Spo02285.1 (mRNA) | SpinachBase

Overview


Name	Spo02285.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Single-stranded DNA-binding protein
Location	chr5 : 2797782 .. 2807652 (-)
Sequence length	1265

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTTCATCATGTGATCGGGGGTACGTTAGTGCAAGTGTGCAGCCAAGGCTTTTACTTTAAAAAAATTCTCATTTATAAGCCTCAATTAACAAAAGAAACTCCGGAGTAAAAACAAGTTAGATGTACCTTGCAAGATAGAACCGATTGTAGCTTAAAAATATTTATTGTTTTGTGGTATTGTGGTTTATGGAAAAAAATGATATCATTACTTGTCATTCTAAAATATGGATGTACTATTACTTCATTCGATAGTCTTGTACTCCGTATCAGTTGACAGCTCAAAATATCAATATACAAGTATTAGATTCGAATAATACTTCCTCCGTCCCGGAATACTTAAACCGGTTTGACCGGCACAAAGTTTAATACAAAGTAATTGACTTATTATTTGATTAGATGATAGTTGATATTGTATTTTTTAATATAGATAGAGATATGTGTCAACTTTTTAAATGGGGTAAGGGGAAGAGGGGAGGGTGCATGAGACCACAAAGTGACATGTGAAGAGAGTAGTTGATATAATATTAATAAAAATTTACCATTTATAGAAACGGTACAAGTATTCCGGGACGAATTTATAAGAAAAACGGTGAAAGTATTTCGGGACGGAGGGAGTAACGTAGTAACCTATAATTTTATCATTTAATAGTAGATAAGCCATCGTGAGGTTAAAAAAAAGTCATATTCCGTACATAATAACTATTCCATATGCGTTACTGTAGAAATGAATACGATTAGCCATTTCCATCAATTTTGCCCGCGTTCATTGGATAAAAAATTCAATAGGTTTAGTGAAAGGGATAAAAAGAGTGGTGGTTGGTGACTGGAGTGTAAGTCAATTCCCCTAACCTTTTTCGTCACCTACATATTAGATTAGACCAAACTAAAAAATTTAGACTATATCAAACCGAACTATTTATACTTCTATTTATTTGTATTTTTCTATCGTAAAATACCTTTATTTATGTATGATAAAAGTTTTGAAAATTATAACCTTAAAAGTTTTAACATTATATATTTAACGGTTGAGCTATATCATCACATGTTTTTATTTTAAACTAAAATTTGATTAATTGCAAATAATAATGTAGTTCATGAAAGAACCCGTATATATTATTACCCAAACCCACAATAACCGGATTCAAGTATTGCCGCCACCAAGCTTTGGCGCGGAGAGACGCATAAAAACCTTACAAAAGGGAGACGAACCAGGAAAACCCAAATTCAGACAAAAATGGCAACCTTGACAACAATCTTGTTGTCCTGCAAACCTCAAAAACCCCTCAAAACCCTAACTTCCATTGCATGTTCATCTCAATCATCCCCTTCATTCATTTCATTTTCACTCAGGCAAAACATCAAACACCTGGTGTGCAAGACACTGCCGAGATGTTCAATGGACAATCGAAACTCCAACGACTCCATGGGAACATACCCAAGACCCTTAGAGATTCAGTGGAAGAAAGAACTGTGTAATTCTGTTCAGCTTATTGGGATTGTTGGGTTGCCTGTTCAATTTAATCAACTTAGTTCCGGGAAAGTTGTTGCTTCTACTCGTCTTGCTGTCCGAAAATCTCCCACTGATACTAGTTGGTAATTCTGAATTTGATAATTTTTTTGTTGGGTTTTTGTTTCAATTTGCTGAGTAAATGGTTTGGTTTTCTGAATTTCATATTTGACATTGTTGGGTTAATCTTTGAAATGGGGTGCTTTTAGGTTTTTACTCTAATAGTTGCGGTCAAGTAGTTGTAGTTTGGTGTTTTTCCTTATGGGCATTAAGATTATGTTGGATAAGTTGGAATACTGTTATACTTAATTAAGCATGTTGTAGAAAGCGGAATGATTTTGTTGTAATGTTTTTATGTTGGGAAATTGACATGTTATATGAGTAAACAACTAAATTCAAAATGTGTTTGTAATTGGCCTCTAGTTCCTTAGGGTTATGAGATTTAGACATCGCCGTTCGCCCCTTCAATTTATGTACTCCGTAATATTTAGGGTGTAATCTGAAGCAACAAAGATCTTTCTGCTGTTACTTTATCTAGACTCGTAGAATAAAGAGTGTCAATACCATTATGTATGATAGTTTTATGTTTCAAATTAGTGCAAATTTTAGGTTTTTCTTCTAAAGTTTGGAGCTTGAGTTTTTGCTTATGGCAACTTCGGGGTTTAGATGGAAATCAGAGATAAAACATGTGCATATTTTGCAAGAAGTATGTATTTGAACTGACATAGAGGTGTTAGTCACCTAGTGGGTGAAATTGATCTGTGGTTAGAGGGTTTTTTTGGAGGGAAAAGCCATGGTGCTTTATATTATATAGATAAAGGATACATCGTTAGTCCGTTACACAAGGAGAGACCTCACTTGGACAATGATTCTCCCAAACTTGCTCATGACCAAAAGGAGCTAAGCGAGCAAGATGGTGAGTACCATAACTACCATCTCATGGCAGATTGCACCATCTATTGAAGTAAAAAAAAAAACTCATAGAAAGAACATCCTCTAAGATAGAATTCAGGTGGTTGAAGTAAATTGAAGCATTGCAAAGGCGGGAAACCAAGACTTGACTATCGGCTTCCACACGAGTAACCTTGCATTACGCCACCAACGAAGGCCAATAGGCCTTCATCCTTCTTGTGGCAGAAAATATGACATCTCCCTTGTAATCCTAAGCCACCCCACCCAACATCACAAAGGGAAGCGTCACAATTAATTTTGACGACCCAGGCGAAGGAGGCTTCCACAGTCTTGGGCTGCTCGCCGTAGCTCTTGCCTTCAAACTCCATAGATTATTGCACTGCATAGGCATAATCATCAACTAGCCTTCGAGTACGCTCCTAAATGACAGAATGTGGAATTTCTTTGCCGATCAATCTTAGAGATTGTGGACTTAAGTATGTGACTTCTTTAGAGCTTCGAGAGAATTTTCTGATTGTGATAACATGGAAACAATATCCATGTAGCAAGGGAAATAAGGTTTTGATGTTTCAGTTGATTAATCATGTTTAAAGACAATAAGCTCGGCAACTGTAATCTCAGATGAGGGCACTGTAGTCTACTTATGAAGAAACACACATGTTTGGGATGTTAGCATGGACATTCACTGTAGATGTGACTATAAAATCATCAGCGTTAATGCTACAAATCAGACAATGGAAGTATCCTTCAAGACTTCACTTAAGTTTCTCTTGGATTCTTGAGATCATGCCTCCTTTCAAATTCAAGATTACTGATGTAGCTGTGTAGGCATGTGGTGATGGGATTTAGGTGTAATGTCTTTGGGCTGCAAGAGAGGTGCTATGCATGTTAATATGCTAGTCTCTCTGTCCATCCAAAAATCCTCTTACGCTTTGTTTTGGATAACAAAATAGAAGGGAAAGGAAGGGGAGGGGAAAGGCGGAGCTCCATTTTCCCTTCAAATCTCTCCAATTTTGGAGAGATTGGTGTTTATTAAAGAAGGAGAGAAAAATGATCCCCCCCTCTCCCTCCCCTTCCTTCCTCCAACCTCTTATCCAAACAAGGTAGCTTGTTCCTTTCCCTTTTCCTTCCCTCCCTTTCCTCTTATCCAAACATAGTGTTGAAGTCGTAAAAAGTGTTATCAACTGAGAGTAAAGTGGGTACTTTGGGGTCCTGAGTGAGGTCAGAGCAAAATATTATGTTTCAGGTATTTAGAGGAACACACATGCCAGAGGGAGATTTCTGGGATTTCCTTGCGCACATTAATGAGTGCACTTGGAAAAAGGATAAATTTATAAGTGTGGCTAAATTCTCCACCTAATAGCTAACGCTTTTGGGTTGGCATAATGGCATGGAAATTGGCTCACTCATAGTCCATCTCTGCCAAATCCAATCAAATTATGAAGGATACTTTCAGTTGGTATTGTAAAACTAAGCATGTTAGTGTTTACATAGCCACAGACAAAATATTTCCCATTTCCGTTCTCTGATTCCTCATATTCTCTTAGGGAACTATGTGTTTATGATGATTACCTCTGCCTTTATTTTAAATCTTTTCATAAATTTTCCGAGGTTGGTCGACCCCAAATCATTTTGGCCTTTTGGGACTAAGGCTTTGTTGTAATTTTTTTTTCTGGGGTTCAGCTAGAAGCCTAGAACACTTATCTGTCAAGCAACTTTGCTACCAGAAATATTATGGTTTTTAGTAGATACTAGGTATTAGATAGACGTCAACCAGTTTTTTCTGTCGGGGTCCAGAGTAGCCTGCTGTTGGTTGCGTTTTAATGGCACTTCTTCTACCTCTTGCCTTCTACAAAACCTTAGGTTAGAGATTATGATGTGGCCTGTGTGACTTGCTGGTAAAAGTGAATGTTCTGCCTTACAGAATCGGGGTCTACAGCCTGCATGAGTCAAGACTCTGCTGACAAAATCCAATCTCCTTGCTAATTACTACTCCATGCTAACTTACCATTTTGTAAAATGCAAGCACTTTTTTTTGTGGTAGAAACATTAGTCTCTTTATAAGCGGATGAAGGCAGTCAGTGGTACTTTTTGTTGTAGGATCAATTTGACATTTTGGGAAGAACTGGCACATGTAGCTCACCAGCATTTAGAGAAAGGTCAGCAGATATATGTCTCTGGCCGTTTGGTGTCAGATACTGTTGAAAGTGAAGATGGGAAACAGCAGACTTACTACAAGGTAATTTTGACTTTAGTTCTTGCAGCCTGCTTCTTAGCTTTGAATAAGGTTTTCTAATACACACTCACAATTCATGATTCCCAGGTGGTTGTTCAGCAACTGAACTTTATTGAAAGGAACTCTTCTTCTCCAGTGCCCTTATATGATGGCAGCTCTGACTCGACAGCAACAGGTGATTCATATCTTTATATCAGCTCGGTTGTATAAGGATGATTTTTGGATTTTTCTCTTTTTTTTGGAACTTCCGGCTGACCTTACATGCTTTCTTTGACTGACAGTTGCGAAGTTTGACAACACTGCTGCACCTAGTAAGCTTTCCACTCAAGAGTTGTGGCAAGCGTTTTTTGCTAATCCAACGGAATGGTGGGACAACCGGAAGAACAAGGTAGTCGATTGAGTTGTGATGTCCTCCACTAATTTTAGGGTATTCTAATAGTTTTTGTTGATGGGCTCAAATATGACGAGGACTCACCTAAGAATAAATCTAAGATCAACTGTCAGAACTAATTAAAATTTCGTAAATTTATGTTATGAGCGAGCTCACATAAATCCAAATTGTGAAAGAAAAAACCCCACTCCAGTTCTACACCCCCTCTTCCAGCAGCATGCCAGTCCCACCACTAATGAGTAATGATCACGTAAGCCATGGCAGCTTCCCAGAGAGAAACAATTTGCGCGTTGTTGCTGCTGTATTTTTGTCTTTTCTAATATACTCACGATAAACACCACGTCAGAAATCTCAGAATCATCTGCTTACCGTTCTTTTCTTTGAAAAAGTGTTATTGCCCATTATGACCACATTTCTTGTTAGCATGAACACATATAATATCGACTAAAGTAGATAAAAATGAAAAGTCACTCACCTCGCAATAGTCATAAGTTTGAAGATAAGTTCATATACTACATGAATACTTTTTGTGAAAGGACAACAAAGAAACTCAAGTATATGAAATTAAATGAGAAATTTAATTCTTAGTGAAGTGGGGTATGTGTTTGTAGCATTTGAAATGGGTTTAAACTAGGTCAATTGTAACTTTGTGAGTGCAATATCATATCTCTACCGGTCATGGGTAGACCTCGGTGGCCTTACAAACTTTCCCCCCATTTTATCAAGAAATTCCAGTGGTAGTCTTGATGCTTTATTTATGCACTTATAGACTTCATGTAGATACCTGTTCGATTTCCAGTTAAGTTTTACAAGCAATGAGTTAGAGCCTTCAAATTCCTGTAATGATATTTCCGATGGATTTCTCTGAAACTAATGTCATGGAGTGTTCTAAATTCCAGATGGTAATTGCACGATCTATGTAATGTGTGAAGCCTTTGGGAAATATGTCATTCTTAAGAAAGATCTTGTGAACATGAGTTCAATATCACCTATGGTCAAAATGGCAACTAAAGGATCTTGTAACTCCTCTTCTATTTCTTCTTGAGCAGCAATTATTCCCAAATATAATATTAGAAAGGCCTCGTGAACATGAATTCCATATCATGTATGTTTGAACTACCTTGCCTTTGCTTTCTTTTGGGCATTTGATGGTCTTATAGGGACATGAGCTATAAGAGCTATCAGGGATGAGGGATCTTAGAGAATCTTTTTTGATTGCTAAATGAAATCTTGCATTTCAGTACAGAGAGATCTCATAGAGTCATTGGTGTGCATTGCGAGCTTTAGGTTGAGATTTATCATTAACATTTTTGGTAGTGGTGTGTAGGTTATTGCTATATTTGGCAGTTTCAAATGTCTTCTTCCCATTAAGGACCGAAGCCTGAAGGAATTTTTTCGGGTAGTGTCATCGACTAAGTGTATTAAGGGACCACATGAGTTTCCTTCTAAAATATCCGCCAACCTATCCGCCAACACATGAAGGACCACTTGAATCGTAGCCTTCTAAGTTTTGCTCTGTCTTAGACGATTTTATGGCTGGTTATATTTGTTGTCTCAGATATTGTAACGAACCCTATATTCTCTCCTAAATTCTTTTGGGAGAATCCATCTGGCTTCGAAAGAGTCACACTAATCATTGCATACATTTGGATACCTCAAGTACAATAGGAGTTTTGAGGTCTTATTGGCATGAGGTGCAATGTTCTAAATAGGCTTTGCTAAGGATGTTTTTAGTTTGGTTAAGGGGCTTAAAAATGTCTTTCCTTCAATTTTTGCCAAGAGATTCCAATAGCAACGTGAAGGGCCTCACGGGTATGGGCTATGCCTTCAATGGGGCTATGTCAGATGTGGTATACCTTTGTCCTGATAGACATCAGGAGCTTTCGGCAATCTGAAAGCTTGTTATTAATATTTCATTGGCATTTTGCAAGATCTCATAGGAAGCACTGGGATTTGGTTGCATACATTTGACTCCCTTATCTTGCTTCAAATCGGAGTTTCTGTAGAAGCATTCGGATTATGATATTTTTCTTACAAGACTTCGTAAAGGTCTCATAGAGTAAATAACCTTGAAAGCAGGTTTTTCCTTGGAAACTTCTCGCATGATGTCATCTATAGTAGTAACTAGTAAGGGAACTAGGCCAGCCTTAGGAACCTTTGCCCAGCTCCACCTGGGAAATGTCTTCAACCTTTAGGGTTTTATGAGCATTGGGTTATAGTGTTTGAAATAGGTGTTCAGTTGAGGCATGGGGCGAATGAAGGGCCCAGAAAAACCTGTCCTTTAATATCTACCGAGAAAGGCTAATGAGGTATGAGTTATAACCTTTGAAACAGGAAGTTTGTGGTGCCATGTAATAGTGTAAGACTGTAGTTTTTGTCGTCATCGCTAGTAGAGCTATCAGCAACTCAAGGGCGTTTACAAAAGACTTGTCCTTTAATTTCTACGAGAAGGGTGATAAGGTATGAGTTATTTCCCTTGTATTGCATGGGCCACTTTCAAGTAGTGTAAGACTGTAATTTATTATCTTGATGGCAAGAAAAGCCATCAGAAACCTAAGGCGTTTTTAAAAGCTTATGGAGACTTGTGAGTTGTAATCAAACTTTCAGTTTGTAGGAGTGGAAGACTATACTTTCAAAGTGGTAGACAAGGGCACTTAGTTTGTAGGAGTATAAGACTGTACTTTGAAAGTGGTAGACAAAAGGCAATTAGTTTGTAGGAGTATAAGATTATACTTTAAAAGTGGTAGACAAGGGAAATTTTGAGACATTGCATTAAGACTAGCTTTTGAGATGGGTTCAATGGAGTATGTTTAAGGCCATCTATGATTCCCCTGGCCATTGGCCCATTAGGGGACCTCTCACTTAAATCATGATGGTATTAAGACATGTGTTATAACTTTTGAAATAAACTTCATAGAAAAGATAGTTTTACTCATCTATCGTTGTCATGTACGTAGTACATCTTTAGACCTGAGGCTTTTACACCAATCTTTTTGGGATTTTCTCCAACATTCAGAAGGGATTACAGGTGTGAATTATAGCCTTTGAAATAGGATGCACCATGAGGAATTCAAATGCTTAAGGCACTCCCAAGTTCAGTTGTAACTTCTCATTGGGTGTCGACTGGGTTTTGTGGCATGCTGATTCATACACTTCAATACTTCATGATGCAATTCCTTGCAGGAATATTTGGTGCCGGTATCATCTATTTTCTTGAGTGCCATATGAGGGGACTTTTCGGAGGCATATGTTCTTTCCCCAGAAATCATATTAAGAAAATGCACAGCCACATAGCAAGGTCTCGGGGGTGCGAGTTATGTAACCATCAAAGCTGGTTTTACTGAAGCTAATTTCATGTTCATTGTTATTATGGTCTTAGCGACGAAAGCCTTCCCTTTAATATTGGCCGTGAAATATATAAATATAAAAAATAATGGTACTTCAGTTTGAGTTTGTGTTTGTAAAAGTAGCTTGAATTTATTTTTACGCAATCCTAGTTATGAGGAGATTATGCACACTCTCCACTTCCACTCTCCACAAAAATCTGACAGGTGGGCTGGGAAAAGGGAAAAAAATAATCCCCTCCTCATTGTCACTCTCTTTCCTCCACCCGACGAGTTTCCTCAGCACTGCTTCTTGACAGTTTCCCAAAAAAGGCACCATGGGTGAACCGTTGAGAAAGAGAGGGGAAAATGAGTTTGGTTGTGGAAGGATTTCGTTGGACATGGCCGGAAAAAGGAGAACATCCTGTTGGAAAAGTGAAAGGTGGGAGGAGAGAGACATTTAGGGGACGGAGGAGCTTTTTGATATATATTTATATTTGCCACTTGTTAGGTTTTTGTCGTGAGCGTATGTGGAGAGTGAATTTAGCATTTCTTTCTTATCATTCTGTAGAGATCTATTTTCAGCGGTTACAAACTTGTGTACTAGTATGTAAATATTTTATGACAACGAGAGGGAAAAAGAACTGGAACATCTTACATTTGATATTCGTTACTACATTTTTAACAGGATCACGCTTAAAGTAGTTTGTTTCCAAGTTAGTTTGACATAAACTGAGATACTTCAGTTAGTACATCATTTAGATGAATACATGTAGCAATAATTTTTTCATTGTGCAATTTTGTTTCAGTTTACTTTTAAAGGTTTCTTTGTAGGTCTTTTGCATTTTGCATTGGATAGTTTTAGCTAGGTGAAATTTAGGCAAAGTCATTTGGATTTCCCTAGATCCTGCCAATGAGGGATTCTTGCTGGCTTGTTGGTATTGGTGTGCCGTTGACACTCTTTGGGTTTATTCAATTTCTCACTCGTTGTTGCTGATTTGTTCTGCAGAAAACTCCCAAATATCCCGATTTCAAGCACAAAGATACCGGGGAAGCTCTGTGGGTGGATGCCAGGTATAATCCACCATGGGTGAAATCTCAATTGGAAGTATTGGATTCGAGAATGCAATCTGTTCAAAAGCAGGAAGACACAAGTTTTTCCAACTATTTCAACGGAGGTTACTAGATGCTATGTTTGGCGACTTCTATGGTGCTGTTGGATCATTTCTGTATAATGTGCTAATTTATTGTCCATTTCTTTCCTTTTTTCTGGGTGAATTATGGATTTTGAACTCAGCACCTTTTGTTGTACAGGATTTAACTATGGTATTAGGTTTGGTTTTTCATAGCCTTTAAGTGTAATGTACATTTTCTCCAGAAACTATCCCTTTTTAGGTGAACTTATTATCACTGATCTGTGCAAAACAATCTTGTCGAGTAATTGTTGTTGTGATGAATTATGTAGCACTATTTACTTTTGGATGAACCAAAATATCA

mRNA sequence

ATGAAGTTTCATCATGTGATCGGGGAGACGCATAAAAACCTTACAAAAGGGAGACGAACCAGGAAAACCCAAATTCAGACAAAAATGGCAACCTTGACAACAATCTTGTTGTCCTGCAAACCTCAAAAACCCCTCAAAACCCTAACTTCCATTGCATGTTCATCTCAATCATCCCCTTCATTCATTTCATTTTCACTCAGGCAAAACATCAAACACCTGGTGTGCAAGACACTGCCGAGATGTTCAATGGACAATCGAAACTCCAACGACTCCATGGGAACATACCCAAGACCCTTAGAGATTCAGTGGAAGAAAGAACTGTGTAATTCTGTTCAGCTTATTGGGATTGTTGGGTTGCCTGTTCAATTTAATCAACTTAGTTCCGGGAAAGTTGTTGCTTCTACTCGTCTTGCTGTCCGAAAATCTCCCACTGATACTAGTTGGATCAATTTGACATTTTGGGAAGAACTGGCACATGTAGCTCACCAGCATTTAGAGAAAGGTCAGCAGATATATGTCTCTGGCCGTTTGGTGTCAGATACTGTTGAAAGTGAAGATGGGAAACAGCAGACTTACTACAAGGTGGTTGTTCAGCAACTGAACTTTATTGAAAGGAACTCTTCTTCTCCAGTGCCCTTATATGATGGCAGCTCTGACTCGACAGCAACAGTTGCGAAGTTTGACAACACTGCTGCACCTAGTAAGCTTTCCACTCAAGAGTTGTGGCAAGCGTTTTTTGCTAATCCAACGGAATGGTGGGACAACCGGAAGAACAAGAAAACTCCCAAATATCCCGATTTCAAGCACAAAGATACCGGGGAAGCTCTGTGGGTGGATGCCAGGTATAATCCACCATGGGTGAAATCTCAATTGGAAGTATTGGATTCGAGAATGCAATCTGTTCAAAAGCAGGAAGACACAAGTTTTTCCAACTATTTCAACGGAGGTTACTAGATGCTATGTTTGGCGACTTCTATGGTGCTGTTGGATCATTTCTGTATAATGTGCTAATTTATTGTCCATTTCTTTCCTTTTTTCTGGGTGAATTATGGATTTTGAACTCAGCACCTTTTGTTGTACAGGATTTAACTATGGTATTAGGTTTGGTTTTTCATAGCCTTTAAGTGTAATGTACATTTTCTCCAGAAACTATCCCTTTTTAGGTGAACTTATTATCACTGATCTGTGCAAAACAATCTTGTCGAGTAATTGTTGTTGTGATGAATTATGTAGCACTATTTACTTTTGGATGAACCAAAATATCA

Coding sequence (CDS)

ATGAAGTTTCATCATGTGATCGGGGAGACGCATAAAAACCTTACAAAAGGGAGACGAACCAGGAAAACCCAAATTCAGACAAAAATGGCAACCTTGACAACAATCTTGTTGTCCTGCAAACCTCAAAAACCCCTCAAAACCCTAACTTCCATTGCATGTTCATCTCAATCATCCCCTTCATTCATTTCATTTTCACTCAGGCAAAACATCAAACACCTGGTGTGCAAGACACTGCCGAGATGTTCAATGGACAATCGAAACTCCAACGACTCCATGGGAACATACCCAAGACCCTTAGAGATTCAGTGGAAGAAAGAACTGTGTAATTCTGTTCAGCTTATTGGGATTGTTGGGTTGCCTGTTCAATTTAATCAACTTAGTTCCGGGAAAGTTGTTGCTTCTACTCGTCTTGCTGTCCGAAAATCTCCCACTGATACTAGTTGGATCAATTTGACATTTTGGGAAGAACTGGCACATGTAGCTCACCAGCATTTAGAGAAAGGTCAGCAGATATATGTCTCTGGCCGTTTGGTGTCAGATACTGTTGAAAGTGAAGATGGGAAACAGCAGACTTACTACAAGGTGGTTGTTCAGCAACTGAACTTTATTGAAAGGAACTCTTCTTCTCCAGTGCCCTTATATGATGGCAGCTCTGACTCGACAGCAACAGTTGCGAAGTTTGACAACACTGCTGCACCTAGTAAGCTTTCCACTCAAGAGTTGTGGCAAGCGTTTTTTGCTAATCCAACGGAATGGTGGGACAACCGGAAGAACAAGAAAACTCCCAAATATCCCGATTTCAAGCACAAAGATACCGGGGAAGCTCTGTGGGTGGATGCCAGGTATAATCCACCATGGGTGAAATCTCAATTGGAAGTATTGGATTCGAGAATGCAATCTGTTCAAAAGCAGGAAGACACAAGTTTTTCCAACTATTTCAACGGAGGTTACTAG

Protein sequence

MKFHHVIGETHKNLTKGRRTRKTQIQTKMATLTTILLSCKPQKPLKTLTSIACSSQSSPSFISFSLRQNIKHLVCKTLPRCSMDNRNSNDSMGTYPRPLEIQWKKELCNSVQLIGIVGLPVQFNQLSSGKVVASTRLAVRKSPTDTSWINLTFWEELAHVAHQHLEKGQQIYVSGRLVSDTVESEDGKQQTYYKVVVQQLNFIERNSSSPVPLYDGSSDSTATVAKFDNTAAPSKLSTQELWQAFFANPTEWWDNRKNKKTPKYPDFKHKDTGEALWVDARYNPPWVKSQLEVLDSRMQSVQKQEDTSFSNYFNGGY

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo02285	Spo02285	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo02285.1	Spo02285.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo02285.1.CDS.6	Spo02285.1.CDS.6	CDS
Spo02285.1.CDS.5	Spo02285.1.CDS.5	CDS
Spo02285.1.CDS.4	Spo02285.1.CDS.4	CDS
Spo02285.1.CDS.3	Spo02285.1.CDS.3	CDS
Spo02285.1.CDS.2	Spo02285.1.CDS.2	CDS
Spo02285.1.CDS.1	Spo02285.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo02285.1.utr3p.1	Spo02285.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo02285.1.exon.6	Spo02285.1.exon.6	exon
Spo02285.1.exon.5	Spo02285.1.exon.5	exon
Spo02285.1.exon.4	Spo02285.1.exon.4	exon
Spo02285.1.exon.3	Spo02285.1.exon.3	exon
Spo02285.1.exon.2	Spo02285.1.exon.2	exon
Spo02285.1.exon.1	Spo02285.1.exon.1	exon

Homology

[Close]

BLAST of Spo02285.1 vs. NCBI nr
Match: gi|902188412|gb|KNA11146.1| (hypothetical protein SOVF_138020 [Spinacia oleracea])

HSP 1 Score: 581.6 bits (1498), Expect = 8.100e-163
Identity = 287/289 (99.31%), Postives = 288/289 (99.65%), Query Frame = 1

		  
Query: 29  MATLTTILLSCKPQKPLKTLTSIACSSQSSPSFISFSLRQNIKHLVCKTLPRCSMDNRNS 88
           MATLTTILLSCKPQKPLKTLTSIACSSQSSPSFISFSLRQNIKHLVCKTLPRCSMDNR+S
Sbjct: 1   MATLTTILLSCKPQKPLKTLTSIACSSQSSPSFISFSLRQNIKHLVCKTLPRCSMDNRDS 60

Query: 89  NDSMGTYPRPLEIQWKKELCNSVQLIGIVGLPVQFNQLSSGKVVASTRLAVRKSPTDTSW 148
            DSMGTYPRPLEIQWKKELCNSVQLIGIVGLPVQFNQLSSGKVVASTRLAVRKSPTDTSW
Sbjct: 61  YDSMGTYPRPLEIQWKKELCNSVQLIGIVGLPVQFNQLSSGKVVASTRLAVRKSPTDTSW 120

Query: 149 INLTFWEELAHVAHQHLEKGQQIYVSGRLVSDTVESEDGKQQTYYKVVVQQLNFIERNSS 208
           INLTFWEELAHVAHQHLEKGQQIYVSGRLVSDTVESEDGKQQTYYKVVVQQLNFIERNSS
Sbjct: 121 INLTFWEELAHVAHQHLEKGQQIYVSGRLVSDTVESEDGKQQTYYKVVVQQLNFIERNSS 180

Query: 209 SPVPLYDGSSDSTATVAKFDNTAAPSKLSTQELWQAFFANPTEWWDNRKNKKTPKYPDFK 268
           SPVPLYDGSSDSTATVAKFDNTAAPSKLSTQELWQAFFANPTEWWDNRKNKKTPKYPDFK
Sbjct: 181 SPVPLYDGSSDSTATVAKFDNTAAPSKLSTQELWQAFFANPTEWWDNRKNKKTPKYPDFK 240

Query: 269 HKDTGEALWVDARYNPPWVKSQLEVLDSRMQSVQKQEDTSFSNYFNGGY 318
           HKDTGEALWVDARYNPPWVKSQLEVLDSRMQSVQKQEDTSFSNYFNGGY
Sbjct: 241 HKDTGEALWVDARYNPPWVKSQLEVLDSRMQSVQKQEDTSFSNYFNGGY 289

[Close]

BLAST of Spo02285.1 vs. NCBI nr
Match: gi|731336267|ref|XP_010679163.1| (PREDICTED: protein OSB2, chloroplastic-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 449.1 bits (1154), Expect = 6.300e-123
Identity = 230/290 (79.31%), Postives = 250/290 (86.21%), Query Frame = 1

		  
Query: 29  MATLTTILLSCKPQKPLKTLTSIACSSQSSPSFISFSLRQNIKHLVCKTLPRCSMDNRNS 88
           MATLT  L  CKPQ   KTL  I+CS  SS S  SFSLRQNIKHLVCKT  RCS+ N++S
Sbjct: 1   MATLTKTLY-CKPQFVRKTLIPISCSFSSS-SIPSFSLRQNIKHLVCKTESRCSLSNQDS 60

Query: 89  NDSMGTYPRPLEIQWKKELCNSVQLIGIVGLPVQFNQLSSGKVVASTRLAVRKSPTDTSW 148
            DSMGTY RP EIQWKKELCNSVQLIGIV LPVQ   LSSGKVVASTRLAVRKS T+TSW
Sbjct: 61  YDSMGTYTRPSEIQWKKELCNSVQLIGIVALPVQLTHLSSGKVVASTRLAVRKSATNTSW 120

Query: 149 INLTFWEELAHVAHQHLEKGQQIYVSGRLVSDTVESEDGKQQTYYKVVVQQLNFIERNSS 208
           INLT W+ELAHVAHQHLEKGQQI+VSGRLVSDTV++EDGKQQTYYKVVVQQLNF+ERNSS
Sbjct: 121 INLTLWDELAHVAHQHLEKGQQIFVSGRLVSDTVDNEDGKQQTYYKVVVQQLNFVERNSS 180

Query: 209 SPVPLYDGSSDSTATVAKFDNTAAPSKLSTQELWQAFFANPTEWWDNRKNKKTPKYPDFK 268
           SPV LYD +SDST+TV KF    A +KLSTQELWQA+FANPT+WWDNRKNKK  K PDFK
Sbjct: 181 SPVALYDDNSDSTSTVGKFVKAPAINKLSTQELWQAYFANPTDWWDNRKNKKNLKSPDFK 240

Query: 269 HKDTGEALWVDARYNPPWVKSQLEVLDSR-MQSVQKQEDTSFSNYFNGGY 318
           HKDTGEALWV++RYNPPWVKSQLE+LDSR MQS+QKQE  SFS+YFNGGY
Sbjct: 241 HKDTGEALWVESRYNPPWVKSQLEILDSRMMQSLQKQEGPSFSDYFNGGY 288

[Close]

BLAST of Spo02285.1 vs. NCBI nr
Match: gi|747071463|ref|XP_011082602.1| (PREDICTED: protein OSB4, chloroplastic-like [Sesamum indicum])

HSP 1 Score: 328.9 bits (842), Expect = 9.500e-87
Identity = 169/274 (61.68%), Postives = 198/274 (72.26%), Query Frame = 1

		  
Query: 60  SFISFSLR-QNIKHLVCKTLPRCSMDNRNSNDSMGT------------------YPRPLE 119
           SF   SL+ + ++ L      +CS D   S  S                     YPRP+E
Sbjct: 24  SFPQISLKPEALRRLASTARIKCSFDYNGSASSTAAANSNGLYEYERYAPAGPQYPRPVE 83

Query: 120 IQWKKELCNSVQLIGIVGLPVQFNQLSSGKVVASTRLAVRKSPTDTSWINLTFWEELAHV 179
           IQWKKELCNSVQLIG++G PVQ   L SGKV+A +RLAV+KS TDT WINLTFW+E+AHV
Sbjct: 84  IQWKKELCNSVQLIGVIGAPVQIKHLPSGKVLAWSRLAVKKSLTDTLWINLTFWDEMAHV 143

Query: 180 AHQHLEKGQQIYVSGRLVSDTVESEDGKQQTYYKVVVQQLNFIERNSSSPVPLYDGSSDS 239
           A QH+EKGQQIYVSGRLVSDTVE+++GKQQTYYKVVVQQLNFIER+ SS VPLY+G S S
Sbjct: 144 AFQHVEKGQQIYVSGRLVSDTVENDEGKQQTYYKVVVQQLNFIERSLSS-VPLYNGESSS 203

Query: 240 TATVAKFDNTAAPSKLSTQELWQAFFANPTEWWDNRKNKKTPKYPDFKHKDTGEALWVDA 299
                K +  A  S  ST+ELWQAFFANP EWWDNRKNK++P YPDFKHKDTGEALWV+ 
Sbjct: 204 APPGRKQNYYAPNSTGSTEELWQAFFANPMEWWDNRKNKRSPNYPDFKHKDTGEALWVEG 263

Query: 300 RYNPPWVKSQLEVLDSRMQSVQKQEDTSFSNYFN 315
           RYNPPWVKSQL VLDSRM+S  +Q   +  N+ +
Sbjct: 264 RYNPPWVKSQLSVLDSRMESFHEQNSNTRVNFMS 296

[Close]

BLAST of Spo02285.1 vs. NCBI nr
Match: gi|970053759|ref|XP_015088508.1| (PREDICTED: protein OSB2, chloroplastic-like [Solanum pennellii])

HSP 1 Score: 323.2 bits (827), Expect = 5.200e-85
Identity = 159/247 (64.37%), Postives = 191/247 (77.33%), Query Frame = 1

		  
Query: 80  RCSMDNRNSNDSMGT------------YPRPLEIQWKKELCNSVQLIGIVGLPVQFNQLS 139
           RCS +  +S +  G+            YPRP E+QWKKELCNSVQLIG V +PVQ   L+
Sbjct: 48  RCSFEYNSSGNGNGSVYEYERYAGVSQYPRPSEVQWKKELCNSVQLIGNVAVPVQIKHLN 107

Query: 140 SGKVVASTRLAVRKSPTDTSWINLTFWEELAHVAHQHLEKGQQIYVSGRLVSDTVESEDG 199
           SGKVVA TRLAVRKS  DT+WINLTFW++LA+VA+QH+EKGQQIYVSGRL+SDTVE +DG
Sbjct: 108 SGKVVAWTRLAVRKSQNDTTWINLTFWDDLANVANQHVEKGQQIYVSGRLISDTVEGDDG 167

Query: 200 KQQTYYKVVVQQLNFIERNSSSPVPLYDGSSDSTATVAKFDNTAAPSKLSTQELWQAFFA 259
           K+QTYYKVVVQQLNFIE+N S P+  Y+G S+S A   K +N AA +  ST+ELWQAFFA
Sbjct: 168 KEQTYYKVVVQQLNFIEKN-SPPIASYNGDSNSMAPRKKQNNFAANTTGSTEELWQAFFA 227

Query: 260 NPTEWWDNRKNKKTPKYPDFKHKDTGEALWVDARYNPPWVKSQLEVLDSRMQSVQKQEDT 315
           NP EWWDNRKNK++P YPDFKHKDTGEALWV+ RYNP WVKSQL VLDS+M+S   Q  +
Sbjct: 228 NPLEWWDNRKNKRSPNYPDFKHKDTGEALWVEGRYNPTWVKSQLAVLDSKMESFHDQNGS 287

[Close]

BLAST of Spo02285.1 vs. NCBI nr
Match: gi|731394705|ref|XP_010651930.1| (PREDICTED: protein OSB2, chloroplastic [Vitis vinifera])

HSP 1 Score: 323.2 bits (827), Expect = 5.200e-85
Identity = 170/282 (60.28%), Postives = 204/282 (72.34%), Query Frame = 1

		  
Query: 34  TILLSCKPQKPLKTLTSIACSSQSSPSFISFSLRQNIKHLVCKTLPRCSMDNRNSNDSMG 93
           T +L+C P+ PL    ++  S   +P F S  L Q    L C  +  C+ +N + N ++ 
Sbjct: 9   TSILNCVPKTPLFKTQTLFLSPCPNPFFSS--LPQPKTQLRCSII--CNYNNDHHNQAV- 68

Query: 94  TYPRPLEIQWKKELCNSVQLIGIVGLPVQFNQLSSGKVVASTRLAVRKSPTDTSWINLTF 153
           +YPRP E+ WKKELCNSV LIGIVG PV+   LSSGKV+A TRLAVRKS +DT+WINLTF
Sbjct: 69  SYPRPSEVPWKKELCNSVSLIGIVGAPVEIKHLSSGKVLAWTRLAVRKSASDTTWINLTF 128

Query: 154 WEELAHVAHQHLEKGQQIYVSGRLVSDTVESEDGKQQTYYKVVVQQLNFIERNSSSPVPL 213
           W+ELAHVA QH+EKGQQIYVSGRLVSDTVE+++GKQQTYYKVVVQQLNF+ER+ SS    
Sbjct: 129 WDELAHVASQHVEKGQQIYVSGRLVSDTVENDEGKQQTYYKVVVQQLNFVERSFSSA--- 188

Query: 214 YDGSSDSTATVAKFDNTAAPSKLSTQELWQAFFANPTEWWDNRKNKKTPKYPDFKHKDTG 273
               S+S A   K  + A  S  S +ELWQAFFANP +WWDNRK KK PKYPDFKHKDTG
Sbjct: 189 --DESNSLAAGRKLGSPATNSTGSIEELWQAFFANPVDWWDNRKTKKNPKYPDFKHKDTG 248

Query: 274 EALWVDARYNPPWVKSQLEVLDSRMQSVQKQEDTSFSNYFNG 316
           EALWV+ RYNP WVKSQL +LDSRM+S + Q+     N   G
Sbjct: 249 EALWVEGRYNPSWVKSQLAILDSRMESFRDQDARMHVNLMAG 280

[Close]

BLAST of Spo02285.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QXC0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_138020 PE=4 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 5.700e-163
Identity = 287/289 (99.31%), Postives = 288/289 (99.65%), Query Frame = 1

		  
Query: 29  MATLTTILLSCKPQKPLKTLTSIACSSQSSPSFISFSLRQNIKHLVCKTLPRCSMDNRNS 88
           MATLTTILLSCKPQKPLKTLTSIACSSQSSPSFISFSLRQNIKHLVCKTLPRCSMDNR+S
Sbjct: 1   MATLTTILLSCKPQKPLKTLTSIACSSQSSPSFISFSLRQNIKHLVCKTLPRCSMDNRDS 60

Query: 89  NDSMGTYPRPLEIQWKKELCNSVQLIGIVGLPVQFNQLSSGKVVASTRLAVRKSPTDTSW 148
            DSMGTYPRPLEIQWKKELCNSVQLIGIVGLPVQFNQLSSGKVVASTRLAVRKSPTDTSW
Sbjct: 61  YDSMGTYPRPLEIQWKKELCNSVQLIGIVGLPVQFNQLSSGKVVASTRLAVRKSPTDTSW 120

Query: 149 INLTFWEELAHVAHQHLEKGQQIYVSGRLVSDTVESEDGKQQTYYKVVVQQLNFIERNSS 208
           INLTFWEELAHVAHQHLEKGQQIYVSGRLVSDTVESEDGKQQTYYKVVVQQLNFIERNSS
Sbjct: 121 INLTFWEELAHVAHQHLEKGQQIYVSGRLVSDTVESEDGKQQTYYKVVVQQLNFIERNSS 180

Query: 209 SPVPLYDGSSDSTATVAKFDNTAAPSKLSTQELWQAFFANPTEWWDNRKNKKTPKYPDFK 268
           SPVPLYDGSSDSTATVAKFDNTAAPSKLSTQELWQAFFANPTEWWDNRKNKKTPKYPDFK
Sbjct: 181 SPVPLYDGSSDSTATVAKFDNTAAPSKLSTQELWQAFFANPTEWWDNRKNKKTPKYPDFK 240

Query: 269 HKDTGEALWVDARYNPPWVKSQLEVLDSRMQSVQKQEDTSFSNYFNGGY 318
           HKDTGEALWVDARYNPPWVKSQLEVLDSRMQSVQKQEDTSFSNYFNGGY
Sbjct: 241 HKDTGEALWVDARYNPPWVKSQLEVLDSRMQSVQKQEDTSFSNYFNGGY 289

[Close]

BLAST of Spo02285.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CE35_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g120290 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 4.400e-123
Identity = 230/290 (79.31%), Postives = 250/290 (86.21%), Query Frame = 1

		  
Query: 29  MATLTTILLSCKPQKPLKTLTSIACSSQSSPSFISFSLRQNIKHLVCKTLPRCSMDNRNS 88
           MATLT  L  CKPQ   KTL  I+CS  SS S  SFSLRQNIKHLVCKT  RCS+ N++S
Sbjct: 1   MATLTKTLY-CKPQFVRKTLIPISCSFSSS-SIPSFSLRQNIKHLVCKTESRCSLSNQDS 60

Query: 89  NDSMGTYPRPLEIQWKKELCNSVQLIGIVGLPVQFNQLSSGKVVASTRLAVRKSPTDTSW 148
            DSMGTY RP EIQWKKELCNSVQLIGIV LPVQ   LSSGKVVASTRLAVRKS T+TSW
Sbjct: 61  YDSMGTYTRPSEIQWKKELCNSVQLIGIVALPVQLTHLSSGKVVASTRLAVRKSATNTSW 120

Query: 149 INLTFWEELAHVAHQHLEKGQQIYVSGRLVSDTVESEDGKQQTYYKVVVQQLNFIERNSS 208
           INLT W+ELAHVAHQHLEKGQQI+VSGRLVSDTV++EDGKQQTYYKVVVQQLNF+ERNSS
Sbjct: 121 INLTLWDELAHVAHQHLEKGQQIFVSGRLVSDTVDNEDGKQQTYYKVVVQQLNFVERNSS 180

Query: 209 SPVPLYDGSSDSTATVAKFDNTAAPSKLSTQELWQAFFANPTEWWDNRKNKKTPKYPDFK 268
           SPV LYD +SDST+TV KF    A +KLSTQELWQA+FANPT+WWDNRKNKK  K PDFK
Sbjct: 181 SPVALYDDNSDSTSTVGKFVKAPAINKLSTQELWQAYFANPTDWWDNRKNKKNLKSPDFK 240

Query: 269 HKDTGEALWVDARYNPPWVKSQLEVLDSR-MQSVQKQEDTSFSNYFNGGY 318
           HKDTGEALWV++RYNPPWVKSQLE+LDSR MQS+QKQE  SFS+YFNGGY
Sbjct: 241 HKDTGEALWVESRYNPPWVKSQLEILDSRMMQSLQKQEGPSFSDYFNGGY 288

[Close]

BLAST of Spo02285.1 vs. UniProtKB/TrEMBL
Match: D7SQJ9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0141g00260 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 3.600e-85
Identity = 170/282 (60.28%), Postives = 204/282 (72.34%), Query Frame = 1

		  
Query: 34  TILLSCKPQKPLKTLTSIACSSQSSPSFISFSLRQNIKHLVCKTLPRCSMDNRNSNDSMG 93
           T +L+C P+ PL    ++  S   +P F S  L Q    L C  +  C+ +N + N ++ 
Sbjct: 9   TSILNCVPKTPLFKTQTLFLSPCPNPFFSS--LPQPKTQLRCSII--CNYNNDHHNQAV- 68

Query: 94  TYPRPLEIQWKKELCNSVQLIGIVGLPVQFNQLSSGKVVASTRLAVRKSPTDTSWINLTF 153
           +YPRP E+ WKKELCNSV LIGIVG PV+   LSSGKV+A TRLAVRKS +DT+WINLTF
Sbjct: 69  SYPRPSEVPWKKELCNSVSLIGIVGAPVEIKHLSSGKVLAWTRLAVRKSASDTTWINLTF 128

Query: 154 WEELAHVAHQHLEKGQQIYVSGRLVSDTVESEDGKQQTYYKVVVQQLNFIERNSSSPVPL 213
           W+ELAHVA QH+EKGQQIYVSGRLVSDTVE+++GKQQTYYKVVVQQLNF+ER+ SS    
Sbjct: 129 WDELAHVASQHVEKGQQIYVSGRLVSDTVENDEGKQQTYYKVVVQQLNFVERSFSSA--- 188

Query: 214 YDGSSDSTATVAKFDNTAAPSKLSTQELWQAFFANPTEWWDNRKNKKTPKYPDFKHKDTG 273
               S+S A   K  + A  S  S +ELWQAFFANP +WWDNRK KK PKYPDFKHKDTG
Sbjct: 189 --DESNSLAAGRKLGSPATNSTGSIEELWQAFFANPVDWWDNRKTKKNPKYPDFKHKDTG 248

Query: 274 EALWVDARYNPPWVKSQLEVLDSRMQSVQKQEDTSFSNYFNG 316
           EALWV+ RYNP WVKSQL +LDSRM+S + Q+     N   G
Sbjct: 249 EALWVEGRYNPSWVKSQLAILDSRMESFRDQDARMHVNLMAG 280

[Close]

BLAST of Spo02285.1 vs. UniProtKB/TrEMBL
Match: K4CUL0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 6.200e-85
Identity = 170/294 (57.82%), Postives = 205/294 (69.73%), Query Frame = 1

		  
Query: 33  TTILLSCKPQKPLKTLTSIACSSQSSPSFISFSLRQNIKHLVCKTLPRCSMDNRNSNDSM 92
           T    S  P+ P K+L         S  F S S +     L      RCS +  +S +  
Sbjct: 10  TNPFFSSTPRTPAKSL---------SFRFFSQSKQVQTAKLASGCRIRCSFEYNSSGNGN 69

Query: 93  GT------------YPRPLEIQWKKELCNSVQLIGIVGLPVQFNQLSSGKVVASTRLAVR 152
           G+            YPRP E+QWKKELCNSVQLIG V +PVQ   L+SGKVVA TRLAVR
Sbjct: 70  GSVYEYERYAGVSQYPRPSEVQWKKELCNSVQLIGNVAVPVQIKHLNSGKVVAWTRLAVR 129

Query: 153 KSPTDTSWINLTFWEELAHVAHQHLEKGQQIYVSGRLVSDTVESEDGKQQTYYKVVVQQL 212
           KS  DT+WINLTFW++LA+VA+QH+EKGQQIYVSGRL+SDTVE +DGK+QTYYKVVVQQL
Sbjct: 130 KSQNDTTWINLTFWDDLANVANQHVEKGQQIYVSGRLISDTVEGDDGKEQTYYKVVVQQL 189

Query: 213 NFIERNSSSPVPLYDGSSDSTATVAKFDNTAAPSKLSTQELWQAFFANPTEWWDNRKNKK 272
           NFIE+ SS P+  Y+G S+S A   K +N AA +  ST+ELWQAFFANP EWWDNRKNK+
Sbjct: 190 NFIEK-SSPPIASYNGDSNSMAPRKKQNNFAANTTGSTEELWQAFFANPLEWWDNRKNKR 249

Query: 273 TPKYPDFKHKDTGEALWVDARYNPPWVKSQLEVLDSRMQSVQKQEDTSFSNYFN 315
           +P YPDFKHKDTGEALWV+ RYNP WVKSQL VLDS+M+S   Q  +  + + +
Sbjct: 250 SPNYPDFKHKDTGEALWVEGRYNPTWVKSQLAVLDSKMESFHDQNGSRNAEFMS 293

[Close]

BLAST of Spo02285.1 vs. UniProtKB/TrEMBL
Match: M1BPA7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400019333 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 1.400e-84
Identity = 158/248 (63.71%), Postives = 190/248 (76.61%), Query Frame = 1

		  
Query: 80  RCSMDNRNSND-------------SMGTYPRPLEIQWKKELCNSVQLIGIVGLPVQFNQL 139
           RCS +  NS+               +  YPRP E+QWKKELCNSVQLIG V +PVQ   L
Sbjct: 48  RCSFEYNNSSGIGNGSVYEYERYAGVSQYPRPSEVQWKKELCNSVQLIGNVAVPVQIKHL 107

Query: 140 SSGKVVASTRLAVRKSPTDTSWINLTFWEELAHVAHQHLEKGQQIYVSGRLVSDTVESED 199
           +SGKVVA TRLAVRKS  DT+WINLTFW++LA+VA+QH+EKGQQIYVSGRL+SDTVE +D
Sbjct: 108 NSGKVVAWTRLAVRKSQNDTTWINLTFWDDLANVANQHVEKGQQIYVSGRLISDTVEGDD 167

Query: 200 GKQQTYYKVVVQQLNFIERNSSSPVPLYDGSSDSTATVAKFDNTAAPSKLSTQELWQAFF 259
           GK+QTYYKVVVQQLNF+E+N S P+  Y+G S+S A   K +N AA +  ST+ELWQAFF
Sbjct: 168 GKEQTYYKVVVQQLNFVEKN-SPPMASYNGDSNSMAPRKKQNNYAANTTGSTEELWQAFF 227

Query: 260 ANPTEWWDNRKNKKTPKYPDFKHKDTGEALWVDARYNPPWVKSQLEVLDSRMQSVQKQED 315
           ANP EWWDNRKNK++P YPDFKHKDTGEALWV+ RYNP WVKSQL VLDS+M+S   Q  
Sbjct: 228 ANPLEWWDNRKNKRSPNYPDFKHKDTGEALWVEGRYNPTWVKSQLAVLDSKMESFHDQNG 287

[Close]

BLAST of Spo02285.1 vs. ExPASy Swiss-Prot
Match: OSB1_ARATH (Protein OSB1, mitochondrial OS=Arabidopsis thaliana GN=OSB1 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.200e-27
Identity = 80/224 (35.71%), Postives = 115/224 (51.34%), Query Frame = 1

		  
Query: 95  YPRPLEIQWKKELCNSVQLIGIVGLPVQFNQLSSGKVVASTRLAVRK--SPTDTSWINLT 154
           + +PL  + K  L NSV L+G V   +Q       +    T L V+   +P  +  I+L 
Sbjct: 42  FKKPLSTKLKFNLVNSVSLMGFVDRSIQVMNTGPDRFGVFTILRVKDPLNPNRSFRISLR 101

Query: 155 FWEELAHVAHQHLEKGQQIYVSGRLVSDTVESED--GKQQTYYKVVVQQLNFIERNSSSP 214
            W+ +A     HL+    I VSGRL S +  S D        Y+V V ++N++   ++ P
Sbjct: 102 MWDAMARTCIAHLKLNDHILVSGRLESYSKSSSDVYSGLNLDYQVKVAEVNYV---AAPP 161

Query: 215 VPLYDGSSDSTATVAKFDNTAAPSKLSTQELWQAFFANPTEWWDNRKNKKTPKYPDFKHK 274
             + D S  S     K ++    SK     LWQ FF+NP +WWDNR+NKK PK PDFKHK
Sbjct: 162 SHVLD-SQISKNPKTKTEDDIEESKKDEIYLWQVFFSNPYDWWDNRRNKKNPKQPDFKHK 221

Query: 275 DTGEALWVDARYNPPWVKSQLEVLD--SRMQSVQKQEDTSFSNY 313
           DTGEALW+ +   P W+  +LE+ D  +R    +K      S+Y
Sbjct: 222 DTGEALWLCSDL-PDWITRRLELFDQKNRFYDEEKTRRDRLSDY 260

[Close]

BLAST of Spo02285.1 vs. ExPASy Swiss-Prot
Match: OSB2_ARATH (Protein OSB2, chloroplastic OS=Arabidopsis thaliana GN=OSB2 PE=1 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 8.400e-27
Identity = 81/210 (38.57%), Postives = 113/210 (53.81%), Query Frame = 1

		  
Query: 96  PRPLEIQWKKELCNSVQLIGIVGLPVQFNQLSSGKVVASTRLAVRKSPTDTS--WINLTF 155
           PRP EI ++ E+ N V LIG V  PVQF   S GK  A T ++ R S +D+S  WI + F
Sbjct: 86  PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQR-SASDSSGFWIPIIF 145

Query: 156 WEELAHVAHQHLEKGQQIYVSGRLVSDTVESEDGKQQTYYKVVVQQLNFIERNSSSPVP- 215
             +LA  A +++ K  QI+VSG+L  D+        Q   +V+VQ LNFI+  S SP P 
Sbjct: 146 EGDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSPSPSPF 205

Query: 216 LYDGSSDSTATVAKFDNTAAPSKLSTQEL---WQAFFANPTEWWDNRKNKKT----PKYP 275
           +   SS+   +  K     A   +   E    W     NP EWWD+R+NK      P++P
Sbjct: 206 MVMSSSEKEESGIKKQPARAKQDIVIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHP 265

Query: 276 DFKHKDTGEALWVDARYNPPWVKSQLEVLD 296
           DFK KD+  +LW++    P WV  +LE L+
Sbjct: 266 DFKSKDSSFSLWLNKA--PNWVLPKLEGLE 292

[Close]

BLAST of Spo02285.1 vs. ExPASy Swiss-Prot
Match: OSB3_ARATH (Protein OSB3, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=OSB3 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 8.200e-22
Identity = 69/204 (33.82%), Postives = 104/204 (50.98%), Query Frame = 1

		  
Query: 98  PLEIQWKKELCNSVQLIGIVGLPVQFNQLSSGKVVASTRLAVRK-SPTDTSWINLTFWEE 157
           P +I++K E+ N + LIG V  PVQF   S GK  A T ++ R  S +   WI + F  +
Sbjct: 71  PKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGD 130

Query: 158 LAHVAHQHLEKGQQIYVSGRLVSDTVESEDGKQQTYYKVVVQQLNFIERNSSSPVPLYDG 217
           LA +A QH++K  +I+VSG+L  D+        Q+  +V+VQ LNF++  +S+   +   
Sbjct: 131 LAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATSTTKTISPP 190

Query: 218 SSDSTATVAKFDNTAAPSKL--STQELWQAFFANPTEWWDNRKNKKT----PKYPDFKHK 277
             + T+   K   +     +   T   W+    NP EW D+R NK      P +PDFK K
Sbjct: 191 EKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMK 250

Query: 278 DTGEALWVDARYNPPWVKSQLEVL 295
             G +LW+     P W   +LE L
Sbjct: 251 VGGLSLWLSTA--PDWALLKLEEL 272

[Close]

BLAST of Spo02285.1 vs. ExPASy Swiss-Prot
Match: OSB4_ARATH (Protein OSB4, chloroplastic OS=Arabidopsis thaliana GN=OSB4 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.800e-21
Identity = 64/209 (30.62%), Postives = 110/209 (52.63%), Query Frame = 1

		  
Query: 95  YPRPLEIQWKKELCNSVQLIGIVGLPVQFNQLSSGKVVASTRLAVR-----KSPTDTS-- 154
           +PRP+E+ ++ ++ NS+ LIG V  PVQF+    GK  A T ++       KS +D+S  
Sbjct: 59  WPRPMEVPYQPKIANSIDLIGYVHQPVQFDSTLDGKFWAGTVISHEPSSDSKSESDSSSN 118

Query: 155 -WINLTFWEELAHVAHQHLEKGQQIYVSGRLVSDTVESEDGKQQTY------------YK 214
            WI + F  +LAH A+ +L+K  +++++G+++ D ++S     Q +            ++
Sbjct: 119 FWIPVLFEGDLAHTANSYLKKNDRVHITGQILGDVIQSGANSDQAHVQLFKSFHGSFSHQ 178

Query: 215 VVVQQLNFIERNSSSPVPLYDGSSDSTATVAKFDNTAAPSKLSTQELWQAFFANPTEWWD 274
           V+V+ L++IE + + P  L   + D    V K   +    +     LW      P EW D
Sbjct: 179 VMVRDLHYIEGSKAMPKVL--PTLDQNEGVLKHSASVQRGREFGTNLWFDLVDKPNEWCD 238

Query: 275 NRKNKK----TPKYPDFKHKDTGEALWVD 280
            R+ K+     PK+PDFK KD  +ALW++
Sbjct: 239 YREMKQNGSVNPKHPDFKKKDGSQALWLN 265

[Close]

BLAST of Spo02285.1 vs. ExPASy Swiss-Prot
Match: SSB_NEIMA (Single-stranded DNA-binding protein OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN=ssb PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 8.800e-8
Identity = 34/122 (27.87%), Postives = 62/122 (50.82%), Query Frame = 1

		  
Query: 109 NSVQLIGIVGLPVQFNQLSSGKVVASTRLAVRKSPTD--------TSWINLTFWEELAHV 168
           N V LIG +G   +   + +G+ V +  +A  ++  D        T W N+T + +LA +
Sbjct: 4   NKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQRVERTEWHNITMYRKLAEI 63

Query: 169 AHQHLEKGQQIYVSGRLVSDTVESEDGKQQTYYKVVVQQLNFI--ERNSSSPVPLYDGSS 221
           A Q+L+KG  +Y+ GR+ S   + +DG ++T Y +V  ++  +     +S   P  +G  
Sbjct: 64  AGQYLKKGGLVYLEGRIQSRKYQGKDGIERTAYDIVANEMKMLGGRNENSGGAPYEEGYG 123

[Close]

BLAST of Spo02285.1 vs. TAIR (Arabidopsis)
Match: AT1G47720.1 (Primosome PriB/single-strand DNA-binding)

HSP 1 Score: 124.4 bits (311), Expect = 1.300e-28
Identity = 80/224 (35.71%), Postives = 115/224 (51.34%), Query Frame = 1

		  
Query: 95  YPRPLEIQWKKELCNSVQLIGIVGLPVQFNQLSSGKVVASTRLAVRK--SPTDTSWINLT 154
           + +PL  + K  L NSV L+G V   +Q       +    T L V+   +P  +  I+L 
Sbjct: 42  FKKPLSTKLKFNLVNSVSLMGFVDRSIQVMNTGPDRFGVFTILRVKDPLNPNRSFRISLR 101

Query: 155 FWEELAHVAHQHLEKGQQIYVSGRLVSDTVESED--GKQQTYYKVVVQQLNFIERNSSSP 214
            W+ +A     HL+    I VSGRL S +  S D        Y+V V ++N++   ++ P
Sbjct: 102 MWDAMARTCIAHLKLNDHILVSGRLESYSKSSSDVYSGLNLDYQVKVAEVNYV---AAPP 161

Query: 215 VPLYDGSSDSTATVAKFDNTAAPSKLSTQELWQAFFANPTEWWDNRKNKKTPKYPDFKHK 274
             + D S  S     K ++    SK     LWQ FF+NP +WWDNR+NKK PK PDFKHK
Sbjct: 162 SHVLD-SQISKNPKTKTEDDIEESKKDEIYLWQVFFSNPYDWWDNRRNKKNPKQPDFKHK 221

Query: 275 DTGEALWVDARYNPPWVKSQLEVLD--SRMQSVQKQEDTSFSNY 313
           DTGEALW+ +   P W+  +LE+ D  +R    +K      S+Y
Sbjct: 222 DTGEALWLCSDL-PDWITRRLELFDQKNRFYDEEKTRRDRLSDY 260

[Close]

BLAST of Spo02285.1 vs. TAIR (Arabidopsis)
Match: AT4G20010.1 (plastid transcriptionally active 9)

HSP 1 Score: 122.5 bits (306), Expect = 4.800e-28
Identity = 81/210 (38.57%), Postives = 113/210 (53.81%), Query Frame = 1

		  
Query: 96  PRPLEIQWKKELCNSVQLIGIVGLPVQFNQLSSGKVVASTRLAVRKSPTDTS--WINLTF 155
           PRP EI ++ E+ N V LIG V  PVQF   S GK  A T ++ R S +D+S  WI + F
Sbjct: 86  PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQR-SASDSSGFWIPIIF 145

Query: 156 WEELAHVAHQHLEKGQQIYVSGRLVSDTVESEDGKQQTYYKVVVQQLNFIERNSSSPVP- 215
             +LA  A +++ K  QI+VSG+L  D+        Q   +V+VQ LNFI+  S SP P 
Sbjct: 146 EGDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSPSPSPF 205

Query: 216 LYDGSSDSTATVAKFDNTAAPSKLSTQEL---WQAFFANPTEWWDNRKNKKT----PKYP 275
           +   SS+   +  K     A   +   E    W     NP EWWD+R+NK      P++P
Sbjct: 206 MVMSSSEKEESGIKKQPARAKQDIVIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHP 265

Query: 276 DFKHKDTGEALWVDARYNPPWVKSQLEVLD 296
           DFK KD+  +LW++    P WV  +LE L+
Sbjct: 266 DFKSKDSSFSLWLNKA--PNWVLPKLEGLE 292

[Close]

BLAST of Spo02285.1 vs. TAIR (Arabidopsis)
Match: AT5G44785.2 (organellar single-stranded DNA binding protein 3)

HSP 1 Score: 105.9 bits (263), Expect = 4.600e-23
Identity = 69/204 (33.82%), Postives = 104/204 (50.98%), Query Frame = 1

		  
Query: 98  PLEIQWKKELCNSVQLIGIVGLPVQFNQLSSGKVVASTRLAVRK-SPTDTSWINLTFWEE 157
           P +I++K E+ N + LIG V  PVQF   S GK  A T ++ R  S +   WI + F  +
Sbjct: 71  PKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGD 130

Query: 158 LAHVAHQHLEKGQQIYVSGRLVSDTVESEDGKQQTYYKVVVQQLNFIERNSSSPVPLYDG 217
           LA +A QH++K  +I+VSG+L  D+        Q+  +V+VQ LNF++  +S+   +   
Sbjct: 131 LAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATSTTKTISPP 190

Query: 218 SSDSTATVAKFDNTAAPSKL--STQELWQAFFANPTEWWDNRKNKKT----PKYPDFKHK 277
             + T+   K   +     +   T   W+    NP EW D+R NK      P +PDFK K
Sbjct: 191 EKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMK 250

Query: 278 DTGEALWVDARYNPPWVKSQLEVL 295
             G +LW+     P W   +LE L
Sbjct: 251 VGGLSLWLSTA--PDWALLKLEEL 272

[Close]

BLAST of Spo02285.1 vs. TAIR (Arabidopsis)
Match: AT1G31010.1 (organellar single-stranded DNA binding protein 4)

HSP 1 Score: 104.8 bits (260), Expect = 1.000e-22
Identity = 64/209 (30.62%), Postives = 110/209 (52.63%), Query Frame = 1

		  
Query: 95  YPRPLEIQWKKELCNSVQLIGIVGLPVQFNQLSSGKVVASTRLAVR-----KSPTDTS-- 154
           +PRP+E+ ++ ++ NS+ LIG V  PVQF+    GK  A T ++       KS +D+S  
Sbjct: 59  WPRPMEVPYQPKIANSIDLIGYVHQPVQFDSTLDGKFWAGTVISHEPSSDSKSESDSSSN 118

Query: 155 -WINLTFWEELAHVAHQHLEKGQQIYVSGRLVSDTVESEDGKQQTY------------YK 214
            WI + F  +LAH A+ +L+K  +++++G+++ D ++S     Q +            ++
Sbjct: 119 FWIPVLFEGDLAHTANSYLKKNDRVHITGQILGDVIQSGANSDQAHVQLFKSFHGSFSHQ 178

Query: 215 VVVQQLNFIERNSSSPVPLYDGSSDSTATVAKFDNTAAPSKLSTQELWQAFFANPTEWWD 274
           V+V+ L++IE + + P  L   + D    V K   +    +     LW      P EW D
Sbjct: 179 VMVRDLHYIEGSKAMPKVL--PTLDQNEGVLKHSASVQRGREFGTNLWFDLVDKPNEWCD 238

Query: 275 NRKNKK----TPKYPDFKHKDTGEALWVD 280
            R+ K+     PK+PDFK KD  +ALW++
Sbjct: 239 YREMKQNGSVNPKHPDFKKKDGSQALWLN 265

The following BLAST results are available for this feature:

BLAST of Spo02285.1 vs. NCBI nr
BLAST of Spo02285.1 vs. UniProtKB/TrEMBL
BLAST of Spo02285.1 vs. ExPASy Swiss-Prot
BLAST of Spo02285.1 vs. TAIR (Arabidopsis)

BLAST of Spo02285.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902188412\|gb\|KNA11146.1\|	8.1e-163	99.3	hypothetical protein SOVF_1380...	[more]
gi\|731336267\|ref\|XP_010679163.1\|	6.3e-123	79.3	PREDICTED: protein OSB2, chlor...	[more]
gi\|747071463\|ref\|XP_011082602.1\|	9.5e-87	61.6	PREDICTED: protein OSB4, chlor...	[more]
gi\|970053759\|ref\|XP_015088508.1\|	5.2e-85	64.3	PREDICTED: protein OSB2, chlor...	[more]
gi\|731394705\|ref\|XP_010651930.1\|	5.2e-85	60.2	PREDICTED: protein OSB2, chlor...	[more]

BLAST of Spo02285.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9QXC0_SPIOL	5.7e-163	99.3	Uncharacterized protein OS=Spi...	[more]
A0A0J8CE35_BETVU	4.4e-123	79.3	Uncharacterized protein OS=Bet...	[more]
D7SQJ9_VITVI	3.6e-85	60.2	Putative uncharacterized prote...	[more]
K4CUL0_SOLLC	6.2e-85	57.8	Uncharacterized protein OS=Sol...	[more]
M1BPA7_SOLTU	1.4e-84	63.7	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo02285.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
OSB1_ARATH	2.2e-27	35.7	Protein OSB1, mitochondrial OS...	[more]
OSB2_ARATH	8.4e-27	38.5	Protein OSB2, chloroplastic OS...	[more]
OSB3_ARATH	8.2e-22	33.8	Protein OSB3, chloroplastic/mi...	[more]
OSB4_ARATH	1.8e-21	30.6	Protein OSB4, chloroplastic OS...	[more]
SSB_NEIMA	8.8e-8	27.8	Single-stranded DNA-binding pr...	[more]

BLAST of Spo02285.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4

Position :

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Match Name	E-value	Identity	Description
AT1G47720.1	1.3e-28	35.7	Primosome PriB/single-strand D...	[more]
AT4G20010.1	4.8e-28	38.5	plastid transcriptionally acti...	[more]
AT5G44785.2	4.6e-23	33.8	organellar single-stranded DNA...	[more]
AT1G31010.1	1.0e-22	30.6	organellar single-stranded DNA...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000424	Primosome PriB/single-strand DNA-binding	PFAM	PF00436	SSB	coord: 109..202 score: 1.3
IPR000424	Primosome PriB/single-strand DNA-binding	PROFILE	PS50935	SSB	coord: 107..204 score: 21
IPR011344	Single-stranded DNA-binding protein	PANTHER	PTHR10302	SINGLE-STRANDED DNA-BINDING PROTEIN	coord: 94..306 score: 5.8
IPR011344	Single-stranded DNA-binding protein	TIGRFAMs	TIGR00621	TIGR00621	coord: 108..207 score: 3.4
IPR012340	Nucleic acid-binding, OB-fold	GENE3D	2.40.50.140		coord: 108..206 score: 9.2
IPR012340	Nucleic acid-binding, OB-fold	unknown	SSF50249	Nucleic acid-binding proteins	coord: 109..289 score: 4.8
None	No IPR available	PANTHER	PTHR10302:SF0	SINGLE-STRANDED DNA-BINDING PROTEIN, MITOCHONDRIAL	coord: 94..306 score: 5.8

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006260	DNA replication
molecular_function	GO:0003697	single-stranded DNA binding