Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCCTTAGTTCCTTCACTTAGTGACCAACCACTTTATGCCCATCAAAGAAAATGTAAATAAATAAGACGAATACTCCGTCATTAAAAAAAAAGATCGGATATGGCACAGACATTGACAGCAGTATATTAGAGAGAAAATACAAAAGAGTAGTATAAACTCAATTATGCAACATAAATAAGACAACATCTCTGTATATTAAATATGAACTGACCAACTAACGACAGCTTTGACACAAGGAAGGAAGTGCTGCTACGTCGTTATTATTGTTACTCTCCAATGTATTTGATCTACGGAGTAATTATTAATTTTCCATTTTACATTCATTGTTGAAGTAGCTAAAATGGGGAAAACAGGAAAGTGGTTCAAGAATTTGCTGGTAGGAAAGAAGGACAAAGGCGAGAAGGATCAGAAGAAGAGTAATACTAATAATAATCAGTTGTCTAAAGGTGAGAAGGATCAGAAAAGTAATACCAATAATGAGGTGTCTGTCGTTTCGACGGATAATCATCTGAATGGTACGACTACTCAGGTAGCGGTAGTGGTACCGAGACCGACAACTCCGAAGGAGAAGGAGAAGAAGAGATGGAGTTTTAGAAGATCGTCTGCTAGTAATAACAGTAATAATAGTAATAATGTTAATGCGGCTAAGGATGTTGCTTCTGCTGATGCTGTTAGTGTTGAGAAATCTCAAGTTCCGCAGATGGCCGTAAATTTGGCGGGAGAGATGCAGGAGGCTGAGGTTGAGGTTGAGGTTGAGGTTGAGGTGGAGGTGGAGGTAGAAGCCGATGCAATTGTTGCAGAAGAGAATGTAACAGTGATGGATACACAAGTGGAAGAAGTGATGAATCCCCAGGCGGATTTTAGTGATTGTAAAGAAAATGAAACCGCTGTTGAGGATGAGGAGGCTGCTGCTGCTGCTGCTGCTGTCAAGATTCAGTCTGTGTTTCGCTCGTATCTGGTATGTCAAATTTTTAACTTTTTTTTTTAGTGAAAGAAAATAAAAGTGGTCAAAGATTAGGAAATTTGTTTGACCACAACAGGTAAACTATGATAATGACAGTGTCAAGATTCAAAGAATTGTGTGAATTGTAATAAATGGAAACGTGTATTGCAGGCTAGAAAGGCTCTGAAGGCACTAAGAGGTTTGGTGAAGTTGCAGGCGTTGGTAAGGGGTCATTTGGTAAGAAAGCAGGCAACAGCAACACTGAGATGTATGCAAGCGCTTATCACGGCTCAAGCTCGAGCTCGAGCTCAAAGGATCCGATCAGGGGATGACGGGACGCCCATTAATCATAGACAGTCTACTAACCGACGAAATAGCCAAGAGAATTTCAATCATGTTAGTATTCTGTTATTTGACTTTTCTTATCCATCATTTTCCATTAACATTCACATTTTGACAGTAGCAAAGTACTTCTATTCTTAGAATTATTTGATGCTAAAAATATGATCAAGATAAAACTAACGGATGCACTCCCAATTAGCAGAGTCAATCTCATTATTTCGATCAATCAAAGAATCAGGATTTAGTTTTCCTGATCCATCTTGCAATGTTAATTGATTATGGCTTAATCAAATCATGTAATCTTGCTGTGTAGAATAGGTGTCACTAATCGATTTAATTTCTTATTAGTAAATCCAATCATAAATCATTATTTTGTAAGAAAGTTGACAGATATTTCCTGACATCTCAAAGTAGTCTTAATGAGTCTGGATCGAGGAAGTCGTATATTAACAGTGCTGCTGTCTGTTCACACTGATCTCTTAACAACTAGGATAAAACAGAATAATTTGGAATTTGTATAATGATGCAGGACATGGAGGATAATATCAAGATAGTAGAAATGGATCGCGGAGATTTTATATCAAATGTTGACAGCAGGGATAGCTATTCGATATCAAGCCAACAACAAATTGATGATCGAATGGACAATAGAATGTCTACATATTATTCTAACCACAACCAGAATGCATACATAAAGCAGCAGGACTATCAGCAATATTCACCAGCTCCTTCAGCCATCACCGAATTGAGCCCAAGAACTTGCAGTGGCCACTTTGAGGATTATTGTTTCACCACTGCACAAAGCAGTCCGCAGTGCTACCCATCATCAAGGGCTCCTTTCTCATTCCCCCAACCTGATTTTGCAGAGACAATGTCATATGATTACCCTCTCTATCCAAATTACATGGCAAATACTCAATCTTCTAAAGCTAAAGCACGGTCACAAAGTGCACCTAAACAAAGGCCAGAGTTGGAGAGGCAACCAAGTCGTGGGAGAAGACCGTCTGTTGAAGGACGGAATATACCAAAGGGTGCCAAGATGCAGCGTTCCTCCTCCCAAATAGGTTCTGCTGCACAAAAGTACAATTATCCGTGGTCAGTTAAGCTTGATAAGTCCAGTGTTTCACTTAGAGAGAGTGAGTGTGGTTCCACTTGCTCCATGGCTACTAACGCTTACTACTGCAGATCGGTTGTATCATTTGATGTAAGTAATCATTCTAAACTAACCTTACAATTTCCAATTACAAACATTTTTTACTACAAATGCACTAAATCTTTTCTCTTTGTGAATTCAGCCAAGATGCTAGAGTACTGATGCTGTTTTCTTGCTAACACGCTCCAATGTCAGATTGGTTTAGTCACACAAGGAGAGCGCTCAGAAGAACAACTCTGCTAAAAGGTTGCTACATCATAATTGTTTTCGTTTGGTGTTTGTCTTATAATTGATTAATTCTAAGGGAGTATGCTACATATTAAAGTTTGCTTCTTTTTTTTTCTTCTTCTAAATTTCACTGTACTGAAGTTATTTGTATTTGATGTGTTCTTGGATTAATTAGTGAAGAAAATCAACAATTGATGTGCAGAGAGTAATAGCTATTTGAGCTATGTATAGTTTCTATAAGGTCCATTTGGATGCTTTAAGTGGTGATTTCACACAAAATTTTCCTATACATGTTTATATGATTTTTATTATTATTATTATTATTATTATTATTATTGTACCG TTCCTTAGTTCCTTCACTTAGTGACCAACCACTTTATGCCCATCAAAGAAAATGTAAATAAATAAGACGAATACTCCGTCATTAAAAAAAAAGATCGGATATGGCACAGACATTGACAGCAGTATATTAGAGAGAAAATACAAAAGAGTAGTATAAACTCAATTATGCAACATAAATAAGACAACATCTCTGTATATTAAATATGAACTGACCAACTAACGACAGCTTTGACACAAGGAAGGAAGTGCTGCTACGTCGTTATTATTGTTACTCTCCAATGTATTTGATCTACGGAGTAATTATTAATTTTCCATTTTACATTCATTGTTGAAGTAGCTAAAATGGGGAAAACAGGAAAGTGGTTCAAGAATTTGCTGGTAGGAAAGAAGGACAAAGGCGAGAAGGATCAGAAGAAGAGTAATACTAATAATAATCAGTTGTCTAAAGGTGAGAAGGATCAGAAAAGTAATACCAATAATGAGGTGTCTGTCGTTTCGACGGATAATCATCTGAATGGTACGACTACTCAGGTAGCGGTAGTGGTACCGAGACCGACAACTCCGAAGGAGAAGGAGAAGAAGAGATGGAGTTTTAGAAGATCGTCTGCTAGTAATAACAGTAATAATAGTAATAATGTTAATGCGGCTAAGGATGTTGCTTCTGCTGATGCTGTTAGTGTTGAGAAATCTCAAGTTCCGCAGATGGCCGTAAATTTGGCGGGAGAGATGCAGGAGGCTGAGGTTGAGGTTGAGGTTGAGGTTGAGGTGGAGGTGGAGGTAGAAGCCGATGCAATTGTTGCAGAAGAGAATGTAACAGTGATGGATACACAAGTGGAAGAAGTGATGAATCCCCAGGCGGATTTTAGTGATTGTAAAGAAAATGAAACCGCTGTTGAGGATGAGGAGGCTGCTGCTGCTGCTGCTGCTGTCAAGATTCAGTCTGTGTTTCGCTCGTATCTGGCTAGAAAGGCTCTGAAGGCACTAAGAGGTTTGGTGAAGTTGCAGGCGTTGGTAAGGGGTCATTTGGTAAGAAAGCAGGCAACAGCAACACTGAGATGTATGCAAGCGCTTATCACGGCTCAAGCTCGAGCTCGAGCTCAAAGGATCCGATCAGGGGATGACGGGACGCCCATTAATCATAGACAGTCTACTAACCGACGAAATAGCCAAGAGAATTTCAATCATGACATGGAGGATAATATCAAGATAGTAGAAATGGATCGCGGAGATTTTATATCAAATGTTGACAGCAGGGATAGCTATTCGATATCAAGCCAACAACAAATTGATGATCGAATGGACAATAGAATGTCTACATATTATTCTAACCACAACCAGAATGCATACATAAAGCAGCAGGACTATCAGCAATATTCACCAGCTCCTTCAGCCATCACCGAATTGAGCCCAAGAACTTGCAGTGGCCACTTTGAGGATTATTGTTTCACCACTGCACAAAGCAGTCCGCAGTGCTACCCATCATCAAGGGCTCCTTTCTCATTCCCCCAACCTGATTTTGCAGAGACAATGTCATATGATTACCCTCTCTATCCAAATTACATGGCAAATACTCAATCTTCTAAAGCTAAAGCACGGTCACAAAGTGCACCTAAACAAAGGCCAGAGTTGGAGAGGCAACCAAGTCGTGGGAGAAGACCGTCTGTTGAAGGACGGAATATACCAAAGGGTGCCAAGATGCAGCGTTCCTCCTCCCAAATAGGTTCTGCTGCACAAAAGTACAATTATCCGTGGTCAGTTAAGCTTGATAAGTCCAGTGTTTCACTTAGAGAGAGTGAGTGTGGTTCCACTTGCTCCATGGCTACTAACGCTTACTACTGCAGATCGGTTGTATCATTTGATCCAAGATGCTAGAGTACTGATGCTGTTTTCTTGCTAACACGCTCCAATGTCAGATTGGTTTAGTCACACAAGGAGAGCGCTCAGAAGAACAACTCTGCTAAAAGGTTGCTACATCATAATTGTTTTCGTTTGGTGTTTGTCTTATAATTGATTAATTCTAAGGGAGTATGCTACATATTAAAGTTTGCTTCTTTTTTTTTCTTCTTCTAAATTTCACTGTACTGAAGTTATTTGTATTTGATGTGTTCTTGGATTAATTAGTGAAGAAAATCAACAATTGATGTGCAGAGAGTAATAGCTATTTGAGCTATGTATAGTTTCTATAAGGTCCATTTGGATGCTTTAAGTGGTGATTTCACACAAAATTTTCCTATACATGTTTATATGATTTTTATTATTATTATTATTATTATTATTATTATTGTACCG ATGGGGAAAACAGGAAAGTGGTTCAAGAATTTGCTGGTAGGAAAGAAGGACAAAGGCGAGAAGGATCAGAAGAAGAGTAATACTAATAATAATCAGTTGTCTAAAGGTGAGAAGGATCAGAAAAGTAATACCAATAATGAGGTGTCTGTCGTTTCGACGGATAATCATCTGAATGGTACGACTACTCAGGTAGCGGTAGTGGTACCGAGACCGACAACTCCGAAGGAGAAGGAGAAGAAGAGATGGAGTTTTAGAAGATCGTCTGCTAGTAATAACAGTAATAATAGTAATAATGTTAATGCGGCTAAGGATGTTGCTTCTGCTGATGCTGTTAGTGTTGAGAAATCTCAAGTTCCGCAGATGGCCGTAAATTTGGCGGGAGAGATGCAGGAGGCTGAGGTTGAGGTTGAGGTTGAGGTTGAGGTGGAGGTGGAGGTAGAAGCCGATGCAATTGTTGCAGAAGAGAATGTAACAGTGATGGATACACAAGTGGAAGAAGTGATGAATCCCCAGGCGGATTTTAGTGATTGTAAAGAAAATGAAACCGCTGTTGAGGATGAGGAGGCTGCTGCTGCTGCTGCTGCTGTCAAGATTCAGTCTGTGTTTCGCTCGTATCTGGCTAGAAAGGCTCTGAAGGCACTAAGAGGTTTGGTGAAGTTGCAGGCGTTGGTAAGGGGTCATTTGGTAAGAAAGCAGGCAACAGCAACACTGAGATGTATGCAAGCGCTTATCACGGCTCAAGCTCGAGCTCGAGCTCAAAGGATCCGATCAGGGGATGACGGGACGCCCATTAATCATAGACAGTCTACTAACCGACGAAATAGCCAAGAGAATTTCAATCATGACATGGAGGATAATATCAAGATAGTAGAAATGGATCGCGGAGATTTTATATCAAATGTTGACAGCAGGGATAGCTATTCGATATCAAGCCAACAACAAATTGATGATCGAATGGACAATAGAATGTCTACATATTATTCTAACCACAACCAGAATGCATACATAAAGCAGCAGGACTATCAGCAATATTCACCAGCTCCTTCAGCCATCACCGAATTGAGCCCAAGAACTTGCAGTGGCCACTTTGAGGATTATTGTTTCACCACTGCACAAAGCAGTCCGCAGTGCTACCCATCATCAAGGGCTCCTTTCTCATTCCCCCAACCTGATTTTGCAGAGACAATGTCATATGATTACCCTCTCTATCCAAATTACATGGCAAATACTCAATCTTCTAAAGCTAAAGCACGGTCACAAAGTGCACCTAAACAAAGGCCAGAGTTGGAGAGGCAACCAAGTCGTGGGAGAAGACCGTCTGTTGAAGGACGGAATATACCAAAGGGTGCCAAGATGCAGCGTTCCTCCTCCCAAATAGGTTCTGCTGCACAAAAGTACAATTATCCGTGGTCAGTTAAGCTTGATAAGTCCAGTGTTTCACTTAGAGAGAGTGAGTGTGGTTCCACTTGCTCCATGGCTACTAACGCTTACTACTGCAGATCGGTTGTATCATTTGATCCAAGATGCTAG MGKTGKWFKNLLVGKKDKGEKDQKKSNTNNNQLSKGEKDQKSNTNNEVSVVSTDNHLNGTTTQVAVVVPRPTTPKEKEKKRWSFRRSSASNNSNNSNNVNAAKDVASADAVSVEKSQVPQMAVNLAGEMQEAEVEVEVEVEVEVEVEADAIVAEENVTVMDTQVEEVMNPQADFSDCKENETAVEDEEAAAAAAAVKIQSVFRSYLARKALKALRGLVKLQALVRGHLVRKQATATLRCMQALITAQARARAQRIRSGDDGTPINHRQSTNRRNSQENFNHDMEDNIKIVEMDRGDFISNVDSRDSYSISSQQQIDDRMDNRMSTYYSNHNQNAYIKQQDYQQYSPAPSAITELSPRTCSGHFEDYCFTTAQSSPQCYPSSRAPFSFPQPDFAETMSYDYPLYPNYMANTQSSKAKARSQSAPKQRPELERQPSRGRRPSVEGRNIPKGAKMQRSSSQIGSAAQKYNYPWSVKLDKSSVSLRESECGSTCSMATNAYYCRSVVSFDPRC Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo01735.1 vs. NCBI nr
Match: gi|902184066|gb|KNA10237.1| (hypothetical protein SOVF_146090 [Spinacia oleracea]) HSP 1 Score: 939.5 bits (2427), Expect = 2.500e-270 Identity = 509/509 (100.00%), Postives = 509/509 (100.00%), Query Frame = 1
BLAST of Spo01735.1 vs. NCBI nr
Match: gi|731364562|ref|XP_010694040.1| (PREDICTED: protein IQ-DOMAIN 32 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 538.1 bits (1385), Expect = 1.700e-149 Identity = 332/518 (64.09%), Postives = 386/518 (74.52%), Query Frame = 1
BLAST of Spo01735.1 vs. NCBI nr
Match: gi|590658409|ref|XP_007034846.1| (Iq-domain 31 isoform 2 [Theobroma cacao]) HSP 1 Score: 391.3 bits (1004), Expect = 2.500e-105 Identity = 265/522 (50.77%), Postives = 343/522 (65.71%), Query Frame = 1
BLAST of Spo01735.1 vs. NCBI nr
Match: gi|590658405|ref|XP_007034845.1| (Iq-domain 31 isoform 1 [Theobroma cacao]) HSP 1 Score: 391.3 bits (1004), Expect = 2.500e-105 Identity = 265/522 (50.77%), Postives = 343/522 (65.71%), Query Frame = 1
BLAST of Spo01735.1 vs. NCBI nr
Match: gi|255552069|ref|XP_002517079.1| (PREDICTED: protein IQ-DOMAIN 14 [Ricinus communis]) HSP 1 Score: 382.1 bits (980), Expect = 1.500e-102 Identity = 263/517 (50.87%), Postives = 333/517 (64.41%), Query Frame = 1
BLAST of Spo01735.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSG7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_146090 PE=4 SV=1) HSP 1 Score: 939.5 bits (2427), Expect = 1.700e-270 Identity = 509/509 (100.00%), Postives = 509/509 (100.00%), Query Frame = 1
BLAST of Spo01735.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E625_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g070100 PE=4 SV=1) HSP 1 Score: 538.1 bits (1385), Expect = 1.200e-149 Identity = 332/518 (64.09%), Postives = 386/518 (74.52%), Query Frame = 1
BLAST of Spo01735.1 vs. UniProtKB/TrEMBL
Match: A0A061ELR1_THECC (Iq-domain 31 isoform 1 OS=Theobroma cacao GN=TCM_020686 PE=4 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 1.700e-105 Identity = 265/522 (50.77%), Postives = 343/522 (65.71%), Query Frame = 1
BLAST of Spo01735.1 vs. UniProtKB/TrEMBL
Match: A0A061EN38_THECC (Iq-domain 31 isoform 2 OS=Theobroma cacao GN=TCM_020686 PE=4 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 1.700e-105 Identity = 265/522 (50.77%), Postives = 343/522 (65.71%), Query Frame = 1
BLAST of Spo01735.1 vs. UniProtKB/TrEMBL
Match: B9RTL0_RICCO (Calmodulin binding protein, putative OS=Ricinus communis GN=RCOM_0911150 PE=4 SV=1) HSP 1 Score: 382.1 bits (980), Expect = 1.100e-102 Identity = 263/517 (50.87%), Postives = 333/517 (64.41%), Query Frame = 1
BLAST of Spo01735.1 vs. ExPASy Swiss-Prot
Match: IQD31_ARATH (Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.600e-6 Identity = 58/186 (31.18%), Postives = 94/186 (50.54%), Query Frame = 1
BLAST of Spo01735.1 vs. ExPASy Swiss-Prot
Match: IQD1_ARATH (Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 2.000e-6 Identity = 32/76 (42.11%), Postives = 51/76 (67.11%), Query Frame = 1
BLAST of Spo01735.1 vs. TAIR (Arabidopsis)
Match: AT4G14750.1 (IQ-domain 19) HSP 1 Score: 193.0 bits (489), Expect = 4.600e-49 Identity = 159/363 (43.80%), Postives = 206/363 (56.75%), Query Frame = 1
BLAST of Spo01735.1 vs. TAIR (Arabidopsis)
Match: AT3G16490.1 (IQ-domain 26) HSP 1 Score: 100.9 bits (250), Expect = 2.400e-21 Identity = 100/263 (38.02%), Postives = 137/263 (52.09%), Query Frame = 1
BLAST of Spo01735.1 vs. TAIR (Arabidopsis)
Match: AT3G22190.1 (IQ-domain 5) HSP 1 Score: 80.5 bits (197), Expect = 3.300e-15 Identity = 59/151 (39.07%), Postives = 83/151 (54.97%), Query Frame = 1
BLAST of Spo01735.1 vs. TAIR (Arabidopsis)
Match: AT4G29150.1 (IQ-domain 25) HSP 1 Score: 80.5 bits (197), Expect = 3.300e-15 Identity = 95/275 (34.55%), Postives = 129/275 (46.91%), Query Frame = 1
BLAST of Spo01735.1 vs. TAIR (Arabidopsis)
Match: AT5G62070.1 (IQ-domain 23) HSP 1 Score: 77.8 bits (190), Expect = 2.200e-14 Identity = 114/402 (28.36%), Postives = 183/402 (45.52%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo01735.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo01735.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo01735.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 2
BLAST of Spo01735.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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