Spo01827.1 (mRNA) | SpinachBase

Overview


Name	Spo01827.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Nuclear transport factor 2 (NTF2) family protein
Location	chr2 : 11586247 .. 11595730 (+)
Sequence length	1265

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTTACACGTATTACATTAACGACCACCGGTACCACACACATTCATCTTCCTCCCACAGACCTGAGAAATCAAAAGTAGTAAAACAATGTCACTCCTTCACACCAACTGCTTCCTCAACTCACCTCATCCCCTTCCCTTCAAACCCAGAAAGCATCATCATCATCTCCTCTCATTTTCACCCTACTTTCTCTCTCCTCCTCCTCCTCCTCCAATTTCTACAACATTCCCCAAAACAACGTACCTTCCTTTTAAACCCTCGGCGTCTCTGCAGCCGGTTTCATTTGTTGATCATAATACTTCTCCTCCATTGATTTCAGCAACTGATGTTGTCAGAAACTTCTATGGCGGTGTCAACCGTCATGATCTTTCCTCAGTTGCGCCCTTAATTGCGGATGATTGTGTTTATGAGGATCTTGTCTTTCTCCGTCCCTTTGTTGGTCGGAAGGTAACATTTTTTGAATTAGTTTATTTATTTGATTGATTTTTCTGTTCAATTAAATTGGTGATTATAATAATCAGTACAATGATTCATAGTGCAAGTGCGAGTAAGATTTTTTTAATTTTTTTTTGATTTTTATGTAAGCTTTAACAAATAGATTAAAAGTTCAGCAAATCACAGTGATAAAGTTCATGGATCAAAACATCCGAAACAAAATCGGGGGCTTGTTCAATAATACATAAATTATAGATTTATAGGTAGCTATGATATCAGTTCTGCACATTTTTGCTAATCTGTAAGCAGCATCTTTGTTAGTGTTCCTTGCCTTAAACTCAAGCCTAATCTCATGCATCCGCATAAAGAGGTCCCTGCATTGTTTAACAATAATGAAGTTAGCATCCTTGATAGTGTCCTTTTGAACAATTCTGGTTATTGCTTGTTGCGAATCCAAATTAACAATCACTCGAGTCCAGCCCCTATCCTCAATAATCTGCAGAGCTGCGAGAAAATGGCTTCCCATAAGAGTTGTTTGAGTGCAGCATTTCTGCAGAAAACCAAGCACCCATACACCAAGGTGATCTCTAGCAATTCCTGCGATACTAGCATCTGATTCCATATCTATAAAAGAGGGCTCACAATTGAATTTGAGCCAACTGGTAGGGGGGTTTCCAAGTGGGGAGGTTGCTTGTGGAATGTAAGGGAGTGTGGTGTTTCCAAGCGAGTGTTTGAGCTTCCAAATGCACCTATCCGTCGAGGTTTGTGTTGGTTAAAGACAAAGGAGTTTCTCCTTTTTCATATGGACTATAGGACCGAGGGAAAACGAGTTCTTCAAGGTACGGAAATGTGAAATGAGGAGGGGGGGGGGGGGGTTGAGTGAGGTTAGAGTGAAGCTAAAACTGAATAGGGGGTTCGAAGAATGAATAATCAACCCTGAGGTGTTGCAAAATTTCTTTCGCTTGATAACAATCCCTAAGAACAAGGAGGATGTTCTCAGGAGCCTCATTACACCAAGCACAAATATTAGAAGGGCAGATATGCCTCCCAAATAGAGCACACTTATGAGGAAGTCTATCATGGAAAGCAACCCATAGAAAAATTATAATTTTGGGAAGAGTATCCGTTTTCAAAATCCATTTCCAAGAGCAATCGAGAGTTGGAATAGAGTTTTGCACATCAGCCATTGCTTTTTGAAAATTAAATTTTTCATTTAAAGTAAACTCTGGAAAAACAAAATCATCTTGAGTTTCTAGTTGCTCATGGAGGGGGGCAGAACCACAAATCTGATTCACACAAGGGGGAAAAGAGAAAGAGAGAGAAGAAAAGTCCCACCTCCCATTTTGGATACAATGACTAACAGAGAGCTCAATCTCACACTCGAATAAAGGCCCATGAATGAGGTTACGAAGAAAAGACCCCCCAACCCACTTACCCTCCCACAAGTTGACACTAACACCGTTCCCAATTCCAAGATATCAGACTTGAACATGACCCATGGCTTTCCACAAGTGAGATCCTTCTTAAAGATGCTATTGGACTTTGAATATTTATCTTTTAAGACCCAGACAACAAAGTTCTCTTCTTGGTGGATCAATCTCCACCATCATTTGAGAGGATGCACTCTATTCAAATCCCTAACACACCTAATTCCTAAGCCCCCTCCTCTTTGGGTTTCGCAATCTTTTCCCAACTTAGTAAATGTAAGCCCCTCTTATCTCGCTCTTTTCTCAACAACTTTTTTTTCCAAACAACTATTAATGGATTTAAGGATAGACTCAGTCAAAAGGAGACATTGCATATAATAATTGGGAACCGTGTTGAGAATAGAGAAGATGAGACACAATCTGCCAGTTTTATGCATAATAAACTGACCCTTGGCCTTGGTGGAACTAGTACCCGAGATTGGAAACCCAAGTACGAGTTAATATCATTTGCCTCTTGAATTTCCAAGGCATCATTGAAGATTGATCTATCACTAGGGATGGTATTTTTTGAGAAAAGAACCCTACTCTTGCCTATGCTTATTGTTTGACCTGAGATTTCACAAAAAGTATCCAGAAAATGCTTAAGGACCGAAATATCCACTTGAAGTTTCTCCAAACAACAAAATATCATCAACCAAACAGGATATGAGAAATAGGGACATGCTTTCTACCCATGCTAAAAGGAGTCCAAGGGAGTTTCTCAACCGACTCATGAATCATTTAAGACAACACCTCCATACATATGATGAAAATATAAGGGGAAAGAGGATCGCCTTGCCGAATGCCCCTCGTTGGGATAAATGAGTCAGAAGGGATGCCATTAACTGAATCCGAGGAGGAGACCGATTAGATACAACTCATAATAAGATTGACATAATGAACACCAAGACCTAATGAACCTCCATTCTAATTTATCATATTGTGATATTGTTAATGTGTTGAATCTGCGGTGTTTCTTGTATGTACTACAATTATGTCAGCCGAAAAATTTATTGTAAGGACATTGTTATGGGCGGACAACGCTGCCTCTGCAATTGGTAAAAGGTACACCCGGTTGTACGTAGCTCTACATGCAACCGGGTAGTTTTGGTTTTTAACCCCTTAAAAAGCACAATTTCAGAGTTTAAAGCACATTTTTACAGGTTAAAGTAAAATATCTTAAAAGCAGATACATTTCAAAAGAACACATTGTTAGTACAAAAGAATATACGAGCGCGAATAATTTGAGAGGATATGTAAACTGATGTTGGTTGCTCACCTTTTAAGTTTAGGTTTTTTTCCCAATTGGAAGAAGATCGATATTCAATATCATAATATTTGAAAAACATATGTGCATTAAAATTGTAAAAATGTGCTTTTAAACTGAAAATGTGCTTTTAAACTGAAAAATGTGCTTTTTTTGAGGGATTAAAAAATACAAAACGATCCGGTTGCACGTAGAGCTACGTACAACCGGGTGTACCTAATAATTTGTGCTGCCTCTGAGTGTCACTTTGTGGCATCCACAACCGGTCCCAAGCCCGGATAAAGGAGGAGGGTTGAGGCAAGCTTGTGGCTGCCAGCGTAAAACATAGTCACATCTTCTGGACATGAATCGAACGGTTCATGTTAGCCGATCCCAATCATTTTTGGGACCAAGGCTTGAAAGAAGAAGAAGAAGAATTTCGACACTATTATGGGCAGGACAACTCAATACTTGCCAAAAGCATGGTTTTGGCACATTCCCACTTTCTTTTTTCTCGGAGGTGGGGGTTTAGAGAAGAAATTTGTTAATTAGTTTTGACATATACTAAATGGAATTGGGTTTGAACTGTGGACATGTAGTTGTGGTAGAAAAGTCTTGGAGCTGAAAAGGCATATTTAAGTAATTTAAGGACGTTTTTTGTGTTCCTCGAAAAAGATAAGGGAGTACTTTGGGAAGAATAAGGTTGACTGTGAAGGAAGGGGGATTCCTTTCTTGTGGAAATGGAAGATACCCTGTGACACTTGTGTTAGGGACTTAGGATCAATGGTTGCAAGCTCCATCATAATTCCGCCAGCATACCTTTGCGCCTTTGCTTTTAGCGCTTGATGTGGCTCCACTTTGCGCCTACTAAACTTGTTTAGACGTGTTCTTCACTTTCCCATTAAACGAGTTCTTTGCTTCACTTTCCTATTATAATTTATTTAGACGTGTTTTTCATTCACCATAGTGCAATTCAGAAATAATCCCTGTTCAATCATCAAATATAAAGGTGAAAGGTTACTACTGATAGATGGAATGGACTGGTGGGCTTGTATATTTCTTCCGAACTTTCCATCCCCTTCACAATCAATTTTGAATGTTTAAAATATGCAAAAAACATCAACTTTCTCTTCTGCACTTTTCAGCTGGCTAGTGACCTTCGAAGAGTCGATTCATAATGGAAATGCAAGGTTAGACCATTTTTAGTGTGTCTTGAGTATGACTGGAGCACTTTTACATATTCCATGAAGTTTCACCTTATCACAGTCCATTTGACTAATGAAGAAGCTCTGATAATCTTCAGTGTGCGTGACCTGCAGATTCATCTTAATTACATAAATTCTCTACCTTTGAACTTTGGAGTTTGTTCAGAAATTGAAGAACCCTGGGATTTTTGAGTCCCTTTTAGAATGTGTACTGATTGTAAATAGTGTGGGTAATCTCATATCTTACAGTTTGCTCTAGTTCTAGACTGAATCGTAGAGGTCCATTAAGCTTGACTGCTGAGATAGCTATTGTGCTTTTTCTGTCGTCAGTTTTATGCGTGCTTGCTCACCTATTAGTATACCACTGATAGGCTGATAGCAATATTATGATCTATGGGTTAAAACAATCCTCCCCCTAGGAAAAAATCACGACCTTTATTTCTCTTTTATCTCAATTCTCAACCTTATTTTCATATTTTTTTCATTATGAAGCTTCACATTTCACTTTCGGGTATCCACAGTCTATCCTGGAGTTCTTCGGGAAGTTTACTGATTATGTCAGCACCAGTTTGCAGTTTGTGATTGATGCTATCTCCGAGGAAGATTCATCTGCTGTTGGTGTGACATGGCATTTGGGTAATAGAAAAAATATTTGAATCTCTTCCTATGTTATCCTTGGTATATTTTGATGGCAACTGACTGAAGAAATACAGAATGGAATGGGCGCCCCTTTCCGTTTAGCAAAGGTTGCAGCTTTTATCAATTGAGGGTAGTAAATGGTATTCGACAAATAATGTAAGGCTGCGTTCTATTCACCTGATTTTCACTTATTTTTTCTGAACTTATTAGAATTTATAAAAACTTATTTTAGTTATAAATTGTACTTGGGTATCCCTTATTTTTCCGGAACTTATCTTATCTGAAGTTATTTTAACTAAAATAAGTGAAAATATGGTGAACAAAACAGAACCTAAGTATCAATTTTTCCAGGATACAACTATCTGGAATCTGGATATTCATTATTGTATACATAATGATTTGAACTGGCGTGGTACTTATTTGCTATAGTTGATGTTCCTCTCCTCTCGAGGAAGAGAAGGGGTGGGGGGCAGAAATAGGGGTGCGTTGCTGAATCTCGTTAGGTATCTTATAATTTTCTGTTTTGTAATTCGACTATCTTCTTACATTGTACAGTAAATATTCACCTTCTCATAGGGTCAAAAGATTGCTCACCTGTTGAACATGCTTTGCTCATCACGAGTAAAACTTTTCAAGAAATTGTAAGCCTGCTCTCAAATTTTAGAAGCTTCAGTGAGTGTTTGTTGGGTACAATCAGGGGTTTTAGAAATCTTTTTTCCTTTTCTGCTATGGGATGGAGTCTATTCTGGTCAAGAATCTAATCTCCTTGTCCAGATTTAGGAGTACATTGTCAGATTTCCTTATATTACGTAATTTGATAGAACATGACTTTACAAAATACGAATGCAAGTAACCTTTATAATAGTTGTCAGTTGTGCCATTATTATCCACTCTCTACTTATTTTTAGTGATAAACCATTACTTTCTAGGAAAGATAACTCTTCCAAATCTTTACGTGAATGTTTCTCTGTGTCTAAAACAGTTATGCTCGAGATAGCGTGGAACCTGCAGTTAAACCTGGAGAATCAGCTTTGGTAAGTTAATTTATTCTTTCAATGATCTAATTTCCTGCCTTCATTATGTGGACCTAATATCATGACAACCAAACAAATCATTTTTTTTTTTTTTTTTGGATAAGCAAGAGAAAATTTTGTATTACTTTGTCAAAAAGAATTTACAACCTAAACAAGCAAAGAAGGAAAGCGAACCTTCTAGGAAGGACCCCCTATTCCTAGACACTTGTAAAACTATAGTAGAGACTTAAACAAAGTCTCCTACATACACCAGCTTTCTAACTATGACAAACAATGCTACTTACAAAGAATTAAGCCTATCTTTATCTATATTTCTGGCTGTACTATTTAAAACAAGGTATGCTCTAGACTTTACAAAGTATTGTATCTGCTGTATTGTTTTGTCCAACATAGGAACCTTCAGGTTGAGGAGGCTTCCAATTTTTATTTTTTATGTAGACATTATGCACCCATTTAACCCACAGATTATACACCTTTTACGCAAGGCCCACACATGCTTTCCTATTGCAGCTTGATTCCAAAGTAGAATGTTCTTAATACACCATGTAACCATGTTTATTACCCTTACTAACACCATGCCAGAAAACATTATTGATCTTCTGCTGAACCGTCTTTGGGAGTAGAAAAATCTGACTCTAGTGAACACAAACACTCATTAGGAATGAATTAACCAGTTGAAGCCTTCCTTCTTATGACAGGTGTTTAGTGCTCCAAATTCATACTCTTGTACACATTTTATCAACCAGGGCTTCACAATCAGCAACTTTAATTTTGTAAGCGCTCATGGGCAAACCCAGGTATCTAATTGGGAGCATACCTATCTTGAACCCAAAAACTCTATTTATCCTGTTTATTTCATGACTTTCCATCCCAGTACAATAGATTTCAGATTTGCTAGCATTAATATGTAACCCGTTAGTCTCAGAAAATAGTTTGAAACCTCCTAGCGCCATACTTACTGAAACCCTAGGGCACGCATCATCTCTTCTATGAAACCCCATTCCGCTGTATCTTAGGCTTTCCTTAAATCTAGTTTTAAATACAACACGCTTGTTTTTGACAACCCTTTTCACCAAATCTTGACACAGTAAGACATTTTGCATTATATTCCTTCTCGTGATGAAAGCACCTTTGGTAGGGCTGATGATATCAGGAAGGACATCATTTAGCTTTTCACAGAGAAGCTTGGTGATTCACTTGTAGATAGTAATATAGTAGAACAACATGCCATTGGTCTAAAGTCCCCTGCTGTATTAGGCACTAAGATTACAGTGGTGATGTTGAGTTAAGTAAGCATTTTACCTGTAATCATTGCATCAGCCACGTCGTTCCCAACAGTTTGCCACATAACTCCTTGAAAAAATGACTGTTGTAGCCATCTAATCCAGGCGCCTTATTTCCAGGAATGGCAAACGTAACTCTTTTGACATCCTTTCTGGTGAAATTACAGTTGAGCAAAGAAAGATCTTCATCACTAAGAGTTTCCCCTTGATTCGCTTTGTTTGTCAAAACAGTTGTTATGTTCTGTTCTCTATTCTTACTCCTAGTAAATTCTGATAAAAAGCTTTAGATACTTCAGCAGGAGTTTCCACCCATTCCCCTTGTTCATTACGGATTCCATTTATAGCATTTCTCACTTTTCTGGCCTTTATGCTGTTATATAAGAGCTTTGAATTTTCATCACCCTCCCTTAACTAGTGAAGTTTAGTTTTTTGTTTCAGTAAAGCATTATAGTTATTTAGAGCATACTCGAGGCATCATAAGCTTTCCTTTCATTTTTGTTTATCTCCACATTGCCCGGAATTTATGCATTTGATCTTGAATTTGCAATAACTCCTGCTTTGTTCTGATTTTTCTGCCTGCAAGGTGTCATGCCCCCTTGTGTCTAGAGCTTTAAGCTCATGTTTCAAAACCTTCAGTTTTGAGATTACTTGAAACACTCTGCAACTCCTGACCTTTGTATTCCAGCATTTTAAATGCTACAATTTCGTTGAATATCTCGTTAAAACACCAGTAATTAAAAGAACCTAAATGGCTTCTTCACAGAATCTCATTTCACTAACACATAGAAAACTCTATGAGCAAAGATGGATCTCCCTTGGGATCCTATGTTGCTCAGAAACGGATTTAAGTGTCATACACCAGTGGCTGGAGTGTCGACCTCCGATGCAAAATTTTGCCGACACGGCGATACAGTCAAATCAGTGTCTTGATTCTTGACTAGTTCTTTAGACATAGCTATCATATCATATAAAGTGCCGGAAAATTCCTACCCCTATTAGTTTAATATGTAAAAATAAGAAAGAAAAGAAAAAAAGGAGGGCACTTAGTTAACTCTCAGTTTTTTTTTTTTTTTTNAAAATAAGAAAGAAAAGAAAAAAAGGAGGGCACTTAGTTAACTCTCAGTTTTTTTTTTTTTTTTACTTTAGAGCTTTTTGGTCCAGGTAATATCTGGTAAGATTAATCTATTCACCGATGATGATTCATCTTTATCTTGGATATCACAAGTTAAACTTTTTTGCTCTATTTTTTTCTTCTCTTTTGATATCGGCACTTGATTTCGTATCCTTTTGCCGACACGGGTGTCAAACACTTTCTCGGACACTACCTGCTGAAAAATGTCATGTCATGTCGAAACCGACTCTCCCGGCCAACAAGGTGTCGAAGTAACATAGCTTGGATCCATTCGCGCAAAAGATCCTTATCCAAAAATGTTAGCAATGTAGTTAGTTGCCATTATAAGAAATTATTCTGACATGATTATTTACAGATTGCTATCAGAGGTGTTACATGGCTGCTGCAGAAATTCCCCAAGCTTGCAGAGCGGTTATAAAGTTATGATAAATAACAGTGGGAAATCAATCACCGCATGGCTTTGGGGTAATTTAGGCTCTGTTTTATTCGACTTTAAAATTTGTCCTAAAATTCTATGTTGTGTGCGTAGTAGAGCTTATTTTCTACTTATCTGCGCTTATTTTGTCGCTAAATCTAACAAAACAGGGCCATACTCGTAGGTTTTTGCAACTTCTTAACAGAAACAGGGAGCGAAGGTACCGATGCATGCTATGAAAGCAATTCCTTGAATATTGGCGAGCATAATAAGGTTTGCAACTGGTCATGTATACACGGTCATTTTGTATAGTTTGAAAGGGGAAAAGGAAAGAACCACGAGCTAGAAACCCCTTATATATCTCCTTTGTATAAGCATGTTTCCTTGTAATTAATTTGTACGGGCATGGTTCATAGCCTCATATAGTGTAGCAGTGGATCAATTTTTGTTTTGTTTTGAAAGGCAAGTAGAAAAGTACATTAAGAGTCCCTCTGTTCGTAAGAAATCACTATCTAAAATTGAAAGTAACTAAGAACCATTACAAGTGTCGGAACATTTGTAATTCAATTTGCTGCAATGCTGCTCGATTTGCTTCTTTGTAGTATTTGATATCCTATTCTTCAAAAAAAA

mRNA sequence

CGTTACACGTATTACATTAACGACCACCGGTACCACACACATTCATCTTCCTCCCACAGACCTGAGAAATCAAAAGTAGTAAAACAATGTCACTCCTTCACACCAACTGCTTCCTCAACTCACCTCATCCCCTTCCCTTCAAACCCAGAAAGCATCATCATCATCTCCTCTCATTTTCACCCTACTTTCTCTCTCCTCCTCCTCCTCCTCCAATTTCTACAACATTCCCCAAAACAACGTACCTTCCTTTTAAACCCTCGGCGTCTCTGCAGCCGGTTTCATTTGTTGATCATAATACTTCTCCTCCATTGATTTCAGCAACTGATGTTGTCAGAAACTTCTATGGCGGTGTCAACCGTCATGATCTTTCCTCAGTTGCGCCCTTAATTGCGGATGATTGTGTTTATGAGGATCTTGTCTTTCTCCGTCCCTTTGTTGGTCGGAAGTCTATCCTGGAGTTCTTCGGGAAGTTTACTGATTATGTCAGCACCAGTTTGCAGTTTGTGATTGATGCTATCTCCGAGGAAGATTCATCTGCTGTTGGTGTGACATGGCATTTGGAATGGAATGGGCGCCCCTTTCCGTTTAGCAAAGGTTGCAGCTTTTATCAATTGAGGGTAGTAAATGGTATTCGACAAATAATTTATGCTCGAGATAGCGTGGAACCTGCAGTTAAACCTGGAGAATCAGCTTTGATTGCTATCAGAGGTGTTACATGGCTGCTGCAGAAATTCCCCAAGCTTGCAGAGCGGTTATAAAGTTATGATAAATAACAGTGGGAAATCAATCACCGCATGGCTTTGGGGGCCATACTCGTAGGTTTTTGCAACTTCTTAACAGAAACAGGGAGCGAAGGTACCGATGCATGCTATGAAAGCAATTCCTTGAATATTGGCGAGCATAATAAGGTTTGCAACTGGTCATGTATACACGGTCATTTTGTATAGTTTGAAAGGGGAAAAGGAAAGAACCACGAGCTAGAAACCCCTTATATATCTCCTTTGTATAAGCATGTTTCCTTGTAATTAATTTGTACGGGCATGGTTCATAGCCTCATATAGTGTAGCAGTGGATCAATTTTTGTTTTGTTTTGAAAGGCAAGTAGAAAAGTACATTAAGAGTCCCTCTGTTCGTAAGAAATCACTATCTAAAATTGAAAGTAACTAAGAACCATTACAAGTGTCGGAACATTTGTAATTCAATTTGCTGCAATGCTGCTCGATTTGCTTCTTTGTAGTATTTGATATCCTATTCTTCAAAAAAAA

Coding sequence (CDS)

ATGTCACTCCTTCACACCAACTGCTTCCTCAACTCACCTCATCCCCTTCCCTTCAAACCCAGAAAGCATCATCATCATCTCCTCTCATTTTCACCCTACTTTCTCTCTCCTCCTCCTCCTCCTCCAATTTCTACAACATTCCCCAAAACAACGTACCTTCCTTTTAAACCCTCGGCGTCTCTGCAGCCGGTTTCATTTGTTGATCATAATACTTCTCCTCCATTGATTTCAGCAACTGATGTTGTCAGAAACTTCTATGGCGGTGTCAACCGTCATGATCTTTCCTCAGTTGCGCCCTTAATTGCGGATGATTGTGTTTATGAGGATCTTGTCTTTCTCCGTCCCTTTGTTGGTCGGAAGTCTATCCTGGAGTTCTTCGGGAAGTTTACTGATTATGTCAGCACCAGTTTGCAGTTTGTGATTGATGCTATCTCCGAGGAAGATTCATCTGCTGTTGGTGTGACATGGCATTTGGAATGGAATGGGCGCCCCTTTCCGTTTAGCAAAGGTTGCAGCTTTTATCAATTGAGGGTAGTAAATGGTATTCGACAAATAATTTATGCTCGAGATAGCGTGGAACCTGCAGTTAAACCTGGAGAATCAGCTTTGATTGCTATCAGAGGTGTTACATGGCTGCTGCAGAAATTCCCCAAGCTTGCAGAGCGGTTATAA

Protein sequence

MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSASLQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRKSILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRVVNGIRQIIYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo01827	Spo01827	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo01827.1	Spo01827.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01827.1.exon.1	Spo01827.1.exon.1	exon
Spo01827.1.exon.2	Spo01827.1.exon.2	exon
Spo01827.1.exon.3	Spo01827.1.exon.3	exon
Spo01827.1.exon.4	Spo01827.1.exon.4	exon
Spo01827.1.exon.5	Spo01827.1.exon.5	exon
Spo01827.1.exon.6	Spo01827.1.exon.6	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01827.1.utr5p.1	Spo01827.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01827.1.CDS.1	Spo01827.1.CDS.1	CDS
Spo01827.1.CDS.2	Spo01827.1.CDS.2	CDS
Spo01827.1.CDS.3	Spo01827.1.CDS.3	CDS
Spo01827.1.CDS.4	Spo01827.1.CDS.4	CDS
Spo01827.1.CDS.5	Spo01827.1.CDS.5	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01827.1.utr3p.1	Spo01827.1.utr3p.1	three_prime_UTR
Spo01827.1.utr3p.2	Spo01827.1.utr3p.2	three_prime_UTR

Homology

[Close]

BLAST of Spo01827.1 vs. NCBI nr
Match: gi|902172830|gb|KNA08172.1| (hypothetical protein SOVF_165030 isoform A [Spinacia oleracea])

HSP 1 Score: 461.5 bits (1186), Expect = 8.600e-127
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1


		  
Query: 1   MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSAS 60
           MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSAS
Sbjct: 1   MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSAS 60

Query: 61  LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRK 120
           LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRK
Sbjct: 61  LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRK 120

Query: 121 SILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRVVN 180
           SILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRVVN
Sbjct: 121 SILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRVVN 180

Query: 181 GIRQIIYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL 224
           GIRQIIYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL
Sbjct: 181 GIRQIIYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL 223

[Close]

BLAST of Spo01827.1 vs. NCBI nr
Match: gi|902172831|gb|KNA08173.1| (hypothetical protein SOVF_165030 isoform B [Spinacia oleracea])

HSP 1 Score: 433.3 bits (1113), Expect = 2.500e-118
Identity = 214/236 (90.68%), Postives = 218/236 (92.37%), Query Frame = 1


		  
Query: 1   MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSAS 60
           MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSAS
Sbjct: 1   MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSAS 60

Query: 61  LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRK 120
           LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRK
Sbjct: 61  LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRK 120

Query: 121 SILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLR--- 180
           SILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLR   
Sbjct: 121 SILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRGQK 180

Query: 181 VVNGIRQI----------IYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL 224
           + + +  +           YARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL
Sbjct: 181 IAHLLNMLCSSRVKLFKKFYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL 236

[Close]

BLAST of Spo01827.1 vs. NCBI nr
Match: gi|731362233|ref|XP_010692783.1| (PREDICTED: uncharacterized protein LOC104905846 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 289.3 bits (739), Expect = 5.900e-75
Identity = 151/227 (66.52%), Postives = 172/227 (75.77%), Query Frame = 1


		  
Query: 1   MSLLHTNCFLNSPHPLPFKPRKHH----HHLLSFSPYFLSPPPPPPISTTFPKTTYLPFK 60
           MS +H+NC L     +  KPR H+    HHLL  S +       PP S+T  +   + F+
Sbjct: 1   MSHVHSNCCLTFTARITSKPRNHNQHHNHHLLHLSLF-------PPNSSTVSRKRGITFR 60

Query: 61  PSAS--LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLR 120
            S    L P+S +D      LI A+D+VRNFYGG+NRHDL+SV PLIA +CVYEDLVF  
Sbjct: 61  ASLDNPLPPIS-LDQTNPFQLIPASDIVRNFYGGINRHDLASVEPLIAPNCVYEDLVFPS 120

Query: 121 PFVGRKSILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFY 180
           PFVGRKSILEFFGKF DYVST LQFVIDAISEEDS+ VGVTWHLEW GRPFPFSKGCSFY
Sbjct: 121 PFVGRKSILEFFGKFIDYVSTDLQFVIDAISEEDSTTVGVTWHLEWKGRPFPFSKGCSFY 180

Query: 181 QLRVVNGIRQIIYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAE 222
           +L + NGIRQIIYARDSVEPA+KPGESALIAIRGVTWLLQ+FPKLAE
Sbjct: 181 RLGIKNGIRQIIYARDSVEPAIKPGESALIAIRGVTWLLQRFPKLAE 219

[Close]

BLAST of Spo01827.1 vs. NCBI nr
Match: gi|1009137378|ref|XP_015886021.1| (PREDICTED: uncharacterized protein LOC107421316 [Ziziphus jujuba])

HSP 1 Score: 248.4 bits (633), Expect = 1.100e-62
Identity = 124/195 (63.59%), Postives = 144/195 (73.85%), Query Frame = 1


		  
Query: 34  FLSPPPPPPISTTFPKTTYLPFKPSAS-----LQPVSFVDHNTSPPLISATDVVRNFYGG 93
           F +P P P + T  P TT      SA        P + VD +    + SA DVVR FYGG
Sbjct: 34  FSTPTPTPLLRTWSPPTTCFRLSSSAERTVSVASPATDVDDDEEGSVDSAADVVRKFYGG 93

Query: 94  VNRHDLSSVAPLIADDCVYEDLVFLRPFVGRKSILEFFGKFTDYVSTSLQFVIDAISEED 153
           +N HDL+SV  LIAD CVYEDLVF RPFVGR+ IL+FF  F   VS  LQFVID +S ED
Sbjct: 94  INAHDLASVEELIADKCVYEDLVFPRPFVGREDILQFFKNFIGSVSKDLQFVIDKLSTED 153

Query: 154 SSAVGVTWHLEWNGRPFPFSKGCSFYQLRVVNGIRQIIYARDSVEPAVKPGESALIAIRG 213
           SSAVGVTWHLEW G+PFPFS+GCSFY+L V+NG RQIIY RDSVEPA+KPGE+AL+AIRG
Sbjct: 154 SSAVGVTWHLEWKGKPFPFSRGCSFYELEVINGKRQIIYGRDSVEPAIKPGETALVAIRG 213

Query: 214 VTWLLQKFPKLAERL 224
           VTWLLQ+FP+LA+RL
Sbjct: 214 VTWLLQQFPQLADRL 228

[Close]

BLAST of Spo01827.1 vs. NCBI nr
Match: gi|970062861|ref|XP_015058340.1| (PREDICTED: uncharacterized protein LOC107004593 [Solanum pennellii])

HSP 1 Score: 243.8 bits (621), Expect = 2.800e-61
Identity = 115/149 (77.18%), Postives = 129/149 (86.58%), Query Frame = 1


		  
Query: 75  LISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRKSILEFFGKFTDYVS 134
           L SA  VVR FY G+NR DL SV  LIA+DCVYEDLVF +PFVGRK+IL+FF KFTD V 
Sbjct: 79  LESAASVVRKFYAGINRRDLDSVEELIAEDCVYEDLVFPQPFVGRKAILDFFKKFTDSVG 138

Query: 135 TSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRVVNGIRQIIYARDSVEP 194
           + LQFVID IS+EDSSAVGVTWHLEW GRPFPFSKGCSFY+L VVNG R+I+Y RDSVEP
Sbjct: 139 SDLQFVIDDISKEDSSAVGVTWHLEWRGRPFPFSKGCSFYRLEVVNGQRKILYGRDSVEP 198

Query: 195 AVKPGESALIAIRGVTWLLQKFPKLAERL 224
           AVKPGE+AL+AIRGV WLLQKFP+LA+RL
Sbjct: 199 AVKPGETALVAIRGVAWLLQKFPQLADRL 227

[Close]

BLAST of Spo01827.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QLQ8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_165030 PE=4 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 6.000e-127
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1


		  
Query: 1   MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSAS 60
           MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSAS
Sbjct: 1   MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSAS 60

Query: 61  LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRK 120
           LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRK
Sbjct: 61  LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRK 120

Query: 121 SILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRVVN 180
           SILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRVVN
Sbjct: 121 SILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRVVN 180

Query: 181 GIRQIIYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL 224
           GIRQIIYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL
Sbjct: 181 GIRQIIYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL 223

[Close]

BLAST of Spo01827.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QNA8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_165030 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 1.700e-118
Identity = 214/236 (90.68%), Postives = 218/236 (92.37%), Query Frame = 1


		  
Query: 1   MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSAS 60
           MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSAS
Sbjct: 1   MSLLHTNCFLNSPHPLPFKPRKHHHHLLSFSPYFLSPPPPPPISTTFPKTTYLPFKPSAS 60

Query: 61  LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRK 120
           LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRK
Sbjct: 61  LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRK 120

Query: 121 SILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLR--- 180
           SILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLR   
Sbjct: 121 SILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRGQK 180

Query: 181 VVNGIRQI----------IYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL 224
           + + +  +           YARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL
Sbjct: 181 IAHLLNMLCSSRVKLFKKFYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAERL 236

[Close]

BLAST of Spo01827.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BHP0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g022630 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 4.100e-75
Identity = 151/227 (66.52%), Postives = 172/227 (75.77%), Query Frame = 1


		  
Query: 1   MSLLHTNCFLNSPHPLPFKPRKHH----HHLLSFSPYFLSPPPPPPISTTFPKTTYLPFK 60
           MS +H+NC L     +  KPR H+    HHLL  S +       PP S+T  +   + F+
Sbjct: 1   MSHVHSNCCLTFTARITSKPRNHNQHHNHHLLHLSLF-------PPNSSTVSRKRGITFR 60

Query: 61  PSAS--LQPVSFVDHNTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLR 120
            S    L P+S +D      LI A+D+VRNFYGG+NRHDL+SV PLIA +CVYEDLVF  
Sbjct: 61  ASLDNPLPPIS-LDQTNPFQLIPASDIVRNFYGGINRHDLASVEPLIAPNCVYEDLVFPS 120

Query: 121 PFVGRKSILEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFY 180
           PFVGRKSILEFFGKF DYVST LQFVIDAISEEDS+ VGVTWHLEW GRPFPFSKGCSFY
Sbjct: 121 PFVGRKSILEFFGKFIDYVSTDLQFVIDAISEEDSTTVGVTWHLEWKGRPFPFSKGCSFY 180

Query: 181 QLRVVNGIRQIIYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAE 222
           +L + NGIRQIIYARDSVEPA+KPGESALIAIRGVTWLLQ+FPKLAE
Sbjct: 181 RLGIKNGIRQIIYARDSVEPAIKPGESALIAIRGVTWLLQRFPKLAE 219

[Close]

BLAST of Spo01827.1 vs. UniProtKB/TrEMBL
Match: K4D832_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 9.800e-61
Identity = 114/149 (76.51%), Postives = 128/149 (85.91%), Query Frame = 1


		  
Query: 75  LISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRKSILEFFGKFTDYVS 134
           L SA  VVR FY G+NR DL SV  LIA+DCVYEDLVF +PFVGRK+IL+FF KFTD V 
Sbjct: 79  LESAASVVRKFYAGINRRDLDSVEELIAEDCVYEDLVFPQPFVGRKAILDFFKKFTDSVG 138

Query: 135 TSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRVVNGIRQIIYARDSVEP 194
           + LQFVID IS+EDSSAVGVTWHLEW GRPFPFSKGCSFY+L VVNG  +I+Y RDSVEP
Sbjct: 139 SDLQFVIDDISKEDSSAVGVTWHLEWRGRPFPFSKGCSFYRLEVVNGQMKILYGRDSVEP 198

Query: 195 AVKPGESALIAIRGVTWLLQKFPKLAERL 224
           AVKPGE+AL+AIRGV WLLQKFP+LA+RL
Sbjct: 199 AVKPGETALVAIRGVAWLLQKFPQLADRL 227

[Close]

BLAST of Spo01827.1 vs. UniProtKB/TrEMBL
Match: B9IQB1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s10370g PE=4 SV=2)

HSP 1 Score: 239.6 bits (610), Expect = 3.700e-60
Identity = 113/152 (74.34%), Postives = 130/152 (85.53%), Query Frame = 1


		  
Query: 72  SPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRKSILEFFGKFTD 131
           +P + SA+DVVR+FY G+N HDL SV  LIA++CVYEDL+F RPFVGRK+ILEFF KF D
Sbjct: 64  APSVESASDVVRSFYEGINGHDLDSVEELIAENCVYEDLIFPRPFVGRKAILEFFNKFID 123

Query: 132 YVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRVVNGIRQIIYARDS 191
            VS  LQFVID IS EDS AVGVTWHLEW G+ FPFSKGCSFY+L  VNG RQIIY RDS
Sbjct: 124 TVSKDLQFVIDDISNEDSFAVGVTWHLEWKGKSFPFSKGCSFYRLDAVNGKRQIIYGRDS 183

Query: 192 VEPAVKPGESALIAIRGVTWLLQKFPKLAERL 224
           VEPAVKPGE+AL+AIRGVTWLLQ+FP+LA++L
Sbjct: 184 VEPAVKPGEAALVAIRGVTWLLQRFPQLADQL 215

[Close]

BLAST of Spo01827.1 vs. TAIR (Arabidopsis)
Match: AT1G71480.1 (Nuclear transport factor 2 (NTF2) family protein)

HSP 1 Score: 225.7 bits (574), Expect = 2.800e-59
Identity = 115/191 (60.21%), Postives = 140/191 (73.30%), Query Frame = 1


		  
Query: 32  PYFLSPPPPPPISTTFPKTTYLPFKPSASLQPVSFVDHNTSPPLISATDVVRNFYGGVNR 91
           P  L+   PP +S ++         P+A     + V   T+P   SA++VV +FY  VN 
Sbjct: 35  PTSLTHSQPPRLSASYG--------PAAKAATANDVVPETAPT--SASEVVSSFYAAVNV 94

Query: 92  HDLSSVAPLIADDCVYEDLVFLRPFVGRKSILEFFGKFTDYVSTSLQFVIDAISEEDSSA 151
           HDLSSV  LIA DCVYEDLVF  PFVGRK+IL+FFGKF +  ST LQFVID IS EDSSA
Sbjct: 95  HDLSSVTDLIAQDCVYEDLVFSSPFVGRKAILDFFGKFIESTSTDLQFVIDDISTEDSSA 154

Query: 152 VGVTWHLEWNGRPFPFSKGCSFYQLRVVNGIRQIIYARDSVEPAVKPGESALIAIRGVTW 211
           VGV+WHLEW G+ FPFSKGCSFY+L V++G RQI+Y RD VEPA+KPGE+ L AI+GVTW
Sbjct: 155 VGVSWHLEWKGKNFPFSKGCSFYRLEVIDGKRQIVYGRDCVEPAIKPGETVLAAIKGVTW 214

Query: 212 LLQKFPKLAER 223
           LLQKFP+LA++
Sbjct: 215 LLQKFPQLADQ 215

[Close]

BLAST of Spo01827.1 vs. TAIR (Arabidopsis)
Match: AT5G41470.1 (Nuclear transport factor 2 (NTF2) family protein)

HSP 1 Score: 121.7 bits (304), Expect = 5.700e-28
Identity = 57/159 (35.85%), Postives = 88/159 (55.35%), Query Frame = 1


		  
Query: 64  VSFVDH-NTSPPLISATDVVRNFYGGVNRHDLSSVAPLIADDCVYEDLVFLRPFVGRKSI 123
           VS +D  N+ P  IS  D V  FY  +N  +   ++  I+ DC  +D  F +PF G++  
Sbjct: 60  VSCLDRPNSRPNQISGYDAVMKFYSSINEKNQDQLSSCISSDCFIDDFSFPKPFRGKQEA 119

Query: 124 LEFFGKFTDYVSTSLQFVIDAISEEDSSAVGVTWHLEWNGRPFPFSKGCSFYQLRVVNGI 183
           +EFF +    +  +++F ++ + E D  +  V WHLEW GR  PF++GCSFY+     G 
Sbjct: 120 MEFFEELVKSMGQNVKFCVENVCEGDGHSAAVNWHLEWKGRKIPFTRGCSFYEFIDEGGR 179

Query: 184 RQIIYARDSVEPAVKPGESALIAIRGVTWLLQKFPKLAE 222
             I  AR  +E  +KPG   L  ++ +T+L  +FPK AE
Sbjct: 180 LVIRNARILIESPIKPGGITLSLLKNITFLFDEFPKGAE 218

The following BLAST results are available for this feature:

BLAST of Spo01827.1 vs. NCBI nr
BLAST of Spo01827.1 vs. UniProtKB/TrEMBL
BLAST of Spo01827.1 vs. ExPASy Swiss-Prot
BLAST of Spo01827.1 vs. TAIR (Arabidopsis)

BLAST of Spo01827.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902172830\|gb\|KNA08172.1\|	8.6e-127	100.	hypothetical protein SOVF_1650...	[more]
gi\|902172831\|gb\|KNA08173.1\|	2.5e-118	90.6	hypothetical protein SOVF_1650...	[more]
gi\|731362233\|ref\|XP_010692783.1\|	5.9e-75	66.5	PREDICTED: uncharacterized pro...	[more]
gi\|1009137378\|ref\|XP_015886021.1\|	1.1e-62	63.5	PREDICTED: uncharacterized pro...	[more]
gi\|970062861\|ref\|XP_015058340.1\|	2.8e-61	77.1	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo01827.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QLQ8_SPIOL	6.0e-127	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9QNA8_SPIOL	1.7e-118	90.6	Uncharacterized protein OS=Spi...	[more]
A0A0J8BHP0_BETVU	4.1e-75	66.5	Uncharacterized protein OS=Bet...	[more]
K4D832_SOLLC	9.8e-61	76.5	Uncharacterized protein OS=Sol...	[more]
B9IQB1_POPTR	3.7e-60	74.3	Uncharacterized protein OS=Pop...	[more]

BLAST of Spo01827.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo01827.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G71480.1	2.8e-59	60.2	Nuclear transport factor 2 (NT...	[more]
AT5G41470.1	5.7e-28	35.8	Nuclear transport factor 2 (NT...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009959	Polyketide cyclase SnoaL-like domain	PFAM	PF12680	SnoaL_2	coord: 82..177 score: 8.9
None	No IPR available	PANTHER	PTHR33698	FAMILY NOT NAMED	coord: 77..223 score: 4.5
None	No IPR available	PANTHER	PTHR33698:SF3	SUBFAMILY NOT NAMED	coord: 77..223 score: 4.5

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015996	chlorophyll catabolic process
biological_process	GO:0006606	protein import into nucleus
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008565	protein transporter activity