Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGTCTCCTCACCACAATGCAATATCCCAACACCCATTAGCTGTTTTATATTGTGCCCATAAACAAAGGTAAACAAAAAAGGAAACCCCTTAACCATAAACTAAACCCCACCAAAGACTAAACAAATCAAATAAAACTGCTTGGTGTTTGGGTTCATCATCTAAGGTCATCCCCACCGATCGTTCTGATCAAACGGTCCACACGAGGCGCGTGGGCCCGGGGCCGCGGCTCGGGATAGCTTTTTTCTTGTGTGTGTGGATGGGCCAATAAAATAATTCCCTTGTATATTGCACACAGAAAGCAGAATAAATTCCGACTTAGATGTGTGTTTTATTCTGTCTCCTTTACCTAATCAATCCTGTTTATATAATAGTATTCCTTTACCTTCTTCCTATCTCCTCACCACAACTCAGCATATTTCTCATTCTCTCAAGTTTCTTTCTGATCATCAACAACAAAGGTTTCAACAAGCTGTTATATATTCAAATTGATCAAACTGTTTCAACAACCAAAATCAGAGTTTTTGTAACAAGGATTGATTTTTAAGTTTAAGGGAATATCATCAATCAAGAAACAACAATGGCAAGGTCTGAGACATACGAAAACGATCTTCATCTTGAAGCAACTGAGCTAAGATTAGGATTACCTGGTAGCAAAGAGCCACAATCAACTTCTAATAATGTGGCAAGAAGTAACAAGAGATCATCACCTGATCAACTGCATGAGGATTCCTCTTCAACAAACAATTCCAGTGTTTCTGATGCTAGAAATGAAGATTGCCCCCCTCCTTCCAAGTAAGTATTGATTCACAATCTCCCTTTAAATCCTAAACACACCATAAAAAAATAAAAAAATAAAAAAATAAATTGAAAAATGATTAGCAAAAACTTAACGATTTACATTATCAAAATCTGCAGGGCACAAATTGTTGGATGGCCACCAATCAGATCATACAGGAAGAACACCCTCCAACCCAAGAAGACAGAGTCTGATGTTTCTGGGATGTATGTGAAAGTAAGCATGGATGGAGCACCATACCTGAGGAAGATTGACCTGAAGTTGTACCAGAGTTATACAGAACTGTTGAAGGCCTTAGAAAGTATGTTCAGGATCTGTATCGGCCAATACTCCGAAAGAGACGGATACAACGGTTCTGATGTTGCACCTACCTATGAAGACAAAGATGGTGACTGGATGCTGGTTGGAGATGTACCATGGGAGATGTTCAACACTTCCTGCAAAAGGCTTCGAATCATGAAGTCTTCAGAAGCAAAGGGACTTGGGTGTCTATGAGAAAAAGAGAGAAATTCCTGTCAAAGGTGCTAAAATTCAACATAGATCAGCAGATAATCCAAGCAATGAAAAAGCTTCTGTTTTGGTTTAGGAATACATACAGAGAATTGTCAGATCAGAAAAATTTTCACTTTCTTTTTTTCATTTTGTGTTCTTTTTTGGTTTCTTGTGACGTTCTTGGATGGTTTTGAGTTTCATTCTGGTTTTGCAGCAACAAACTGATAACAAAAGTCAAAACCCCTGTACTTTCTTATACTTTGGATATATATGTATTCGCCTGAGATTCAATTGTACAAATGCAGAAAAAATAGATTTGACAGAGAAAAAAGCCAAAAGTAACAATAACATTGTTGACAATACATATACACTTATGTTCTAGAGTGTTCCCCCCATTTCCTCTGTCAATACTTCTGCAGATATCCTCAGAATTTACTTTCATAGTCAGGATATGACATCAATCAGCCTCTCTGATGATCATATATTACAAAAACGATTTCTCCAATTTAAGACCCAGAACTTGGAAATTTTAGAAGTTCAAAAAAATTAAAGCAACCATATCATGTATGACTAAACAGGTATCTCACTCTACAAGATACTACATTATCTCTCAGCAAAAGGAATCATAGGATTGGGAATATTTAGCTACAATTAGCCACAACCAAGAAATACTTGGGAGAAAGTTCATAGAATCACATACCAAAAGGTTCAATGAGTTCAGACATTAGAGCAGGTAAAGCTTGGTTGAATCAGCTGTAAACAATTGCAGTGTAAGTTACGTAAACTCTTCATTCCAAACTAGTGTGTCTAATTCTAAGTTCTAACCATCCCACACCCGAGTGTAATATGACACTAGGATCACTTTGATTAGACCAGAATCTCAGAAAAAAGAACGAGAAAGCCTAGGAAATAGACGTTTTCTACCTGTACACAACTACTATTCTGTTCTTGATTCAAATCCAAGTTGTACATATCACACTTCAATCAGATTTCATCAGTCAGAGTATAGAGCTACTTTAACTCTTTATAACTAGAACAACCAGCCCC TTGTCTCCTCACCACAATGCAATATCCCAACACCCATTAGCTGTTTTATATTGTGCCCATAAACAAAGGTAAACAAAAAAGGAAACCCCTTAACCATAAACTAAACCCCACCAAAGACTAAACAAATCAAATAAAACTGCTTGGTGTTTGGGTTCATCATCTAAGGTCATCCCCACCGATCGTTCTGATCAAACGGTCCACACGAGGCGCGTGGGCCCGGGGCCGCGGCTCGGGATAGCTTTTTTCTTGTGTGTGTGGATGGGCCAATAAAATAATTCCCTTGTATATTGCACACAGAAAGCAGAATAAATTCCGACTTAGATGTGTGTTTTATTCTGTCTCCTTTACCTAATCAATCCTGTTTATATAATAGTATTCCTTTACCTTCTTCCTATCTCCTCACCACAACTCAGCATATTTCTCATTCTCTCAAGTTTCTTTCTGATCATCAACAACAAAGGTTTCAACAAGCTGTTATATATTCAAATTGATCAAACTGTTTCAACAACCAAAATCAGAGTTTTTGTAACAAGGATTGATTTTTAAGTTTAAGGGAATATCATCAATCAAGAAACAACAATGGCAAGGTCTGAGACATACGAAAACGATCTTCATCTTGAAGCAACTGAGCTAAGATTAGGATTACCTGGTAGCAAAGAGCCACAATCAACTTCTAATAATGTGGCAAGAAGTAACAAGAGATCATCACCTGATCAACTGCATGAGGATTCCTCTTCAACAAACAATTCCAGTGTTTCTGATGCTAGAAATGAAGATTGCCCCCCTCCTTCCAAGGCACAAATTGTTGGATGGCCACCAATCAGATCATACAGGAAGAACACCCTCCAACCCAAGAAGACAGAGTCTGATGTTTCTGGGATGTATGTGAAAGTAAGCATGGATGGAGCACCATACCTGAGGAAGATTGACCTGAAGTTGTACCAGAGTTATACAGAACTGTTGAAGGCCTTAGAAAGTATGTTCAGGATCTGTATCGGCCAATACTCCGAAAGAGACGGATACAACGGTTCTGATGTTGCACCTACCTATGAAGACAAAGATGGTGACTGGATGCTGGTTGGAGATGTACCATGGGAGATGTTCAACACTTCCTGCAAAAGGCTTCGAATCATGAAGTCTTCAGAAGCAAAGGGACTTGGGTGTCTATGAGAAAAAGAGAGAAATTCCTGTCAAAGGTGCTAAAATTCAACATAGATCAGCAGATAATCCAAGCAATGAAAAAGCTTCTGTTTTGGTTTAGGAATACATACAGAGAATTGTCAGATCAGAAAAATTTTCACTTTCTTTTTTTCATTTTGTGTTCTTTTTTGGTTTCTTGTGACGTTCTTGGATGGTTTTGAGTTTCATTCTGGTTTTGCAGCAACAAACTGATAACAAAAGTCAAAACCCCTGTACTTTCTTATACTTTGGATATATATGTATTCGCCTGAGATTCAATTGTACAAATGCAGAAAAAATAGATTTGACAGAGAAAAAAGCCAAAAGTAACAATAACATTGTTGACAATACATATACACTTATGTTCTAGAGTGTTCCCCCCATTTCCTCTGTCAATACTTCTGCAGATATCCTCAGAATTTACTTTCATAGTCAGGATATGACATCAATCAGCCTCTCTGATGATCATATATTACAAAAACGATTTCTCCAATTTAAGACCCAGAACTTGGAAATTTTAGAAGTTCAAAAAAATTAAAGCAACCATATCATGTATGACTAAACAGGTATCTCACTCTACAAGATACTACATTATCTCTCAGCAAAAGGAATCATAGGATTGGGAATATTTAGCTACAATTAGCCACAACCAAGAAATACTTGGGAGAAAGTTCATAGAATCACATACCAAAAGGTTCAATGAGTTCAGACATTAGAGCAGGTAAAGCTTGGTTGAATCAGCTGTAAACAATTGCAGTGTAAGTTACGTAAACTCTTCATTCCAAACTAGTGTGTCTAATTCTAAGTTCTAACCATCCCACACCCGAGTGTAATATGACACTAGGATCACTTTGATTAGACCAGAATCTCAGAAAAAAGAACGAGAAAGCCTAGGAAATAGACGTTTTCTACCTGTACACAACTACTATTCTGTTCTTGATTCAAATCCAAGTTGTACATATCACACTTCAATCAGATTTCATCAGTCAGAGTATAGAGCTACTTTAACTCTTTATAACTAGAACAACCAGCCCC ATGGCAAGGTCTGAGACATACGAAAACGATCTTCATCTTGAAGCAACTGAGCTAAGATTAGGATTACCTGGTAGCAAAGAGCCACAATCAACTTCTAATAATGTGGCAAGAAGTAACAAGAGATCATCACCTGATCAACTGCATGAGGATTCCTCTTCAACAAACAATTCCAGTGTTTCTGATGCTAGAAATGAAGATTGCCCCCCTCCTTCCAAGGCACAAATTGTTGGATGGCCACCAATCAGATCATACAGGAAGAACACCCTCCAACCCAAGAAGACAGAGTCTGATGTTTCTGGGATGTATGTGAAAGTAAGCATGGATGGAGCACCATACCTGAGGAAGATTGACCTGAAGTTGTACCAGAGTTATACAGAACTGTTGAAGGCCTTAGAAAGTATGTTCAGGATCTGTATCGGCCAATACTCCGAAAGAGACGGATACAACGGTTCTGATGTTGCACCTACCTATGAAGACAAAGATGGTGACTGGATGCTGGTTGGAGATGTACCATGGGAGATGTTCAACACTTCCTGCAAAAGGCTTCGAATCATGAAGTCTTCAGAAGCAAAGGGACTTGGGTGTCTATGA MARSETYENDLHLEATELRLGLPGSKEPQSTSNNVARSNKRSSPDQLHEDSSSTNNSSVSDARNEDCPPPSKAQIVGWPPIRSYRKNTLQPKKTESDVSGMYVKVSMDGAPYLRKIDLKLYQSYTELLKALESMFRICIGQYSERDGYNGSDVAPTYEDKDGDWMLVGDVPWEMFNTSCKRLRIMKSSEAKGLGCL Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo02371.1 vs. NCBI nr
Match: gi|902188413|gb|KNA11147.1| (hypothetical protein SOVF_138030 [Spinacia oleracea]) HSP 1 Score: 397.9 bits (1021), Expect = 1.000e-107 Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1
BLAST of Spo02371.1 vs. NCBI nr
Match: gi|731336269|ref|XP_010679164.1| (PREDICTED: auxin-induced protein 22D [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 371.7 bits (953), Expect = 7.900e-100 Identity = 185/198 (93.43%), Postives = 188/198 (94.95%), Query Frame = 1
BLAST of Spo02371.1 vs. NCBI nr
Match: gi|720071799|ref|XP_010278166.1| (PREDICTED: auxin-responsive protein IAA4-like [Nelumbo nucifera]) HSP 1 Score: 271.9 bits (694), Expect = 8.500e-70 Identity = 136/196 (69.39%), Postives = 161/196 (82.14%), Query Frame = 1
BLAST of Spo02371.1 vs. NCBI nr
Match: gi|590642621|ref|XP_007030568.1| (AUX/IAA transcriptional regulator family protein isoform 1 [Theobroma cacao]) HSP 1 Score: 271.6 bits (693), Expect = 1.100e-69 Identity = 132/192 (68.75%), Postives = 165/192 (85.94%), Query Frame = 1
BLAST of Spo02371.1 vs. NCBI nr
Match: gi|590716515|ref|XP_007050424.1| (AUX/IAA transcriptional regulator family protein [Theobroma cacao]) HSP 1 Score: 268.1 bits (684), Expect = 1.200e-68 Identity = 134/199 (67.34%), Postives = 161/199 (80.90%), Query Frame = 1
BLAST of Spo02371.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QV49_SPIOL (Auxin-responsive protein OS=Spinacia oleracea GN=SOVF_138030 PE=3 SV=1) HSP 1 Score: 397.9 bits (1021), Expect = 7.200e-108 Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1
BLAST of Spo02371.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CDG7_BETVU (Auxin-responsive protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g120300 PE=3 SV=1) HSP 1 Score: 371.7 bits (953), Expect = 5.500e-100 Identity = 185/198 (93.43%), Postives = 188/198 (94.95%), Query Frame = 1
BLAST of Spo02371.1 vs. UniProtKB/TrEMBL
Match: A0A061F147_THECC (Auxin-responsive protein OS=Theobroma cacao GN=TCM_026344 PE=3 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 7.700e-70 Identity = 132/192 (68.75%), Postives = 165/192 (85.94%), Query Frame = 1
BLAST of Spo02371.1 vs. UniProtKB/TrEMBL
Match: A0A061DR55_THECC (Auxin-responsive protein OS=Theobroma cacao GN=TCM_004214 PE=3 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 8.600e-69 Identity = 134/199 (67.34%), Postives = 161/199 (80.90%), Query Frame = 1
BLAST of Spo02371.1 vs. UniProtKB/TrEMBL
Match: B9GS71_POPTR (Auxin-responsive protein OS=Populus trichocarpa GN=POPTR_0002s04590g PE=3 SV=2) HSP 1 Score: 265.8 bits (678), Expect = 4.200e-68 Identity = 135/199 (67.84%), Postives = 160/199 (80.40%), Query Frame = 1
BLAST of Spo02371.1 vs. ExPASy Swiss-Prot
Match: AX22D_VIGRR (Auxin-induced protein 22D OS=Vigna radiata var. radiata GN=AUX22D PE=2 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 7.900e-68 Identity = 133/191 (69.63%), Postives = 158/191 (82.72%), Query Frame = 1
BLAST of Spo02371.1 vs. ExPASy Swiss-Prot
Match: AX22E_VIGRR (Auxin-induced protein 22E OS=Vigna radiata var. radiata GN=AUX22E PE=2 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 1.300e-65 Identity = 132/201 (65.67%), Postives = 155/201 (77.11%), Query Frame = 1
BLAST of Spo02371.1 vs. ExPASy Swiss-Prot
Match: IAA4_ARATH (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana GN=IAA4 PE=1 SV=2) HSP 1 Score: 235.0 bits (598), Expect = 7.200e-61 Identity = 116/195 (59.49%), Postives = 144/195 (73.85%), Query Frame = 1
BLAST of Spo02371.1 vs. ExPASy Swiss-Prot
Match: AX22B_VIGRR (Auxin-induced protein 22B OS=Vigna radiata var. radiata GN=AUX22B PE=2 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 8.000e-60 Identity = 117/193 (60.62%), Postives = 147/193 (76.17%), Query Frame = 1
BLAST of Spo02371.1 vs. ExPASy Swiss-Prot
Match: IAA4_PEA (Auxin-induced protein IAA4 OS=Pisum sativum GN=IAA4/5 PE=1 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 2.000e-58 Identity = 118/193 (61.14%), Postives = 145/193 (75.13%), Query Frame = 1
BLAST of Spo02371.1 vs. TAIR (Arabidopsis)
Match: AT5G43700.1 (AUX/IAA transcriptional regulator family protein) HSP 1 Score: 235.0 bits (598), Expect = 4.100e-62 Identity = 116/195 (59.49%), Postives = 144/195 (73.85%), Query Frame = 1
BLAST of Spo02371.1 vs. TAIR (Arabidopsis)
Match: AT1G04240.1 (AUX/IAA transcriptional regulator family protein) HSP 1 Score: 224.2 bits (570), Expect = 7.200e-59 Identity = 119/193 (61.66%), Postives = 138/193 (71.50%), Query Frame = 1
BLAST of Spo02371.1 vs. TAIR (Arabidopsis)
Match: AT4G14560.1 (indole-3-acetic acid inducible) HSP 1 Score: 208.0 bits (528), Expect = 5.300e-54 Identity = 106/182 (58.24%), Postives = 129/182 (70.88%), Query Frame = 1
BLAST of Spo02371.1 vs. TAIR (Arabidopsis)
Match: AT3G23030.1 (indole-3-acetic acid inducible 2) HSP 1 Score: 193.4 bits (490), Expect = 1.400e-49 Identity = 104/187 (55.61%), Postives = 128/187 (68.45%), Query Frame = 1
BLAST of Spo02371.1 vs. TAIR (Arabidopsis)
Match: AT3G04730.1 (indoleacetic acid-induced protein 16) HSP 1 Score: 168.7 bits (426), Expect = 3.600e-42 Identity = 107/223 (47.98%), Postives = 130/223 (58.30%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo02371.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo02371.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo02371.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo02371.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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