Spo01993.1 (mRNA) | SpinachBase

Overview


Name	Spo01993.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	RWD domain-containing family protein
Location	chr2 : 45953410 .. 45959008 (-)
Sequence length	1910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTATGTATGATTACTTTTCTTTAGATTTTCACATTTTTAATCCATGTTGAATTGATTCCCAAACTCCTATTTCCACTTCAAACTCCCGCAGAACAAACACCCCCTTATTGTTATACGTAATCGAGAAAGAATTGATTCTTCAAACATTCCATATACCCATAGCGCCGAGCTCAAAAACCCCTCTTTCCCCTTTCTCTCTTCTCTCTCCAGCGGGCAGCGGGCAGCGGGCAGCGGGCAACGGGCAACCTTCTTCAATGGCGGAAGAAGAGGAAGTAAGAATGGAAGTAGAAGCTGCAGAAGCCGTTTATGGCGATGACTGTATCATCCTCAACAGATTTCCTCCACACCTTCATCTCCACATCAAACCTCGTACCGCCGACGTCGATTCTCAACAGGTCTATTTCCATCTATTTTTTGTATTTTAATTCTTTAATATCGTGGATTTAATTTCTCAATTCACCAATTTATTAGCTAATTCTACACCTTTTCAAATAAAATAAATTGAGCTTGCTGTGATTGTGATTATCATTCTCTTTTCTATTATTATTGCAAAATCAAGGTTGAAAGGTGTTATTAATGCATACTTTTAGCTTCTTATGGTCATTTTCCTTGGAAAATATGATCAATTTACTTTGGTGGCAGCCTTTTGTTTCACTATCTATTACAGATTTACAGAAGCTAATAATTAATTGGAATTTGGATTTTTGATATGAAATTATATGTTTATGAAGAAATTAGTAAAGCCCTAAGGTTTAGGAATTGAGGAAGGGAGTGTAAATAATGTACAACAAGAAAATGACTTGTTACAAGTTGTTTGCCCAATTTGAGAATCCTCTGGAATTGGAGTTTTACGGCCAGACCTCGAGCTATTGGTGTGCGAACAAAAGGAACTTCTGAGGATTTTGTTTATTGATGATTGATCGTAACACTTAGTTTATCATCCTATCCATTTTGGTGGAGCTAATGTATTTGTGTATTAGAGAGAAGACTATGACTCCATTTTGGTGGAGCTAATGTATTTGTGATTTAGAAAGAAGACTATGACTCCTGTTTTTCTTATTCTTGAAAACCTAGTTCCGAAGAGGTGATTGAGAAATAACAAAACGATTCAAGAACTGTCTTTTCGACTAAAGGAAATTTCCACTGTCAATAAAGAATACGATTACCAAAGTAAAACATACCAAAGAATGAATAATATTATCAATGTCGGAGTAATCAGTGTGACTGATGTCCACAATTTACCAATAGTACATCAACCAATATCAAATTCTAGCCAATTAGGTGACCCCTAACTAGTGCCTACTAAATTGCTAGACTTCGGTATTTGTGGTCTCTCCTTGTAGCAACTCCATAAAGCAAGTAGTAGGCGGCAGAGGAGACTACATCAGCTTATTTCTCTAGGATCTAGACTCATTGATCTTAGACCTGAGACATTTATTGTTACATCTTTGCAAGTTTATTGTAACTTGCTCGCCTTGACTTATGCAGTGTAAAACCATAACAAAAGCGTTTTTCATCTTTTCTGTAGTTTGTGGAAGCAACTATTGAGTTACGGGCTGGTCCGCAGGTATCGTTTTTAATCTTTGTATATAAAAAACCCCTCTCTAGTTTTGGATAATCACGAGTCATAAGATGAAATTGCTACAGAAAATGACATAAACTGACGTCTCATCAAGAAGAAGTTGCATGTTTCTACAATCTGAGTGTTTGCAGTTGCTACTGCTATATATTTGAAAGAAAACATTTTACAGTTCACTTGCTTGGTTTTTACCTACTTCCAGTCTAATATTTCCTTCAATTTGTGGCAGTATCCCAGTGATACACCTTATGTTGGTATTATAGGTTCTAAAGGACTTGATGAGAAAAGGCAAAAGCATCTGATCAGTGGTTTACATGACAAGGCTGATGAACTAACTTCTTGTTCAATGCTTGTTGCACTTTGTGAGGTAATCTTATTCATTTTTCTTGTAAATGCGTGATGTGCAAAAAGTAAATTTATTGTCTTCCTATCAAAATAACTTTTTTTGTTTTTTCTTTGACTCGGGAACGTAGGATTAACAAAATTTCTGTGACTAAAGTAGCTTCTCATGTAGTTCTGCATTTGCTATATAAAGTGGTTTTCTTGAACCCTGAACAAGTATGAGAAACATTTGATACTTTTTCCAAGTAATAACTTTTTGACTTAACTTATTTGAAATGGAAAGTGGAAGCTTTTCCTGACATTTGGATATTGTAATGTTAAATGCAATGCTATATGGAGAGAGTATTGGTCTGTACTGGCGTGTTGATGTTTTCTATTTGCGAATAGATGATTACGTTGTTCTCACCTCTGGACAAATGCCATTTCTATAGATGTACACCGTGTGTTTTGTTTATGAATGTATGCGCGAGTGCACATGCGTCTTTGCTATTAATGGAGAACTCTTACCTTGAGCTCGTTCATGTGTCTCTTCATTTCAGCCTGCTTATAAGGAGGTTATCCTTCCTGTCACTATTTACTTTGTACTCTTTATTGACAACTATATTTTGATAGAAGGGTATGGTCTATACAGTTTAGCTTTGTGCAATTGTGTGTCTCAACTGTTTTAGGTAAATCTGTTACTTCCCAAGGCCTAGTTAATGCTGGATCTATTCCCAGCTTCTGTCACTGTTACCTTAATTGTGTTCCAATGTGTTTTGCTTTCTGTTTTAAATAAAAGATTATTTACGAATTGGGCTTGTGAATTTCTTATTTTTTCACAACAGTGCCTGTAGTTATACATCTATAGTATATACTTCCTCTCTCGTGAATTACTATTTTTTGCAACAGGAAGCAGTGGAAATACTTACCAGCATGAACCATCCTGAAGGTGACTGTCCATTGTGCTTATATCCTTTGGTACCAGAAGATAAGAACAGTGAAGCCCAGCCATTTATGAAGCTAATGTCTTGCTTTCACTGCTTCCACTGGTAAAGCCTAAATCCGTTTTCCTGTAATGTGCATCAGATGACCGATTGCATTCATCTCTTTAAACTGTTTTCTTGATTTTACCTGTGTTGATGTAGTGAGTGCATTGTAAGATGGTTGAAATGGATCCAGAAACAGAATGAAACCTGCCGTGGAACCTCAAGTACTAAGTCATCTACCGTTGATGAAGAAAATGATCTGGTTTCAGGCAAGACATGTTAATCAATCTACGTTGTACTTACTCTCCGACTAATTTTTTTTGTCTAGCTGTCTAAAAGTGTGTGCATGCTGTATATAATTCAATGAGTCAGGATTCTATATTGATAGTTCTTGATTTTGAGGTCATAGAGGCAGACTTCACTGACTACCTTACACTAAATTTGGATAGGAAGATTTGGAGGGAAAAGGAGGGAAGGGAAAGTGAGGGATATATTTCCCCTTATTTGGACAAAAAACAAGGAAGGGAAGGGATCCATTTTCCTTCCTCTTTTAATGAATCAAATCCCTCCAATGTTGGAAAGATTTGGAAGGAAAATGGAAGCTCACTCTTTCCCTTTCCTCCCTTATCCTCCACAAGTGCTAACCAAATAAAGTGTTGCTGTTTTTGTATGTCATGTGTTAGCTCAACTTATGAATGACACTATTTCTGCAAAACGATGCGAGTATAATTTACATTAGCAAAAGGTTTGTTTGTTTATTCTCATGTACAATCTTGATAAGTCAAACTGAAAATCAGCGATTATTTGAATGATGTGCATGTGCCCCCCCTCCCCCCGAGAAAGAAAAACAACAATGGTTCTAATTCTGATGCATGAGGCAGTCGATTTTTCTTGAGCTGTTACTATTATACGACTCTTTCAATTAAAACCAGTCCATGGAGATTTGACCATGGTATTTCATTGATAGTAAGTTAAATATGCTAGTTAGAATGAAGGAACAGACCAGCTCATCAAAGTGAGAAGTTACAAATTTAATGCTTTTGACTTTTAGATTTTGTCGTGTTTGTAAAATGTTCTGTCAATTACAAGTTTAAGCTGCTACCTTACTAACAATTTTAACTTTTTAAGCACATGTGATTAAGAAGGGAAGTCATGCCTTTCTGCATGTTTGTTTTCCTCTGATTCTGTAAACTAATTTTTCGCCAGATTTATGCAAAGTGATGGGAAATAGTACAGGAAACTGTCCTGTCTGTCGTAAAGTCTTCCTTGCCAAGGACATTGATCATGTGCTCAACTTGGTTGGTTCTCATGATGCAGATTCGGTATGTAGTAATGGATTTCTTTTTCATAAATTTTGTTTTCATGATTACTCGTAACAGACTTCAGGGGAAGACACTGTCACACTAGTAGTCCCGATGTTAAATTAGAAAATTTTAATTTCTAACCAGAAAGAGAGCATGTGCTCAGTAGCAGTGGCAGGAGTAGAGAATTATGAATGGAGATGATACTTGACTTGTCCAGTTATGTAGTAAGATGAGAAGTACTGAGTAAGTCAGTGATGTTTGTGGTTCGTGTGTATGAACTAAACCTGCTAGCACTGCTAGGGACTAGTGCTTCTACAGTTCATGAGTTCATGACACCTACACATTGTTTGTAGATACAGAAGACCCTTGGGAACAACTAGAACCTGTATAATCATATATTGTGCTCAAAACTCATGTCTTTGTCTGTAAATCTTCAGGATGTTTATGAGAAAGAACTCGTGGAGAAAGTCCTCCAATGTGATCTAGAGACCAGTAGAAGACAGAAGTTTGAGACAATCTTGGAGCTGCAACAACAGTATGGTGGCTTGATTGAACCCCCTAAAGACAATGTATTGTTTTCACGCCTCTCTCTTCAAGAGTTGGTCAGGGAGGATACAGAGGTTACGAATGGAGAAGCCAATGAGCAACAGCATAACAATCAAATAGTCAGAGAAGAACCAGAGTCAAGTAGTTCCACAAATCGGTCCCGTGAAACAAGGAAGCAACATCAAAGAGGTCACACCGTAGTGGTGGAGCCTACATCAAATGGTCCTTCAACTAGGCCTAGTGCTGGGCAGCGCAGGCATTCTGGTACTAGAAGACATAGTAAGAATTATCCTAGATGGCAACCCAAGCCGACTCCTGGGAAGGAATAAGATATATGTGGTTTAGGTACCTTTTTCCTACTCTGTTCCGATGGCTGTTGGGAAAAGCCTGTAATACAGTATAGGTATTTATCTATGTGCATAGGTTTTGTCGATAAGAAAAGAGAATCGAAATTGTTCTGTGATGAGTTCATTTTTACTTATTTTTGGCTCCTGTTTTTGTGTTTCACCCTCCAGCTTCTAGTATTTGTTGGAGCTGAGTGGATGAAAGTTGGAACAAGAGTGTATTTACCATTTTGTTGGATTTGGAATGAAGGGTTCGCGTTCTTCTGCGTTATACAGCAGAAAATTGCTTGGTACCCTTTGGGTGTTAATTGTTGAATGGTTTAAATTTTTCTCGGGTGTTCAACAGGATTGTTACAGACTTGTAGATTTTTTTTTTTTTTTTGGTGTACCATCCGGTTCACCCTTAGGGTTAATCCGGATTCGGGGCGAGTTCTGAGTGGATAGGTTCCATTCCCCTCCCAATTGTTGTTGCGGGGGATCGAACACGGGTCCTCCCTACCAAGTTCAGCCTCAATCA

mRNA sequence

ATTTATGTATGATTACTTTTCTTTAGATTTTCACATTTTTAATCCATGTTGAATTGATTCCCAAACTCCTATTTCCACTTCAAACTCCCGCAGAACAAACACCCCCTTATTGTTATACGTAATCGAGAAAGAATTGATTCTTCAAACATTCCATATACCCATAGCGCCGAGCTCAAAAACCCCTCTTTCCCCTTTCTCTCTTCTCTCTCCAGCGGGCAGCGGGCAGCGGGCAGCGGGCAACGGGCAACCTTCTTCAATGGCGGAAGAAGAGGAAGTAAGAATGGAAGTAGAAGCTGCAGAAGCCGTTTATGGCGATGACTGTATCATCCTCAACAGATTTCCTCCACACCTTCATCTCCACATCAAACCTCGTACCGCCGACGTCGATTCTCAACAGTTTGTGGAAGCAACTATTGAGTTACGGGCTGGTCCGCAGTATCCCAGTGATACACCTTATGTTGGTATTATAGGTTCTAAAGGACTTGATGAGAAAAGGCAAAAGCATCTGATCAGTGGTTTACATGACAAGGCTGATGAACTAACTTCTTGTTCAATGCTTGTTGCACTTTGTGAGGAAGCAGTGGAAATACTTACCAGCATGAACCATCCTGAAGGTGACTGTCCATTGTGCTTATATCCTTTGGTACCAGAAGATAAGAACAGTGAAGCCCAGCCATTTATGAAGCTAATGTCTTGCTTTCACTGCTTCCACTGTGAGTGCATTGTAAGATGGTTGAAATGGATCCAGAAACAGAATGAAACCTGCCGTGGAACCTCAAGTACTAAGTCATCTACCGTTGATGAAGAAAATGATCTGGTTTCAGATTTATGCAAAGTGATGGGAAATAGTACAGGAAACTGTCCTGTCTGTCGTAAAGTCTTCCTTGCCAAGGACATTGATCATGTGCTCAACTTGGTTGGTTCTCATGATGCAGATTCGGATGTTTATGAGAAAGAACTCGTGGAGAAAGTCCTCCAATGTGATCTAGAGACCAGTAGAAGACAGAAGTTTGAGACAATCTTGGAGCTGCAACAACAGTATGGTGGCTTGATTGAACCCCCTAAAGACAATGTATTGTTTTCACGCCTCTCTCTTCAAGAGTTGGTCAGGGAGGATACAGAGGTTACGAATGGAGAAGCCAATGAGCAACAGCATAACAATCAAATAGTCAGAGAAGAACCAGAGTCAAGTAGTTCCACAAATCGGTCCCGTGAAACAAGGAAGCAACATCAAAGAGGTCACACCGTAGTGGTGGAGCCTACATCAAATGGTCCTTCAACTAGGCCTAGTGCTGGGCAGCGCAGGCATTCTGGTACTAGAAGACATAGTAAGAATTATCCTAGATGGCAACCCAAGCCGACTCCTGGGAAGGAATAAGATATATGTGGTTTAGGTACCTTTTTCCTACTCTGTTCCGATGGCTGTTGGGAAAAGCCTGTAATACAGTATAGGTATTTATCTATGTGCATAGGTTTTGTCGATAAGAAAAGAGAATCGAAATTGTTCTGTGATGAGTTCATTTTTACTTATTTTTGGCTCCTGTTTTTGTGTTTCACCCTCCAGCTTCTAGTATTTGTTGGAGCTGAGTGGATGAAAGTTGGAACAAGAGTGTATTTACCATTTTGTTGGATTTGGAATGAAGGGTTCGCGTTCTTCTGCGTTATACAGCAGAAAATTGCTTGGTACCCTTTGGGTGTTAATTGTTGAATGGTTTAAATTTTTCTCGGGTGTTCAACAGGATTGTTACAGACTTGTAGATTTTTTTTTTTTTTTTGGTGTACCATCCGGTTCACCCTTAGGGTTAATCCGGATTCGGGGCGAGTTCTGAGTGGATAGGTTCCATTCCCCTCCCAATTGTTGTTGCGGGGGATCGAACACGGGTCCTCCCTACCAAGTTCAGCCTCAATCA

Coding sequence (CDS)

ATGGCGGAAGAAGAGGAAGTAAGAATGGAAGTAGAAGCTGCAGAAGCCGTTTATGGCGATGACTGTATCATCCTCAACAGATTTCCTCCACACCTTCATCTCCACATCAAACCTCGTACCGCCGACGTCGATTCTCAACAGTTTGTGGAAGCAACTATTGAGTTACGGGCTGGTCCGCAGTATCCCAGTGATACACCTTATGTTGGTATTATAGGTTCTAAAGGACTTGATGAGAAAAGGCAAAAGCATCTGATCAGTGGTTTACATGACAAGGCTGATGAACTAACTTCTTGTTCAATGCTTGTTGCACTTTGTGAGGAAGCAGTGGAAATACTTACCAGCATGAACCATCCTGAAGGTGACTGTCCATTGTGCTTATATCCTTTGGTACCAGAAGATAAGAACAGTGAAGCCCAGCCATTTATGAAGCTAATGTCTTGCTTTCACTGCTTCCACTGTGAGTGCATTGTAAGATGGTTGAAATGGATCCAGAAACAGAATGAAACCTGCCGTGGAACCTCAAGTACTAAGTCATCTACCGTTGATGAAGAAAATGATCTGGTTTCAGATTTATGCAAAGTGATGGGAAATAGTACAGGAAACTGTCCTGTCTGTCGTAAAGTCTTCCTTGCCAAGGACATTGATCATGTGCTCAACTTGGTTGGTTCTCATGATGCAGATTCGGATGTTTATGAGAAAGAACTCGTGGAGAAAGTCCTCCAATGTGATCTAGAGACCAGTAGAAGACAGAAGTTTGAGACAATCTTGGAGCTGCAACAACAGTATGGTGGCTTGATTGAACCCCCTAAAGACAATGTATTGTTTTCACGCCTCTCTCTTCAAGAGTTGGTCAGGGAGGATACAGAGGTTACGAATGGAGAAGCCAATGAGCAACAGCATAACAATCAAATAGTCAGAGAAGAACCAGAGTCAAGTAGTTCCACAAATCGGTCCCGTGAAACAAGGAAGCAACATCAAAGAGGTCACACCGTAGTGGTGGAGCCTACATCAAATGGTCCTTCAACTAGGCCTAGTGCTGGGCAGCGCAGGCATTCTGGTACTAGAAGACATAGTAAGAATTATCCTAGATGGCAACCCAAGCCGACTCCTGGGAAGGAATAA

Protein sequence

MAEEEEVRMEVEAAEAVYGDDCIILNRFPPHLHLHIKPRTADVDSQQFVEATIELRAGPQYPSDTPYVGIIGSKGLDEKRQKHLISGLHDKADELTSCSMLVALCEEAVEILTSMNHPEGDCPLCLYPLVPEDKNSEAQPFMKLMSCFHCFHCECIVRWLKWIQKQNETCRGTSSTKSSTVDEENDLVSDLCKVMGNSTGNCPVCRKVFLAKDIDHVLNLVGSHDADSDVYEKELVEKVLQCDLETSRRQKFETILELQQQYGGLIEPPKDNVLFSRLSLQELVREDTEVTNGEANEQQHNNQIVREEPESSSSTNRSRETRKQHQRGHTVVVEPTSNGPSTRPSAGQRRHSGTRRHSKNYPRWQPKPTPGKE

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo01993	Spo01993	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo01993.1	Spo01993.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01993.1.utr5p.1	Spo01993.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01993.1.CDS.7	Spo01993.1.CDS.7	CDS
Spo01993.1.CDS.6	Spo01993.1.CDS.6	CDS
Spo01993.1.CDS.5	Spo01993.1.CDS.5	CDS
Spo01993.1.CDS.4	Spo01993.1.CDS.4	CDS
Spo01993.1.CDS.3	Spo01993.1.CDS.3	CDS
Spo01993.1.CDS.2	Spo01993.1.CDS.2	CDS
Spo01993.1.CDS.1	Spo01993.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01993.1.utr3p.1	Spo01993.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01993.1.exon.7	Spo01993.1.exon.7	exon
Spo01993.1.exon.6	Spo01993.1.exon.6	exon
Spo01993.1.exon.5	Spo01993.1.exon.5	exon
Spo01993.1.exon.4	Spo01993.1.exon.4	exon
Spo01993.1.exon.3	Spo01993.1.exon.3	exon
Spo01993.1.exon.2	Spo01993.1.exon.2	exon
Spo01993.1.exon.1	Spo01993.1.exon.1	exon

Homology

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BLAST of Spo01993.1 vs. NCBI nr
Match: gi|902190992|gb|KNA11743.1| (hypothetical protein SOVF_132340 [Spinacia oleracea])

HSP 1 Score: 757.7 bits (1955), Expect = 9.700e-216
Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 1


		  
Query: 1   MAEEEEVRMEVEAAEAVYGDDCIILNRFPPHLHLHIKPRTADVDSQQFVEATIELRAGPQ 60
           MAEEEEVRMEVEAAEAVYGDDCIILNRFPPHLHLHIKPRTADVDSQQFVEATIELRAGPQ
Sbjct: 1   MAEEEEVRMEVEAAEAVYGDDCIILNRFPPHLHLHIKPRTADVDSQQFVEATIELRAGPQ 60

Query: 61  YPSDTPYVGIIGSKGLDEKRQKHLISGLHDKADELTSCSMLVALCEEAVEILTSMNHPEG 120
           YPSDTPYVGIIGSKGLDEKRQKHLISGLHDKADELTSCSMLVALCEEAVEILTSMNHPEG
Sbjct: 61  YPSDTPYVGIIGSKGLDEKRQKHLISGLHDKADELTSCSMLVALCEEAVEILTSMNHPEG 120

Query: 121 DCPLCLYPLVPEDKNSEAQPFMKLMSCFHCFHCECIVRWLKWIQKQNETCRGTSSTKSST 180
           DCPLCLYPLVPEDKNSEAQPFMKLMSCFHCFHCECIVRWLKWIQKQNETCRGTSSTKSST
Sbjct: 121 DCPLCLYPLVPEDKNSEAQPFMKLMSCFHCFHCECIVRWLKWIQKQNETCRGTSSTKSST 180

Query: 181 VDEENDLVSDLCKVMGNSTGNCPVCRKVFLAKDIDHVLNLVGSHDADSDVYEKELVEKVL 240
           VDEENDLVSDLCKVMGNSTGNCPVCRKVFLAKDIDHVLNLVGSHDADSDVYEKELVEKVL
Sbjct: 181 VDEENDLVSDLCKVMGNSTGNCPVCRKVFLAKDIDHVLNLVGSHDADSDVYEKELVEKVL 240

Query: 241 QCDLETSRRQKFETILELQQQYGGLIEPPKDNVLFSRLSLQELVREDTEVTNGEANEQQH 300
           QCDLETSRRQKFETILELQQQYGGLIEPPKDNVLFSRLSLQELVREDTEVTNGEANEQQH
Sbjct: 241 QCDLETSRRQKFETILELQQQYGGLIEPPKDNVLFSRLSLQELVREDTEVTNGEANEQQH 300

Query: 301 NNQIVREEPESSSSTNRSRETRKQHQRGHTVVVEPTSNGPSTRPSAGQRRHSGTRRHSKN 360
           NNQIVREEPESSSSTNRSRETRKQHQRGHTVVVEPTSNGPSTRPSAGQRRHSGTRRHSKN
Sbjct: 301 NNQIVREEPESSSSTNRSRETRKQHQRGHTVVVEPTSNGPSTRPSAGQRRHSGTRRHSKN 360

Query: 361 YPRWQPKPTPGKE 374
           YPRWQPKPTPGKE
Sbjct: 361 YPRWQPKPTPGKE 373

[Close]

BLAST of Spo01993.1 vs. NCBI nr
Match: gi|731360858|ref|XP_010692045.1| (PREDICTED: E3 ubiquitin-protein ligase RNF25 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 593.2 bits (1528), Expect = 3.200e-166
Identity = 292/370 (78.92%), Postives = 321/370 (86.76%), Query Frame = 1


		  
Query: 1   MAEEEEVRMEVEAAEAVYGDDCIILNRFPPHLHLHIKPRTADVDSQQFVEATIELRAGPQ 60
           MAEEEEVRMEVEA EAVYGDDCI+LNRFPPHLHLHIKPRTADV  QQFVEATIELRAGPQ
Sbjct: 1   MAEEEEVRMEVEAVEAVYGDDCIVLNRFPPHLHLHIKPRTADVHFQQFVEATIELRAGPQ 60

Query: 61  YPSDTPYVGIIGSKGLDEKRQKHLISGLHDKADELTSCSMLVALCEEAVEILTSMNHPEG 120
           YPSD PYVGIIGSKGLDEKR KHL +GLHD A EL SC MLVALCEEAVE LTSMNHPEG
Sbjct: 61  YPSDPPYVGIIGSKGLDEKRLKHLSNGLHDMAHELASCLMLVALCEEAVERLTSMNHPEG 120

Query: 121 DCPLCLYPLVPEDKNSEAQPFMKLMSCFHCFHCECIVRWLKWIQKQNETCRGTSSTKSST 180
           DCPLCLYPLVPED++SE++PFMKLMSCFHCFHCECIVRWLKWI K+NE C   SS+ SS 
Sbjct: 121 DCPLCLYPLVPEDRHSESEPFMKLMSCFHCFHCECIVRWLKWILKENEACCRISSSLSSI 180

Query: 181 VDEENDLVSDLCKVMGNSTGNCPVCRKVFLAKDIDHVLNLVGSHDADSDVYEKELVEKVL 240
           ++EE +L+SDL ++MG++TGNCPVCRKVFLAKDI+HVLNL GSH+ DSDVY+KELVEKVL
Sbjct: 181 INEEKELISDLRQMMGDNTGNCPVCRKVFLAKDIEHVLNLAGSHEPDSDVYDKELVEKVL 240

Query: 241 QCDLETSRRQKFETILELQQQYGGLIEPPKDNVLFSRLSLQELVREDTEVTNGEANEQQH 300
           QCDLETSRR+KFE ILELQQQ+GGLIEPPK NVLFSRLSLQ+LVRED +  N   +EQQ 
Sbjct: 241 QCDLETSRRRKFEAILELQQQHGGLIEPPKGNVLFSRLSLQDLVREDADAMNDGTSEQQQ 300

Query: 301 NNQIVREEPESSSSTNRSRETRKQHQRGHTVVVEPTSNGPSTRPSAGQRRHSGTRRHSKN 360
            N I REEPESSSS+NR+R  R+QHQRGHTVVVEP S GP TR SAGQ  HSG R+H + 
Sbjct: 301 TNHIGREEPESSSSSNRTRGRRRQHQRGHTVVVEPASRGPQTRSSAGQHGHSGMRKHGRY 360

Query: 361 YPRWQPKPTP 371
           Y R Q KP P
Sbjct: 361 YSRVQAKPRP 370

[Close]

BLAST of Spo01993.1 vs. NCBI nr
Match: gi|802700413|ref|XP_012083707.1| (PREDICTED: uncharacterized protein LOC105643225 [Jatropha curcas])

HSP 1 Score: 350.1 bits (897), Expect = 4.700e-93
Identity = 184/358 (51.40%), Postives = 241/358 (67.32%), Query Frame = 1


		  
Query: 1   MAEEEEVRMEVEAAEAVYGDDCIILNRFPPHLHLHIKPRTADVDSQQFVEATIELRAGPQ 60
           MA+ EE+ +EVEA +AVYGDDC++++ FPP+LH+H+KPRTADV SQQFVEA I +RAGPQ
Sbjct: 1   MAQVEEILIEVEAVQAVYGDDCVVVDSFPPYLHVHVKPRTADVSSQQFVEAVIGIRAGPQ 60

Query: 61  YPSDTPYVGIIGSKGLDEKRQKHLISGLHDKADELTSCSMLVALCEEAVEILTSMNHPEG 120
           YP   PY+ +I SKGLDE+RQKHL++ + ++A EL+SC MLVALCEEAVE L+ MNHPEG
Sbjct: 61  YPEKPPYIDLIESKGLDEQRQKHLVTSIRNRACELSSCLMLVALCEEAVEELSVMNHPEG 120

Query: 121 DCPLCLYPLVPEDKNSEAQPFMKLMSCFHCFHCECIVRWLKWIQKQNETCRGTSSTKSST 180
           +CPLCL PLV ED+ +EA PFMKLMSCFHCFH ECI+RW  W+QK+ E+   TSST +  
Sbjct: 121 NCPLCLCPLVLEDEQNEALPFMKLMSCFHCFHSECIIRWWNWLQKERESNTNTSSTSALH 180

Query: 181 VDEENDLVSDLCKVMGNSTGNCPVCRKVFLAKDIDHVLNLVGSH--DADSDVYEKELVEK 240
              + +  +D+  +   S GNCPVCRKVF  KD +HVL LVG+H  +  SD  E E  EK
Sbjct: 181 CIRDGENENDMQGINEESMGNCPVCRKVFHTKDFEHVLGLVGAHRTELSSDRTEVE-DEK 240

Query: 241 VLQCDLETSRRQKFETILELQQQYGGLIEPPKDNVLFSRLSLQELVREDTEVTNGEANEQ 300
           +LQ D E  RRQKFE +L+LQ++  GLIEP K+ V+   + L + VR+ T+    E  E+
Sbjct: 241 LLQSDSENIRRQKFEAVLKLQEENSGLIEPKKNLVVLPGMYLPQSVRQPTQALEKENAEE 300

Query: 301 QHNNQIVREEPESSSSTNRSRETRKQHQRGHTVVVEPTSNGPSTRPSAGQRRHSGTRR 357
           Q      R+    S+ TN                    S   S RPS+ + R++G R+
Sbjct: 301 QQ-----RDSTAGSTETN--------------------SGVLSNRPSSSEHRNTGRRK 332

[Close]

BLAST of Spo01993.1 vs. NCBI nr
Match: gi|255541032|ref|XP_002511580.1| (PREDICTED: E3 ubiquitin-protein ligase RNF25 [Ricinus communis])

HSP 1 Score: 345.9 bits (886), Expect = 8.800e-92
Identity = 175/327 (53.52%), Postives = 231/327 (70.64%), Query Frame = 1


		  
Query: 3   EEEEVRMEVEAAEAVYGDDCIILNRFPPHLHLHIKPRTADVDSQQFVEATIELRAGPQYP 62
           EEEEV +EVEA +A+YGDDC++++ FPPHLH+HIKPRTADV SQQFVEA I +RAGP+YP
Sbjct: 6   EEEEVLIEVEAVQAMYGDDCVVIDSFPPHLHVHIKPRTADVSSQQFVEAIIGIRAGPKYP 65

Query: 63  SDTPYVGIIGSKGLDEKRQKHLISGLHDKADELTSCSMLVALCEEAVEILTSMNHPEGDC 122
           ++ P + +I SKGLD++RQK LIS + DKA EL+SC MLVALCEEAVE L+ MNHP+G+C
Sbjct: 66  NEPPCINLIESKGLDDQRQKQLISSIQDKACELSSCLMLVALCEEAVEKLSIMNHPDGNC 125

Query: 123 PLCLYPLVPEDKNSEAQPFMKLMSCFHCFHCECIVRWLKWIQKQNETCRGTSSTKSSTVD 182
           PLCLYPLVPED+  E  PFMKLMSCFHCFH ECI+RW  W+QK+ ++   +SS  +    
Sbjct: 126 PLCLYPLVPEDEPDETLPFMKLMSCFHCFHSECIMRWWNWLQKEKDSNASSSSITTVHFV 185

Query: 183 EENDLVSDLCKVMGNSTGNCPVCRKVFLAKDIDHVLNLVGSHDADSDVYEKELVEKVLQC 242
           E     + + ++MG S GNCPVCRKVF  KD +HVL+LVG H  +     KE+ +++LQ 
Sbjct: 186 EGRVNQNAIHELMGESLGNCPVCRKVFHTKDFEHVLSLVGVHCFELSSDRKEVNKELLQS 245

Query: 243 DLETSRRQKFETILELQQQYGGLIEPPKDNVLFSRLSLQELVREDTEVTNGEANEQQHNN 302
           D E+ RRQKFE +L+LQQ+  GLIEP K  V+   + L + V    ++ N E   +   +
Sbjct: 246 DSESIRRQKFEALLKLQQENNGLIEPKKSLVVLPGMYLPQPVTVPAQMVNKETTVETQRD 305

Query: 303 QIVREEPESSSSTNR--SRETRKQHQR 328
             V  E ++  S+N+   RE R   +R
Sbjct: 306 SRVSMETKTGDSSNKPSPRERRNLGRR 332

[Close]

BLAST of Spo01993.1 vs. NCBI nr
Match: gi|720062297|ref|XP_010275456.1| (PREDICTED: E3 ubiquitin-protein ligase RNF25 isoform X1 [Nelumbo nucifera])

HSP 1 Score: 345.1 bits (884), Expect = 1.500e-91
Identity = 176/324 (54.32%), Postives = 224/324 (69.14%), Query Frame = 1


		  
Query: 4   EEEVRMEVEAAEAVYGDDCIILNRFPPHLHLHIKPRTADVDSQQFVEATIELRAGPQYPS 63
           EEEV  EVEA  AVY DDC+++   PPHLH+H +PRTAD  SQQFVEA + +RAGPQYP 
Sbjct: 3   EEEVLFEVEAVRAVYDDDCLVIQNLPPHLHIHTRPRTADDSSQQFVEAILGIRAGPQYPK 62

Query: 64  DTPYVGIIGSKGLDEKRQKHLISGLHDKADELTSCSMLVALCEEAVEILTSMNHPEGDCP 123
           + PY+ II SKGLD KRQ HL++ + +KA  L+SC MLVALCEEAVE L++MNHP+GDCP
Sbjct: 63  ELPYIDIIESKGLDGKRQAHLLTRIQEKAHALSSCPMLVALCEEAVETLSNMNHPDGDCP 122

Query: 124 LCLYPLVPEDKNSEAQPFMKLMSCFHCFHCECIVRWLKWIQKQNETCRGTSSTKSSTVDE 183
           LCLYPLVP+D   +  PFMKLMSCFHCFH ECI+RW KW++ QNET  G SS  S     
Sbjct: 123 LCLYPLVPDDSYDDFLPFMKLMSCFHCFHSECIIRWWKWLEGQNETNAGNSSDASVLPSR 182

Query: 184 ENDLVSDLCKVMGNSTGNCPVCRKVFLAKDIDHVLNLVGSHDADSDVYEKEL-VEKVLQC 243
           +     D+ +VM  + GNCPVCRKVF AKDI+HVLNLVG+H +     E E   +++L+ 
Sbjct: 183 DLRRQQDV-QVMKENLGNCPVCRKVFHAKDIEHVLNLVGTHSSQLVFEESEANDDELLKS 242

Query: 244 DLETSRRQKFETILELQQQYGGLIEPPKDNVLFSRLSLQELVREDTEVTNGEANEQQHNN 303
           D E  RRQKFE IL+LQQ+  GLIEP ++ VL   + L E VR  T  T   A + Q  +
Sbjct: 243 DAENIRRQKFEAILKLQQENSGLIEPKRNEVLLPGMFLPESVRPPTTSTEA-AVDPQPTD 302

Query: 304 QIVREEPESSSSTNRSRETRKQHQ 327
                +PE+ SS + ++ +  +H+
Sbjct: 303 PTCTSKPETISSDSSNKPSTSEHK 324

[Close]

BLAST of Spo01993.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QYG7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_132340 PE=4 SV=1)

HSP 1 Score: 757.7 bits (1955), Expect = 6.800e-216
Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 1


		  
Query: 1   MAEEEEVRMEVEAAEAVYGDDCIILNRFPPHLHLHIKPRTADVDSQQFVEATIELRAGPQ 60
           MAEEEEVRMEVEAAEAVYGDDCIILNRFPPHLHLHIKPRTADVDSQQFVEATIELRAGPQ
Sbjct: 1   MAEEEEVRMEVEAAEAVYGDDCIILNRFPPHLHLHIKPRTADVDSQQFVEATIELRAGPQ 60

Query: 61  YPSDTPYVGIIGSKGLDEKRQKHLISGLHDKADELTSCSMLVALCEEAVEILTSMNHPEG 120
           YPSDTPYVGIIGSKGLDEKRQKHLISGLHDKADELTSCSMLVALCEEAVEILTSMNHPEG
Sbjct: 61  YPSDTPYVGIIGSKGLDEKRQKHLISGLHDKADELTSCSMLVALCEEAVEILTSMNHPEG 120

Query: 121 DCPLCLYPLVPEDKNSEAQPFMKLMSCFHCFHCECIVRWLKWIQKQNETCRGTSSTKSST 180
           DCPLCLYPLVPEDKNSEAQPFMKLMSCFHCFHCECIVRWLKWIQKQNETCRGTSSTKSST
Sbjct: 121 DCPLCLYPLVPEDKNSEAQPFMKLMSCFHCFHCECIVRWLKWIQKQNETCRGTSSTKSST 180

Query: 181 VDEENDLVSDLCKVMGNSTGNCPVCRKVFLAKDIDHVLNLVGSHDADSDVYEKELVEKVL 240
           VDEENDLVSDLCKVMGNSTGNCPVCRKVFLAKDIDHVLNLVGSHDADSDVYEKELVEKVL
Sbjct: 181 VDEENDLVSDLCKVMGNSTGNCPVCRKVFLAKDIDHVLNLVGSHDADSDVYEKELVEKVL 240

Query: 241 QCDLETSRRQKFETILELQQQYGGLIEPPKDNVLFSRLSLQELVREDTEVTNGEANEQQH 300
           QCDLETSRRQKFETILELQQQYGGLIEPPKDNVLFSRLSLQELVREDTEVTNGEANEQQH
Sbjct: 241 QCDLETSRRQKFETILELQQQYGGLIEPPKDNVLFSRLSLQELVREDTEVTNGEANEQQH 300

Query: 301 NNQIVREEPESSSSTNRSRETRKQHQRGHTVVVEPTSNGPSTRPSAGQRRHSGTRRHSKN 360
           NNQIVREEPESSSSTNRSRETRKQHQRGHTVVVEPTSNGPSTRPSAGQRRHSGTRRHSKN
Sbjct: 301 NNQIVREEPESSSSTNRSRETRKQHQRGHTVVVEPTSNGPSTRPSAGQRRHSGTRRHSKN 360

Query: 361 YPRWQPKPTPGKE 374
           YPRWQPKPTPGKE
Sbjct: 361 YPRWQPKPTPGKE 373

[Close]

BLAST of Spo01993.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BG23_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g017670 PE=4 SV=1)

HSP 1 Score: 593.2 bits (1528), Expect = 2.200e-166
Identity = 292/370 (78.92%), Postives = 321/370 (86.76%), Query Frame = 1


		  
Query: 1   MAEEEEVRMEVEAAEAVYGDDCIILNRFPPHLHLHIKPRTADVDSQQFVEATIELRAGPQ 60
           MAEEEEVRMEVEA EAVYGDDCI+LNRFPPHLHLHIKPRTADV  QQFVEATIELRAGPQ
Sbjct: 1   MAEEEEVRMEVEAVEAVYGDDCIVLNRFPPHLHLHIKPRTADVHFQQFVEATIELRAGPQ 60

Query: 61  YPSDTPYVGIIGSKGLDEKRQKHLISGLHDKADELTSCSMLVALCEEAVEILTSMNHPEG 120
           YPSD PYVGIIGSKGLDEKR KHL +GLHD A EL SC MLVALCEEAVE LTSMNHPEG
Sbjct: 61  YPSDPPYVGIIGSKGLDEKRLKHLSNGLHDMAHELASCLMLVALCEEAVERLTSMNHPEG 120

Query: 121 DCPLCLYPLVPEDKNSEAQPFMKLMSCFHCFHCECIVRWLKWIQKQNETCRGTSSTKSST 180
           DCPLCLYPLVPED++SE++PFMKLMSCFHCFHCECIVRWLKWI K+NE C   SS+ SS 
Sbjct: 121 DCPLCLYPLVPEDRHSESEPFMKLMSCFHCFHCECIVRWLKWILKENEACCRISSSLSSI 180

Query: 181 VDEENDLVSDLCKVMGNSTGNCPVCRKVFLAKDIDHVLNLVGSHDADSDVYEKELVEKVL 240
           ++EE +L+SDL ++MG++TGNCPVCRKVFLAKDI+HVLNL GSH+ DSDVY+KELVEKVL
Sbjct: 181 INEEKELISDLRQMMGDNTGNCPVCRKVFLAKDIEHVLNLAGSHEPDSDVYDKELVEKVL 240

Query: 241 QCDLETSRRQKFETILELQQQYGGLIEPPKDNVLFSRLSLQELVREDTEVTNGEANEQQH 300
           QCDLETSRR+KFE ILELQQQ+GGLIEPPK NVLFSRLSLQ+LVRED +  N   +EQQ 
Sbjct: 241 QCDLETSRRRKFEAILELQQQHGGLIEPPKGNVLFSRLSLQDLVREDADAMNDGTSEQQQ 300

Query: 301 NNQIVREEPESSSSTNRSRETRKQHQRGHTVVVEPTSNGPSTRPSAGQRRHSGTRRHSKN 360
            N I REEPESSSS+NR+R  R+QHQRGHTVVVEP S GP TR SAGQ  HSG R+H + 
Sbjct: 301 TNHIGREEPESSSSSNRTRGRRRQHQRGHTVVVEPASRGPQTRSSAGQHGHSGMRKHGRY 360

Query: 361 YPRWQPKPTP 371
           Y R Q KP P
Sbjct: 361 YSRVQAKPRP 370

[Close]

BLAST of Spo01993.1 vs. UniProtKB/TrEMBL
Match: A0A067KAM4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14635 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 3.300e-93
Identity = 184/358 (51.40%), Postives = 241/358 (67.32%), Query Frame = 1


		  
Query: 1   MAEEEEVRMEVEAAEAVYGDDCIILNRFPPHLHLHIKPRTADVDSQQFVEATIELRAGPQ 60
           MA+ EE+ +EVEA +AVYGDDC++++ FPP+LH+H+KPRTADV SQQFVEA I +RAGPQ
Sbjct: 1   MAQVEEILIEVEAVQAVYGDDCVVVDSFPPYLHVHVKPRTADVSSQQFVEAVIGIRAGPQ 60

Query: 61  YPSDTPYVGIIGSKGLDEKRQKHLISGLHDKADELTSCSMLVALCEEAVEILTSMNHPEG 120
           YP   PY+ +I SKGLDE+RQKHL++ + ++A EL+SC MLVALCEEAVE L+ MNHPEG
Sbjct: 61  YPEKPPYIDLIESKGLDEQRQKHLVTSIRNRACELSSCLMLVALCEEAVEELSVMNHPEG 120

Query: 121 DCPLCLYPLVPEDKNSEAQPFMKLMSCFHCFHCECIVRWLKWIQKQNETCRGTSSTKSST 180
           +CPLCL PLV ED+ +EA PFMKLMSCFHCFH ECI+RW  W+QK+ E+   TSST +  
Sbjct: 121 NCPLCLCPLVLEDEQNEALPFMKLMSCFHCFHSECIIRWWNWLQKERESNTNTSSTSALH 180

Query: 181 VDEENDLVSDLCKVMGNSTGNCPVCRKVFLAKDIDHVLNLVGSH--DADSDVYEKELVEK 240
              + +  +D+  +   S GNCPVCRKVF  KD +HVL LVG+H  +  SD  E E  EK
Sbjct: 181 CIRDGENENDMQGINEESMGNCPVCRKVFHTKDFEHVLGLVGAHRTELSSDRTEVE-DEK 240

Query: 241 VLQCDLETSRRQKFETILELQQQYGGLIEPPKDNVLFSRLSLQELVREDTEVTNGEANEQ 300
           +LQ D E  RRQKFE +L+LQ++  GLIEP K+ V+   + L + VR+ T+    E  E+
Sbjct: 241 LLQSDSENIRRQKFEAVLKLQEENSGLIEPKKNLVVLPGMYLPQSVRQPTQALEKENAEE 300

Query: 301 QHNNQIVREEPESSSSTNRSRETRKQHQRGHTVVVEPTSNGPSTRPSAGQRRHSGTRR 357
           Q      R+    S+ TN                    S   S RPS+ + R++G R+
Sbjct: 301 QQ-----RDSTAGSTETN--------------------SGVLSNRPSSSEHRNTGRRK 332

[Close]

BLAST of Spo01993.1 vs. UniProtKB/TrEMBL
Match: B9RCZ1_RICCO (RING finger protein, putative OS=Ricinus communis GN=RCOM_1607720 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 6.100e-92
Identity = 175/327 (53.52%), Postives = 231/327 (70.64%), Query Frame = 1


		  
Query: 3   EEEEVRMEVEAAEAVYGDDCIILNRFPPHLHLHIKPRTADVDSQQFVEATIELRAGPQYP 62
           EEEEV +EVEA +A+YGDDC++++ FPPHLH+HIKPRTADV SQQFVEA I +RAGP+YP
Sbjct: 6   EEEEVLIEVEAVQAMYGDDCVVIDSFPPHLHVHIKPRTADVSSQQFVEAIIGIRAGPKYP 65

Query: 63  SDTPYVGIIGSKGLDEKRQKHLISGLHDKADELTSCSMLVALCEEAVEILTSMNHPEGDC 122
           ++ P + +I SKGLD++RQK LIS + DKA EL+SC MLVALCEEAVE L+ MNHP+G+C
Sbjct: 66  NEPPCINLIESKGLDDQRQKQLISSIQDKACELSSCLMLVALCEEAVEKLSIMNHPDGNC 125

Query: 123 PLCLYPLVPEDKNSEAQPFMKLMSCFHCFHCECIVRWLKWIQKQNETCRGTSSTKSSTVD 182
           PLCLYPLVPED+  E  PFMKLMSCFHCFH ECI+RW  W+QK+ ++   +SS  +    
Sbjct: 126 PLCLYPLVPEDEPDETLPFMKLMSCFHCFHSECIMRWWNWLQKEKDSNASSSSITTVHFV 185

Query: 183 EENDLVSDLCKVMGNSTGNCPVCRKVFLAKDIDHVLNLVGSHDADSDVYEKELVEKVLQC 242
           E     + + ++MG S GNCPVCRKVF  KD +HVL+LVG H  +     KE+ +++LQ 
Sbjct: 186 EGRVNQNAIHELMGESLGNCPVCRKVFHTKDFEHVLSLVGVHCFELSSDRKEVNKELLQS 245

Query: 243 DLETSRRQKFETILELQQQYGGLIEPPKDNVLFSRLSLQELVREDTEVTNGEANEQQHNN 302
           D E+ RRQKFE +L+LQQ+  GLIEP K  V+   + L + V    ++ N E   +   +
Sbjct: 246 DSESIRRQKFEALLKLQQENNGLIEPKKSLVVLPGMYLPQPVTVPAQMVNKETTVETQRD 305

Query: 303 QIVREEPESSSSTNR--SRETRKQHQR 328
             V  E ++  S+N+   RE R   +R
Sbjct: 306 SRVSMETKTGDSSNKPSPRERRNLGRR 332

[Close]

BLAST of Spo01993.1 vs. UniProtKB/TrEMBL
Match: B9GP67_POPTR (RWD domain-containing family protein OS=Populus trichocarpa GN=POPTR_0002s13900g PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 2.300e-91
Identity = 183/332 (55.12%), Postives = 228/332 (68.67%), Query Frame = 1


		  
Query: 4   EEEVRMEVEAAEAVYGDDCIILNRFPPHLHLHIKPRTADVDSQQFVEATIELRAGPQYPS 63
           EEEV +EVEA  A+YGDDC+IL  FPPHLHLHIKPRTAD+ SQQFVEA I +RAGPQYPS
Sbjct: 3   EEEVLIEVEAVLAMYGDDCVILESFPPHLHLHIKPRTADISSQQFVEAVIGIRAGPQYPS 62

Query: 64  DTPYVGIIGSKGLDEKRQKHLISGLHDKADELTSCSMLVALCEEAVEILTSMNHPEGDCP 123
             P++ +I SKGLD +RQK LI+G+ +KA EL+SC MLVALCEEAVE LT MNHP+GDCP
Sbjct: 63  KPPWIDLIESKGLDGERQKQLITGIQEKACELSSCLMLVALCEEAVEKLTVMNHPDGDCP 122

Query: 124 LCLYPLVPEDKNSEAQPFMKLMSCFHCFHCECIVRWLKWIQKQNETCRGTSSTKSSTVDE 183
           LC+ P VPED+  EA PFMKLMSCFHCFHCECIVRW  WIQK+ E+   TS++ S+T+ +
Sbjct: 123 LCMCPFVPEDEQDEALPFMKLMSCFHCFHCECIVRWWNWIQKEKES--NTSTSSSTTLLQ 182

Query: 184 ENDL-----VSDLCKVMGNSTGNCPVCRKVFLAKDIDHVLNLVGSHDADSD-VYEKELVE 243
             ++     +SD+  V+    G+CPVCRKVF  KD +HVL+LVG+  +  D   E +  E
Sbjct: 183 IKEMGNQNGLSDVHGVLEERMGDCPVCRKVFHVKDFEHVLDLVGTQASQLDSEAEIKYEE 242

Query: 244 KVLQCDLETSRRQKFETILELQQQYGGLIEPPKDNVLFSRLSLQELVREDTEVTNGEANE 303
           K+L  D E  RRQKFE IL+LQQ+  GLIEP ++ V+   + L +      +  N E  E
Sbjct: 243 KLLHSDSENFRRQKFEAILKLQQENSGLIEPKREIVVVPGIYLPQRATSAAQTVNKETAE 302

Query: 304 QQHNNQIVREEPESSSSTN--RSRETRKQHQR 328
            Q        E    SS N  R RE+R   +R
Sbjct: 303 HQGTEARPSTETNLGSSLNRPRPRESRNSGRR 332

[Close]

BLAST of Spo01993.1 vs. TAIR (Arabidopsis)
Match: AT3G60300.2 (RWD domain-containing protein)

HSP 1 Score: 305.1 bits (780), Expect = 6.100e-83
Identity = 174/363 (47.93%), Postives = 223/363 (61.43%), Query Frame = 1


		  
Query: 4   EEEVRMEVEAAEAVYGDDCIILNRFPPHLHLHIKPRTADVDSQQ---------------- 63
           EEEV MEVEA EAVY +DC+IL+ +PPHLHLHIKPRTA++ SQQ                
Sbjct: 3   EEEVAMEVEALEAVYSEDCVILDSYPPHLHLHIKPRTAEISSQQVFFSPQFFFFFFGCKN 62

Query: 64  -FVEATIELRAGPQYPSDTPYVGIIGSKGLDEKRQKHLISGLHDKADELTSCSMLVALCE 123
            FVEA +  +AG +YP + P + +I SKGLDE+RQK LI  + +KA +L+S  MLV LCE
Sbjct: 63  SFVEAVVRFQAGSKYPDEPPRISLIESKGLDEQRQKLLIGIVQEKASQLSSSLMLVELCE 122

Query: 124 EAVEILTSMNHPEGDCPLCLYPLVPEDKNSEAQPFMKLMSCFHCFHCECIVRWLKWIQKQ 183
           EAVE LT MNHPEGDCPLCLYPL PED  S+  PFMKLMSCFHCFHCECI+RW  W+  Q
Sbjct: 123 EAVERLTIMNHPEGDCPLCLYPLFPEDGGSKQMPFMKLMSCFHCFHCECIIRWWNWLHAQ 182

Query: 184 NETCRGTSST----KSSTVDEENDLVSDLCKVMGNSTGNCPVCRKVFLAKDIDHVLNLVG 243
            E    +  T    + ST  E N   +D       S GNCPVCRK+F + DI+HVL+LVG
Sbjct: 183 EEADSKSGDTLHMRRGSTAREGNSGSAD------KSLGNCPVCRKIFHSSDIEHVLDLVG 242

Query: 244 SHDA--DSDVYEKELVEKVLQCDLETSRRQKFETILELQQQYGGLIEPPKDNVLFSRLSL 303
           +  +  DS +   +  + +LQ D E  RR++FE+IL+ Q++ GGL++P K+  +   + L
Sbjct: 243 AQSSLQDSSLIPGKDQDPLLQSDSENIRRERFESILKTQEEKGGLVQPKKNISVVPGMYL 302

Query: 304 QELVREDT----EVTNGEANEQ-QHNNQIVREEPESSSSTNRSRETRKQHQRGHTVVVEP 339
                  T    E   GE+ EQ +   +    E  SSSSTNR R   +   RG +    P
Sbjct: 303 PPPAHASTSRNEEEEAGESQEQGEEEPKEAESETNSSSSTNR-RGRGRWRGRGRSRGRGP 358

The following BLAST results are available for this feature:

BLAST of Spo01993.1 vs. NCBI nr
BLAST of Spo01993.1 vs. UniProtKB/TrEMBL
BLAST of Spo01993.1 vs. ExPASy Swiss-Prot
BLAST of Spo01993.1 vs. TAIR (Arabidopsis)

BLAST of Spo01993.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902190992\|gb\|KNA11743.1\|	9.7e-216	100.	hypothetical protein SOVF_1323...	[more]
gi\|731360858\|ref\|XP_010692045.1\|	3.2e-166	78.9	PREDICTED: E3 ubiquitin-protei...	[more]
gi\|802700413\|ref\|XP_012083707.1\|	4.7e-93	51.4	PREDICTED: uncharacterized pro...	[more]
gi\|255541032\|ref\|XP_002511580.1\|	8.8e-92	53.5	PREDICTED: E3 ubiquitin-protei...	[more]
gi\|720062297\|ref\|XP_010275456.1\|	1.5e-91	54.3	PREDICTED: E3 ubiquitin-protei...	[more]

BLAST of Spo01993.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QYG7_SPIOL	6.8e-216	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BG23_BETVU	2.2e-166	78.9	Uncharacterized protein OS=Bet...	[more]
A0A067KAM4_JATCU	3.3e-93	51.4	Uncharacterized protein OS=Jat...	[more]
B9RCZ1_RICCO	6.1e-92	53.5	RING finger protein, putative ...	[more]
B9GP67_POPTR	2.3e-91	55.1	RWD domain-containing family p...	[more]

BLAST of Spo01993.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo01993.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G60300.2	6.1e-83	47.9	RWD domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 122..205 score: 0.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 122..170 score: 8
IPR006575	RWD domain	PFAM	PF05773	RWD	coord: 5..109 score: 1.
IPR006575	RWD domain	SMART	SM00591	RWD2001b	coord: 9..115 score: 5.8
IPR006575	RWD domain	PROFILE	PS50908	RWD	coord: 9..115 score: 16
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 196..217 score: 2.1E-9coord: 121..160 score: 2.
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10		coord: 2..120 score: 1.4
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	unknown	SSF54495	UBC-like	coord: 4..112 score: 1.13
None	No IPR available	PANTHER	PTHR13198	RING FINGER PROTEIN 25	coord: 1..365 score: 3.1
None	No IPR available	PANTHER	PTHR13198:SF4	E3 UBIQUITIN-PROTEIN LIGASE RNF25	coord: 1..365 score: 3.1
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 115..166 score: 1.0

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding