLKLNGSCPVCRNSPLP----TP 184
            G +  CSICLC+YKE EMLRMMP+C H+FHLCCLDAWLKLNGSCPVCRNSPLP    TP
Sbjct: 141 GGGDTTCSICLCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTP 200

Query: 185 ISTPLAEVVPLSQYPDNRRRS 197
           +STPL+EVVPLSQY  +RRR+
Sbjct: 201 LSTPLSEVVPLSQYAADRRRA 212

[Close]

BLAST of Spo01599.1 vs. TAIR (Arabidopsis)
Match: AT3G61550.1 (RING/U-box superfamily protein)

HSP 1 Score: 220.3 bits (560), Expect = 1.100e-57
Identity = 127/208 (61.06%), Postives = 144/208 (69.23%), Query Frame = 1


		  
Query: 5   PPPSSHSSHFTFSLKNLGLGYAIAIAFGFLVLFSALLLSSYICCRASRRR--RLHAPPLP 64
           PPP    ++ T    +LGLGY+IAIA GFLVL S ++LSSYICCRASR R     A    
Sbjct: 12  PPPVPIPTYIT----SLGLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANA 71

Query: 65  NSSF-ENGIIVPRIIFVAEDDDDEENQNRASNGVVG-LDRAVINSYPKFQFFKKNLENSN 124
           N+SF + G+IVPRIIFVAEDDD E     + N VVG LD +VINSYPKF F K      N
Sbjct: 72  NASFSDRGVIVPRIIFVAEDDDLE-----SGNVVVGGLDHSVINSYPKFHFTKDITAVVN 131

Query: 125 GDNL--------MCSICLCDYKEGEMLRMMPDCNHFFHLCCLDAWLKLNGSCPVCRNSPL 184
           GD           CSICLC+Y E EMLRMMP+C H+FH+ CLDAWLKLNGSCPVCRNSPL
Sbjct: 132 GDGFHDGEGRETTCSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPL 191

Query: 185 P----TPISTPLAEVVPLSQYPDNRRRS 197
           P    TP STPL+EVVPLSQY  +RRRS
Sbjct: 192 PTPQSTPQSTPLSEVVPLSQYAADRRRS 210

[Close]

BLAST of Spo01599.1 vs. TAIR (Arabidopsis)
Match: AT5G06490.1 (RING/U-box superfamily protein)

HSP 1 Score: 127.5 bits (319), Expect = 9.400e-30
Identity = 73/196 (37.24%), Postives = 108/196 (55.10%), Query Frame = 1


		  
Query: 2   SAIPPPSSHSSHFTFSLKNLGLGYAIAIAFGFLVLFSALLLSSYICCRASRRRRLHAPPL 61
           + +PP S H    T + +  GL Y I ++ G L+L + + L+SY C R+         P 
Sbjct: 4   TVVPPYSGH--WLTNTDRMGGLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPR 63

Query: 62  PN--SSFENGIIVP-RIIFVAEDDDDEENQNRASNGVVGLDRAVINSYPKFQFFKK---- 121
                   NG + P +  F  EDD+ +         V+GL   VI  +PK  + +     
Sbjct: 64  TRRRQRESNGTLPPGQERFDFEDDESDT----VVVEVLGLTEEVIKGFPKLPYEEARVSY 123

Query: 122 NLENSNGDNLMCSICLCDYKEGEMLRMMPDCNHFFHLCCLDAWLKLNGSCPVCRNSPLPT 181
           +L+  +     CSICL DYK+ +M+R++PDCNH FH  C+D WL+L+ +CPVCR SPLP+
Sbjct: 124 SLQKESSTTSCCSICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPS 183

Query: 182 PISTPLAEVVPLSQYP 191
           P  TP+A+VVP S+ P
Sbjct: 184 PAMTPVADVVPFSRRP 193

[Close]

BLAST of Spo01599.1 vs. TAIR (Arabidopsis)
Match: AT2G35910.1 (RING/U-box superfamily protein)

HSP 1 Score: 124.4 bits (311), Expect = 8.000e-29
Identity = 72/186 (38.71%), Postives = 97/186 (52.15%), Query Frame = 1


		  
Query: 5   PPPSSHSSHFTFSLKNLGLG---YAIAIAFGFLVLFSALLLSSYICCRASRRRRLHAPPL 64
           PPP S    +   L    +G   Y I ++ G L+L + + L+SY C     R +L + P 
Sbjct: 43  PPPPSEMPDYNGLLGTDDIGGFRYGIGVSIGVLLLITTITLTSYYC----TRNQLSSSPS 102

Query: 65  PNSSFENGIIVPRIIFVAEDDDDEENQNRASNGVVGLDRAVINSYPKFQFFKKNLENSNG 124
             +     I                + +   + V GLD   I SYPK  + +     +  
Sbjct: 103 QTNQDSTRI-------------HHHHHHVIIDVVPGLDEDTIQSYPKILYSEAKGPTTAS 162

Query: 125 DNLMCSICLCDYKEGEMLRMMPDCNHFFHLCCLDAWLKLNGSCPVCRNSPLPTPISTPLA 184
               C+ICL DYK   +LR +PDCNH FHL C+D WL+LN +CPVCR SPLPTP+STPLA
Sbjct: 163 ---CCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNPTCPVCRTSPLPTPLSTPLA 208

Query: 185 EVVPLS 188
           EVVPL+
Sbjct: 223 EVVPLA 208

[Close]

BLAST of Spo01599.1 vs. TAIR (Arabidopsis)
Match: AT5G07040.1 (RING/U-box superfamily protein)

HSP 1 Score: 122.9 bits (307), Expect = 2.300e-28
Identity = 74/188 (39.36%), Postives = 102/188 (54.26%), Query Frame = 1


		  
Query: 1   MSAIPPPSSHSSHFTFSLKNLGLGYAIAIAFGFLVLFSALLLSSYICCRASRRRRLHAPP 60
           MS I PP+S           +GLGY IAIA   LVL S ++L+SYIC R+    R  A  
Sbjct: 1   MSPISPPAS----------GVGLGYGIAIAVSILVLISFIMLASYICIRSKSTGRDEAT- 60

Query: 61  LPNSSFENGIIVPRIIFVAEDDDDEENQNRASNGVVGLDRAVINSYPKFQFF-KKNLENS 120
                                D   +  + A+   +GLDR VI SYP+      + L   
Sbjct: 61  --------------------SDVVLDLPSPAAEVKLGLDRPVIESYPRIVLGDSRRLPRP 120

Query: 121 NGDNLMCSICLCDYKEGEMLRMMPDCNHFFHLCCLDAWLKLNGSCPVCRNSPLPTPISTP 180
           N  N  CSICLCDY+  E +R +P+CNH FH  C+D WL+ + +CP+CRNSP P+ ++TP
Sbjct: 121 N--NGPCSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRTSATCPLCRNSPAPSRLATP 155

Query: 181 LAEVVPLS 188
           L+++VPL+
Sbjct: 181 LSDLVPLA 155

The following BLAST results are available for this feature:

BLAST of Spo01599.1 vs. NCBI nr
BLAST of Spo01599.1 vs. UniProtKB/TrEMBL
BLAST of Spo01599.1 vs. ExPASy Swiss-Prot
BLAST of Spo01599.1 vs. TAIR (Arabidopsis)

BLAST of Spo01599.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902223592\|gb\|KNA19499.1\|	7.6e-114	100.	hypothetical protein SOVF_0604...	[more]
gi\|731311483\|ref\|XP_010669733.1\|	4.9e-89	82.9	PREDICTED: RING-H2 finger prot...	[more]
gi\|848887091\|ref\|XP_012843787.1\|	5.0e-65	62.8	PREDICTED: LOW QUALITY PROTEIN...	[more]
gi\|604321603\|gb\|EYU32179.1\|	1.1e-64	63.2	hypothetical protein MIMGU_mgv...	[more]
gi\|719986120\|ref\|XP_010251603.1\|	2.5e-64	66.4	PREDICTED: RING-H2 finger prot...	[more]

BLAST of Spo01599.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RKP9_SPIOL	5.3e-114	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8D7P7_BETVU	3.4e-89	82.9	Uncharacterized protein OS=Bet...	[more]
A0A022QX48_ERYGU	7.7e-65	63.2	Uncharacterized protein OS=Ery...	[more]
A0A0A0L7B6_CUCSA	5.5e-63	65.9	Uncharacterized protein OS=Cuc...	[more]
M0ZGB5_SOLTU	7.2e-63	62.7	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo01599.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
ATL67_ARATH	4.5e-58	59.7	RING-H2 finger protein ATL67 O...	[more]
ATL68_ARATH	1.9e-56	61.0	RING-H2 finger protein ATL68 O...	[more]
ATL71_ARATH	1.7e-28	37.2	Putative RING-H2 finger protei...	[more]
ATL70_ARATH	1.4e-27	38.7	RING-H2 finger protein ATL70 O...	[more]
ATL69_ARATH	4.1e-27	39.3	Putative RING-H2 finger protei...	[more]

BLAST of Spo01599.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT2G46160.1	2.5e-59	59.7	RING/U-box superfamily protein	[more]
AT3G61550.1	1.1e-57	61.0	RING/U-box superfamily protein	[more]
AT5G06490.1	9.4e-30	37.2	RING/U-box superfamily protein	[more]
AT2G35910.1	8.0e-29	38.7	RING/U-box superfamily protein	[more]
AT5G07040.1	2.3e-28	39.3	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 125..168 score: 1.2
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 126..167 score: 2.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 126..168 score: 11
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 122..169 score: 2.8
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 1..60 score: 1.4E-93coord: 78..193 score: 1.4
None	No IPR available	PANTHER	PTHR14155:SF71	RING-H2 FINGER PROTEIN ATL67-RELATED	coord: 1..60 score: 1.4E-93coord: 78..193 score: 1.4
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 116..173 score: 6.25

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding