Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCATTTGTTTTTATCTATAAAAAGGGGAAGAAACTCCGAAAACCATGATTTGGATTTAGAAAAGAGATTACTGAGTTACTGACGTACAGCTACAAATAAAACCCATCACGCAATACTCTGCAAATTGCAAAAACCCCCCATATTCCTTTTAACACACTCACTCTCCTTCATCTTCAACAACAAACAAAATAACAACTTCTCCCCAAAAATACATCATCTCCCTTAAAACTCGGAACATAAAGATAGGATCATCAACAACAACAATCCACCATTTTATTTTTATTTTATTCTATTTTTTCATTTTATCAACAAGAGCACACAACCTTAGTTTCATATTCCCAGGTTAGTTCTTTCAATTCAAATGTTATTGCTCAATTCAAATGTTGTGCATTCTCATTGTCGGAAAGACTAATTATAAAGCTTCAATCTTTGCCTACATTTTGTTGATTTCATATTTATTTGTGTAATCTGGTTTATTTGTTTGCATGGTAAGAGTTAAAGTTGCATTCTTTTTTCTCCGAATAAAAATTGGAATACAGTGTATGAAATCTAAACGTTGATGGGTTTATCTGGGTTCTTTAAGGTGATCAATCAACTTTTGGTGCCACTACTGTAGTACTATAATTCTATCAATTACTAATTTCACTAATTGAAGGAGTATCAAAAGATTGAAACCAGTGTTGCCAGAATAAATTGATGAAATTTGCACCCAACTATTGGAAAGAAAATTAAAGAAATTGCTGAAGAGATCAAATCTTTGTGCTTTTTAATGCATTTTCTGACTTTCTTTCTTAAAAATGTAGATGGGTTTTTTGTCTGGTTAGTTTAATGTCCCATTTGATCAGTTCTTGTTTCCTTGATCAATTTTTGTTCCCTTGATTCACTGCTTTTTATTTTGGTTTATCTGGGTTCTTTAACTGGGTGATTAATGATAATTATCCAATTAATTGCTAATTATATTTCAAACAATTTTGCCAAATAAATTGTTGAAATTGCAACCACAACAAAAAGAAATTACTGTAAAGCTCAAATCTTTGTGCTTTACTGCCTTTTAATGGAAATTTTCACAATATTTTTTTTCTTAAAAAAGAAATGCAAATGGGATTTTCTGGGTTTCCCCCCCTAATAAATCACCCATTTGATCAATTTTTGTTCCCTTGATTTACTTCTAATTTTGTTGTTCTGGGTGTTTTTTTTCCAAAAATACTCAATTTCTGGTAAATTTTCTTGTTGTTTCTGGGTTTGCTTCCTTGTTTGAGGCGGTTTGTTTGATCAATTGTTTTGCTTAATTTTTGCCGCCTAGTGTCACATTCATTCACGCAACACCAAACGTTTCTTTTAATTTATTTTCTATCTTATTTTTTGTTTTTTGGGAAATTTATCAAACTGATAAGAGCTTTAGCTTTTCATTTTAGTCTAATTTAGTGTTTTCAATCCAAAAAGCACGAGAATTTAGTTAAGCATTGATAGTTTAATCAGTTTATAATTACTTGTTGCAATAAACAACATTCTAGTTGTCATCAATTATATCTTTTCAAACCCTTTGACTATTTAATTCGATTTAAAATCTGCAATTTGTTTCCAAATTGAGATCATTTACTTTGGCAACATCTGAAATGAGTTTGGTGAACGATTATGTAAGCTACAATTAATTATGTGTTGAGGGGATTCAGGACGATGTTGCTTATGCTGGCCTTTCGCTTTCAATTGCAATTTTCAATAACATGAAAACAACATGCCTGATTTTATAACATAGTTCAATCTCATCTAGTTGTTGAAGAGTTGAATTAAATTAGCTAATTTTGCTAACCGTTAAAATCGATTTATCGTCTTGCAGCTTATCCATTGGTGCTTCATTGAACTGATATATGCTCGTATTCGTTTCCGTGTTTTATAAAACTAGTGGTAGTGATACAACTATAACAACATTACATTACACTGGATCTTTTTGTAGACAGTTGCACAGACGGATTTGGATTTTGACTACTTTGTCTGTAAATTTTAGATTTTTCTTTGCCTTTCTGTAAGCCATAATCCAATACCCCACATAAAAGGCGTTGATCTAATGTTGACAAGACGGAAAAGTTGACTGTAATAGTTGTATCTGTTTGTCATTATTTACATTTAGCAGACATATTACTATATTAGGAATGTTAATTGTTGCTGTTCTTGCTATGAAGTTGCTGGGTTTAATGGTGTGTACTGTGTTGTGCTAAGAAAGCAGCCTAGTGGTGTGTGTGCGCGCGCGCACGCGTGAGTTTCCATTTGTGTGTTGATTGATTAAGGCTCTTCTCTCAGATTTTGGAATACCTTCCAACTGAATATTGTACAATTTCAAACTTTCAATGCTCTTATTTGACATGAATGATGCTGAAGTTCTATGAAATTTTATACTGCTGCCGATGCATTTACTATACTAATATTTACTGCTAATCTGCATTTTCTAAAAACATTTTCATGGAGAAAACCTGTGTTTTTGAAGCGGTGATGCACATTGACATTCGTTTAGGTGGATAATTGCATCATTCTGTCATGTTTTCGGTTGATTATTGATTCTATTATCAATAGTTAGCAACTTAGCATTGCTATGTGCTGAAAGCGTTCAAATTAGTACTGCATTTACAAAACTAATTCTAAGCATCTTGTTAATAATATTGCAGATTTATTTTCGGGTTAACACAAGTTGCTGAGCTTGAAAAGCAGAGGAAACAGCTAGTGAGTAAAGTTATCCTTGCTTTTATATATGGGCTGTTGCCACTCAAAGAAAGTTGGGCGTACTCCTGGATACGAGGATCCTATTACCCTTGCCTCAGAAACACCATGTGAGTGTTCGTAATATTTCAAAATTTTGCATATTTTTCAGTACCATTTACCTTTCATATTTCAGTGATAATTTCTTTGTTCATAGTAACGCTTAGTCGCTTACCAATTAGAAATACGTTTGTACGTTTAATTTGCAGTCACAGAGAGTGAAGTGGAGGCCTTGTATGAGCTATTCAAGAAATTAAGCAGTTCCATAATTAATGACGGCCTGATTCACAGGGTAAGCGTTTTTATTAACCTTCTAAGTGGATTAGAAATGTCTCATTTTCTTGCTTAATCCATAACTAATGACGGGCGTATCATTATTTTCTTTTAATTGAACAGGAAGAGTTCCAACTTGCACTCTTCAGGAACTGCAAAAAGCAGAATCTCTTTGCAGATAGGGTGAGTAGGCTGCTTCTTTTTGATCCTGTCACCAAATTGGAAGGTTTTCTTGTTTAACCTGAACAATGTCTATGTATTTGGTTTTCTGCAGATCTTTGACTTATTTGATTTGAAACGCAATGGTGTTATCGACTTTGGAGAATTTGTTCGGTCACTGGGAGTATTCCACCCAAATGCACCTGTACATCATAAGATTGAATGTATGTACCTCTTTGATTATGTCTGCAATTAAGCATGTGTAACAATTTTCATCAGACACTCTACATTTATATTTAACGGAAATAATATTTGCCTGCAGTTGCTTTCAAACTGTATGATCTGAGACAAACTGGGTTTATTGAACGAGAAGAGGTGCGTACTCATAACTTTCATCACTTAGAACTTGAATTTCCAAGCATTAGCCATTTATTTACCTGGATTTTACCCTGCGTGGTTAACTGACAGTCATTCACTTGAATGCAGTTGAAGGAGATGGTTGTGGCTCTTTTACATGAATCAGAATTGGTCCTCGCGGATGATGTTGTTGAGGCAATTGTGGATAAGGTATAGCAAAGTTTTTTCCTATAAGGGCTTGTTTGGTTGGCGTGGAAATTTATTTCCCATAGAAAGATGTAATTCAAGGGAAATTACTTCCCTTGTTTCCTTAAGTTGTTTGGTTGACAACATGGGAATTAGAAATTCGTATGAATTTTGATTGACCAACGAGGGCTATGTTTTGTAGGAATTCTAACTTCTTCCATTTTTACTTTTTTTATATCAACCAAACAACTACTATATCTATGAATTCCCATGAATTTTCACTTCCCCCATTTTTAGTTGTCAACCAAACAACCCCCAAGTACTTTTGCTTCTAATTGGTTCTTCTTTGCACATTGACATCTTTTTTTTTTGTGTGTGTGTGTGTCACACATTTACATTTTTGGTTGTTCTGTATGTGCAGACATTTACTGAAGCAGATCTAAAAGGTGACGGGAAGATAGACCAAGAAGAATGGGATGAATTAGTGAAGAAGTATCCCGCGTTGCTAAAGAATATGACACTCCCATATTTAAAGTACGTAACTTTTACCTCTGAAATTCTTCCTTTTTTTGTGATTTTTCCGTATCATCAAACAAGGTTCATTAGTATTTGCAGAATGATTCATCTTAAACATCGGTTTTTTTCAGGGATATTACATTAGCATTTCCGAGCTTCATTTTAACCTCAGAAGTTGAAGACATAGAAGTGGCAATGACATGAAAGAGTACAATTTAAGGGTTGTTGATGAAAAGGCATTCTTTGCCAGTTTAGGAATTACCTTGGGAGTTCAACTTTCCTTCAGCATTTCCTCTGAATTTTGAGAACCGTTCCAGCGCCGTGGCAAGGCTGAACTGTCTCACAATATGAAGAACCAGACGAGATCGGATGGTATTTTGGGGTGGACCTCATTATGCAGCGACACTAGTGTCTCATCGCCTGCGTGCTAAGAAAAAGAAGAGTGAAAAAGATATCAACTTGGAAGTGTTTAGGTGTAGAACTAGAGAGTGACTTTAGAGGTAGGTATATTAAGTGTTAGTTATGTATAGAATTAGACTTGAAAAACAGGAACTGAAAAGTGTGTGTTTTTGTGCAACTTGAGTTTCCTGCATGAAAATCTGTACTGCCACTCTGCCAGTAACTATTTTCTTTCATTTTGATCTTTCATAAATCGAGT CCATTTGTTTTTATCTATAAAAAGGGGAAGAAACTCCGAAAACCATGATTTGGATTTAGAAAAGAGATTACTGAGTTACTGACGTACAGCTACAAATAAAACCCATCACGCAATACTCTGCAAATTGCAAAAACCCCCCATATTCCTTTTAACACACTCACTCTCCTTCATCTTCAACAACAAACAAAATAACAACTTCTCCCCAAAAATACATCATCTCCCTTAAAACTCGGAACATAAAGATAGGATCATCAACAACAACAATCCACCATTTTATTTTTATTTTATTCTATTTTTTCATTTTATCAACAAGAGCACACAACCTTAGTTTCATATTCCCAGATTTATTTTCGGGTTAACACAAGTTGCTGAGCTTGAAAAGCAGAGGAAACAGCTAGTGAGTAAAGTTATCCTTGCTTTTATATATGGGCTGTTGCCACTCAAAGAAAGTTGGGCGTACTCCTGGATACGAGGATCCTATTACCCTTGCCTCAGAAACACCATTCACAGAGAGTGAAGTGGAGGCCTTGTATGAGCTATTCAAGAAATTAAGCAGTTCCATAATTAATGACGGCCTGATTCACAGGGAAGAGTTCCAACTTGCACTCTTCAGGAACTGCAAAAAGCAGAATCTCTTTGCAGATAGGATCTTTGACTTATTTGATTTGAAACGCAATGGTGTTATCGACTTTGGAGAATTTGTTCGGTCACTGGGAGTATTCCACCCAAATGCACCTGTACATCATAAGATTGAATTTGCTTTCAAACTGTATGATCTGAGACAAACTGGGTTTATTGAACGAGAAGAGTTGAAGGAGATGGTTGTGGCTCTTTTACATGAATCAGAATTGGTCCTCGCGGATGATGTTGTTGAGGCAATTGTGGATAAGACATTTACTGAAGCAGATCTAAAAGGTGACGGGAAGATAGACCAAGAAGAATGGGATGAATTAGTGAAGAAGTATCCCGCGTTGCTAAAGAATATGACACTCCCATATTTAAAGGATATTACATTAGCATTTCCGAGCTTCATTTTAACCTCAGAAGTTGAAGACATAGAAGTGGCAATGACATGAAAGAGTACAATTTAAGGGTTGTTGATGAAAAGGCATTCTTTGCCAGTTTAGGAATTACCTTGGGAGTTCAACTTTCCTTCAGCATTTCCTCTGAATTTTGAGAACCGTTCCAGCGCCGTGGCAAGGCTGAACTGTCTCACAATATGAAGAACCAGACGAGATCGGATGGTATTTTGGGGTGGACCTCATTATGCAGCGACACTAGTGTCTCATCGCCTGCGTGCTAAGAAAAAGAAGAGTGAAAAAGATATCAACTTGGAAGTGTTTAGGTGTAGAACTAGAGAGTGACTTTAGAGGTAGGTATATTAAGTGTTAGTTATGTATAGAATTAGACTTGAAAAACAGGAACTGAAAAGTGTGTGTTTTTGTGCAACTTGAGTTTCCTGCATGAAAATCTGTACTGCCACTCTGCCAGTAACTATTTTCTTTCATTTTGATCTTTCATAAATCGAGT ATGGGCTGTTGCCACTCAAAGAAAGTTGGGCGTACTCCTGGATACGAGGATCCTATTACCCTTGCCTCAGAAACACCATTCACAGAGAGTGAAGTGGAGGCCTTGTATGAGCTATTCAAGAAATTAAGCAGTTCCATAATTAATGACGGCCTGATTCACAGGGAAGAGTTCCAACTTGCACTCTTCAGGAACTGCAAAAAGCAGAATCTCTTTGCAGATAGGATCTTTGACTTATTTGATTTGAAACGCAATGGTGTTATCGACTTTGGAGAATTTGTTCGGTCACTGGGAGTATTCCACCCAAATGCACCTGTACATCATAAGATTGAATTTGCTTTCAAACTGTATGATCTGAGACAAACTGGGTTTATTGAACGAGAAGAGTTGAAGGAGATGGTTGTGGCTCTTTTACATGAATCAGAATTGGTCCTCGCGGATGATGTTGTTGAGGCAATTGTGGATAAGACATTTACTGAAGCAGATCTAAAAGGTGACGGGAAGATAGACCAAGAAGAATGGGATGAATTAGTGAAGAAGTATCCCGCGTTGCTAAAGAATATGACACTCCCATATTTAAAGGATATTACATTAGCATTTCCGAGCTTCATTTTAACCTCAGAAGTTGAAGACATAGAAGTGGCAATGACATGA MGCCHSKKVGRTPGYEDPITLASETPFTESEVEALYELFKKLSSSIINDGLIHREEFQLALFRNCKKQNLFADRIFDLFDLKRNGVIDFGEFVRSLGVFHPNAPVHHKIEFAFKLYDLRQTGFIEREELKEMVVALLHESELVLADDVVEAIVDKTFTEADLKGDGKIDQEEWDELVKKYPALLKNMTLPYLKDITLAFPSFILTSEVEDIEVAMT Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo02501.1 vs. NCBI nr
Match: gi|902196610|gb|KNA13146.1| (hypothetical protein SOVF_119390 [Spinacia oleracea]) HSP 1 Score: 429.9 bits (1104), Expect = 2.700e-117 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 1
BLAST of Spo02501.1 vs. NCBI nr
Match: gi|731321606|ref|XP_010671443.1| (PREDICTED: calcineurin B-like protein 7 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 388.7 bits (997), Expect = 6.900e-105 Identity = 192/216 (88.89%), Postives = 207/216 (95.83%), Query Frame = 1
BLAST of Spo02501.1 vs. NCBI nr
Match: gi|224120808|ref|XP_002318422.1| (hypothetical protein POPTR_0012s02230g [Populus trichocarpa]) HSP 1 Score: 345.5 bits (885), Expect = 6.700e-92 Identity = 169/213 (79.34%), Postives = 192/213 (90.14%), Query Frame = 1
BLAST of Spo02501.1 vs. NCBI nr
Match: gi|747059240|ref|XP_011075992.1| (PREDICTED: calcineurin B-like protein 4 [Sesamum indicum]) HSP 1 Score: 344.4 bits (882), Expect = 1.500e-91 Identity = 171/213 (80.28%), Postives = 189/213 (88.73%), Query Frame = 1
BLAST of Spo02501.1 vs. NCBI nr
Match: gi|703114829|ref|XP_010100753.1| (Calcineurin B-like protein 7 [Morus notabilis]) HSP 1 Score: 343.2 bits (879), Expect = 3.300e-91 Identity = 168/213 (78.87%), Postives = 192/213 (90.14%), Query Frame = 1
BLAST of Spo02501.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R0W3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_119390 PE=4 SV=1) HSP 1 Score: 429.9 bits (1104), Expect = 1.900e-117 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 1
BLAST of Spo02501.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CQK6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g051930 PE=4 SV=1) HSP 1 Score: 388.7 bits (997), Expect = 4.800e-105 Identity = 192/216 (88.89%), Postives = 207/216 (95.83%), Query Frame = 1
BLAST of Spo02501.1 vs. UniProtKB/TrEMBL
Match: A4ZKI5_POPTR (Calcineurin B-like protein 4-1 OS=Populus trichocarpa GN=CBL4 PE=4 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 4.600e-92 Identity = 169/213 (79.34%), Postives = 192/213 (90.14%), Query Frame = 1
BLAST of Spo02501.1 vs. UniProtKB/TrEMBL
Match: W9RDS5_9ROSA (Calcineurin B-like protein 7 OS=Morus notabilis GN=L484_006815 PE=4 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 2.300e-91 Identity = 168/213 (78.87%), Postives = 192/213 (90.14%), Query Frame = 1
BLAST of Spo02501.1 vs. UniProtKB/TrEMBL
Match: A0A059DEF8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01457 PE=4 SV=1) HSP 1 Score: 339.0 bits (868), Expect = 4.300e-90 Identity = 169/213 (79.34%), Postives = 190/213 (89.20%), Query Frame = 1
BLAST of Spo02501.1 vs. ExPASy Swiss-Prot
Match: CNBL4_ARATH (Calcineurin B-like protein 4 OS=Arabidopsis thaliana GN=CBL4 PE=1 SV=3) HSP 1 Score: 313.9 bits (803), Expect = 1.300e-84 Identity = 158/217 (72.81%), Postives = 183/217 (84.33%), Query Frame = 1
BLAST of Spo02501.1 vs. ExPASy Swiss-Prot
Match: CNBL7_ORYSJ (Calcineurin B-like protein 7 OS=Oryza sativa subsp. japonica GN=CBL7 PE=2 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 3.400e-80 Identity = 150/213 (70.42%), Postives = 173/213 (81.22%), Query Frame = 1
BLAST of Spo02501.1 vs. ExPASy Swiss-Prot
Match: CNBL4_ORYSJ (Calcineurin B-like protein 4 OS=Oryza sativa subsp. japonica GN=CBL4 PE=1 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 9.300e-78 Identity = 144/210 (68.57%), Postives = 172/210 (81.90%), Query Frame = 1
BLAST of Spo02501.1 vs. ExPASy Swiss-Prot
Match: CNBL8_ORYSJ (Calcineurin B-like protein 8 OS=Oryza sativa subsp. japonica GN=CBL8 PE=2 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 7.900e-77 Identity = 147/213 (69.01%), Postives = 170/213 (79.81%), Query Frame = 1
BLAST of Spo02501.1 vs. ExPASy Swiss-Prot
Match: CNBL1_ORYSJ (Calcineurin B-like protein 1 OS=Oryza sativa subsp. japonica GN=CBL1 PE=2 SV=2) HSP 1 Score: 280.8 bits (717), Expect = 1.300e-74 Identity = 133/211 (63.03%), Postives = 174/211 (82.46%), Query Frame = 1
BLAST of Spo02501.1 vs. TAIR (Arabidopsis)
Match: AT5G24270.1 (Calcium-binding EF-hand family protein) HSP 1 Score: 313.9 bits (803), Expect = 7.600e-86 Identity = 158/217 (72.81%), Postives = 183/217 (84.33%), Query Frame = 1
BLAST of Spo02501.1 vs. TAIR (Arabidopsis)
Match: AT5G47100.1 (calcineurin B-like protein 9) HSP 1 Score: 277.7 bits (709), Expect = 6.000e-75 Identity = 135/211 (63.98%), Postives = 171/211 (81.04%), Query Frame = 1
BLAST of Spo02501.1 vs. TAIR (Arabidopsis)
Match: AT4G17615.1 (calcineurin B-like protein 1) HSP 1 Score: 276.2 bits (705), Expect = 1.800e-74 Identity = 132/211 (62.56%), Postives = 174/211 (82.46%), Query Frame = 1
BLAST of Spo02501.1 vs. TAIR (Arabidopsis)
Match: AT1G64480.1 (calcineurin B-like protein 8) HSP 1 Score: 276.2 bits (705), Expect = 1.800e-74 Identity = 140/208 (67.31%), Postives = 167/208 (80.29%), Query Frame = 1
BLAST of Spo02501.1 vs. TAIR (Arabidopsis)
Match: AT5G55990.1 (calcineurin B-like protein 2) HSP 1 Score: 263.1 bits (671), Expect = 1.500e-70 Identity = 130/210 (61.90%), Postives = 165/210 (78.57%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo02501.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo02501.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo02501.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo02501.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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