Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATATATATATACTCCCTCAAAACCCAGGAATTTAAGGTATACAAACCAAATAATCTATTATCAAAGAATTGAAGAAAAAAAAACCAAGAGAGAAAACAGAGAAAAATGTCATCCGAATGCCCAGGTAATTAATTAATCCAGCTTTAATTTCTGATGAAATTATCGAGTATTTATTTAAATTAGCAAAATCATTTCATCATTCTAATTTAATTAGTGTTATACAATTTTATTGATACCTCTACTTAATCCATTGTTAATTTTATAGGGAAGAATGCGTGGCCAGAACTAGTCGGAGAAAATGGGGAGAGGGCTGCGGAAATTATAAGGGAAGAAAACCCTAATGTTACTCAGACGACCGTGCTACCAGATGGAACACCCGTTATACTAGACTTCAGGTGTGATCGGGTTTGGATATTTGTTGACTGTCACGGCAATGTGGTTCGTACTCCTACGATCGGTTAACTTACACGTCTTGCCGATCGATCGGGCATAAATTATACGTAGTACTCCGTAATGTTGTAATATGTGCAAAACATATACTTGTATGAATGTTTGCTTACTAATATATGTCAAATGTGTACGTACTAATACGTTGTTTTACTTGATTAATCGATGTACCCTTCAAACTTTCTATGTACTATTTCCATTATGTACAATAAAGTTTATTGAAAATAATAATTGAGCTATTTTTAT ATATATATATACTCCCTCAAAACCCAGGAATTTAAGGTATACAAACCAAATAATCTATTATCAAAGAATTGAAGAAAAAAAAACCAAGAGAGAAAACAGAGAAAAATGTCATCCGAATGCCCAGGGAAGAATGCGTGGCCAGAACTAGTCGGAGAAAATGGGGAGAGGGCTGCGGAAATTATAAGGGAAGAAAACCCTAATGTTACTCAGACGACCGTGCTACCAGATGGAACACCCGTTATACTAGACTTCAGGTGTGATCGGGTTTGGATATTTGTTGACTGTCACGGCAATGTGGTTCGTACTCCTACGATCGGTTAACTTACACGTCTTGCCGATCGATCGGGCATAAATTATACGTAGTACTCCGTAATGTTGTAATATGTGCAAAACATATACTTGTATGAATGTTTGCTTACTAATATATGTCAAATGTGTACGTACTAATACGTTGTTTTACTTGATTAATCGATGTACCCTTCAAACTTTCTATGTACTATTTCCATTATGTACAATAAAGTTTATTGAAAATAATAATTGAGCTATTTTTAT ATGTCATCCGAATGCCCAGGGAAGAATGCGTGGCCAGAACTAGTCGGAGAAAATGGGGAGAGGGCTGCGGAAATTATAAGGGAAGAAAACCCTAATGTTACTCAGACGACCGTGCTACCAGATGGAACACCCGTTATACTAGACTTCAGGTGTGATCGGGTTTGGATATTTGTTGACTGTCACGGCAATGTGGTTCGTACTCCTACGATCGGTTAA MSSECPGKNAWPELVGENGERAAEIIREENPNVTQTTVLPDGTPVILDFRCDRVWIFVDCHGNVVRTPTIG Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo02312.1 vs. NCBI nr
Match: gi|902228142|gb|KNA20991.1| (hypothetical protein SOVF_047420 [Spinacia oleracea]) HSP 1 Score: 157.1 bits (396), Expect = 1.100e-35 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1
BLAST of Spo02312.1 vs. NCBI nr
Match: gi|870850753|gb|KMT02819.1| (hypothetical protein BVRB_8g194020 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 124.4 bits (311), Expect = 7.900e-26 Identity = 55/71 (77.46%), Postives = 61/71 (85.92%), Query Frame = 1
BLAST of Spo02312.1 vs. NCBI nr
Match: gi|902228140|gb|KNA20989.1| (hypothetical protein SOVF_047400 [Spinacia oleracea]) HSP 1 Score: 101.3 bits (251), Expect = 7.200e-19 Identity = 47/67 (70.15%), Postives = 52/67 (77.61%), Query Frame = 1
BLAST of Spo02312.1 vs. NCBI nr
Match: gi|731336338|ref|XP_010679203.1| (PREDICTED: glu S.griseus protease inhibitor-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 100.5 bits (249), Expect = 1.200e-18 Identity = 47/69 (68.12%), Postives = 52/69 (75.36%), Query Frame = 1
BLAST of Spo02312.1 vs. NCBI nr
Match: gi|902228141|gb|KNA20990.1| (hypothetical protein SOVF_047410 [Spinacia oleracea]) HSP 1 Score: 100.1 bits (248), Expect = 1.600e-18 Identity = 47/71 (66.20%), Postives = 52/71 (73.24%), Query Frame = 1
BLAST of Spo02312.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RN89_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_047420 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 7.700e-36 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1
BLAST of Spo02312.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BS38_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g194020 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 5.500e-26 Identity = 55/71 (77.46%), Postives = 61/71 (85.92%), Query Frame = 1
BLAST of Spo02312.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQ05_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_047400 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 5.000e-19 Identity = 47/67 (70.15%), Postives = 52/67 (77.61%), Query Frame = 1
BLAST of Spo02312.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CE73_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g120640 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 8.600e-19 Identity = 47/69 (68.12%), Postives = 52/69 (75.36%), Query Frame = 1
BLAST of Spo02312.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RN96_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_047410 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.100e-18 Identity = 47/71 (66.20%), Postives = 52/71 (73.24%), Query Frame = 1
BLAST of Spo02312.1 vs. ExPASy Swiss-Prot
Match: ATSI_AMACA (Trypsin/subtilisin inhibitor OS=Amaranthus caudatus PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 3.700e-15 Identity = 39/67 (58.21%), Postives = 46/67 (68.66%), Query Frame = 1
BLAST of Spo02312.1 vs. ExPASy Swiss-Prot
Match: ICI_LINUS (Proteinase inhibitor OS=Linum usitatissimum PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.100e-14 Identity = 37/69 (53.62%), Postives = 45/69 (65.22%), Query Frame = 1
BLAST of Spo02312.1 vs. ExPASy Swiss-Prot
Match: ITH5_CUCMA (Inhibitor of trypsin and hageman factor OS=Cucurbita maxima PE=1 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 1.200e-13 Identity = 37/69 (53.62%), Postives = 46/69 (66.67%), Query Frame = 1
BLAST of Spo02312.1 vs. ExPASy Swiss-Prot
Match: ICI1_SOLPE (Wound-induced proteinase inhibitor 1 OS=Solanum peruvianum PE=3 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.300e-12 Identity = 33/68 (48.53%), Postives = 45/68 (66.18%), Query Frame = 1
BLAST of Spo02312.1 vs. ExPASy Swiss-Prot
Match: HPI_HEVBR (Protease inhibitor HPI OS=Hevea brasiliensis GN=PI1 PE=1 SV=2) HSP 1 Score: 71.6 bits (174), Expect = 3.800e-12 Identity = 35/71 (49.30%), Postives = 48/71 (67.61%), Query Frame = 1
BLAST of Spo02312.1 vs. TAIR (Arabidopsis)
Match: AT2G38870.1 (Serine protease inhibitor, potato inhibitor I-type family protein) HSP 1 Score: 87.8 bits (216), Expect = 2.900e-18 Identity = 41/71 (57.75%), Postives = 50/71 (70.42%), Query Frame = 1
BLAST of Spo02312.1 vs. TAIR (Arabidopsis)
Match: AT5G43580.1 (Serine protease inhibitor, potato inhibitor I-type family protein) HSP 1 Score: 65.9 bits (159), Expect = 1.200e-11 Identity = 35/73 (47.95%), Postives = 47/73 (64.38%), Query Frame = 1
BLAST of Spo02312.1 vs. TAIR (Arabidopsis)
Match: AT2G38900.2 (Serine protease inhibitor, potato inhibitor I-type family protein) HSP 1 Score: 60.5 bits (145), Expect = 5.000e-10 Identity = 31/65 (47.69%), Postives = 41/65 (63.08%), Query Frame = 1
BLAST of Spo02312.1 vs. TAIR (Arabidopsis)
Match: AT3G46860.1 (Serine protease inhibitor, potato inhibitor I-type family protein) HSP 1 Score: 56.2 bits (134), Expect = 9.400e-9 Identity = 29/64 (45.31%), Postives = 38/64 (59.38%), Query Frame = 1
BLAST of Spo02312.1 vs. TAIR (Arabidopsis)
Match: AT5G43570.1 (Serine protease inhibitor, potato inhibitor I-type family protein) HSP 1 Score: 54.3 bits (129), Expect = 3.600e-8 Identity = 27/61 (44.26%), Postives = 36/61 (59.02%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo02312.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo02312.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo02312.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo02312.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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