Spo01673.1 (mRNA)

Overview
NameSpo01673.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
Descriptionzinc ion binding;nucleic acid binding
Locationchr2 : 50196311 .. 50198440 (-)
Sequence length2130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATTCAGTCTCCAACGGAACCGCCCGATAAGATGATGGCTGATGTCCCACCCGTTGGAATTTCACCAGAGTTGCCTAGGGAGATGCCTTCCTTCAGGGAGGTGGTTGCTTCGTCGACGCAGTGGTTTACGGAGGCGAGGAAAATTGTAACGGCATCGAAGGAATGGGAGGATTGTGAGGAGCTTCCACCAGATAGCAACTTGTCAGTGCAATTCAGTAAACTTACTTTGGATCGGTTACGAAGCCCATGGAGACTTACTCTCATGGGAAAGTGCTTGGGAATCCAAGTACGATCGAGTATTATGGAGGCTAGAGTTCGTGCTATGTGGAGAATTAAAGGTTTAGTGGAGGTGATTGATGTTGGTAGTGGAGTTTTTTTGTTTAAATTTACTCAAGGGGATGATTATGAACGCGCTCTGTTTGGAGGTCCTTGGTTTGTGATGGAGCATTATCTCATGTTATCACCGTGGAAGCCAAATTTTCGGCCGTCAAGGGACGGATTTGATCAAATGTCTGTGTGGATTAGGATTGAGGAGTTACCAATTGAGTATTATGATAAGGAGGCTCTGTTTGCCATTGCCTTGGTGATTGGTAAACCAATTCGTGTTGATTATTCAACGGATAAGATTACTCGGGGTCGTTATGCTAGGGTTTGTGTGGAGATTGATCTCACTAAGCCTTTAATCTCTAAGGTTTGGGTTGGGGGATCATGGCAAGCAATTCAATACGAAAATATTTCTTCTCTGTGTTTTGCGTGTGGAAGGATAGGACATCTGCAGACGGAGTGTTCCGTGGAAAAGTTGGTTTCCTCTTCTGTTAAGGGGAAGGAGAAAATGAATCAGGACGGCGCGTGTGGGGGACAAGAGGCGGTGGTTATCCGAAACGTTGATGCAAACGGTGATCCCTATGCCACTGGAATGGAAGGTTCTGGGACTAAGGTTGACTTTACAAGTCATGATTATGGGCCATGGACTTTGGTGAGTCGTAAGCCCAAGCCACGTGGTCGATTTGGTAATAAAATCACCCCACATTCGAAGATCAATGAGTACAGAAGAGGAATAGGGTCCACAGTAGCTAATGGGCCGCGTTTGGGGGTGGCCCAATCAGGTGAGGGCCCTAAGTTGTCCAAATCCAAGTCTGGTGTTGATTCATCGTTGAATCTAGTTTTGGAAACAGATCAGTTAATTTCTTCAGTTGGAAAAAAAGGGGAGGGAAGATCAGAAGTCGCCATACACGTGGTTCCATCAATAAACCACTTGGTGGAGTCCCAAGATCCCCCCACTCCTCCGTTACTCATCAATATGAATTTAAACCCCACGGTTAACCAAGTTAACACTTCTCCTTCTCTCTCTCATACCCCTTCAGCTTCTTCCCATTCTTCTCAACTTCTTCCTCAAGCTTCTCTGAATAGTTTTCCTAGTAATGGCGGGCAATCAAACTCCGAAATCATCATGCATGCAAGTGAATTCCAGTCCGAGGGGTGCATCCCGGCGGGGGAGGCAAACTTGGGTGGCCAGGGGGCCACGGTTCTTTCAGAGCAGGGGGGTTCCGACGGATGTAATAGAAGTTCCACGGGTGTCGGGGTCGATCTTTCAACCGGAGTTACTTCAACTATTTCCGACTCAGGCGGAGATGAGTCCATGTGTGACGGAGAGAGACACGGGTCGGTCATTCGAGAATCCGGCGGAGGAGGCGCGACGGTTGTTGGCGAATTTACAGAAGCAGGAGCAATTGTACACGGGTCCAATTTCTCGACCTCGTCTGGAATTACCCCGGAATTTCAGCAAGCTTCCTTTGCCAGGAACGGCGCCGGATTTCAATCCCATCACCATTCAGTCTCCGTTAACTCGGGGATTACCAAAAGAGGTTCCCATAATTCCTTTACAATTCGAAACACAAGGGCAAGAAATGGGTCTGTCGGGTCGCCATACAGCACTTTACGAAACGCAACAAGAAGTCGTCGGAGTGCAGATTCAGGGTCGGTACTATCGTCAACTATTGGAGCCGTTGAAGATATTCACGTATGTGACGCCAATTCGGTTGGAGGATCTGGGAATGATGGGGTTGTCTCACCATTGGAGGGATTGGGCGGAGTTCTTTCTCCCCCTGAATGCGGGTCCAAATGA

mRNA sequence

ATGGAGATTCAGTCTCCAACGGAACCGCCCGATAAGATGATGGCTGATGTCCCACCCGTTGGAATTTCACCAGAGTTGCCTAGGGAGATGCCTTCCTTCAGGGAGGTGGTTGCTTCGTCGACGCAGTGGTTTACGGAGGCGAGGAAAATTGTAACGGCATCGAAGGAATGGGAGGATTGTGAGGAGCTTCCACCAGATAGCAACTTGTCAGTGCAATTCAGTAAACTTACTTTGGATCGGTTACGAAGCCCATGGAGACTTACTCTCATGGGAAAGTGCTTGGGAATCCAAGTACGATCGAGTATTATGGAGGCTAGAGTTCGTGCTATGTGGAGAATTAAAGGTTTAGTGGAGGTGATTGATGTTGGTAGTGGAGTTTTTTTGTTTAAATTTACTCAAGGGGATGATTATGAACGCGCTCTGTTTGGAGGTCCTTGGTTTGTGATGGAGCATTATCTCATGTTATCACCGTGGAAGCCAAATTTTCGGCCGTCAAGGGACGGATTTGATCAAATGTCTGTGTGGATTAGGATTGAGGAGTTACCAATTGAGTATTATGATAAGGAGGCTCTGTTTGCCATTGCCTTGGTGATTGGTAAACCAATTCGTGTTGATTATTCAACGGATAAGATTACTCGGGGTCGTTATGCTAGGGTTTGTGTGGAGATTGATCTCACTAAGCCTTTAATCTCTAAGGTTTGGGTTGGGGGATCATGGCAAGCAATTCAATACGAAAATATTTCTTCTCTGTGTTTTGCGTGTGGAAGGATAGGACATCTGCAGACGGAGTGTTCCGTGGAAAAGTTGGTTTCCTCTTCTGTTAAGGGGAAGGAGAAAATGAATCAGGACGGCGCGTGTGGGGGACAAGAGGCGGTGGTTATCCGAAACGTTGATGCAAACGGTGATCCCTATGCCACTGGAATGGAAGGTTCTGGGACTAAGGTTGACTTTACAAGTCATGATTATGGGCCATGGACTTTGGTGAGTCGTAAGCCCAAGCCACGTGGTCGATTTGGTAATAAAATCACCCCACATTCGAAGATCAATGAGTACAGAAGAGGAATAGGGTCCACAGTAGCTAATGGGCCGCGTTTGGGGGTGGCCCAATCAGGTGAGGGCCCTAAGTTGTCCAAATCCAAGTCTGGTGTTGATTCATCGTTGAATCTAGTTTTGGAAACAGATCAGTTAATTTCTTCAGTTGGAAAAAAAGGGGAGGGAAGATCAGAAGTCGCCATACACGTGGTTCCATCAATAAACCACTTGGTGGAGTCCCAAGATCCCCCCACTCCTCCGTTACTCATCAATATGAATTTAAACCCCACGGTTAACCAAGTTAACACTTCTCCTTCTCTCTCTCATACCCCTTCAGCTTCTTCCCATTCTTCTCAACTTCTTCCTCAAGCTTCTCTGAATAGTTTTCCTAGTAATGGCGGGCAATCAAACTCCGAAATCATCATGCATGCAAGTGAATTCCAGTCCGAGGGGTGCATCCCGGCGGGGGAGGCAAACTTGGGTGGCCAGGGGGCCACGGTTCTTTCAGAGCAGGGGGGTTCCGACGGATGTAATAGAAGTTCCACGGGTGTCGGGGTCGATCTTTCAACCGGAGTTACTTCAACTATTTCCGACTCAGGCGGAGATGAGTCCATGTGTGACGGAGAGAGACACGGGTCGGTCATTCGAGAATCCGGCGGAGGAGGCGCGACGGTTGTTGGCGAATTTACAGAAGCAGGAGCAATTGTACACGGGTCCAATTTCTCGACCTCGTCTGGAATTACCCCGGAATTTCAGCAAGCTTCCTTTGCCAGGAACGGCGCCGGATTTCAATCCCATCACCATTCAGTCTCCGTTAACTCGGGGATTACCAAAAGAGGTTCCCATAATTCCTTTACAATTCGAAACACAAGGGCAAGAAATGGGTCTGTCGGGTCGCCATACAGCACTTTACGAAACGCAACAAGAAGTCGTCGGAGTGCAGATTCAGGGTCGGTACTATCGTCAACTATTGGAGCCGTTGAAGATATTCACGTATGTGACGCCAATTCGGTTGGAGGATCTGGGAATGATGGGGTTGTCTCACCATTGGAGGGATTGGGCGGAGTTCTTTCTCCCCCTGAATGCGGGTCCAAATGA

Coding sequence (CDS)

ATGGAGATTCAGTCTCCAACGGAACCGCCCGATAAGATGATGGCTGATGTCCCACCCGTTGGAATTTCACCAGAGTTGCCTAGGGAGATGCCTTCCTTCAGGGAGGTGGTTGCTTCGTCGACGCAGTGGTTTACGGAGGCGAGGAAAATTGTAACGGCATCGAAGGAATGGGAGGATTGTGAGGAGCTTCCACCAGATAGCAACTTGTCAGTGCAATTCAGTAAACTTACTTTGGATCGGTTACGAAGCCCATGGAGACTTACTCTCATGGGAAAGTGCTTGGGAATCCAAGTACGATCGAGTATTATGGAGGCTAGAGTTCGTGCTATGTGGAGAATTAAAGGTTTAGTGGAGGTGATTGATGTTGGTAGTGGAGTTTTTTTGTTTAAATTTACTCAAGGGGATGATTATGAACGCGCTCTGTTTGGAGGTCCTTGGTTTGTGATGGAGCATTATCTCATGTTATCACCGTGGAAGCCAAATTTTCGGCCGTCAAGGGACGGATTTGATCAAATGTCTGTGTGGATTAGGATTGAGGAGTTACCAATTGAGTATTATGATAAGGAGGCTCTGTTTGCCATTGCCTTGGTGATTGGTAAACCAATTCGTGTTGATTATTCAACGGATAAGATTACTCGGGGTCGTTATGCTAGGGTTTGTGTGGAGATTGATCTCACTAAGCCTTTAATCTCTAAGGTTTGGGTTGGGGGATCATGGCAAGCAATTCAATACGAAAATATTTCTTCTCTGTGTTTTGCGTGTGGAAGGATAGGACATCTGCAGACGGAGTGTTCCGTGGAAAAGTTGGTTTCCTCTTCTGTTAAGGGGAAGGAGAAAATGAATCAGGACGGCGCGTGTGGGGGACAAGAGGCGGTGGTTATCCGAAACGTTGATGCAAACGGTGATCCCTATGCCACTGGAATGGAAGGTTCTGGGACTAAGGTTGACTTTACAAGTCATGATTATGGGCCATGGACTTTGGTGAGTCGTAAGCCCAAGCCACGTGGTCGATTTGGTAATAAAATCACCCCACATTCGAAGATCAATGAGTACAGAAGAGGAATAGGGTCCACAGTAGCTAATGGGCCGCGTTTGGGGGTGGCCCAATCAGGTGAGGGCCCTAAGTTGTCCAAATCCAAGTCTGGTGTTGATTCATCGTTGAATCTAGTTTTGGAAACAGATCAGTTAATTTCTTCAGTTGGAAAAAAAGGGGAGGGAAGATCAGAAGTCGCCATACACGTGGTTCCATCAATAAACCACTTGGTGGAGTCCCAAGATCCCCCCACTCCTCCGTTACTCATCAATATGAATTTAAACCCCACGGTTAACCAAGTTAACACTTCTCCTTCTCTCTCTCATACCCCTTCAGCTTCTTCCCATTCTTCTCAACTTCTTCCTCAAGCTTCTCTGAATAGTTTTCCTAGTAATGGCGGGCAATCAAACTCCGAAATCATCATGCATGCAAGTGAATTCCAGTCCGAGGGGTGCATCCCGGCGGGGGAGGCAAACTTGGGTGGCCAGGGGGCCACGGTTCTTTCAGAGCAGGGGGGTTCCGACGGATGTAATAGAAGTTCCACGGGTGTCGGGGTCGATCTTTCAACCGGAGTTACTTCAACTATTTCCGACTCAGGCGGAGATGAGTCCATGTGTGACGGAGAGAGACACGGGTCGGTCATTCGAGAATCCGGCGGAGGAGGCGCGACGGTTGTTGGCGAATTTACAGAAGCAGGAGCAATTGTACACGGGTCCAATTTCTCGACCTCGTCTGGAATTACCCCGGAATTTCAGCAAGCTTCCTTTGCCAGGAACGGCGCCGGATTTCAATCCCATCACCATTCAGTCTCCGTTAACTCGGGGATTACCAAAAGAGGTTCCCATAATTCCTTTACAATTCGAAACACAAGGGCAAGAAATGGGTCTGTCGGGTCGCCATACAGCACTTTACGAAACGCAACAAGAAGTCGTCGGAGTGCAGATTCAGGGTCGGTACTATCGTCAACTATTGGAGCCGTTGAAGATATTCACGTATGTGACGCCAATTCGGTTGGAGGATCTGGGAATGATGGGGTTGTCTCACCATTGGAGGGATTGGGCGGAGTTCTTTCTCCCCCTGAATGCGGGTCCAAATGA

Protein sequence

MEIQSPTEPPDKMMADVPPVGISPELPREMPSFREVVASSTQWFTEARKIVTASKEWEDCEELPPDSNLSVQFSKLTLDRLRSPWRLTLMGKCLGIQVRSSIMEARVRAMWRIKGLVEVIDVGSGVFLFKFTQGDDYERALFGGPWFVMEHYLMLSPWKPNFRPSRDGFDQMSVWIRIEELPIEYYDKEALFAIALVIGKPIRVDYSTDKITRGRYARVCVEIDLTKPLISKVWVGGSWQAIQYENISSLCFACGRIGHLQTECSVEKLVSSSVKGKEKMNQDGACGGQEAVVIRNVDANGDPYATGMEGSGTKVDFTSHDYGPWTLVSRKPKPRGRFGNKITPHSKINEYRRGIGSTVANGPRLGVAQSGEGPKLSKSKSGVDSSLNLVLETDQLISSVGKKGEGRSEVAIHVVPSINHLVESQDPPTPPLLINMNLNPTVNQVNTSPSLSHTPSASSHSSQLLPQASLNSFPSNGGQSNSEIIMHASEFQSEGCIPAGEANLGGQGATVLSEQGGSDGCNRSSTGVGVDLSTGVTSTISDSGGDESMCDGERHGSVIRESGGGGATVVGEFTEAGAIVHGSNFSTSSGITPEFQQASFARNGAGFQSHHHSVSVNSGITKRGSHNSFTIRNTRARNGSVGSPYSTLRNATRSRRSADSGSVLSSTIGAVEDIHVCDANSVGGSGNDGVVSPLEGLGGVLSPPECGSK
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo01673Spo01673gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo01673.1Spo01673.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo01673.1.CDS.1Spo01673.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo01673.1.exon.1Spo01673.1.exon.1exon


Homology
BLAST of Spo01673.1 vs. NCBI nr
Match: gi|731343488|ref|XP_010682918.1| (PREDICTED: uncharacterized protein LOC104897680 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 327.4 bits (838), Expect = 6.200e-86
Identity = 157/320 (49.06%), Postives = 216/320 (67.50%), Query Frame = 1

		  

Query: 32  SFREVVASSTQWFTEARKIVTASKEWEDCEELPPDSNLSVQFSKLTLDRLRSPWRLTLMG 91
           SF+EVV+SS+QWF EA+ +  +S EW++ E   P     VQFSK  L +LR PW LTLMG
Sbjct: 42  SFKEVVSSSSQWFPEAKAVYLSSMEWDEPELEAPSGVNVVQFSKEKLSQLRKPWGLTLMG 101

Query: 92  KCLGIQVRSSIMEARVRAMWRIKGLVEVIDVGSGVFLFKFTQGDDYERALFGGPWFVMEH 151
           KCLGI VR S +  RVR+MW+ +G +EVID+G   +LF+F+  DDYERALFGGPW+V++H
Sbjct: 102 KCLGISVRPSFITQRVRSMWKPRGTLEVIDLGKDTYLFRFSLQDDYERALFGGPWYVLDH 161

Query: 152 YLMLSPWKPNFRPSRDGFDQMSVWIRIEELPIEYYDKEALFAIALVIGKPIRVDYSTDKI 211
           YLM++ W+PNFRP+ + F  M+VWI + ELP+EYYDKEALFAIA  +GKPIRVDY+T+ I
Sbjct: 162 YLMVTQWQPNFRPTHNPFGSMAVWIHLPELPVEYYDKEALFAIASKLGKPIRVDYATNHI 221

Query: 212 TRGRYARVCVEIDLTKPLISKVWVGGSWQAIQYENISSLCFACGRIGHLQTECSVEKLVS 271
           TR RYAR+C+EI+L+KP+ISK+W+G  WQ I YEN+ SLCF CG IGH + +C +E    
Sbjct: 222 TRARYARICIEINLSKPIISKIWIGNQWQVILYENLHSLCFVCGGIGHQKNQC-IEPKGK 281

Query: 272 SSVKGKEKMNQDGACGGQEAVV------IRNVDANGDPYATGMEG--SGTK--------- 331
           + +   E  +++G  G Q          + N   +G  + +  +G  S TK         
Sbjct: 282 AVMDQLESESREGTDGSQLYPSQNIDPGVSNAKDDGGTFVSDNQGLQSPTKNSPSPLKVS 341

Query: 332 -VDFTSHDYGPWTLVSRKPK 334
             +    ++GPWT+VS + +
Sbjct: 342 AKESLGEEFGPWTMVSHRKR 360

BLAST of Spo01673.1 vs. NCBI nr
Match: gi|332322101|emb|CCA65996.1| (hypothetical protein [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 313.9 bits (803), Expect = 7.100e-82
Identity = 174/397 (43.83%), Postives = 238/397 (59.95%), Query Frame = 1

		  

Query: 24  PELPREMPSFREVVASSTQWFTEARKIVTASKEWEDCEELP-PDSNLSVQFSKLTLDRLR 83
           P+    + SFR+ VA STQWF EA+K++  S EW+D EE+P PDS L+V F+K TL +LR
Sbjct: 61  PQARGNLSSFRDAVAGSTQWFREAKKLMEVSLEWDD-EEVPIPDSQLAVSFTKETLWKLR 120

Query: 84  SPWRLTLMGKCLGIQVRSSIMEARVRAMWRIKGLVEVIDVGSGVFLFKFTQGDDYERALF 143
            PWR TLMGK LG+ +  + +  RV  +W+    VEVID+G  VFLFKF  G+D E+ALF
Sbjct: 121 EPWRNTLMGKVLGMSISRNFLVERVNRIWKTNDKVEVIDLGHDVFLFKFNNGNDMEKALF 180

Query: 144 GGPWFVMEHYLMLSPWKPNFRPSRDGFDQMSVWIRIEELPIEYYDKEALFAIALVIGKPI 203
           GGPWF++ HYLML+ WKP+FRPS+  FD++ VWIR  ELP+EYYDKEALFAIA  +GKPI
Sbjct: 181 GGPWFILNHYLMLTRWKPDFRPSQSVFDKIMVWIRFPELPLEYYDKEALFAIAGKVGKPI 240

Query: 204 RVDYSTDKITRGRYARVCVEIDLTKPLISKVWVGGSWQAIQYENISSLCFACGRIGHLQT 263
           +VDY+TD + RGRYARVC+E+DL K L+SKVWV  +WQ ++YEN+S +CF CG+IGH + 
Sbjct: 241 KVDYATDHMARGRYARVCIELDLAKALVSKVWVARAWQNVEYENLSLVCFLCGKIGHRRD 300

Query: 264 ECS---VEKLVSSSVKGKEKMNQDG----ACGGQEAVVIRNVDANGDPYA-TGMEGSGTK 323
           +CS    E+   + VK ++ + ++        G+E+   R V    D  A  G+ G    
Sbjct: 301 QCSHGLGEQNRKNEVKQQDHVMEENRLEKGSHGEESNSWRMVGETTDDVACKGLPGKAMM 360

Query: 324 VDFTSHDYGPWTLVSRKPKPRGRFGNKITPHSKINEYRRGIGSTVANGPRLGVAQSGEGP 383
               S D           K      +K  P   +   +R +G     G   G  ++GEG 
Sbjct: 361 TK-DSQDVVAEENKQETTKLNNEGEDKEGPWIVVTNIKRRVGKG-KEGNSGGHPRNGEGT 420

Query: 384 KLSKS------KSGVDSSLNLVLETDQLISSVGKKGE 406
             +K       + G     NL L  ++  +  GK  E
Sbjct: 421 SKTKGRYGKEIRGGTQLRTNLDLNNNRWRALAGKDQE 454

BLAST of Spo01673.1 vs. NCBI nr
Match: gi|731358295|ref|XP_010690660.1| (PREDICTED: uncharacterized protein LOC104904165 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 312.0 bits (798), Expect = 2.700e-81
Identity = 152/335 (45.37%), Postives = 209/335 (62.39%), Query Frame = 1

		  

Query: 24  PELPREMPSFREVVASSTQWFTEARKIVTASKEWEDCEELPPDSNLSVQFSKLTLDRLRS 83
           P LP    SFR++VA S+QWF EA+++V  S EWE+     PDS L+V FSK  L  LR 
Sbjct: 65  PTLPVTGGSFRDIVAGSSQWFKEAKQLVQTSMEWEEEAVEIPDSQLAVSFSKEKLQSLRE 124

Query: 84  PWRLTLMGKCLGIQVRSSIMEARVRAMWRIKGLVEVIDVGSGVFLFKFTQGDDYERALFG 143
           PWR TLM K LG+ +  + +  RV  MW+ K  +EVID+G G+FL KF   DD ERAL+G
Sbjct: 125 PWRNTLMAKVLGMPINRNFLVDRVNRMWKTKDRLEVIDLGQGIFLLKFHNSDDMERALYG 184

Query: 144 GPWFVMEHYLMLSPWKPNFRPSRDGFDQMSVWIRIEELPIEYYDKEALFAIALVIGKPIR 203
            PWF++ HYLML+ WKP+FRPS   FD++ VWIR  ELP+EYY+K+ALFAIA  +GKPI+
Sbjct: 185 SPWFILNHYLMLTKWKPDFRPSSSSFDKIMVWIRFPELPLEYYEKDALFAIAEKVGKPIK 244

Query: 204 VDYSTDKITRGRYARVCVEIDLTKPLISKVWVGGSWQAIQYENISSLCFACGRIGHLQTE 263
           VDY+TD + RGRYARVC+E++L+K L+++VWV  +WQ ++YEN+  +CF CGRIGH Q +
Sbjct: 245 VDYATDTVVRGRYARVCIELELSKALVTRVWVAKAWQTVEYENLDLVCFKCGRIGHRQDQ 304

Query: 264 CSVEKLVSSSVKGKEKM-------------NQDGACGGQEAVVIR--NVDANGDPYATGM 323
           C ++   +  V   E++             N+D      EA+V+       NGDP     
Sbjct: 305 CLMKTEKNKGVLQLERLPQRVADDGGSTVHNKDMEVVDAEAMVVEKDKEKVNGDPNKILK 364

Query: 324 EGSGTKVDFTSH----------DYGPWTLVSRKPK 334
           +     ++  +           DYGPW +V+   K
Sbjct: 365 QDFPQILEIKTQGKNRTGNDEVDYGPWIVVTNSRK 399

BLAST of Spo01673.1 vs. NCBI nr
Match: gi|731313725|ref|XP_010681547.1| (PREDICTED: uncharacterized protein LOC104896496 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 268.9 bits (686), Expect = 2.600e-68
Identity = 124/214 (57.94%), Postives = 168/214 (78.50%), Query Frame = 1

		  

Query: 23  SPELPREMPSFREVVASSTQWFTEARKIVTASKEWEDCEELPPDSNLSVQFSKLTLDRLR 82
           S  +P+++ SF+E+V+SS++WF EA+ I   S +WE+ ++ PP     V FSK  L +LR
Sbjct: 10  SVPMPQKI-SFKEIVSSSSRWFPEAKAIYLNSMDWEESDQEPPIGANVVLFSKDKLTQLR 69

Query: 83  SPWRLTLMGKCLGIQVRSSIMEARVRAMWRIKGLVEVIDVGSGVFLFKFTQGDDYERALF 142
            PW LTLMGKCLGI VR SIM  RVR+M +  G +EVID+G  VFLF+F   +D E+ALF
Sbjct: 70  QPWSLTLMGKCLGISVRPSIMTQRVRSMRKPHGSLEVIDLGKDVFLFRFRLKNDLEKALF 129

Query: 143 GGPWFVMEHYLMLSPWKPNFRPSRDGFDQMSVWIRIEELPIEYYDKEALFAIALVIGKPI 202
           GGPW++++HYLML+ W+PNFRP+++ F+++ VWI + ELP+EYYDKEALF IA  +GKPI
Sbjct: 130 GGPWYILDHYLMLNQWQPNFRPNQNPFNKLVVWIHLPELPVEYYDKEALFLIASKLGKPI 189

Query: 203 RVDYSTDKITRGRYARVCVEIDLTKPLISKVWVG 237
           RVDY+T+ +TR RYARVCV+IDL+KP++SKVWVG
Sbjct: 190 RVDYATNHLTRARYARVCVDIDLSKPILSKVWVG 222

BLAST of Spo01673.1 vs. NCBI nr
Match: gi|902192767|gb|KNA12110.1| (hypothetical protein SOVF_128880 [Spinacia oleracea])

HSP 1 Score: 258.1 bits (658), Expect = 4.600e-65
Identity = 126/134 (94.03%), Postives = 129/134 (96.27%), Query Frame = 1

		  

Query: 280 MNQDGACGGQEAVVIRNVDANGDPYATGMEGSGTKVDFTSHDYGPWTLVSRKPKPRGRFG 339
           M+QDGACGGQEAVVIRNVDANGDPYATGMEGSGTKVDFTSHDYGPWTLVSRKPKPRGRFG
Sbjct: 1   MSQDGACGGQEAVVIRNVDANGDPYATGMEGSGTKVDFTSHDYGPWTLVSRKPKPRGRFG 60

Query: 340 NKITPHSKINEYRRGIGSTVANGPRLGVAQSGEGPKLSKSKSGVDSSLNLVLETDQLISS 399
           NK TPHSKINEYRRGIGST+ANGPRLGVAQSGEGP+LSKSKSGVDSSLNLVLE D L SS
Sbjct: 61  NKSTPHSKINEYRRGIGSTIANGPRLGVAQSGEGPQLSKSKSGVDSSLNLVLEADHLTSS 120

Query: 400 VGKKGEGRSEVAIH 414
           VGKKGEGRSEV IH
Sbjct: 121 VGKKGEGRSEVTIH 134

BLAST of Spo01673.1 vs. UniProtKB/TrEMBL
Match: F4NCG7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.900e-82
Identity = 174/397 (43.83%), Postives = 238/397 (59.95%), Query Frame = 1

		  

Query: 24  PELPREMPSFREVVASSTQWFTEARKIVTASKEWEDCEELP-PDSNLSVQFSKLTLDRLR 83
           P+    + SFR+ VA STQWF EA+K++  S EW+D EE+P PDS L+V F+K TL +LR
Sbjct: 61  PQARGNLSSFRDAVAGSTQWFREAKKLMEVSLEWDD-EEVPIPDSQLAVSFTKETLWKLR 120

Query: 84  SPWRLTLMGKCLGIQVRSSIMEARVRAMWRIKGLVEVIDVGSGVFLFKFTQGDDYERALF 143
            PWR TLMGK LG+ +  + +  RV  +W+    VEVID+G  VFLFKF  G+D E+ALF
Sbjct: 121 EPWRNTLMGKVLGMSISRNFLVERVNRIWKTNDKVEVIDLGHDVFLFKFNNGNDMEKALF 180

Query: 144 GGPWFVMEHYLMLSPWKPNFRPSRDGFDQMSVWIRIEELPIEYYDKEALFAIALVIGKPI 203
           GGPWF++ HYLML+ WKP+FRPS+  FD++ VWIR  ELP+EYYDKEALFAIA  +GKPI
Sbjct: 181 GGPWFILNHYLMLTRWKPDFRPSQSVFDKIMVWIRFPELPLEYYDKEALFAIAGKVGKPI 240

Query: 204 RVDYSTDKITRGRYARVCVEIDLTKPLISKVWVGGSWQAIQYENISSLCFACGRIGHLQT 263
           +VDY+TD + RGRYARVC+E+DL K L+SKVWV  +WQ ++YEN+S +CF CG+IGH + 
Sbjct: 241 KVDYATDHMARGRYARVCIELDLAKALVSKVWVARAWQNVEYENLSLVCFLCGKIGHRRD 300

Query: 264 ECS---VEKLVSSSVKGKEKMNQDG----ACGGQEAVVIRNVDANGDPYA-TGMEGSGTK 323
           +CS    E+   + VK ++ + ++        G+E+   R V    D  A  G+ G    
Sbjct: 301 QCSHGLGEQNRKNEVKQQDHVMEENRLEKGSHGEESNSWRMVGETTDDVACKGLPGKAMM 360

Query: 324 VDFTSHDYGPWTLVSRKPKPRGRFGNKITPHSKINEYRRGIGSTVANGPRLGVAQSGEGP 383
               S D           K      +K  P   +   +R +G     G   G  ++GEG 
Sbjct: 361 TK-DSQDVVAEENKQETTKLNNEGEDKEGPWIVVTNIKRRVGKG-KEGNSGGHPRNGEGT 420

Query: 384 KLSKS------KSGVDSSLNLVLETDQLISSVGKKGE 406
             +K       + G     NL L  ++  +  GK  E
Sbjct: 421 SKTKGRYGKEIRGGTQLRTNLDLNNNRWRALAGKDQE 454

BLAST of Spo01673.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QXZ0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_128880 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 3.200e-65
Identity = 126/134 (94.03%), Postives = 129/134 (96.27%), Query Frame = 1

		  

Query: 280 MNQDGACGGQEAVVIRNVDANGDPYATGMEGSGTKVDFTSHDYGPWTLVSRKPKPRGRFG 339
           M+QDGACGGQEAVVIRNVDANGDPYATGMEGSGTKVDFTSHDYGPWTLVSRKPKPRGRFG
Sbjct: 1   MSQDGACGGQEAVVIRNVDANGDPYATGMEGSGTKVDFTSHDYGPWTLVSRKPKPRGRFG 60

Query: 340 NKITPHSKINEYRRGIGSTVANGPRLGVAQSGEGPKLSKSKSGVDSSLNLVLETDQLISS 399
           NK TPHSKINEYRRGIGST+ANGPRLGVAQSGEGP+LSKSKSGVDSSLNLVLE D L SS
Sbjct: 61  NKSTPHSKINEYRRGIGSTIANGPRLGVAQSGEGPQLSKSKSGVDSSLNLVLEADHLTSS 120

Query: 400 VGKKGEGRSEVAIH 414
           VGKKGEGRSEV IH
Sbjct: 121 VGKKGEGRSEVTIH 134

BLAST of Spo01673.1 vs. UniProtKB/TrEMBL
Match: Q2HX36_IPOBA (Uncharacterized protein OS=Ipomoea batatas PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 7.400e-46
Identity = 112/377 (29.71%), Postives = 182/377 (48.28%), Query Frame = 1

		  

Query: 5   SPTEPPDK--MMADVPPVGISPELPREMPSFREVVASSTQWFTEARK------------I 64
           +P  PP    M  + PP   + ++     SF E V   + + T+ R             +
Sbjct: 8   APVVPPQDVTMTEEAPPPRAAKKIRTTKRSFAEAVTDQSSFNTDERPQSDEYDWAFEDPV 67

Query: 65  VTASKEWEDCEELPPDSNLSVQFSKLTLDRLRSPWRLTLMGKCLGIQVRSSIMEARVRAM 124
           V +  E ++ ++   D    V+FSK     L   WR+ L+ K LG  + ++++  R  ++
Sbjct: 68  VESDSEMDNQDD--SDDRPVVKFSKALRQELCREWRMALIVKYLGKNLTANVLNQRAPSL 127

Query: 125 WRIKGLVEVIDVGSGVFLFKFTQGDDYERALFGGPWFVMEHYLMLSPWKPNFRPSRDGFD 184
           W++KG V++ID+G G F+ +F    DY   L  GPW + ++YL+   W PNF P    F 
Sbjct: 128 WQLKGRVQIIDIGFGCFVMRFDDKKDYLHVLLDGPWKIFDNYLITQRWVPNFEPRTAKFQ 187

Query: 185 QMSVWIRIEELPIEYYDKEALFAIALVIGKPIRVDYSTDKITRGRYARVCVEIDLTKPLI 244
           +M+VW+R+ EL +EY+  + + AI   IGKP+R+D +T    +GR+AR  VEIDL KPL+
Sbjct: 188 KMAVWVRLPELSMEYFRDDTIKAILENIGKPLRLDRTTMAREKGRFARAAVEIDLGKPLV 247

Query: 245 SKVWVGGSWQAIQYENISSLCFACGRIGHLQTECSVEKLVSSSVKGKEKMNQDGACGGQE 304
           S++WV G  Q ++YE +  +CF CG +GH +  C + +  +          +  A   + 
Sbjct: 248 SEIWVMGDVQKVEYEGLHVVCFGCGVVGHREQACPLARPTAPETMATGSNTETAADTAEP 307

Query: 305 AVVIRNVDANGDPYATGMEGSGTKVDFTSHDYGPWTLVSRKPK------PRGRFGNKITP 362
                  DA   P                  YGPW +V+RK +      PR +  NK   
Sbjct: 308 QPAEGPADAVTQP-------------AERRRYGPWMIVTRKQQATTNNPPRQQATNKPNQ 367

BLAST of Spo01673.1 vs. UniProtKB/TrEMBL
Match: A0A0F6NGC7_IPOBA (LINE-type retrotransposon LIb DNA OS=Ipomoea batatas PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.100e-44
Identity = 119/356 (33.43%), Postives = 186/356 (52.25%), Query Frame = 1

		  

Query: 9   PPDKMMADVPPVGISPELPREMP-SFREVVAS-STQWFTEARKIVTASKEWEDCEELPPD 68
           PPD+ M +  P   S +  R    SF + VAS +T    E+ ++      +ED  E+  D
Sbjct: 12  PPDEQMEEGDPHAHSAKKSRATKRSFADAVASLNTTTSEESSRVADNIWAFED-PEVESD 71

Query: 69  SNLSVQ----------FSKLTLDRLRSPWRLTLMGKCLGIQVRSSIMEARVRAMWRIKGL 128
           S + V+          FSK     L S W++ L+ K LG  +  +++  R+ A+W ++G 
Sbjct: 72  SEVDVREMGDTRPRVTFSKELRKELCSAWKMALIIKYLGKSIHFNVLNQRLPAIWNLQGK 131

Query: 129 VEVIDVGSGVFLFKFTQGDDYERALFGGPWFVMEHYLMLSPWKPNFRPSRDGFDQMSVWI 188
           + +ID+G G F+ +F   +DY  AL  GPW +  +YL+   W P FRP      +M+VWI
Sbjct: 132 MTLIDLGYGCFVARFDNKNDYLHALIDGPWKIFGNYLVTQRWVPEFRPRTAKLSKMAVWI 191

Query: 189 RIEELPIEYYDKEALFAIALVIGKPIRVDYSTDKITRGRYARVCVEIDLTKPLISKVWVG 248
           RI +LP+EY+  +A+  IA  +GKP+++D +T    +G++AR+ VEIDL+KPL+S+VWVG
Sbjct: 192 RIPDLPMEYFRDDAIRDIAENVGKPLKLDRTTIIAAKGKFARIAVEIDLSKPLVSEVWVG 251

Query: 249 GSWQAIQYENISSLCFACGRIGHLQTECSVEKL---VSSSVKGKEKMNQDGACGGQEAVV 308
              Q ++YE +  +CF+CG +GH +  C   K     + +V+  +    + AC  Q AV 
Sbjct: 252 NYLQTVEYEGLHVICFSCGVVGHREQSCPDSKQNVPETPNVEQTQNTMPEAAC-MQHAVP 311

Query: 309 IRNVDANGDPYATGMEGSGTKVDFTSHDYGPWTLVSRKPKPRGRFGNKITPHSKIN 350
             +   N     T               YG W +V+ K K      N+   HSKIN
Sbjct: 312 ATSPVQNQTTVPTAPVQE-------RRPYGTWMMVTNKKKSVPVAKNQ--HHSKIN 356

BLAST of Spo01673.1 vs. UniProtKB/TrEMBL
Match: Q2HX35_IPOBA (Uncharacterized protein OS=Ipomoea batatas PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 4.100e-44
Identity = 107/365 (29.32%), Postives = 176/365 (48.22%), Query Frame = 1

		  

Query: 5   SPTEPPDK--MMADVPPVGISPELPREMPSFREVVASSTQWFTEARK------------I 64
           +P  PP    M  +  P   + ++     SF E V   + + T+ R             +
Sbjct: 8   APVVPPQDVTMTEEASPPRAAKKIRTTKRSFAEAVTDQSSFNTDERPQSDEYDWAFENPV 67

Query: 65  VTASKEWEDCEELPPDSNLSVQFSKLTLDRLRSPWRLTLMGKCLGIQVRSSIMEARVRAM 124
           V +  E ++ ++   D    V+FSK     L   WR+ L+ K LG  + ++++  R  ++
Sbjct: 68  VESDSEMDNQDD--SDDRPVVKFSKALRQELCREWRMALIVKYLGKNLTANVLNQRAPSL 127

Query: 125 WRIKGLVEVIDVGSGVFLFKFTQGDDYERALFGGPWFVMEHYLMLSPWKPNFRPSRDGFD 184
           W++KG V++ID+G G F+ +F    DY   L  GPW + ++YL+   W P+F+P    F 
Sbjct: 128 WQLKGRVQIIDIGFGCFVMRFDDKKDYLHVLLDGPWRIFDNYLITQRWVPDFKPRTAKFQ 187

Query: 185 QMSVWIRIEELPIEYYDKEALFAIALVIGKPIRVDYSTDKITRGRYARVCVEIDLTKPLI 244
           +M+VW+R+ EL +EY+  + + AI   IGKP+ +D +T    RGR+AR  VEIDL KPL+
Sbjct: 188 KMAVWVRLSELSMEYFRDDTIKAILENIGKPLGLDRTTMARERGRFARAAVEIDLDKPLV 247

Query: 245 SKVWVGGSWQAIQYENISSLCFACGRIGHLQTECSVEKLVSSSVKGKEKMNQDGACGGQE 304
           S++WV G  Q ++YE +  +CF CG +GH +  C + +  +          +  A   + 
Sbjct: 248 SEIWVMGDVQKVEYEGLHVVCFGCGVVGHREQACPLARPTAPETMATGSNTETAADTAEP 307

Query: 305 AVVIRNVDANGDPYATGMEGSGTKVDFTSHDYGPWTLVSRKPKPRGRFGNKITPHSKINE 356
                  DA   P                  YGPW +V+RK +       +    +K N+
Sbjct: 308 QPAEGPADAVTQP-------------AERRRYGPWMIVTRKQQATTNNPPRQQATNKPNQ 357

BLAST of Spo01673.1 vs. TAIR (Arabidopsis)
Match: AT2G01050.1 (zinc ion binding;nucleic acid binding)

HSP 1 Score: 157.5 bits (397), Expect = 3.000e-38
Identity = 69/208 (33.17%), Postives = 115/208 (55.29%), Query Frame = 1

		  

Query: 66  DSNLSVQFSKLTLDRLRSPWRLTLMGKCLGIQVRSSIMEARVRAMWRIKGLVEVIDVGSG 125
           D    +   +  L+ +   W+  ++ K LG Q+  S++  ++R +W+  G++ V+D+   
Sbjct: 58  DEEPVITIGEEVLEAMNGLWKKCMIVKVLGSQIPISVLNRKLRELWKPSGVMTVMDLPRQ 117

Query: 126 VFLFKFTQGDDYERALFGGPWFVMEHYLMLSPWKPNFRPSRDGFDQMSVWIRIEELPIEY 185
            F+ +F   ++Y  AL GGPW V+ +YL++  W   F P RD      VW+R+  +P  Y
Sbjct: 118 FFMIRFELEEEYMAALTGGPWRVLGNYLLVQDWSSRFDPLRDDIVTTPVWVRLSNIPYNY 177

Query: 186 YDKEALFAIALVIGKPIRVDYSTDKITRGRYARVCVEIDLTKPLISKVWVGGSWQAIQYE 245
           Y +  L  IA  +G+P++VD +T    +GR+ARVC+E++L KPL   V + G    + YE
Sbjct: 178 YHRCLLMEIARGLGRPLKVDMNTINFDKGRFARVCIEVNLAKPLKGTVLINGDRYFVAYE 237

Query: 246 NISSLCFACGRIGHLQTECSVEKLVSSS 274
            +S +C +CG  GHL   C    +V  S
Sbjct: 238 GLSKICSSCGIYGHLVHSCPRNVVVKVS 265

The following BLAST results are available for this feature:
BLAST of Spo01673.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|731343488|ref|XP_010682918.1|6.2e-8649.0PREDICTED: uncharacterized pro... [more]
gi|332322101|emb|CCA65996.1|7.1e-8243.8hypothetical protein [Beta vul... [more]
gi|731358295|ref|XP_010690660.1|2.7e-8145.3PREDICTED: uncharacterized pro... [more]
gi|731313725|ref|XP_010681547.1|2.6e-6857.9PREDICTED: uncharacterized pro... [more]
gi|902192767|gb|KNA12110.1|4.6e-6594.0hypothetical protein SOVF_1288... [more]
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BLAST of Spo01673.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
F4NCG7_BETVU4.9e-8243.8Uncharacterized protein OS=Bet... [more]
A0A0K9QXZ0_SPIOL3.2e-6594.0Uncharacterized protein OS=Spi... [more]
Q2HX36_IPOBA7.4e-4629.7Uncharacterized protein OS=Ipo... [more]
A0A0F6NGC7_IPOBA1.1e-4433.4LINE-type retrotransposon LIb ... [more]
Q2HX35_IPOBA4.1e-4429.3Uncharacterized protein OS=Ipo... [more]
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BLAST of Spo01673.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo01673.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G01050.13.0e-3833.1zinc ion binding;nucleic acid ... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typePROFILEPS50158ZF_CCHCcoord: 251..264
score: 9
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 79..221
score: 4.7
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 223..265
score: 6.
NoneNo IPR availablePANTHERPTHR31286FAMILY NOT NAMEDcoord: 70..285
score: 1.3
NoneNo IPR availablePANTHERPTHR31286:SF7SUBFAMILY NOT NAMEDcoord: 70..285
score: 1.3

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding