Spo01952.1 (mRNA) | SpinachBase

Overview


Name	Spo01952.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Transcription elongation factor-related family protein
Location	SpoScf_01477 : 4531 .. 9578 (-)
Sequence length	3404

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTCCATGTTATTTCTGATATCTTCCCTTATCTTTCTCTCTAGATTTTCTCTCTTTCTTTATTTTCTCATAAATACAAATAATAATAAATAAATCCGATTTGCAATATTATTTTTAATTCCTTGTTTTTAATTATTTATTTCCAAATAAACAAATTTGGGAGAGAGAAAAAGAGAAGAAGAGGATCAAGTCAAAAGAGAGGGGCCAAAATCCATTTAATTCTCTCAATTCCCAATTTTAATTATTAAATATTTATTTATCCCCTCTCTTTTTCTTATTTTTCTATCTCTTCCTCTCACTTTCCTCTTCTTTTGTCTAATTATTATTCCTACCAAAACTAAAATTCCAGTCAAAAATTTCCCAGAAGAACAAATTACATACTTTGGGTTTCCCATTCTTCTCTGAAACTCCTAAAATTAGTCGAAAGTAGAACTCCAATTTAATAATTAATATTTTAATTTAGCTTATTAATAAGAATAATAAGGTCTTTGTAATTAATTACTACTTTTAATTAATCTTCTTCTGGATTGAGTTGGGTTGTTGCTTCATTGCTTGCATTTGTTGTTCAACTGCTCCGCCTTTTTTTTTTTTTTTTATAATTTTTTTTTATAATTTTAATTGCCATCTCTTCAAACTCACTTCAATCTTCATCTTCTTACAGAAGGAGAAGATACAGAGTTTTATTTTTGGGGTTTTATTATTTATTTTTATACGAGTATATTTTATTTTAATAAAATATTCTTGCGTAAAAGGTTAATCCCAAATCAGAAAAAAAAATCCATTGAGTTTCTATTCTATTCCGATTCCCTTTTTTTTTGGGGTTCTGATCGTATTCGCTTGATCGAATAATTTCTCCCCAAAAACATTTTCCCGAAATATTTTTTTCTGGAATTTTGATAATCTAGGCAATCGAATTTCGAGATTTTGACAACTGGGTATTGATTGAAACAAGTTTTGAGGATCTGGGTGATTGAAAATTCGATCAAAATGACCTCAAAACCAGGTGGTCATAACAGCAATGGTTGTAATAATAACGATGGAGGAGTTGGCCTTGAGAATTGGAGGGATTATTTCAGGAGAGCAAACTCTGATATATTCGATATAATCGAGCACGCAATAATGGTGGCTGCGTCAGATTGTCCCAAGGAGTTCCGAGTTAGGAGAGAGAAAATTGCTGAGTTACTCTTCACATGTAGATTGACTCGGTGTTTAGGGTGTGACCGCGTCGAGCTAGCTGTTTCTGAGGTTGATGATGGTGAAGGTGAGGTTAAGGTGGTGATTAAAGGGGTTAATGATCAGTTTAATGTTGTTGATGATGATGTTAATGGTGGTGGTGGGAGTAAAGGGAGTAAGGTAAATAGTACAACTAGGGAGAATAATTATGATCAGGGTGTTAATAGTGATCGTGATCATATTGGTGAGATGGAGATTGATATGATGTTGAATGAGTTGAATCATGAGAGTAATTTTACTTTTGATGATGCTGAGGCTTTGACGAATGAGATTGAAGAAGCTAAAGAGGTTGCTGAGGAGGTTTTGAGGATCAAAGAGATACTTCTTAACAGCCAAGATGAGGTAGATTTCTAGAGAAAATTTTCGGGTTTTTGATTTGGTCGAATTTGGTTGTTTAGTTGTGTTTGATAATAGTATTATGATGTTAGTTTAATGAGATTGATGCTAGGAATTAGTCAATTGTGATTTTGGTTGAAGCTTTTTTTACTAGGGTTTTCTAACTTGTGGCTGTTATTGCAACTGTTTATTGCAGTCTGATTCAGTGTTGTTCGAGTCATTAAGGAGGCTGCAATTGATGGCTTTGGATGTTGATCTGCTAAAGGTTTGACATCGAGCTCTTTGTTGTTGATGATTATCAATTTGCCTTCTAAATTTTTGGACTAGGTTTTCTTGCTCTTGCTTTGATTGAATGATGTTCTTATGGCAATTATGCTGGTTTCAGTCAACGGAGATTGGGAAGGCTGTTAACCGCATTAGAAGACATAGTTCAAAGGATATTCGCCATCTTGCTCGAGCGTTAATAGAGTACGACACTTTCACTCTGTGTGTTGTCCATTGCATGTTGGTATGCTTTGTGTTCTTGCTACTGTGAATGAATGATGATCAGTGTTGTGTTTAATCCAAGAGCTTATCAAGTTGGTTTAATAGTGTTGCCACTATGATTAATTAGTTCTGCTGCTTTTGTTTAAGAGTTTTTGAGTGTTTGTTAAAACTATCCAAAATGCATTTGTAGACATGAAACAGCAAGCAAAAGTGCTGTATGATTCTATCTGATTTCCTACTCTGAAGAGCTCTAAGAATCTATGAACCGTGATTGTTGCATGTTTTAGTTAAGACACAGTTATTAGCTGTTAAAATTTCGATAGTGCTTCCCTTTCAAATTTGAACATGTTCGAATCTACGTAACGTGATGGTTGTTTTAAGTTAACCACTGTAATTATTGTTTAAATTTCGATGTTTTCCTTCCAAATATGAAGGATGTGACTAGATGTTCGAATCTGCGAAACGTGATGGTTGTTTTAGGTTCAGTAATTAACTGTCTAAATTTCCAAATACGAAGTATGTTCTACGTACATAGAAATATGGAATTGCTGCATGCTGTGTTGTTCATATTTTACTCTTAATCATTTTAGGGCAATGTTACTTTAGCCCATATAATCTTTGCTAATAGTGTTCTCGTCTGTTATCGACAGTGGATGGAAAATTATCGTCGACGAGTGGGTGAAAGCCACCCAAGATCTTGCAGGTAGGGTATTGCTCAGTGTAGTCATTCTTTATTTAGTACATCGTGTATGATAGTGAAAGCATTCATATTTTAAATCTCTGATATCACACCTCTCGTTTTGCACACTAACTCATAACCTCCCCTTTTATTGTGTAGAAGGAGGTACCCCTGATTCTGTTAACCCTTCCACAGTTGATGAAGAAGAAGGGCTTCCTTCTCCTCCATTGGATGAAGGAGCATTTTTCTCCACTGGAACTATGGATTTTTCACAGGTATTTACTGCATGTGTCTGTCAATGCCATCGTAATACTATTTAGAATTGTTCTGAAGCTGTGTGATTGATACATGCCTTGATTATTGAGACTGACTTTCTTTTTATTCCTTCGGTGTCATTGGATGCAAACATGAAGTTTTTTGATGGCATGGACGATGATGGAAGTGAGTCAAACTTCCTCTCCTTTTGCCTAATCTTATATAGCTTTTGGTATTCGGTTCTTTTTCTGAATTCCCCACTTGTAAGAGTCGTGATGATGATGAACGGGGAAATCTTTTTTCAGATCCTCGAAACTGTGGGGAATTCAACAAGAACCTGGAAGTTCGTGAAGGTGTAAGAAAGCCCTCTTTGGCTAAGCAAGACCCTCCCAAACGGAGAGAAGAACCACCAAAACAGGTGACTCCTCTCATAAGGGATAACAGGGTGCAACAAGCTAAAAGGCAAGAGCCTCTTTCAAAGCCAAACAAGCCCTTAAACGTGCAATCTGGCCCTGGTAGACCTGTAAAGCCTAATAATGGTGAGCTGAAACTCATCAAAGATTCTAGGGTTCAGCAAAAACCCATGGTCCAAAGAAGGCCACCTCCTCAACCCGAGGTATTAAGTTCTCAAATTTTATACCATACTAAGCTATCAGTTTAAAAGATTTTGGAAGTTTAGAGCCTAATCTTGCTTCTATTTGTTGTTGAATCAGAAGATGAGATCTTCAAATGACAATGCAGTCCAAGAGAAGCTAGAAGCTACAAAAAGGAAACTTCAGGAGCGATACCAACAAGCTGAGAATGGTATTTTCATATTCATCTTAATTAAGATGTGATTCTCATTTAGTTCCCGGCTGTATATTTTTGCTAACTCCATTGTGAAAATTTCCAAATTTGATATACCTTTAACTGAAGTTAGCTTCCGAAGTTCAGTTCTGAGTTCTGACTGTCATTGTGATTTGTATCCCTGTTGATAAACAGCAAAGAGGCAGAGGACCATACAGGTAATGGAGATACAAGACATCCCTAAGCAGGGGCTTGCAAAACCAAATGCATTTGGTAAATTTGGCAACAACAACCGGCAATGGGCAAATGGCAGAAGATGATCTATTTGAGATTCTTCCTGTCTCTTTAACATCAGGCGAAATTCCCCTTTTATGGTGATTTACATGCCTTCGATTTGAGAGTTAGCTGTAAATTCTTTGGCAGAAGTTTGAGCTTCATGCTAATATTCGGTGGGATGAAGCCTCAGTGGTCATCCATTCGATACTAGGGGAATAAAGCTTCCGGGAACATTCTTTCTTGATCAGTTGATTTAGCAGTCATTTGATCACCTCAGTTTTAGAGTCCTGATCTAATTTACAACTGTTTCAATGACTGTTTGTCCCAGTTCCTTTGTTCCATAGCTGGATTATACATGAAGTTTATGCACAGAAAATGTGTGCATTTTCATAACCTTACTATGACATGTACTCCATATCACATAAATAAAGGTACACATGTTACTTCACATGATATAATATGTTGTGCAAAATTAAGGATTTTGTACAATTTGGGTGTAATAGGACTTGGTTCATCATGAATCGGGATTGAATGTCTCCTTTAGTTGGTGCTGTTGCATATTCAGATGATAGACAGAGTCGGAGTGTAATTATCGGTGTTTAGGAGTATTTGCCGGAAAATTAGGTGGTTTAACGTTCTTCATAATATGGATTTGAAAGAGTTTTAGAGTGTACTTTGGTTCTAGACAAAGATACAGTTTACAGATAATGGTAACAGAGGCTGAGATGCTTTAGATCTGTAACATTGTACTAGTAACATGTTTAGTCCAGTAATCATAGCAAGCAGCAGAGACATTAATTTTATACTCTTGGTACTCCGTATTATTTGATGCCTGTTTAAATTGCCATTGCACCTCTTGGCTCACAGTGACCTAAAACAAGTGTGTTACAATAATCAGTATTTCAGTAGTTGGTAAGATTTTAAATTTAATTAAAACAAAATGTTGGTTGTAAGATTGACTTTTCAATAATTATGAAATAAATATATTCAATTATTG

mRNA sequence

CTTTCCATGTTATTTCTGATATCTTCCCTTATCTTTCTCTCTAGATTTTCTCTCTTTCTTTATTTTCTCATAAATACAAATAATAATAAATAAATCCGATTTGCAATATTATTTTTAATTCCTTGTTTTTAATTATTTATTTCCAAATAAACAAATTTGGGAGAGAGAAAAAGAGAAGAAGAGGATCAAGTCAAAAGAGAGGGGCCAAAATCCATTTAATTCTCTCAATTCCCAATTTTAATTATTAAATATTTATTTATCCCCTCTCTTTTTCTTATTTTTCTATCTCTTCCTCTCACTTTCCTCTTCTTTTGTCTAATTATTATTCCTACCAAAACTAAAATTCCAGTCAAAAATTTCCCAGAAGAACAAATTACATACTTTGGGTTTCCCATTCTTCTCTGAAACTCCTAAAATTAGTCGAAAGTAGAACTCCAATTTAATAATTAATATTTTAATTTAGCTTATTAATAAGAATAATAAGGTCTTTGTAATTAATTACTACTTTTAATTAATCTTCTTCTGGATTGAGTTGGGTTGTTGCTTCATTGCTTGCATTTGTTGTTCAACTGCTCCGCCTTTTTTTTTTTTTTTTATAATTTTTTTTTATAATTTTAATTGCCATCTCTTCAAACTCACTTCAATCTTCATCTTCTTACAGAAGGAGAAGATACAGAGTTTTATTTTTGGGGTTTTATTATTTATTTTTATACGAGTATATTTTATTTTAATAAAATATTCTTGCGTAAAAGGTTAATCCCAAATCAGAAAAAAAAATCCATTGAGTTTCTATTCTATTCCGATTCCCTTTTTTTTTGGGGTTCTGATCGTATTCGCTTGATCGAATAATTTCTCCCCAAAAACATTTTCCCGAAATATTTTTTTCTGGAATTTTGATAATCTAGGCAATCGAATTTCGAGATTTTGACAACTGGGTATTGATTGAAACAAGTTTTGAGGATCTGGGTGATTGAAAATTCGATCAAAATGACCTCAAAACCAGGTGGTCATAACAGCAATGGTTGTAATAATAACGATGGAGGAGTTGGCCTTGAGAATTGGAGGGATTATTTCAGGAGAGCAAACTCTGATATATTCGATATAATCGAGCACGCAATAATGGTGGCTGCGTCAGATTGTCCCAAGGAGTTCCGAGTTAGGAGAGAGAAAATTGCTGAGTTACTCTTCACATGTAGATTGACTCGGTGTTTAGGGTGTGACCGCGTCGAGCTAGCTGTTTCTGAGGTTGATGATGGTGAAGGTGAGGTTAAGGTGGTGATTAAAGGGGTTAATGATCAGTTTAATGTTGTTGATGATGATGTTAATGGTGGTGGTGGGAGTAAAGGGAGTAAGGTAAATAGTACAACTAGGGAGAATAATTATGATCAGGGTGTTAATAGTGATCGTGATCATATTGGTGAGATGGAGATTGATATGATGTTGAATGAGTTGAATCATGAGAGTAATTTTACTTTTGATGATGCTGAGGCTTTGACGAATGAGATTGAAGAAGCTAAAGAGGTTGCTGAGGAGGTTTTGAGGATCAAAGAGATACTTCTTAACAGCCAAGATGAGTCTGATTCAGTGTTGTTCGAGTCATTAAGGAGGCTGCAATTGATGGCTTTGGATGTTGATCTGCTAAAGTCAACGGAGATTGGGAAGGCTGTTAACCGCATTAGAAGACATAGTTCAAAGGATATTCGCCATCTTGCTCGAGCGTTAATAGATGGATGGAAAATTATCGTCGACGAGTGGGTGAAAGCCACCCAAGATCTTGCAGAAGGAGGTACCCCTGATTCTGTTAACCCTTCCACAGTTGATGAAGAAGAAGGGCTTCCTTCTCCTCCATTGGATGAAGGAGCATTTTTCTCCACTGGAACTATGGATTTTTCACAGTTTTTTGATGGCATGGACGATGATGGAAATCCTCGAAACTGTGGGGAATTCAACAAGAACCTGGAAGTTCGTGAAGGTGTAAGAAAGCCCTCTTTGGCTAAGCAAGACCCTCCCAAACGGAGAGAAGAACCACCAAAACAGGTGACTCCTCTCATAAGGGATAACAGGGTGCAACAAGCTAAAAGGCAAGAGCCTCTTTCAAAGCCAAACAAGCCCTTAAACGTGCAATCTGGCCCTGGTAGACCTGTAAAGCCTAATAATGGTGAGCTGAAACTCATCAAAGATTCTAGGGTTCAGCAAAAACCCATGGTCCAAAGAAGGCCACCTCCTCAACCCGAGAAGATGAGATCTTCAAATGACAATGCAGTCCAAGAGAAGCTAGAAGCTACAAAAAGGAAACTTCAGGAGCGATACCAACAAGCTGAGAATGCAAAGAGGCAGAGGACCATACAGGTAATGGAGATACAAGACATCCCTAAGCAGGGGCTTGCAAAACCAAATGCATTTGGTAAATTTGGCAACAACAACCGGCAATGGGCAAATGGCAGAAGATGATCTATTTGAGATTCTTCCTGTCTCTTTAACATCAGGCGAAATTCCCCTTTTATGGTGATTTACATGCCTTCGATTTGAGAGTTAGCTGTAAATTCTTTGGCAGAAGTTTGAGCTTCATGCTAATATTCGGTGGGATGAAGCCTCAGTGGTCATCCATTCGATACTAGGGGAATAAAGCTTCCGGGAACATTCTTTCTTGATCAGTTGATTTAGCAGTCATTTGATCACCTCAGTTTTAGAGTCCTGATCTAATTTACAACTGTTTCAATGACTGTTTGTCCCAGTTCCTTTGTTCCATAGCTGGATTATACATGAAGTTTATGCACAGAAAATGTGTGCATTTTCATAACCTTACTATGACATGTACTCCATATCACATAAATAAAGGTACACATGTTACTTCACATGATATAATATGTTGTGCAAAATTAAGGATTTTGTACAATTTGGGTGTAATAGGACTTGGTTCATCATGAATCGGGATTGAATGTCTCCTTTAGTTGGTGCTGTTGCATATTCAGATGATAGACAGAGTCGGAGTGTAATTATCGGTGTTTAGGAGTATTTGCCGGAAAATTAGGTGGTTTAACGTTCTTCATAATATGGATTTGAAAGAGTTTTAGAGTGTACTTTGGTTCTAGACAAAGATACAGTTTACAGATAATGGTAACAGAGGCTGAGATGCTTTAGATCTGTAACATTGTACTAGTAACATGTTTAGTCCAGTAATCATAGCAAGCAGCAGAGACATTAATTTTATACTCTTGGTACTCCGTATTATTTGATGCCTGTTTAAATTGCCATTGCACCTCTTGGCTCACAGTGACCTAAAACAAGTGTGTTACAATAATCAGTATTTCAGTAGTTGGTAAGATTTTAAATTTAATTAAAACAAAATGTTGGTTGTAAGATTGACTTTTCAATAATTATGAAATAAATATATTCAATTATTG

Coding sequence (CDS)

ATGACCTCAAAACCAGGTGGTCATAACAGCAATGGTTGTAATAATAACGATGGAGGAGTTGGCCTTGAGAATTGGAGGGATTATTTCAGGAGAGCAAACTCTGATATATTCGATATAATCGAGCACGCAATAATGGTGGCTGCGTCAGATTGTCCCAAGGAGTTCCGAGTTAGGAGAGAGAAAATTGCTGAGTTACTCTTCACATGTAGATTGACTCGGTGTTTAGGGTGTGACCGCGTCGAGCTAGCTGTTTCTGAGGTTGATGATGGTGAAGGTGAGGTTAAGGTGGTGATTAAAGGGGTTAATGATCAGTTTAATGTTGTTGATGATGATGTTAATGGTGGTGGTGGGAGTAAAGGGAGTAAGGTAAATAGTACAACTAGGGAGAATAATTATGATCAGGGTGTTAATAGTGATCGTGATCATATTGGTGAGATGGAGATTGATATGATGTTGAATGAGTTGAATCATGAGAGTAATTTTACTTTTGATGATGCTGAGGCTTTGACGAATGAGATTGAAGAAGCTAAAGAGGTTGCTGAGGAGGTTTTGAGGATCAAAGAGATACTTCTTAACAGCCAAGATGAGTCTGATTCAGTGTTGTTCGAGTCATTAAGGAGGCTGCAATTGATGGCTTTGGATGTTGATCTGCTAAAGTCAACGGAGATTGGGAAGGCTGTTAACCGCATTAGAAGACATAGTTCAAAGGATATTCGCCATCTTGCTCGAGCGTTAATAGATGGATGGAAAATTATCGTCGACGAGTGGGTGAAAGCCACCCAAGATCTTGCAGAAGGAGGTACCCCTGATTCTGTTAACCCTTCCACAGTTGATGAAGAAGAAGGGCTTCCTTCTCCTCCATTGGATGAAGGAGCATTTTTCTCCACTGGAACTATGGATTTTTCACAGTTTTTTGATGGCATGGACGATGATGGAAATCCTCGAAACTGTGGGGAATTCAACAAGAACCTGGAAGTTCGTGAAGGTGTAAGAAAGCCCTCTTTGGCTAAGCAAGACCCTCCCAAACGGAGAGAAGAACCACCAAAACAGGTGACTCCTCTCATAAGGGATAACAGGGTGCAACAAGCTAAAAGGCAAGAGCCTCTTTCAAAGCCAAACAAGCCCTTAAACGTGCAATCTGGCCCTGGTAGACCTGTAAAGCCTAATAATGGTGAGCTGAAACTCATCAAAGATTCTAGGGTTCAGCAAAAACCCATGGTCCAAAGAAGGCCACCTCCTCAACCCGAGAAGATGAGATCTTCAAATGACAATGCAGTCCAAGAGAAGCTAGAAGCTACAAAAAGGAAACTTCAGGAGCGATACCAACAAGCTGAGAATGCAAAGAGGCAGAGGACCATACAGGTAATGGAGATACAAGACATCCCTAAGCAGGGGCTTGCAAAACCAAATGCATTTGGTAAATTTGGCAACAACAACCGGCAATGGGCAAATGGCAGAAGATGA

Protein sequence

MTSKPGGHNSNGCNNNDGGVGLENWRDYFRRANSDIFDIIEHAIMVAASDCPKEFRVRREKIAELLFTCRLTRCLGCDRVELAVSEVDDGEGEVKVVIKGVNDQFNVVDDDVNGGGGSKGSKVNSTTRENNYDQGVNSDRDHIGEMEIDMMLNELNHESNFTFDDAEALTNEIEEAKEVAEEVLRIKEILLNSQDESDSVLFESLRRLQLMALDVDLLKSTEIGKAVNRIRRHSSKDIRHLARALIDGWKIIVDEWVKATQDLAEGGTPDSVNPSTVDEEEGLPSPPLDEGAFFSTGTMDFSQFFDGMDDDGNPRNCGEFNKNLEVREGVRKPSLAKQDPPKRREEPPKQVTPLIRDNRVQQAKRQEPLSKPNKPLNVQSGPGRPVKPNNGELKLIKDSRVQQKPMVQRRPPPQPEKMRSSNDNAVQEKLEATKRKLQERYQQAENAKRQRTIQVMEIQDIPKQGLAKPNAFGKFGNNNRQWANGRR

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo01952	Spo01952	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo01952.1	Spo01952.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01952.1.utr5p.1	Spo01952.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01952.1.CDS.9	Spo01952.1.CDS.9	CDS
Spo01952.1.CDS.8	Spo01952.1.CDS.8	CDS
Spo01952.1.CDS.7	Spo01952.1.CDS.7	CDS
Spo01952.1.CDS.6	Spo01952.1.CDS.6	CDS
Spo01952.1.CDS.5	Spo01952.1.CDS.5	CDS
Spo01952.1.CDS.4	Spo01952.1.CDS.4	CDS
Spo01952.1.CDS.3	Spo01952.1.CDS.3	CDS
Spo01952.1.CDS.2	Spo01952.1.CDS.2	CDS
Spo01952.1.CDS.1	Spo01952.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01952.1.utr3p.1	Spo01952.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01952.1.exon.9	Spo01952.1.exon.9	exon
Spo01952.1.exon.8	Spo01952.1.exon.8	exon
Spo01952.1.exon.7	Spo01952.1.exon.7	exon
Spo01952.1.exon.6	Spo01952.1.exon.6	exon
Spo01952.1.exon.5	Spo01952.1.exon.5	exon
Spo01952.1.exon.4	Spo01952.1.exon.4	exon
Spo01952.1.exon.3	Spo01952.1.exon.3	exon
Spo01952.1.exon.2	Spo01952.1.exon.2	exon
Spo01952.1.exon.1	Spo01952.1.exon.1	exon

Homology

[Close]

BLAST of Spo01952.1 vs. NCBI nr
Match: gi|902120555|gb|KNA03984.1| (hypothetical protein SOVF_203930 isoform A [Spinacia oleracea])

HSP 1 Score: 943.0 bits (2436), Expect = 2.100e-271
Identity = 486/487 (99.79%), Postives = 486/487 (99.79%), Query Frame = 1


		  
Query: 1   MTSKPGGHNSNGCNNNDGGVGLENWRDYFRRANSDIFDIIEHAIMVAASDCPKEFRVRRE 60
           MTSKPGGHNSNGCNNNDGGVGLENWRDYFRRANSDIFDIIEHAIMVAASDCPKEFRVRRE
Sbjct: 1   MTSKPGGHNSNGCNNNDGGVGLENWRDYFRRANSDIFDIIEHAIMVAASDCPKEFRVRRE 60

Query: 61  KIAELLFTCRLTRCLGCDRVELAVSEVDDGEGEVKVVIKGVNDQFNVVDDDVNGGGGSKG 120
           KIAELLFTCRLTRCLGCDRVELAVSEVDDGEGEVKVVIKGVNDQFNVVDDDVNGGGGSKG
Sbjct: 61  KIAELLFTCRLTRCLGCDRVELAVSEVDDGEGEVKVVIKGVNDQFNVVDDDVNGGGGSKG 120

Query: 121 SKVNSTTRENNYDQGVNSDRDHIGEMEIDMMLNELNHESNFTFDDAEALTNEIEEAKEVA 180
           SKVNSTTRENNYDQGVNSDRDHIGEMEIDMMLNELNHESNFTFDDAEALTNEIEEAKEVA
Sbjct: 121 SKVNSTTRENNYDQGVNSDRDHIGEMEIDMMLNELNHESNFTFDDAEALTNEIEEAKEVA 180

Query: 181 EEVLRIKEILLNSQDESDSVLFESLRRLQLMALDVDLLKSTEIGKAVNRIRRHSSKDIRH 240
           EEVLRIKEILLNSQDESDSVLFESLRRLQLMALDVDLLKSTEIGKAVNRIRRHSSKDIRH
Sbjct: 181 EEVLRIKEILLNSQDESDSVLFESLRRLQLMALDVDLLKSTEIGKAVNRIRRHSSKDIRH 240

Query: 241 LARALIDGWKIIVDEWVKATQDLAEGGTPDSVNPSTVDEEEGLPSPPLDEGAFFSTGTMD 300
           LARALIDGWKIIVDEWVKATQDLAEGGTPDSVNPSTVDEEEGLPSPPLDEGAFFSTGTMD
Sbjct: 241 LARALIDGWKIIVDEWVKATQDLAEGGTPDSVNPSTVDEEEGLPSPPLDEGAFFSTGTMD 300

Query: 301 FSQFFDGMDDDGNPRNCGEFNKNLEVREGVRKPSLAKQDPPKRREEPPKQVTPLIRDNRV 360
           FSQFFDGMDDDGNPRNCGEFNKNLEVREGVRKPSLAKQDPPKRREEPPKQVTPLIRDNRV
Sbjct: 301 FSQFFDGMDDDGNPRNCGEFNKNLEVREGVRKPSLAKQDPPKRREEPPKQVTPLIRDNRV 360

Query: 361 QQAKRQEPLSKPNKPLNVQSGPGRPVKPNNGELKLIKDSRVQQKPMVQRRPPPQPEKMRS 420
           QQAKRQEPLSKPNKPLNVQSGPGRPVKPNNGELKLIKD RVQQKPMVQRRPPPQPEKMRS
Sbjct: 361 QQAKRQEPLSKPNKPLNVQSGPGRPVKPNNGELKLIKDYRVQQKPMVQRRPPPQPEKMRS 420

Query: 421 SNDNAVQEKLEATKRKLQERYQQAENAKRQRTIQVMEIQDIPKQGLAKPNAFGKFGNNNR 480
           SNDNAVQEKLEATKRKLQERYQQAENAKRQRTIQVMEIQDIPKQGLAKPNAFGKFGNNNR
Sbjct: 421 SNDNAVQEKLEATKRKLQERYQQAENAKRQRTIQVMEIQDIPKQGLAKPNAFGKFGNNNR 480

Query: 481 QWANGRR 488
           QWANGRR
Sbjct: 481 QWANGRR 487

[Close]

BLAST of Spo01952.1 vs. NCBI nr
Match: gi|902120556|gb|KNA03985.1| (hypothetical protein SOVF_203930 isoform B [Spinacia oleracea])

HSP 1 Score: 937.2 bits (2421), Expect = 1.200e-269
Identity = 485/487 (99.59%), Postives = 485/487 (99.59%), Query Frame = 1


		  
Query: 1   MTSKPGGHNSNGCNNNDGGVGLENWRDYFRRANSDIFDIIEHAIMVAASDCPKEFRVRRE 60
           MTSKPGGHNSNGCNNNDGGVGLENWRDYFRRANSDIFDIIEHAIMVAASDCPKEFRVRRE
Sbjct: 1   MTSKPGGHNSNGCNNNDGGVGLENWRDYFRRANSDIFDIIEHAIMVAASDCPKEFRVRRE 60

Query: 61  KIAELLFTCRLTRCLGCDRVELAVSEVDDGEGEVKVVIKGVNDQFNVVDDDVNGGGGSKG 120
           KIAELLFTCRLTRCLGCDRVELAVSEVDDGEGEVKVVIKGVNDQFNVVDDDVNGGGGSKG
Sbjct: 61  KIAELLFTCRLTRCLGCDRVELAVSEVDDGEGEVKVVIKGVNDQFNVVDDDVNGGGGSKG 120

Query: 121 SKVNSTTRENNYDQGVNSDRDHIGEMEIDMMLNELNHESNFTFDDAEALTNEIEEAKEVA 180
           SKVNSTTRENNYDQGVNSDRDHIGEMEIDMMLNELNHESNFTFDDAEALTNEIEEAKEVA
Sbjct: 121 SKVNSTTRENNYDQGVNSDRDHIGEMEIDMMLNELNHESNFTFDDAEALTNEIEEAKEVA 180

Query: 181 EEVLRIKEILLNSQDESDSVLFESLRRLQLMALDVDLLKSTEIGKAVNRIRRHSSKDIRH 240
           EEVLRIKEILLNSQDESDSVLFESLRRLQLMALDVDLLKSTEIGKAVNRIRRHSSKDIRH
Sbjct: 181 EEVLRIKEILLNSQDESDSVLFESLRRLQLMALDVDLLKSTEIGKAVNRIRRHSSKDIRH 240

Query: 241 LARALIDGWKIIVDEWVKATQDLAEGGTPDSVNPSTVDEEEGLPSPPLDEGAFFSTGTMD 300
           LARALIDGWKIIVDEWVKATQDLAEGGTPDSVNPSTVDEEEGLPSPPLDEGAFFSTGTMD
Sbjct: 241 LARALIDGWKIIVDEWVKATQDLAEGGTPDSVNPSTVDEEEGLPSPPLDEGAFFSTGTMD 300

Query: 301 FSQFFDGMDDDGNPRNCGEFNKNLEVREGVRKPSLAKQDPPKRREEPPKQVTPLIRDNRV 360
           FSQFFDGMDDDGNPRNCGEFNKNLEVREGVRKPSLAKQDPPKRREEPPKQVTPLIRDNRV
Sbjct: 301 FSQFFDGMDDDGNPRNCGEFNKNLEVREGVRKPSLAKQDPPKRREEPPKQVTPLIRDNRV 360

Query: 361 QQAKRQEPLSKPNKPLNVQSGPGRPVKPNNGELKLIKDSRVQQKPMVQRRPPPQPEKMRS 420
           QQAKRQEPLSKPNKPLNVQSGPGRPVKPNNGELKLIKD RVQQKPMVQRRPPPQPE MRS
Sbjct: 361 QQAKRQEPLSKPNKPLNVQSGPGRPVKPNNGELKLIKDYRVQQKPMVQRRPPPQPE-MRS 420

Query: 421 SNDNAVQEKLEATKRKLQERYQQAENAKRQRTIQVMEIQDIPKQGLAKPNAFGKFGNNNR 480
           SNDNAVQEKLEATKRKLQERYQQAENAKRQRTIQVMEIQDIPKQGLAKPNAFGKFGNNNR
Sbjct: 421 SNDNAVQEKLEATKRKLQERYQQAENAKRQRTIQVMEIQDIPKQGLAKPNAFGKFGNNNR 480

Query: 481 QWANGRR 488
           QWANGRR
Sbjct: 481 QWANGRR 486

[Close]

BLAST of Spo01952.1 vs. NCBI nr
Match: gi|731324608|ref|XP_010673062.1| (PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 724.5 bits (1869), Expect = 1.200e-205
Identity = 395/500 (79.00%), Postives = 438/500 (87.60%), Query Frame = 1


		  
Query: 1   MTSKPGGHNSNGCNNNDGGVGLENWRDYFRRANSDIFDIIEHAIMVAASDCPKEFRVRRE 60
           M SK GGHN+N  + N GGV LENWRDYFRRANSDIF+IIEHAIMVAASDCPKEF+VRRE
Sbjct: 1   MGSKSGGHNNNNSSVN-GGV-LENWRDYFRRANSDIFEIIEHAIMVAASDCPKEFKVRRE 60

Query: 61  KIAELLFTCRLTRCLGCDRVELAVSEV---DDGEGEVKVVIKGVNDQFNVVDDDVNG--- 120
           KIAELLFTCRLTRCLGC+RVELAVSEV   DDG     + IKGV DQFNV DD V+G   
Sbjct: 61  KIAELLFTCRLTRCLGCERVELAVSEVVDYDDGYEVKGMKIKGV-DQFNV-DDHVHGCHG 120

Query: 121 ------GGGSKGSKVNSTTRE-NNYDQGVNSDRDHIGEMEIDMMLNELNHESNFTFDDAE 180
                  GGSKGSKVNSTTR+ ++YD G       +G+ME+++ +   NHESNF++DDAE
Sbjct: 121 DGDGDVDGGSKGSKVNSTTRDGDDYDLG------DVGQMEMNVNMMMNNHESNFSYDDAE 180

Query: 181 ALTNEIEEAKEVAEEVLRIKEILLNSQDESDSVLFESLRRLQLMALDVDLLKSTEIGKAV 240
           ALT+EIEEA+EV EEVLRIK+I+LNSQDESDSVLFESLRRLQLMAL+VD+LK+TEIGKAV
Sbjct: 181 ALTDEIEEAREVVEEVLRIKDIILNSQDESDSVLFESLRRLQLMALNVDILKTTEIGKAV 240

Query: 241 NRIRRHSSKDIRHLARALIDGWKIIVDEWVKATQDLAEGGTPDSVNPSTVDEEEGLPSPP 300
           NRIRRH+SK+IRHLARALIDGWKIIVDEWVKATQ+LAEGGTPDSVNPSTVDEEEGLPSPP
Sbjct: 241 NRIRRHNSKEIRHLARALIDGWKIIVDEWVKATQELAEGGTPDSVNPSTVDEEEGLPSPP 300

Query: 301 LDEGAFFSTGTMDFSQFFDGMDDDGNPRNCGEFNKNLEVREGVRKPSLAKQDPPKRREEP 360
           +DEG FFST TMDF+QFFDGMDDDGNPRNCGEF+KNLEVRE VRKPS+ KQ PP RR EP
Sbjct: 301 MDEGVFFSTQTMDFTQFFDGMDDDGNPRNCGEFDKNLEVREAVRKPSVTKQGPPNRRVEP 360

Query: 361 PKQVTPLIRDNRVQQAKRQEPLSKPNKPLNVQSGPGRPVKPNNGELKLIKDSRVQQKPMV 420
           PKQ+TP I+DN+VQQ +R EP  KPNKP  +QSGPGRPVKP NGEL+  KDS++QQKPMV
Sbjct: 361 PKQMTPPIKDNKVQQVRRVEPHPKPNKPAIIQSGPGRPVKP-NGELRTGKDSKLQQKPMV 420

Query: 421 QRRPPPQPEKMRSSNDNAVQEKLEATKRKLQERYQQAENAKRQRTIQVMEIQDIPKQGLA 480
            RRPPPQPEKMRSS+DNAVQEKLEATKRKLQERYQQAENAKRQRTIQVMEI D+PKQGL+
Sbjct: 421 HRRPPPQPEKMRSSSDNAVQEKLEATKRKLQERYQQAENAKRQRTIQVMEIHDLPKQGLS 480

Query: 481 KPNAFGKFGNNNRQWANGRR 488
           KPNAFGKFGNNNRQWANGRR
Sbjct: 481 KPNAFGKFGNNNRQWANGRR 489

[Close]

BLAST of Spo01952.1 vs. NCBI nr
Match: gi|224139692|ref|XP_002323230.1| (hypothetical protein POPTR_0016s03310g [Populus trichocarpa])

HSP 1 Score: 458.8 bits (1179), Expect = 1.200e-125
Identity = 274/491 (55.80%), Postives = 340/491 (69.25%), Query Frame = 1


		  
Query: 20  VGLENWRDYFRRANSDIFDIIEHAIMVAASDCPKEFRVRREKIAELLFTCRLTRCLGCDR 79
           V L+ WRDYFR A+SDIF II+HAI+VAASDCPKEF++RR++IAE LF+CRL +C GC++
Sbjct: 4   VSLDYWRDYFRTASSDIFGIIDHAILVAASDCPKEFKLRRDRIAERLFSCRLIKCSGCNQ 63

Query: 80  VELAVSEVDDGEGEVKVVIK--------GVNDQFNVVDDDVNGGG------GSKGSKVNS 139
           VELAV   D+ E + +            G +D    VD D++ GG      GSK SKVNS
Sbjct: 64  VELAVPGHDEDERDDRGCCSKRRDGDNSGSDDDEEEVDIDIDDGGFEYEGGGSKESKVNS 123

Query: 140 TTRENNYDQGVNSDRDHIGEMEIDMMLNELNHESNFTFDDAEALTNEIEEAKEVAEEVLR 199
           + R+N++D G  +  D +               SNF+F +AEALT+EIEE  +  +EVLR
Sbjct: 124 SNRDNDFDNGEVNVNDQL--------------VSNFSFGEAEALTDEIEEVSQTVDEVLR 183

Query: 200 IKEILLNSQDESDSVLFESLRRLQLMALDVDLLKSTEIGKAVNRIRRHSSKDIRHLARAL 259
           IK+IL NSQDESDSVL ESLR+L+LMAL VD LK+TEIGKAVN +R+H SK IRHLAR L
Sbjct: 184 IKDILYNSQDESDSVLLESLRKLRLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTL 243

Query: 260 IDGWKIIVDEWVKATQDL-AEGGTPDSVNPSTVDEEEGLPSPPLDEGAFFST--GTMDFS 319
           I+ WK++VDEW  A   +    GTPDSVNPS VDEEEGLPSPPLDEGAFF+T   +M+ S
Sbjct: 244 IEDWKVLVDEWYSAANVIRGNEGTPDSVNPSVVDEEEGLPSPPLDEGAFFATQPTSMELS 303

Query: 320 QFFDGMDDDGNPRNCGEFNKNLEVREGVRKPSLAKQDPPKRREEPPKQVTPLIRDNRVQQ 379
           QFFDGMDDDGNPRN GEF KN   R   R+PS   Q+  K++++ PK      +DN  QQ
Sbjct: 304 QFFDGMDDDGNPRNNGEFIKNHVSR---RRPSAENQNISKQKQQTPKGANMPSKDNESQQ 363

Query: 380 AKRQEPLSKPNKPLNVQSGPGRPVKPN-----NGELKLIKDSRVQQKPMVQRRPPP-QPE 439
            ++QE + K +KP N  SGPGRP+K N     N E  LI   R   K   QR+PP  Q +
Sbjct: 364 MRKQEDVVKASKPSNANSGPGRPLKQNVEQKMNQETVLI---RKTDKVTSQRKPPTGQQD 423

Query: 440 KMRSSNDNAVQEKLEATKRKLQERYQQAENAKRQRTIQVMEIQDIPKQGLAKPNAFGKFG 488
           K++SS++ AVQ KLEATKRKLQERYQQAE AKRQRTIQVME+ D+PKQG  + N   + G
Sbjct: 424 KLKSSDEVAVQMKLEATKRKLQERYQQAEKAKRQRTIQVMELHDLPKQGHVQKNQPMRLG 474

[Close]

BLAST of Spo01952.1 vs. NCBI nr
Match: gi|255552481|ref|XP_002517284.1| (PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Ricinus communis])

HSP 1 Score: 458.4 bits (1178), Expect = 1.600e-125
Identity = 276/484 (57.02%), Postives = 347/484 (71.69%), Query Frame = 1


		  
Query: 20  VGLENWRDYFRRANSDIFDIIEHAIMVAASDCPKEFRVRREKIAELLFTCRLTRCLGCDR 79
           V L+ WR+YFR ANSDIF II+HAIMVAASDCPKEFR+RR++IAE LF+CRLTRC GC+ 
Sbjct: 4   VSLDYWRNYFRTANSDIFAIIDHAIMVAASDCPKEFRLRRDRIAERLFSCRLTRCSGCNH 63

Query: 80  VELAVSEVDDGEGEVKVVIKGVNDQFNVVDDD---------VNGGGGSKGSKVNSTTREN 139
           V+LAV    +GE +     K  +D     DDD            GG SK SKVNS+   N
Sbjct: 64  VDLAVP-AHEGENDDGGACKRRDDHHVEDDDDDDVDIDVCEFEAGGTSKESKVNSS---N 123

Query: 140 NYDQGVNSDRDHIGEMEIDMMLNELNHESNFTFDDAEALTNEIEEAKEVAEEVLRIKEIL 199
           N D   ++D D IGE+ ++  L      SNF++ +AEALT+EIEE   V  EVLRIK+IL
Sbjct: 124 NRD---DNDID-IGEVNVNDQLL-----SNFSYGEAEALTDEIEEESMVVGEVLRIKDIL 183

Query: 200 LNSQDESDSVLFESLRRLQLMALDVDLLKSTEIGKAVNRIRRHSSKDIRHLARALIDGWK 259
           L+S+DES+SVLFESLRRLQLMAL VD LK+TEIGKAVN +R+H S+ IRHLAR LIDGWK
Sbjct: 184 LHSRDESESVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSQQIRHLARVLIDGWK 243

Query: 260 IIVDEWVKATQDL-AEGGTPDSVNPSTVDEEEGLPSPPLDEGAFFSTGT--MDFSQFFDG 319
           ++VDEW   T+ +  + GTP+SVNPS VDEE+GLPSPPLDE  FF+     ++ +QFFDG
Sbjct: 244 VLVDEWYSTTKAIRGDEGTPESVNPSVVDEEDGLPSPPLDEAFFFAAQNTGIELAQFFDG 303

Query: 320 MDDDGNPRNCGEFNKNLEVREGVRKPSLAKQDPPKRREEPPKQVTPLIRDNRVQQAKRQE 379
           MDDDGNPRN GEF KN   RE  RK SL +++ PKR+E  P +   + +DN+  Q++RQE
Sbjct: 304 MDDDGNPRNSGEFIKN---RENGRKSSLEQKNIPKRKEHTPSEANVVAKDNKSHQSRRQE 363

Query: 380 PLSKPNKPLNVQSGPGRPVKPNNGELKLIKDSRVQQKP---MVQRR-PPPQPEKMRSSND 439
            + KPNKP    SGPGRP K  + E K   +S++Q+K    + QR+ P  Q +K + S+D
Sbjct: 364 AMRKPNKPSTTVSGPGRPTK-QSVEQKANNESKIQRKTDKLVTQRKLPGGQQDKFKCSDD 423

Query: 440 NAVQEKLEATKRKLQERYQQAENAKRQRTIQVMEIQDIPKQGLAKPNAFGKFGNNNRQWA 488
           +AVQ+KLEATKRKLQERYQQAENAKRQRTIQVME+ D+PKQ L + N   + G++NR WA
Sbjct: 424 DAVQKKLEATKRKLQERYQQAENAKRQRTIQVMELHDLPKQALVQKNPNMRPGSHNRHWA 470

[Close]

BLAST of Spo01952.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q9Q3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_203930 PE=4 SV=1)

HSP 1 Score: 943.0 bits (2436), Expect = 1.500e-271
Identity = 486/487 (99.79%), Postives = 486/487 (99.79%), Query Frame = 1


		  
Query: 1   MTSKPGGHNSNGCNNNDGGVGLENWRDYFRRANSDIFDIIEHAIMVAASDCPKEFRVRRE 60
           MTSKPGGHNSNGCNNNDGGVGLENWRDYFRRANSDIFDIIEHAIMVAASDCPKEFRVRRE
Sbjct: 1   MTSKPGGHNSNGCNNNDGGVGLENWRDYFRRANSDIFDIIEHAIMVAASDCPKEFRVRRE 60

Query: 61  KIAELLFTCRLTRCLGCDRVELAVSEVDDGEGEVKVVIKGVNDQFNVVDDDVNGGGGSKG 120
           KIAELLFTCRLTRCLGCDRVELAVSEVDDGEGEVKVVIKGVNDQFNVVDDDVNGGGGSKG
Sbjct: 61  KIAELLFTCRLTRCLGCDRVELAVSEVDDGEGEVKVVIKGVNDQFNVVDDDVNGGGGSKG 120

Query: 121 SKVNSTTRENNYDQGVNSDRDHIGEMEIDMMLNELNHESNFTFDDAEALTNEIEEAKEVA 180
           SKVNSTTRENNYDQGVNSDRDHIGEMEIDMMLNELNHESNFTFDDAEALTNEIEEAKEVA
Sbjct: 121 SKVNSTTRENNYDQGVNSDRDHIGEMEIDMMLNELNHESNFTFDDAEALTNEIEEAKEVA 180

Query: 181 EEVLRIKEILLNSQDESDSVLFESLRRLQLMALDVDLLKSTEIGKAVNRIRRHSSKDIRH 240
           EEVLRIKEILLNSQDESDSVLFESLRRLQLMALDVDLLKSTEIGKAVNRIRRHSSKDIRH
Sbjct: 181 EEVLRIKEILLNSQDESDSVLFESLRRLQLMALDVDLLKSTEIGKAVNRIRRHSSKDIRH 240

Query: 241 LARALIDGWKIIVDEWVKATQDLAEGGTPDSVNPSTVDEEEGLPSPPLDEGAFFSTGTMD 300
           LARALIDGWKIIVDEWVKATQDLAEGGTPDSVNPSTVDEEEGLPSPPLDEGAFFSTGTMD
Sbjct: 241 LARALIDGWKIIVDEWVKATQDLAEGGTPDSVNPSTVDEEEGLPSPPLDEGAFFSTGTMD 300

Query: 301 FSQFFDGMDDDGNPRNCGEFNKNLEVREGVRKPSLAKQDPPKRREEPPKQVTPLIRDNRV 360
           FSQFFDGMDDDGNPRNCGEFNKNLEVREGVRKPSLAKQDPPKRREEPPKQVTPLIRDNRV
Sbjct: 301 FSQFFDGMDDDGNPRNCGEFNKNLEVREGVRKPSLAKQDPPKRREEPPKQVTPLIRDNRV 360

Query: 361 QQAKRQEPLSKPNKPLNVQSGPGRPVKPNNGELKLIKDSRVQQKPMVQRRPPPQPEKMRS 420
           QQAKRQEPLSKPNKPLNVQSGPGRPVKPNNGELKLIKD RVQQKPMVQRRPPPQPEKMRS
Sbjct: 361 QQAKRQEPLSKPNKPLNVQSGPGRPVKPNNGELKLIKDYRVQQKPMVQRRPPPQPEKMRS 420

Query: 421 SNDNAVQEKLEATKRKLQERYQQAENAKRQRTIQVMEIQDIPKQGLAKPNAFGKFGNNNR 480
           SNDNAVQEKLEATKRKLQERYQQAENAKRQRTIQVMEIQDIPKQGLAKPNAFGKFGNNNR
Sbjct: 421 SNDNAVQEKLEATKRKLQERYQQAENAKRQRTIQVMEIQDIPKQGLAKPNAFGKFGNNNR 480

Query: 481 QWANGRR 488
           QWANGRR
Sbjct: 481 QWANGRR 487

[Close]

BLAST of Spo01952.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q9N3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_203930 PE=4 SV=1)

HSP 1 Score: 937.2 bits (2421), Expect = 8.100e-270
Identity = 485/487 (99.59%), Postives = 485/487 (99.59%), Query Frame = 1


		  
Query: 1   MTSKPGGHNSNGCNNNDGGVGLENWRDYFRRANSDIFDIIEHAIMVAASDCPKEFRVRRE 60
           MTSKPGGHNSNGCNNNDGGVGLENWRDYFRRANSDIFDIIEHAIMVAASDCPKEFRVRRE
Sbjct: 1   MTSKPGGHNSNGCNNNDGGVGLENWRDYFRRANSDIFDIIEHAIMVAASDCPKEFRVRRE 60

Query: 61  KIAELLFTCRLTRCLGCDRVELAVSEVDDGEGEVKVVIKGVNDQFNVVDDDVNGGGGSKG 120
           KIAELLFTCRLTRCLGCDRVELAVSEVDDGEGEVKVVIKGVNDQFNVVDDDVNGGGGSKG
Sbjct: 61  KIAELLFTCRLTRCLGCDRVELAVSEVDDGEGEVKVVIKGVNDQFNVVDDDVNGGGGSKG 120

Query: 121 SKVNSTTRENNYDQGVNSDRDHIGEMEIDMMLNELNHESNFTFDDAEALTNEIEEAKEVA 180
           SKVNSTTRENNYDQGVNSDRDHIGEMEIDMMLNELNHESNFTFDDAEALTNEIEEAKEVA
Sbjct: 121 SKVNSTTRENNYDQGVNSDRDHIGEMEIDMMLNELNHESNFTFDDAEALTNEIEEAKEVA 180

Query: 181 EEVLRIKEILLNSQDESDSVLFESLRRLQLMALDVDLLKSTEIGKAVNRIRRHSSKDIRH 240
           EEVLRIKEILLNSQDESDSVLFESLRRLQLMALDVDLLKSTEIGKAVNRIRRHSSKDIRH
Sbjct: 181 EEVLRIKEILLNSQDESDSVLFESLRRLQLMALDVDLLKSTEIGKAVNRIRRHSSKDIRH 240

Query: 241 LARALIDGWKIIVDEWVKATQDLAEGGTPDSVNPSTVDEEEGLPSPPLDEGAFFSTGTMD 300
           LARALIDGWKIIVDEWVKATQDLAEGGTPDSVNPSTVDEEEGLPSPPLDEGAFFSTGTMD
Sbjct: 241 LARALIDGWKIIVDEWVKATQDLAEGGTPDSVNPSTVDEEEGLPSPPLDEGAFFSTGTMD 300

Query: 301 FSQFFDGMDDDGNPRNCGEFNKNLEVREGVRKPSLAKQDPPKRREEPPKQVTPLIRDNRV 360
           FSQFFDGMDDDGNPRNCGEFNKNLEVREGVRKPSLAKQDPPKRREEPPKQVTPLIRDNRV
Sbjct: 301 FSQFFDGMDDDGNPRNCGEFNKNLEVREGVRKPSLAKQDPPKRREEPPKQVTPLIRDNRV 360

Query: 361 QQAKRQEPLSKPNKPLNVQSGPGRPVKPNNGELKLIKDSRVQQKPMVQRRPPPQPEKMRS 420
           QQAKRQEPLSKPNKPLNVQSGPGRPVKPNNGELKLIKD RVQQKPMVQRRPPPQPE MRS
Sbjct: 361 QQAKRQEPLSKPNKPLNVQSGPGRPVKPNNGELKLIKDYRVQQKPMVQRRPPPQPE-MRS 420

Query: 421 SNDNAVQEKLEATKRKLQERYQQAENAKRQRTIQVMEIQDIPKQGLAKPNAFGKFGNNNR 480
           SNDNAVQEKLEATKRKLQERYQQAENAKRQRTIQVMEIQDIPKQGLAKPNAFGKFGNNNR
Sbjct: 421 SNDNAVQEKLEATKRKLQERYQQAENAKRQRTIQVMEIQDIPKQGLAKPNAFGKFGNNNR 480

Query: 481 QWANGRR 488
           QWANGRR
Sbjct: 481 QWANGRR 486

[Close]

BLAST of Spo01952.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FH35_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g063270 PE=4 SV=1)

HSP 1 Score: 724.5 bits (1869), Expect = 8.300e-206
Identity = 395/500 (79.00%), Postives = 438/500 (87.60%), Query Frame = 1


		  
Query: 1   MTSKPGGHNSNGCNNNDGGVGLENWRDYFRRANSDIFDIIEHAIMVAASDCPKEFRVRRE 60
           M SK GGHN+N  + N GGV LENWRDYFRRANSDIF+IIEHAIMVAASDCPKEF+VRRE
Sbjct: 1   MGSKSGGHNNNNSSVN-GGV-LENWRDYFRRANSDIFEIIEHAIMVAASDCPKEFKVRRE 60

Query: 61  KIAELLFTCRLTRCLGCDRVELAVSEV---DDGEGEVKVVIKGVNDQFNVVDDDVNG--- 120
           KIAELLFTCRLTRCLGC+RVELAVSEV   DDG     + IKGV DQFNV DD V+G   
Sbjct: 61  KIAELLFTCRLTRCLGCERVELAVSEVVDYDDGYEVKGMKIKGV-DQFNV-DDHVHGCHG 120

Query: 121 ------GGGSKGSKVNSTTRE-NNYDQGVNSDRDHIGEMEIDMMLNELNHESNFTFDDAE 180
                  GGSKGSKVNSTTR+ ++YD G       +G+ME+++ +   NHESNF++DDAE
Sbjct: 121 DGDGDVDGGSKGSKVNSTTRDGDDYDLG------DVGQMEMNVNMMMNNHESNFSYDDAE 180

Query: 181 ALTNEIEEAKEVAEEVLRIKEILLNSQDESDSVLFESLRRLQLMALDVDLLKSTEIGKAV 240
           ALT+EIEEA+EV EEVLRIK+I+LNSQDESDSVLFESLRRLQLMAL+VD+LK+TEIGKAV
Sbjct: 181 ALTDEIEEAREVVEEVLRIKDIILNSQDESDSVLFESLRRLQLMALNVDILKTTEIGKAV 240

Query: 241 NRIRRHSSKDIRHLARALIDGWKIIVDEWVKATQDLAEGGTPDSVNPSTVDEEEGLPSPP 300
           NRIRRH+SK+IRHLARALIDGWKIIVDEWVKATQ+LAEGGTPDSVNPSTVDEEEGLPSPP
Sbjct: 241 NRIRRHNSKEIRHLARALIDGWKIIVDEWVKATQELAEGGTPDSVNPSTVDEEEGLPSPP 300

Query: 301 LDEGAFFSTGTMDFSQFFDGMDDDGNPRNCGEFNKNLEVREGVRKPSLAKQDPPKRREEP 360
           +DEG FFST TMDF+QFFDGMDDDGNPRNCGEF+KNLEVRE VRKPS+ KQ PP RR EP
Sbjct: 301 MDEGVFFSTQTMDFTQFFDGMDDDGNPRNCGEFDKNLEVREAVRKPSVTKQGPPNRRVEP 360

Query: 361 PKQVTPLIRDNRVQQAKRQEPLSKPNKPLNVQSGPGRPVKPNNGELKLIKDSRVQQKPMV 420
           PKQ+TP I+DN+VQQ +R EP  KPNKP  +QSGPGRPVKP NGEL+  KDS++QQKPMV
Sbjct: 361 PKQMTPPIKDNKVQQVRRVEPHPKPNKPAIIQSGPGRPVKP-NGELRTGKDSKLQQKPMV 420

Query: 421 QRRPPPQPEKMRSSNDNAVQEKLEATKRKLQERYQQAENAKRQRTIQVMEIQDIPKQGLA 480
            RRPPPQPEKMRSS+DNAVQEKLEATKRKLQERYQQAENAKRQRTIQVMEI D+PKQGL+
Sbjct: 421 HRRPPPQPEKMRSSSDNAVQEKLEATKRKLQERYQQAENAKRQRTIQVMEIHDLPKQGLS 480

Query: 481 KPNAFGKFGNNNRQWANGRR 488
           KPNAFGKFGNNNRQWANGRR
Sbjct: 481 KPNAFGKFGNNNRQWANGRR 489

[Close]

BLAST of Spo01952.1 vs. UniProtKB/TrEMBL
Match: B9IHN3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s03310g PE=4 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 8.500e-126
Identity = 274/491 (55.80%), Postives = 340/491 (69.25%), Query Frame = 1


		  
Query: 20  VGLENWRDYFRRANSDIFDIIEHAIMVAASDCPKEFRVRREKIAELLFTCRLTRCLGCDR 79
           V L+ WRDYFR A+SDIF II+HAI+VAASDCPKEF++RR++IAE LF+CRL +C GC++
Sbjct: 4   VSLDYWRDYFRTASSDIFGIIDHAILVAASDCPKEFKLRRDRIAERLFSCRLIKCSGCNQ 63

Query: 80  VELAVSEVDDGEGEVKVVIK--------GVNDQFNVVDDDVNGGG------GSKGSKVNS 139
           VELAV   D+ E + +            G +D    VD D++ GG      GSK SKVNS
Sbjct: 64  VELAVPGHDEDERDDRGCCSKRRDGDNSGSDDDEEEVDIDIDDGGFEYEGGGSKESKVNS 123

Query: 140 TTRENNYDQGVNSDRDHIGEMEIDMMLNELNHESNFTFDDAEALTNEIEEAKEVAEEVLR 199
           + R+N++D G  +  D +               SNF+F +AEALT+EIEE  +  +EVLR
Sbjct: 124 SNRDNDFDNGEVNVNDQL--------------VSNFSFGEAEALTDEIEEVSQTVDEVLR 183

Query: 200 IKEILLNSQDESDSVLFESLRRLQLMALDVDLLKSTEIGKAVNRIRRHSSKDIRHLARAL 259
           IK+IL NSQDESDSVL ESLR+L+LMAL VD LK+TEIGKAVN +R+H SK IRHLAR L
Sbjct: 184 IKDILYNSQDESDSVLLESLRKLRLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTL 243

Query: 260 IDGWKIIVDEWVKATQDL-AEGGTPDSVNPSTVDEEEGLPSPPLDEGAFFST--GTMDFS 319
           I+ WK++VDEW  A   +    GTPDSVNPS VDEEEGLPSPPLDEGAFF+T   +M+ S
Sbjct: 244 IEDWKVLVDEWYSAANVIRGNEGTPDSVNPSVVDEEEGLPSPPLDEGAFFATQPTSMELS 303

Query: 320 QFFDGMDDDGNPRNCGEFNKNLEVREGVRKPSLAKQDPPKRREEPPKQVTPLIRDNRVQQ 379
           QFFDGMDDDGNPRN GEF KN   R   R+PS   Q+  K++++ PK      +DN  QQ
Sbjct: 304 QFFDGMDDDGNPRNNGEFIKNHVSR---RRPSAENQNISKQKQQTPKGANMPSKDNESQQ 363

Query: 380 AKRQEPLSKPNKPLNVQSGPGRPVKPN-----NGELKLIKDSRVQQKPMVQRRPPP-QPE 439
            ++QE + K +KP N  SGPGRP+K N     N E  LI   R   K   QR+PP  Q +
Sbjct: 364 MRKQEDVVKASKPSNANSGPGRPLKQNVEQKMNQETVLI---RKTDKVTSQRKPPTGQQD 423

Query: 440 KMRSSNDNAVQEKLEATKRKLQERYQQAENAKRQRTIQVMEIQDIPKQGLAKPNAFGKFG 488
           K++SS++ AVQ KLEATKRKLQERYQQAE AKRQRTIQVME+ D+PKQG  + N   + G
Sbjct: 424 KLKSSDEVAVQMKLEATKRKLQERYQQAEKAKRQRTIQVMELHDLPKQGHVQKNQPMRLG 474

[Close]

BLAST of Spo01952.1 vs. UniProtKB/TrEMBL
Match: B9RU65_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1632970 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 1.100e-125
Identity = 276/484 (57.02%), Postives = 347/484 (71.69%), Query Frame = 1


		  
Query: 20  VGLENWRDYFRRANSDIFDIIEHAIMVAASDCPKEFRVRREKIAELLFTCRLTRCLGCDR 79
           V L+ WR+YFR ANSDIF II+HAIMVAASDCPKEFR+RR++IAE LF+CRLTRC GC+ 
Sbjct: 4   VSLDYWRNYFRTANSDIFAIIDHAIMVAASDCPKEFRLRRDRIAERLFSCRLTRCSGCNH 63

Query: 80  VELAVSEVDDGEGEVKVVIKGVNDQFNVVDDD---------VNGGGGSKGSKVNSTTREN 139
           V+LAV    +GE +     K  +D     DDD            GG SK SKVNS+   N
Sbjct: 64  VDLAVP-AHEGENDDGGACKRRDDHHVEDDDDDDVDIDVCEFEAGGTSKESKVNSS---N 123

Query: 140 NYDQGVNSDRDHIGEMEIDMMLNELNHESNFTFDDAEALTNEIEEAKEVAEEVLRIKEIL 199
           N D   ++D D IGE+ ++  L      SNF++ +AEALT+EIEE   V  EVLRIK+IL
Sbjct: 124 NRD---DNDID-IGEVNVNDQLL-----SNFSYGEAEALTDEIEEESMVVGEVLRIKDIL 183

Query: 200 LNSQDESDSVLFESLRRLQLMALDVDLLKSTEIGKAVNRIRRHSSKDIRHLARALIDGWK 259
           L+S+DES+SVLFESLRRLQLMAL VD LK+TEIGKAVN +R+H S+ IRHLAR LIDGWK
Sbjct: 184 LHSRDESESVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSQQIRHLARVLIDGWK 243

Query: 260 IIVDEWVKATQDL-AEGGTPDSVNPSTVDEEEGLPSPPLDEGAFFSTGT--MDFSQFFDG 319
           ++VDEW   T+ +  + GTP+SVNPS VDEE+GLPSPPLDE  FF+     ++ +QFFDG
Sbjct: 244 VLVDEWYSTTKAIRGDEGTPESVNPSVVDEEDGLPSPPLDEAFFFAAQNTGIELAQFFDG 303

Query: 320 MDDDGNPRNCGEFNKNLEVREGVRKPSLAKQDPPKRREEPPKQVTPLIRDNRVQQAKRQE 379
           MDDDGNPRN GEF KN   RE  RK SL +++ PKR+E  P +   + +DN+  Q++RQE
Sbjct: 304 MDDDGNPRNSGEFIKN---RENGRKSSLEQKNIPKRKEHTPSEANVVAKDNKSHQSRRQE 363

Query: 380 PLSKPNKPLNVQSGPGRPVKPNNGELKLIKDSRVQQKP---MVQRR-PPPQPEKMRSSND 439
            + KPNKP    SGPGRP K  + E K   +S++Q+K    + QR+ P  Q +K + S+D
Sbjct: 364 AMRKPNKPSTTVSGPGRPTK-QSVEQKANNESKIQRKTDKLVTQRKLPGGQQDKFKCSDD 423

Query: 440 NAVQEKLEATKRKLQERYQQAENAKRQRTIQVMEIQDIPKQGLAKPNAFGKFGNNNRQWA 488
           +AVQ+KLEATKRKLQERYQQAENAKRQRTIQVME+ D+PKQ L + N   + G++NR WA
Sbjct: 424 DAVQKKLEATKRKLQERYQQAENAKRQRTIQVMELHDLPKQALVQKNPNMRPGSHNRHWA 470

[Close]

BLAST of Spo01952.1 vs. ExPASy Swiss-Prot
Match: MD26B_ARATH (Probable mediator of RNA polymerase II transcription subunit 26b OS=Arabidopsis thaliana GN=MED26B PE=2 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 3.600e-85
Identity = 219/481 (45.53%), Postives = 288/481 (59.88%), Query Frame = 1


		  
Query: 22  LENWRDYFRR-ANSDIFDIIEHAIMVAASDCPKEFRVRREKIAELLFTCRLTRCLGCDRV 81
           L++WR+YFRR  +SDIF II+HAIMVAA+DCP +F+ RR+KIAELLF+CR+ RC+GCD +
Sbjct: 7   LDSWREYFRRRGDSDIFGIIDHAIMVAATDCPNKFKSRRDKIAELLFSCRVNRCVGCDHL 66

Query: 82  ELAVSEVDDGEGEVKVVIKGVNDQFNVVDDDVNGGGGSKGSKVNSTTRENNYDQGVNSDR 141
           EL+V     G+ E      G       VD+D    GGSK SK NS+  +NN         
Sbjct: 67  ELSVP----GDDEANRGTTGNGGGGTAVDEDYEVAGGSKESKANSSRGDNN--------- 126

Query: 142 DHIGEMEIDMMLNELNHESNFTFDDAEALTNEIEEAKEVAEEVLRIKEILLNSQDESDSV 201
                             SN+TFD+AEAL++EIEE   V++EV RIKEILLN +DE +SV
Sbjct: 127 ---------------QIVSNYTFDEAEALSDEIEEFSVVSKEVARIKEILLNKEDEPNSV 186

Query: 202 LFESLRRLQLMALDVDLLKSTEIGKAVNRIRRHSSKDIRHLARALIDGWKIIVDEWVKAT 261
           L +SLR L+LM+L+VD+LKSTEIGKAVN +R+HSS  IR LA+ LI  WK +VD+WV  T
Sbjct: 187 LLDSLRHLKLMSLNVDILKSTEIGKAVNGLRKHSSDKIRQLAKTLIAEWKELVDQWVNTT 246

Query: 262 QDLAEG-GTPDSVNPSTVDEEEGLPSPPLDEGAFF-STGTMDFSQFFDGMDDDGNPRNCG 321
           +++    GTP+S NPS +DEEE  PS P D   F       + S FFD +D DGNPRN  
Sbjct: 247 KEITGAEGTPESANPSVLDEEEAFPSLPYDVDIFTPEPNGFEISHFFDSLDFDGNPRNSE 306

Query: 322 EFNKNLEVREGVRKPSLAKQDPPKRREEPPKQVTPLIRDNRVQQAKRQEPLSKPNKPLNV 381
           E N +   RE  R+P    Q+  KR+ E  +         R+Q A  +    KP+   + 
Sbjct: 307 EHNTS---REHERRP----QNIAKRKPEGTQM--------RIQDAPFRS--IKPSSATDF 366

Query: 382 QSGPGRPVKPNNGELKLIKDSRV--QQKPMVQRR----------PPPQPEKMRSSNDNAV 441
             G  RPVK +  +    +   V   +KPM+QR+          P PQ EK++  + +A 
Sbjct: 367 -DGTRRPVKQSTEQRMKNETVSVHKSEKPMIQRKPVVTEQKRKAPGPQQEKLKGLDADA- 426

Query: 442 QEKLEATKRKLQERYQQAENAKRQRTIQVMEIQDIPKQGLAKPNAFGKFGNNNRQWANGR 488
             K E  KRKLQE YQ  ENAK+QRTIQV+E+  IPKQG A+     + G +NR WANGR
Sbjct: 427 --KFEFAKRKLQESYQHHENAKKQRTIQVLEM--IPKQGSAQKPQLKRPGMSNRNWANGR 436

[Close]

BLAST of Spo01952.1 vs. ExPASy Swiss-Prot
Match: MD26A_ARATH (Probable mediator of RNA polymerase II transcription subunit 26a OS=Arabidopsis thaliana GN=MED26A PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.600e-51
Identity = 167/458 (36.46%), Postives = 231/458 (50.44%), Query Frame = 1


		  
Query: 20  VGLENWRDYFRRANSDIFDIIEHAIMVAASDCPKEFRVRREKIAELLFTCRLTRCLGCDR 79
           V L+ WR+YFRR +SDIF II+HAIMVAA+D PKEF+ R ++IAELLF+C+++RC+GCD 
Sbjct: 8   VSLDTWREYFRRGDSDIFGIIDHAIMVAAADWPKEFKSRSDRIAELLFSCKVSRCIGCDH 67

Query: 80  VELAVSEVDDGEGEVKVVIKGVNDQFNVVDDDVNGGGGSKGSKVNSTTRENNYDQGVNSD 139
           +EL+++       E  V I GV            GGGG +G            D GV + 
Sbjct: 68  LELSIA-----GDEAAVEIVGV------------GGGGDRG------------DSGVATG 127

Query: 140 RDHIGEMEIDMMLNELNHESNFTFDDAEALTNEIEEAKEVAEEVLRIKEILLNSQDESDS 199
                 + +D ++              + L+N+ +E   V          LL S      
Sbjct: 128 EGEEASVSVDEVMR-----------IRDILSNKDDEKDSV----------LLES------ 187

Query: 200 VLFESLRRLQLMALDVDLLKSTEIGKAVNRIRRHSSKDIRHLARALIDGWKIIVDEWVKA 259
                LR+L+ M++ VD+LK TEIGKAVN +RRHSS  I  LA+ L   WK +VD+W+  
Sbjct: 188 -----LRKLESMSMSVDILKDTEIGKAVNGLRRHSSDKISKLAKTLFAEWKRLVDQWMNT 247

Query: 260 TQDLA-EGGTPDSVNPSTVDEEEGLPSPPLDEGAFF-STGTMDFSQFFDGMDDDGNPRNC 319
            +++A   GTP+S+N S +DEEE  PSPP D   +       + SQ  D +D DGNPR+ 
Sbjct: 248 PEEMAGTEGTPESLNLSVIDEEEAFPSPPHDLDIYAPEPNGFELSQILDCLDCDGNPRHS 307

Query: 320 GEFNKNLEVREGVRKPSLAKQDPPKRREEPPKQVTPLIRDNRVQQAKRQEPLSKPNKPLN 379
            E            K     Q    RR +       + R    QQ +R+E   +P K   
Sbjct: 308 VE-----------SKHERKSQSSAGRRPKGTNDANVVGRYCNDQQTRREEADVRPMK--- 367

Query: 380 VQSGPGRPVKPNNGELKLIKDSRVQQKPMVQRRPP-----------PQPEKMRSSNDNAV 439
                   V+P     +  K SR Q    +QR+P            PQ +K+++ + ++ 
Sbjct: 368 --HSATDVVEPK----RQTKQSREQMVSAIQRKPTAVTEQKRKLAGPQQDKLKALDPDS- 379

Query: 440 QEKLEATKRKLQERYQQAENAKRQRTIQVMEIQDIPKQ 465
             K E  KRKLQE Y Q ENAKRQRTIQV+E   IPKQ
Sbjct: 428 --KFEFAKRKLQESYHQHENAKRQRTIQVLE--TIPKQ 379

[Close]

BLAST of Spo01952.1 vs. ExPASy Swiss-Prot
Match: MD26C_ARATH (Probable mediator of RNA polymerase II transcription subunit 26c OS=Arabidopsis thaliana GN=MED26C PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 7.600e-11
Identity = 96/401 (23.94%), Postives = 162/401 (40.40%), Query Frame = 1


		  
Query: 22  LENWRDYFRRANSDIFDIIEHAIMVAASDCPKEFRVRREKIAELLF-TCRLTRCLGCD-- 81
           L+++R     A  D++  I+ AI+VA+ D  +E + RR+ I E L+ T    +C  CD  
Sbjct: 3   LDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCDFG 62

Query: 82  ----RVELAVSEVDDGEGEVKVVIKGVNDQFNVVDDDVNGGGGSKGSKVNSTTRENNYDQ 141
                 E A+  V++G          V+++    D++           V +   E   ++
Sbjct: 63  GGGNVTEAAIGRVNNGR---------VHEETEEEDEE----------GVTAAAEEEVREK 122

Query: 142 GVNSDRDHIGEMEIDMMLNELNHESNFTFDDAEALTNEIEEAKEVAEEVLRIKEILLNSQ 201
            VN + D     + D      + E     +  E L +                       
Sbjct: 123 SVNVEDDD----DFDPFAGLFDDEQKSIVEIKEKLED----------------------P 182

Query: 202 DESDSVLFESLRRLQLMALDVDLLKSTEIGKAVNRIRRHSSKDIRHLARALIDGWKIIVD 261
           D S+  L E L+ L+ M +    L+ T+IG+ VNR+R+H S ++R LA+ L+  WK  VD
Sbjct: 183 DLSEESLVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSNNVRRLAKQLVKKWKETVD 242

Query: 262 EWVKATQDLAEGGTPDSVNPSTVDEEEGLPSPPLDEGAFFSTGTMDFSQFFDGMDDDGNP 321
           EWVK  Q        D   PS + +E+      L  G+        +S           P
Sbjct: 243 EWVKFNQ------PGDLEPPSLIADEDSPVQKALHNGSRQQVPDFGYSPV---------P 302

Query: 322 RN-CGEFNKNLEVREGVRKPSLAKQDPPKRREEPPKQVTPLIRDNRVQQAKRQEPLSKPN 381
           +N     +KN  + E  RKP   +   P+ R E P    P    +R   +++  P  K +
Sbjct: 303 QNGYSSSSKNSNITEPERKP---RPVAPQPRRESPSPAKP----SRPSPSQQTIPRDKEH 335

Query: 382 KPLNVQSGPGRPVKPNNGELKLIKDSRVQQKPMVQRRPPPQ 415
           K ++  +   R ++ N  + +  K  R  Q   +   P P+
Sbjct: 363 KEVDFDTARKR-LQQNYRQAENAKKQRTIQVMDIHDIPKPK 335

[Close]

BLAST of Spo01952.1 vs. TAIR (Arabidopsis)
Match: AT5G05140.1 (Transcription elongation factor (TFIIS) family protein)

HSP 1 Score: 317.0 bits (811), Expect = 2.000e-86
Identity = 219/481 (45.53%), Postives = 288/481 (59.88%), Query Frame = 1


		  
Query: 22  LENWRDYFRR-ANSDIFDIIEHAIMVAASDCPKEFRVRREKIAELLFTCRLTRCLGCDRV 81
           L++WR+YFRR  +SDIF II+HAIMVAA+DCP +F+ RR+KIAELLF+CR+ RC+GCD +
Sbjct: 7   LDSWREYFRRRGDSDIFGIIDHAIMVAATDCPNKFKSRRDKIAELLFSCRVNRCVGCDHL 66

Query: 82  ELAVSEVDDGEGEVKVVIKGVNDQFNVVDDDVNGGGGSKGSKVNSTTRENNYDQGVNSDR 141
           EL+V     G+ E      G       VD+D    GGSK SK NS+  +NN         
Sbjct: 67  ELSVP----GDDEANRGTTGNGGGGTAVDEDYEVAGGSKESKANSSRGDNN--------- 126

Query: 142 DHIGEMEIDMMLNELNHESNFTFDDAEALTNEIEEAKEVAEEVLRIKEILLNSQDESDSV 201
                             SN+TFD+AEAL++EIEE   V++EV RIKEILLN +DE +SV
Sbjct: 127 ---------------QIVSNYTFDEAEALSDEIEEFSVVSKEVARIKEILLNKEDEPNSV 186

Query: 202 LFESLRRLQLMALDVDLLKSTEIGKAVNRIRRHSSKDIRHLARALIDGWKIIVDEWVKAT 261
           L +SLR L+LM+L+VD+LKSTEIGKAVN +R+HSS  IR LA+ LI  WK +VD+WV  T
Sbjct: 187 LLDSLRHLKLMSLNVDILKSTEIGKAVNGLRKHSSDKIRQLAKTLIAEWKELVDQWVNTT 246

Query: 262 QDLAEG-GTPDSVNPSTVDEEEGLPSPPLDEGAFF-STGTMDFSQFFDGMDDDGNPRNCG 321
           +++    GTP+S NPS +DEEE  PS P D   F       + S FFD +D DGNPRN  
Sbjct: 247 KEITGAEGTPESANPSVLDEEEAFPSLPYDVDIFTPEPNGFEISHFFDSLDFDGNPRNSE 306

Query: 322 EFNKNLEVREGVRKPSLAKQDPPKRREEPPKQVTPLIRDNRVQQAKRQEPLSKPNKPLNV 381
           E N +   RE  R+P    Q+  KR+ E  +         R+Q A  +    KP+   + 
Sbjct: 307 EHNTS---REHERRP----QNIAKRKPEGTQM--------RIQDAPFRS--IKPSSATDF 366

Query: 382 QSGPGRPVKPNNGELKLIKDSRV--QQKPMVQRR----------PPPQPEKMRSSNDNAV 441
             G  RPVK +  +    +   V   +KPM+QR+          P PQ EK++  + +A 
Sbjct: 367 -DGTRRPVKQSTEQRMKNETVSVHKSEKPMIQRKPVVTEQKRKAPGPQQEKLKGLDADA- 426

Query: 442 QEKLEATKRKLQERYQQAENAKRQRTIQVMEIQDIPKQGLAKPNAFGKFGNNNRQWANGR 488
             K E  KRKLQE YQ  ENAK+QRTIQV+E+  IPKQG A+     + G +NR WANGR
Sbjct: 427 --KFEFAKRKLQESYQHHENAKKQRTIQVLEM--IPKQGSAQKPQLKRPGMSNRNWANGR 436

[Close]

BLAST of Spo01952.1 vs. TAIR (Arabidopsis)
Match: AT3G10820.2 (Transcription elongation factor (TFIIS) family protein)

HSP 1 Score: 204.5 bits (519), Expect = 1.500e-52
Identity = 167/458 (36.46%), Postives = 231/458 (50.44%), Query Frame = 1


		  
Query: 20  VGLENWRDYFRRANSDIFDIIEHAIMVAASDCPKEFRVRREKIAELLFTCRLTRCLGCDR 79
           V L+ WR+YFRR +SDIF II+HAIMVAA+D PKEF+ R ++IAELLF+C+++RC+GCD 
Sbjct: 8   VSLDTWREYFRRGDSDIFGIIDHAIMVAAADWPKEFKSRSDRIAELLFSCKVSRCIGCDH 67

Query: 80  VELAVSEVDDGEGEVKVVIKGVNDQFNVVDDDVNGGGGSKGSKVNSTTRENNYDQGVNSD 139
           +EL+++       E  V I GV            GGGG +G            D GV + 
Sbjct: 68  LELSIA-----GDEAAVEIVGV------------GGGGDRG------------DSGVATG 127

Query: 140 RDHIGEMEIDMMLNELNHESNFTFDDAEALTNEIEEAKEVAEEVLRIKEILLNSQDESDS 199
                 + +D ++              + L+N+ +E   V          LL S      
Sbjct: 128 EGEEASVSVDEVMR-----------IRDILSNKDDEKDSV----------LLES------ 187

Query: 200 VLFESLRRLQLMALDVDLLKSTEIGKAVNRIRRHSSKDIRHLARALIDGWKIIVDEWVKA 259
                LR+L+ M++ VD+LK TEIGKAVN +RRHSS  I  LA+ L   WK +VD+W+  
Sbjct: 188 -----LRKLESMSMSVDILKDTEIGKAVNGLRRHSSDKISKLAKTLFAEWKRLVDQWMNT 247

Query: 260 TQDLA-EGGTPDSVNPSTVDEEEGLPSPPLDEGAFF-STGTMDFSQFFDGMDDDGNPRNC 319
            +++A   GTP+S+N S +DEEE  PSPP D   +       + SQ  D +D DGNPR+ 
Sbjct: 248 PEEMAGTEGTPESLNLSVIDEEEAFPSPPHDLDIYAPEPNGFELSQILDCLDCDGNPRHS 307

Query: 320 GEFNKNLEVREGVRKPSLAKQDPPKRREEPPKQVTPLIRDNRVQQAKRQEPLSKPNKPLN 379
            E            K     Q    RR +       + R    QQ +R+E   +P K   
Sbjct: 308 VE-----------SKHERKSQSSAGRRPKGTNDANVVGRYCNDQQTRREEADVRPMK--- 367

Query: 380 VQSGPGRPVKPNNGELKLIKDSRVQQKPMVQRRPP-----------PQPEKMRSSNDNAV 439
                   V+P     +  K SR Q    +QR+P            PQ +K+++ + ++ 
Sbjct: 368 --HSATDVVEPK----RQTKQSREQMVSAIQRKPTAVTEQKRKLAGPQQDKLKALDPDS- 379

Query: 440 QEKLEATKRKLQERYQQAENAKRQRTIQVMEIQDIPKQ 465
             K E  KRKLQE Y Q ENAKRQRTIQV+E   IPKQ
Sbjct: 428 --KFEFAKRKLQESYHQHENAKRQRTIQVLE--TIPKQ 379

[Close]

BLAST of Spo01952.1 vs. TAIR (Arabidopsis)
Match: AT5G09850.1 (Transcription elongation factor (TFIIS) family protein)

HSP 1 Score: 70.1 bits (170), Expect = 4.300e-12
Identity = 96/401 (23.94%), Postives = 162/401 (40.40%), Query Frame = 1


		  
Query: 22  LENWRDYFRRANSDIFDIIEHAIMVAASDCPKEFRVRREKIAELLF-TCRLTRCLGCD-- 81
           L+++R     A  D++  I+ AI+VA+ D  +E + RR+ I E L+ T    +C  CD  
Sbjct: 3   LDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCDFG 62

Query: 82  ----RVELAVSEVDDGEGEVKVVIKGVNDQFNVVDDDVNGGGGSKGSKVNSTTRENNYDQ 141
                 E A+  V++G          V+++    D++           V +   E   ++
Sbjct: 63  GGGNVTEAAIGRVNNGR---------VHEETEEEDEE----------GVTAAAEEEVREK 122

Query: 142 GVNSDRDHIGEMEIDMMLNELNHESNFTFDDAEALTNEIEEAKEVAEEVLRIKEILLNSQ 201
            VN + D     + D      + E     +  E L +                       
Sbjct: 123 SVNVEDDD----DFDPFAGLFDDEQKSIVEIKEKLED----------------------P 182

Query: 202 DESDSVLFESLRRLQLMALDVDLLKSTEIGKAVNRIRRHSSKDIRHLARALIDGWKIIVD 261
           D S+  L E L+ L+ M +    L+ T+IG+ VNR+R+H S ++R LA+ L+  WK  VD
Sbjct: 183 DLSEESLVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSNNVRRLAKQLVKKWKETVD 242

Query: 262 EWVKATQDLAEGGTPDSVNPSTVDEEEGLPSPPLDEGAFFSTGTMDFSQFFDGMDDDGNP 321
           EWVK  Q        D   PS + +E+      L  G+        +S           P
Sbjct: 243 EWVKFNQ------PGDLEPPSLIADEDSPVQKALHNGSRQQVPDFGYSPV---------P 302

Query: 322 RN-CGEFNKNLEVREGVRKPSLAKQDPPKRREEPPKQVTPLIRDNRVQQAKRQEPLSKPN 381
           +N     +KN  + E  RKP   +   P+ R E P    P    +R   +++  P  K +
Sbjct: 303 QNGYSSSSKNSNITEPERKP---RPVAPQPRRESPSPAKP----SRPSPSQQTIPRDKEH 335

Query: 382 KPLNVQSGPGRPVKPNNGELKLIKDSRVQQKPMVQRRPPPQ 415
           K ++  +   R ++ N  + +  K  R  Q   +   P P+
Sbjct: 363 KEVDFDTARKR-LQQNYRQAENAKKQRTIQVMDIHDIPKPK 335

The following BLAST results are available for this feature:

BLAST of Spo01952.1 vs. NCBI nr
BLAST of Spo01952.1 vs. UniProtKB/TrEMBL
BLAST of Spo01952.1 vs. ExPASy Swiss-Prot
BLAST of Spo01952.1 vs. TAIR (Arabidopsis)

BLAST of Spo01952.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902120555\|gb\|KNA03984.1\|	2.1e-271	99.7	hypothetical protein SOVF_2039...	[more]
gi\|902120556\|gb\|KNA03985.1\|	1.2e-269	99.5	hypothetical protein SOVF_2039...	[more]
gi\|731324608\|ref\|XP_010673062.1\|	1.2e-205	79.0	PREDICTED: probable mediator o...	[more]
gi\|224139692\|ref\|XP_002323230.1\|	1.2e-125	55.8	hypothetical protein POPTR_001...	[more]
gi\|255552481\|ref\|XP_002517284.1\|	1.6e-125	57.0	PREDICTED: probable mediator o...	[more]

BLAST of Spo01952.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9Q9Q3_SPIOL	1.5e-271	99.7	Uncharacterized protein OS=Spi...	[more]
A0A0K9Q9N3_SPIOL	8.1e-270	99.5	Uncharacterized protein OS=Spi...	[more]
A0A0J8FH35_BETVU	8.3e-206	79.0	Uncharacterized protein OS=Bet...	[more]
B9IHN3_POPTR	8.5e-126	55.8	Uncharacterized protein OS=Pop...	[more]
B9RU65_RICCO	1.1e-125	57.0	Putative uncharacterized prote...	[more]

BLAST of Spo01952.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3


Match Name	E-value	Identity	Description
MD26B_ARATH	3.6e-85	45.5	Probable mediator of RNA polym...	[more]
MD26A_ARATH	2.6e-51	36.4	Probable mediator of RNA polym...	[more]
MD26C_ARATH	7.6e-11	23.9	Probable mediator of RNA polym...	[more]

BLAST of Spo01952.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT5G05140.1	2.0e-86	45.5	Transcription elongation facto...	[more]
AT3G10820.2	1.5e-52	36.4	Transcription elongation facto...	[more]
AT5G09850.1	4.3e-12	23.9	Transcription elongation facto...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003617	Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type	SMART	SM00509	TFS2_5	coord: 180..255 score: 6.2
IPR017923	Transcription factor IIS, N-terminal	GENE3D	1.20.930.10		coord: 177..262 score: 9.1
IPR017923	Transcription factor IIS, N-terminal	PFAM	PF08711	Med26	coord: 205..252 score: 7.8
IPR017923	Transcription factor IIS, N-terminal	PROFILE	PS51319	TFIIS_N	coord: 181..256 score: 23
IPR017923	Transcription factor IIS, N-terminal	unknown	SSF47676	Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	coord: 179..266 score: 1.57
None	No IPR available	unknown	Coil	Coil	coord: 166..186 score: -coord: 427..454 scor
None	No IPR available	PANTHER	PTHR15141	TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3	coord: 20..487 score: 1.6E
None	No IPR available	PANTHER	PTHR15141:SF40	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED	coord: 20..487 score: 1.6E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding