Spo02595.1 (mRNA) | SpinachBase

Overview


Name	Spo02595.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Thylakoid lumenal 17.4 kDa protein
Location	chr3 : 6212114 .. 6216303 (-)
Sequence length	1182

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCATTTATTATCAAGTTTGAGGGGGAAAAGATCTTCTTATAATAAATAAAAAAAAAAGAAAAAGAAAAGAAGTTTGAGTGCCACGTAAGAAGATAAGCTGCCCAAGGAGGGAGGAAGAAGGGAGAGAGAAAAAGATAGGAAATGCAAATGATAAACATAATTTGACAAAATGGCGAGTATTGGCATTTCCATTCACCCAAATGGCATCTCCTTGAAAAATTCCTCTGTTAAACGCCATCTTTTTTCTGCTCGAAAACTTCAGTTATCTTTCCCAATCAACTGCTCTGGTACACACTCTTTCTCTCTCACTCACTCTTGTTTATCATTAACTAGAAATTTCAATGGAAATCTAAATTATTGTTGATAATGCTGTTGTTTTGTTGCTTTAATTGAACTTGAAATTCTCATCTTTAGCTCATTTGCAATTGAATTAGCATTCAAGAACAGCTTCTATAGAGGCCAATTCAATTAGTAATGACTTGTGGTGTGTTCATTTGGTTTGCGGGTAACAATACCCATCACTGATTTCTTAGTTCTTACAGATGGTTTAATTTGTGACATTTGTCATTACAAATTGCTATTTTCTGTACTTGTTTTTTTGATTGATCATAAACCATTTATCTGTAGTTCATTATTTCTAGAACAAGGGTGTTGTTGTCTATAATGGGGCGTCACAACTCACAACTCACAAGGTAGTCTTGCACATGTAATACCTAATTAATCTCATATTCCAACAGTAAAAAAGATCATTAATTTTAGACTTTTGAATTTTGATGGACTTAAATTAAGCGGTTGAATAAATTGCTTGTGAGTAGTGATAAATTAAGGGTGTCCGGGAAAAAATGGTCACATTCTCTCAATGAATAATGAAGTAATGAGTGAGGTGGGAGAAGCACCATAATGACAGAGGGCTTTTGTTTCTCTATTGCAAATTCATGTTTAAATTCTTAATTATGACGAGTTAGGGAACATGGGACAACTATGTTGAAGCGGGGAGAGTATGAAGTAACAAACAATCATTGCATACATGAATACTTGATGCATCTTACCTTAGTGGCAACCAAGCTAAGTGTCACTTGAATAATACCTCTCTTTCATGTTAAAGTAAAGTTGTTTATTTAGTCTAATCCTCCTTGATTACCTTAACCGAGGCAGGAGATTCTTTACAGATATTGAGAAACATTGAGGTTAGTTTATGTTGGTTCTTTAAAACATTTTCTAAGCAAGGTGTTGTGTTGAAATCTATTTCTTGTTATTGTCAGTTTTCTTAGGAAGAGATGTTTATTTCGAAAACTTTGTTCTGCTGTGTTCGCCAAAATGCCTACATTTTTGGAGTCACAGTTGATAATGGGGATCCTTTGACACGCTATTAGAACATGTTTGATCCCTCAACTGATCATTTTATCCCATCTTATACCGATTTAACAAATGCTTTAAATAATGCATGTGTATGCTTCTTGATGATATACCTACTCAATGTTGTATCACTGAACATAGATATTGTCCTGTCCTTGAACGAGTTGAACCTTGTTTTTCTGGTTCTGTTTCTGTTACCAAAGTTTGTGTACTGCTTGTGCTTTGTAGTTTTCTTGTTCTTCATCCTGGACTAACTCTGATGTTTAAGTCGAACTATAAATGTTGTCTTTTTGTAGCTGTTGGGAATGGATTGGAGAAAGAAAACTCGTCTCAATTCAAAGAACTTAGGAATGTTGCATTTGGCCTCCTGGCCACGTTGGCAGTCACAGCTGCCTCGCCTGTAATAGCTGCTAACCAGGTCAGGAATTTGCCGTTGTTACAGTTCAATTGCAGATTCGTCTAAAACAATTTAGAATTTCGTAATCTGTTCGCATGCTTCAAAGTTTTGTAGATACATCTACTACATCAGATTATCCATGTGAAGTGATTTACAGTTTCTTAGACATAACTAGCTGGAAAAAAAAATGCATTTCATGATGATCTACTAACCAAATAGGTTACTACCTTGTGCTAAGAAATCTCAAGTTTCATGATTGTCGTGATGAAAACCAAATCAGCTTCAAATGTGACTTATCATTGTTCACATTTGAGTTTTGACTCTGTCTACATCTCCATTCCCTAAGGGCTCAAAACGATATGCTTCCTCTATGTTCTTTAATTCTACAGTCTAGACTACATAGCTGCTGAGTGCTCACCTACTAGGTGATCTTGAACAAGTTCAAGCTGTTATATTGATTTTTTAGCTTATTTTCTTAAGCTCTACTATATAGCTATCTCTCGTCAATTTGGCAGTACTCAAAATTTCATTAAAAAAATCAGATTAGAGGCTCCGTTGTACTTTAATTCTTGATAACCATACTTGTTTTTATTCCCGTTTAAATCAAATAGCGGCTTCCTTGCCTTAGAACTTCACGTAGCTGGTCTCTTCTAGTATAGTGGGTGAACACACTAATTCTCTAAACTAACTTCTGAATTTCATGCATATTAATTCCCTTTTTAAATCTTCAACAAACAGCTCTTCTGCTTGGCCTCTCAAAATAAGCACACTTCTTATAAAAATTTATAATATTTACATTTAACATACTGCTAGTATATCTTCTCGACCTATTTCTAACCACTACATGATTCTTCCTGGCAGAGACTTCCTCCACTTTCGAACGATCCCGACCGTTGTGAGCGTGCATTCGTTGGTAACACAATTGGTCAAGCAAATGGTGTATATGACAAGCCCTTAGATCTCCGCTTTTGTGACTATACAAATGAAAAGTCTAAGCTCAAGGGGAAGTCTCTTACAGCTGCTCTCATGTCAGATGCTAAGTTTGATGGTGCTGACATGACCGAAGTTGTCATGTCCAAGGCTTATGCTGTTGGAGCTAGTTTCAAGGGTATAATACTCCTTCCCTTATTGTGATCACTGATCAGATATACTCCATCCGTCCCAAAATTATAGTCATGTTTTATTTCGGGTGTCCCAAAATTATAGTCCTGTTTCATTATTTGGACATTACTTTTCCCACTTTCTCATGCACTTTCCCACATACTTTCCCACTTTCCCATACACTATATTCCACTTTTCTTAAAACCCGTGCTTTTAGTCAAACATGACTATAATTTTGGGAAGGAGGGAGTACTTAATTTCTGAAGTCATCTTGCAGCGAACCACTTCCTTCGTCCCTAGAACTAGTTAACATCTACTTTTGCTCCGAGATTCAAAAGAGTGACAAAGTAGGGAGAGGGAAATAGATCATGGGTCTGAAAATAACTATTTCCTCTGTTTTTTTTTTATTTTACTTGCACTATTTTCCTGTTTTGGAAGTTGCGTATTATTTGCACCATTTCGTTTTATGGTATGCATTCACATGCTTTGTGGTGTGTTCACACACCAAATACCAATTTTACCCTTATACATGTTTTATATTTACCATTAATACCTAACCTTTTCTACTTAATTTGTTTGTTATCAGATGGGCATTCTTGATATTTACTTTCTTTGTTAATGTGTGTGCCCAACCTAAATGGTGCAAGTAAAAAAAAAAACGGAGGAATACTGACTTCTTTGACGGACATCGGATGATGTTAACTTGTTTTAGGGACAGAGGGAGTATTTGTTGATTAATCAAATGCTGGTGGTGTAGAATGTTATGTAAAATGTTTTTTTTTTGGCTGATCAAGGGTGATTTATATGCAGGTACTGACTTCACAAATGCAGTCATAGATCGCGTTAATTTTGGCAAGTCCGATCTAGAAGGAGCTGTGTTTAAGAATACCGTATTATCAGGGTCCACTTTCGAGGAGGCTAAACTAGACGGTGTCATATTTGAGGACACCATTATTGGTTATGTTGATCTTCAAAAGATCTGTCTTAATAAATCTATCAGTGAGGAAGGAAGAGATGTACTTGGGTGTCGATGAAGCTAATGTCCTCCTACCTATGCTCTCTCTCCCGAGAGTCTCTACCCCGTTCTCTTTTCAACAATTTTGTGTGAAGAAAACAAGTATGTTTTAGAGGTAATTCATATACTCGAATGTATATTTTGTAATTGACAGTTTATGATGATTTGTTCTGTATAATAGTGATGCACTTATCTCTGATAAAATGAAGAAGTTCACATTAATCTCCATTTCTTAATTCTTATACTGTCATTCTTTGAACAAAATGTGCACCATTTTGGTGGTTGCTAGTGTTTTTAGCACGGGTTATGTTATTTGGTAC

mRNA sequence

TCCATTTATTATCAAGTTTGAGGGGGAAAAGATCTTCTTATAATAAATAAAAAAAAAAGAAAAAGAAAAGAAGTTTGAGTGCCACGTAAGAAGATAAGCTGCCCAAGGAGGGAGGAAGAAGGGAGAGAGAAAAAGATAGGAAATGCAAATGATAAACATAATTTGACAAAATGGCGAGTATTGGCATTTCCATTCACCCAAATGGCATCTCCTTGAAAAATTCCTCTGTTAAACGCCATCTTTTTTCTGCTCGAAAACTTCAGTTATCTTTCCCAATCAACTGCTCTGCTGTTGGGAATGGATTGGAGAAAGAAAACTCGTCTCAATTCAAAGAACTTAGGAATGTTGCATTTGGCCTCCTGGCCACGTTGGCAGTCACAGCTGCCTCGCCTGTAATAGCTGCTAACCAGAGACTTCCTCCACTTTCGAACGATCCCGACCGTTGTGAGCGTGCATTCGTTGGTAACACAATTGGTCAAGCAAATGGTGTATATGACAAGCCCTTAGATCTCCGCTTTTGTGACTATACAAATGAAAAGTCTAAGCTCAAGGGGAAGTCTCTTACAGCTGCTCTCATGTCAGATGCTAAGTTTGATGGTGCTGACATGACCGAAGTTGTCATGTCCAAGGCTTATGCTGTTGGAGCTAGTTTCAAGGGTACTGACTTCACAAATGCAGTCATAGATCGCGTTAATTTTGGCAAGTCCGATCTAGAAGGAGCTGTGTTTAAGAATACCGTATTATCAGGGTCCACTTTCGAGGAGGCTAAACTAGACGGTGTCATATTTGAGGACACCATTATTGGTTATGTTGATCTTCAAAAGATCTGTCTTAATAAATCTATCAGTGAGGAAGGAAGAGATGTACTTGGGTGTCGATGAAGCTAATGTCCTCCTACCTATGCTCTCTCTCCCGAGAGTCTCTACCCCGTTCTCTTTTCAACAATTTTGTGTGAAGAAAACAAGTATGTTTTAGAGGTAATTCATATACTCGAATGTATATTTTGTAATTGACAGTTTATGATGATTTGTTCTGTATAATAGTGATGCACTTATCTCTGATAAAATGAAGAAGTTCACATTAATCTCCATTTCTTAATTCTTATACTGTCATTCTTTGAACAAAATGTGCACCATTTTGGTGGTTGCTAGTGTTTTTAGCACGGGTTATGTTATTTGGTAC

Coding sequence (CDS)

ATGGCGAGTATTGGCATTTCCATTCACCCAAATGGCATCTCCTTGAAAAATTCCTCTGTTAAACGCCATCTTTTTTCTGCTCGAAAACTTCAGTTATCTTTCCCAATCAACTGCTCTGCTGTTGGGAATGGATTGGAGAAAGAAAACTCGTCTCAATTCAAAGAACTTAGGAATGTTGCATTTGGCCTCCTGGCCACGTTGGCAGTCACAGCTGCCTCGCCTGTAATAGCTGCTAACCAGAGACTTCCTCCACTTTCGAACGATCCCGACCGTTGTGAGCGTGCATTCGTTGGTAACACAATTGGTCAAGCAAATGGTGTATATGACAAGCCCTTAGATCTCCGCTTTTGTGACTATACAAATGAAAAGTCTAAGCTCAAGGGGAAGTCTCTTACAGCTGCTCTCATGTCAGATGCTAAGTTTGATGGTGCTGACATGACCGAAGTTGTCATGTCCAAGGCTTATGCTGTTGGAGCTAGTTTCAAGGGTACTGACTTCACAAATGCAGTCATAGATCGCGTTAATTTTGGCAAGTCCGATCTAGAAGGAGCTGTGTTTAAGAATACCGTATTATCAGGGTCCACTTTCGAGGAGGCTAAACTAGACGGTGTCATATTTGAGGACACCATTATTGGTTATGTTGATCTTCAAAAGATCTGTCTTAATAAATCTATCAGTGAGGAAGGAAGAGATGTACTTGGGTGTCGATGA

Protein sequence

MASIGISIHPNGISLKNSSVKRHLFSARKLQLSFPINCSAVGNGLEKENSSQFKELRNVAFGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYTNEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSDLEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo02595	Spo02595	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo02595.1	Spo02595.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo02595.1.utr5p.1	Spo02595.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo02595.1.CDS.4	Spo02595.1.CDS.4	CDS
Spo02595.1.CDS.3	Spo02595.1.CDS.3	CDS
Spo02595.1.CDS.2	Spo02595.1.CDS.2	CDS
Spo02595.1.CDS.1	Spo02595.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo02595.1.utr3p.1	Spo02595.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo02595.1.exon.4	Spo02595.1.exon.4	exon
Spo02595.1.exon.3	Spo02595.1.exon.3	exon
Spo02595.1.exon.2	Spo02595.1.exon.2	exon
Spo02595.1.exon.1	Spo02595.1.exon.1	exon

Homology

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BLAST of Spo02595.1 vs. NCBI nr
Match: gi|902224199|gb|KNA19719.1| (hypothetical protein SOVF_059040 [Spinacia oleracea])

HSP 1 Score: 461.5 bits (1186), Expect = 9.100e-127
Identity = 235/236 (99.58%), Postives = 235/236 (99.58%), Query Frame = 1


		  
Query: 1   MASIGISIHPNGISLKNSSVKRHLFSARKLQLSFPINCSAVGNGLEKENSSQFKELRNVA 60
           MASIGISIHPNGISLKNSSVK HLFSARKLQLSFPINCSAVGNGLEKENSSQFKELRNVA
Sbjct: 1   MASIGISIHPNGISLKNSSVKCHLFSARKLQLSFPINCSAVGNGLEKENSSQFKELRNVA 60

Query: 61  FGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYT 120
           FGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYT
Sbjct: 61  FGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYT 120

Query: 121 NEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSD 180
           NEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSD
Sbjct: 121 NEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSD 180

Query: 181 LEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR 237
           LEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR
Sbjct: 181 LEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR 236

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BLAST of Spo02595.1 vs. NCBI nr
Match: gi|731321534|ref|XP_010671403.1| (PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 405.6 bits (1041), Expect = 5.900e-110
Identity = 200/236 (84.75%), Postives = 220/236 (93.22%), Query Frame = 1


		  
Query: 1   MASIGISIHPNGISLKNSSVKRHLFSARKLQLSFPINCSAVGNGLEKENSSQFKELRNVA 60
           MASIGISIHPNG+SL+NSS KRH F  +KL LSFPINCS +GN  EKENSSQFK LRNVA
Sbjct: 1   MASIGISIHPNGLSLRNSSTKRHCFPPQKLHLSFPINCSVIGNEFEKENSSQFKGLRNVA 60

Query: 61  FGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYT 120
           FGLLAT AVTAASPVIAA QRLPPLS +P+RCERAFVGNTIGQANGVYDKPLDLRFCDY+
Sbjct: 61  FGLLATWAVTAASPVIAAGQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPLDLRFCDYS 120

Query: 121 NEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSD 180
           N+KS LKGKSL+AAL+SDAKFDGADMTEV+MSKAYAVGASFKGTDFTNAV+DRVNFGK++
Sbjct: 121 NDKSNLKGKSLSAALVSDAKFDGADMTEVIMSKAYAVGASFKGTDFTNAVLDRVNFGKAN 180

Query: 181 LEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR 237
           L+GAVFKNTVLSGSTFEEA+L+ V+FEDTIIGYVDLQK+CLNKSIS+EGR  LGCR
Sbjct: 181 LQGAVFKNTVLSGSTFEEAQLEDVVFEDTIIGYVDLQKLCLNKSISDEGRAELGCR 236

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BLAST of Spo02595.1 vs. NCBI nr
Match: gi|302143933|emb|CBI23038.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 340.5 bits (872), Expect = 2.300e-90
Identity = 171/225 (76.00%), Postives = 198/225 (88.00%), Query Frame = 1


		  
Query: 13  ISLKNSSVKRHLFSARKLQLSFPINCSAVGNGLE-KENSSQFKELRNVAFGLLATLAVTA 72
           +SL++SS KRH FS  +L   F I+CSA  +  E K +SSQFKEL+NVAFG+LA  AVTA
Sbjct: 8   LSLQHSSPKRHRFSVPELHSPFRISCSASWDSPELKASSSQFKELKNVAFGILAVCAVTA 67

Query: 73  ASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYTNEKSKLKGKSL 132
           ASPVIAA+QRLPPLS +P+RCERAFVGNTIGQANGVYDKP+DLRFCDYTNEKS LKGKSL
Sbjct: 68  ASPVIAASQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKSNLKGKSL 127

Query: 133 TAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSDLEGAVFKNTVL 192
            AALMS+AKFDGADM+EVVMSKAYAVGASFKG DFTNAV+DRVNFGK++L+GAVFKNTVL
Sbjct: 128 AAALMSEAKFDGADMSEVVMSKAYAVGASFKGVDFTNAVLDRVNFGKANLQGAVFKNTVL 187

Query: 193 SGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR 237
           SGSTF++A+L+  +FEDTIIGY+DLQKIC N SI+ +GR  LGCR
Sbjct: 188 SGSTFDQAQLEDAVFEDTIIGYIDLQKICTNTSINADGRAELGCR 232

[Close]

BLAST of Spo02595.1 vs. NCBI nr
Match: gi|359490718|ref|XP_002275994.2| (PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Vitis vinifera])

HSP 1 Score: 340.5 bits (872), Expect = 2.300e-90
Identity = 171/225 (76.00%), Postives = 198/225 (88.00%), Query Frame = 1


		  
Query: 13  ISLKNSSVKRHLFSARKLQLSFPINCSAVGNGLE-KENSSQFKELRNVAFGLLATLAVTA 72
           +SL++SS KRH FS  +L   F I+CSA  +  E K +SSQFKEL+NVAFG+LA  AVTA
Sbjct: 20  LSLQHSSPKRHRFSVPELHSPFRISCSASWDSPELKASSSQFKELKNVAFGILAVCAVTA 79

Query: 73  ASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYTNEKSKLKGKSL 132
           ASPVIAA+QRLPPLS +P+RCERAFVGNTIGQANGVYDKP+DLRFCDYTNEKS LKGKSL
Sbjct: 80  ASPVIAASQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKSNLKGKSL 139

Query: 133 TAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSDLEGAVFKNTVL 192
            AALMS+AKFDGADM+EVVMSKAYAVGASFKG DFTNAV+DRVNFGK++L+GAVFKNTVL
Sbjct: 140 AAALMSEAKFDGADMSEVVMSKAYAVGASFKGVDFTNAVLDRVNFGKANLQGAVFKNTVL 199

Query: 193 SGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR 237
           SGSTF++A+L+  +FEDTIIGY+DLQKIC N SI+ +GR  LGCR
Sbjct: 200 SGSTFDQAQLEDAVFEDTIIGYIDLQKICTNTSINADGRAELGCR 244

[Close]

BLAST of Spo02595.1 vs. NCBI nr
Match: gi|568877960|ref|XP_006491985.1| (PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Citrus sinensis])

HSP 1 Score: 326.2 bits (835), Expect = 4.600e-86
Identity = 171/238 (71.85%), Postives = 190/238 (79.83%), Query Frame = 1


		  
Query: 1   MASIGISIHPNGISLKNSSVKRHLFS-ARKLQLSFPINCSAVGNGLE-KENSSQFKELRN 60
           MA+I + +  N  S ++ S  RH F   R       I CSA  N  E KE+ S  KEL+ 
Sbjct: 1   MATISVPLSHNTSSRQHLSTIRHRFHFPRSSHSPLTIACSARRNSSESKESFSHLKELKG 60

Query: 61  VAFGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCD 120
           VA G LA  AVTAASPVIAANQRLPPLS +PDRCERAFVGNTIGQANGVYDKP+DLRFCD
Sbjct: 61  VACGFLAAWAVTAASPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCD 120

Query: 121 YTNEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGK 180
           YTNEKS LKGKSL AALMSDAKFDGADM+EVVMSKAYAVGASFKG DF+NAV+DRVNFGK
Sbjct: 121 YTNEKSNLKGKSLAAALMSDAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGK 180

Query: 181 SDLEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR 237
           + LEGAVFKNTVLSGSTF EA+L   +FEDTIIGYVDLQK+C N ++S +GRD LGCR
Sbjct: 181 AHLEGAVFKNTVLSGSTFNEAQLQDAVFEDTIIGYVDLQKLCTNTTLSPDGRDELGCR 238

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BLAST of Spo02595.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RLC7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_059040 PE=4 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 6.300e-127
Identity = 235/236 (99.58%), Postives = 235/236 (99.58%), Query Frame = 1


		  
Query: 1   MASIGISIHPNGISLKNSSVKRHLFSARKLQLSFPINCSAVGNGLEKENSSQFKELRNVA 60
           MASIGISIHPNGISLKNSSVK HLFSARKLQLSFPINCSAVGNGLEKENSSQFKELRNVA
Sbjct: 1   MASIGISIHPNGISLKNSSVKCHLFSARKLQLSFPINCSAVGNGLEKENSSQFKELRNVA 60

Query: 61  FGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYT 120
           FGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYT
Sbjct: 61  FGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYT 120

Query: 121 NEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSD 180
           NEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSD
Sbjct: 121 NEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSD 180

Query: 181 LEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR 237
           LEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR
Sbjct: 181 LEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR 236

[Close]

BLAST of Spo02595.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FJB3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g051540 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 4.100e-110
Identity = 200/236 (84.75%), Postives = 220/236 (93.22%), Query Frame = 1


		  
Query: 1   MASIGISIHPNGISLKNSSVKRHLFSARKLQLSFPINCSAVGNGLEKENSSQFKELRNVA 60
           MASIGISIHPNG+SL+NSS KRH F  +KL LSFPINCS +GN  EKENSSQFK LRNVA
Sbjct: 1   MASIGISIHPNGLSLRNSSTKRHCFPPQKLHLSFPINCSVIGNEFEKENSSQFKGLRNVA 60

Query: 61  FGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYT 120
           FGLLAT AVTAASPVIAA QRLPPLS +P+RCERAFVGNTIGQANGVYDKPLDLRFCDY+
Sbjct: 61  FGLLATWAVTAASPVIAAGQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPLDLRFCDYS 120

Query: 121 NEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSD 180
           N+KS LKGKSL+AAL+SDAKFDGADMTEV+MSKAYAVGASFKGTDFTNAV+DRVNFGK++
Sbjct: 121 NDKSNLKGKSLSAALVSDAKFDGADMTEVIMSKAYAVGASFKGTDFTNAVLDRVNFGKAN 180

Query: 181 LEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR 237
           L+GAVFKNTVLSGSTFEEA+L+ V+FEDTIIGYVDLQK+CLNKSIS+EGR  LGCR
Sbjct: 181 LQGAVFKNTVLSGSTFEEAQLEDVVFEDTIIGYVDLQKLCLNKSISDEGRAELGCR 236

[Close]

BLAST of Spo02595.1 vs. UniProtKB/TrEMBL
Match: E0CV77_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g01540 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 1.600e-90
Identity = 171/225 (76.00%), Postives = 198/225 (88.00%), Query Frame = 1


		  
Query: 13  ISLKNSSVKRHLFSARKLQLSFPINCSAVGNGLE-KENSSQFKELRNVAFGLLATLAVTA 72
           +SL++SS KRH FS  +L   F I+CSA  +  E K +SSQFKEL+NVAFG+LA  AVTA
Sbjct: 8   LSLQHSSPKRHRFSVPELHSPFRISCSASWDSPELKASSSQFKELKNVAFGILAVCAVTA 67

Query: 73  ASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYTNEKSKLKGKSL 132
           ASPVIAA+QRLPPLS +P+RCERAFVGNTIGQANGVYDKP+DLRFCDYTNEKS LKGKSL
Sbjct: 68  ASPVIAASQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKSNLKGKSL 127

Query: 133 TAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSDLEGAVFKNTVL 192
            AALMS+AKFDGADM+EVVMSKAYAVGASFKG DFTNAV+DRVNFGK++L+GAVFKNTVL
Sbjct: 128 AAALMSEAKFDGADMSEVVMSKAYAVGASFKGVDFTNAVLDRVNFGKANLQGAVFKNTVL 187

Query: 193 SGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR 237
           SGSTF++A+L+  +FEDTIIGY+DLQKIC N SI+ +GR  LGCR
Sbjct: 188 SGSTFDQAQLEDAVFEDTIIGYIDLQKICTNTSINADGRAELGCR 232

[Close]

BLAST of Spo02595.1 vs. UniProtKB/TrEMBL
Match: V4TLV7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021983mg PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 9.300e-86
Identity = 169/238 (71.01%), Postives = 190/238 (79.83%), Query Frame = 1


		  
Query: 1   MASIGISIHPNGISLKNSSVKRHLFS-ARKLQLSFPINCSAVGNGLE-KENSSQFKELRN 60
           MA+I + +  N  SL++ S  RH F   R       + CSA  N  E KE+ S  KEL+ 
Sbjct: 1   MATISVPLSHNTSSLQHLSTIRHRFHFPRSSHSPLTVACSARRNSSEPKESFSHLKELKG 60

Query: 61  VAFGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCD 120
           VA G LA  AVTAASPVIAANQRLPPLS +PDRCERAFVGNTIGQANGVYDKP+DLRFCD
Sbjct: 61  VACGFLAAWAVTAASPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCD 120

Query: 121 YTNEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGK 180
           YTNEKS LKGKSL AALMSDAKFDGADM+EVVMSKAYAVGASFKG DF+NAV+DRVNFGK
Sbjct: 121 YTNEKSNLKGKSLAAALMSDAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGK 180

Query: 181 SDLEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR 237
           + LEGAVFKNTVLSGSTF EA+L   +FEDTIIGY+DLQK+C N ++S +GR  LGCR
Sbjct: 181 AHLEGAVFKNTVLSGSTFNEAQLQDAVFEDTIIGYIDLQKLCTNTTLSPDGRAELGCR 238

[Close]

BLAST of Spo02595.1 vs. UniProtKB/TrEMBL
Match: A0A061G209_THECC (Tetratricopeptide repeat-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_015450 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 4.600e-85
Identity = 165/238 (69.33%), Postives = 190/238 (79.83%), Query Frame = 1


		  
Query: 1   MASIGISIHPNGISLKNSSVKRHLFSARKLQLSFPINCSAVGNGLEK--ENSSQFKELRN 60
           MA++   +  N +SL+  S KR      +L L   INCS+    + K  ++SS FKELR+
Sbjct: 1   MATLSTPLSQNALSLRQLSTKRLHCPLHQLPLPIRINCSSASKCVFKTEKSSSPFKELRS 60

Query: 61  VAFGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCD 120
           VA GLLA  AV  ASPVIAANQRLPPLS +P+RCERAFVGNTIGQANGVYDKPLDLRFCD
Sbjct: 61  VACGLLAVCAVATASPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPLDLRFCD 120

Query: 121 YTNEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGK 180
           YTNEKS LKGKSL AALMSDAKFDGADM+E VMSKAYAVGASFKG +F+NAV+DRVNF K
Sbjct: 121 YTNEKSNLKGKSLAAALMSDAKFDGADMSEAVMSKAYAVGASFKGANFSNAVLDRVNFDK 180

Query: 181 SDLEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR 237
           +DL GAVFKNTVLSGSTF  A+L+  +FEDTIIGY+DLQK+C N S+S +GR  LGCR
Sbjct: 181 ADLRGAVFKNTVLSGSTFNNAQLEDAVFEDTIIGYIDLQKLCTNTSVSADGRAELGCR 238

[Close]

BLAST of Spo02595.1 vs. ExPASy Swiss-Prot
Match: TL17_ARATH (Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=TL17 PE=1 SV=2)

HSP 1 Score: 297.7 bits (761), Expect = 1.100e-79
Identity = 160/241 (66.39%), Postives = 188/241 (78.01%), Query Frame = 1


		  
Query: 1   MASIGISIHPNGISLKNSSVKRHLFSARKLQLSFPINCSAV-----GNGLEKENSSQFKE 60
           MAS+ +    N IS    SV       R+ +    ++CSA      G G++K +    KE
Sbjct: 1   MASLPVQFTRNQISSPFFSVNLR----REPRSLVTVHCSAGENRENGEGVKK-SLFPLKE 60

Query: 61  LRNVAFGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLR 120
           L ++A   L    +T ASPVIAANQRLPPLS +PDRCE+AFVGNTIGQANGVYDKPLDLR
Sbjct: 61  LGSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLR 120

Query: 121 FCDYTNEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVN 180
           FCDYTN+++ LKGK+L+AALM  AKFDGADMTEVVMSKAYAV ASFKG +FTNAVIDRVN
Sbjct: 121 FCDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVN 180

Query: 181 FGKSDLEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGC 237
           FGKS+L+GAVF+NTVLSGSTFEEA L+ V+FEDTIIGY+DLQKIC N+SI+EEGR VLGC
Sbjct: 181 FGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVLGC 236

[Close]

BLAST of Spo02595.1 vs. ExPASy Swiss-Prot
Match: TL203_ARATH (Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana GN=TL20.3 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.300e-10
Identity = 62/240 (25.83%), Postives = 106/240 (44.17%), Query Frame = 1


		  
Query: 1   MASIGISIHPNGISLKNSSVKRHLFSARKLQLSFPINCSAVGNGLEKENSSQFKELRNVA 60
           M S+ IS   + +S      +R+L   R+LQLS   N     +   +E      E     
Sbjct: 11  MKSLDISRSSSSVSRSPYHFQRYLL--RRLQLSSRSNLEIKDSSNTREGCCSSAESNTWK 70

Query: 61  FGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYT 120
                 L+   A+ VIA++  +P ++ + +R E    G   G  +       DL    ++
Sbjct: 71  ----RILSAAMAAAVIASSSGVPAMA-ELNRFEADTRGE-FGIGSAAQYGSADLSKTVHS 130

Query: 121 NEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSD 180
           NE    +  + T+A M ++ F G+      + KA A  A+F G D ++ ++DR+   +++
Sbjct: 131 NEN--FRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEAN 190

Query: 181 LEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKIC-----LNKSISEEGRDVLGC 236
           L  AV   +VL+ S    AK++G  F D +I  +  Q +C      N     + R  LGC
Sbjct: 191 LTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 240

[Close]

BLAST of Spo02595.1 vs. ExPASy Swiss-Prot
Match: TL17_SPIOL (Thylakoid lumenal 17.4 kDa protein (Fragment) OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 2.700e-6
Identity = 23/23 (100.00%), Postives = 23/23 (100.00%), Query Frame = 1


		  
Query: 78  ANQRLPPLSNDPDRCERAFVGNT 101
           ANQRLPPLSNDPDRCERAFVGNT
Sbjct: 1   ANQRLPPLSNDPDRCERAFVGNT 23

[Close]

BLAST of Spo02595.1 vs. TAIR (Arabidopsis)
Match: AT5G53490.3 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 295.0 bits (754), Expect = 4.000e-80
Identity = 148/195 (75.90%), Postives = 170/195 (87.18%), Query Frame = 1


		  
Query: 42  GNGLEKENSSQFKELRNVAFGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTI 101
           G G++K +    KEL ++A   L    +T ASPVIAANQRLPPLS +PDRCE+AFVGNTI
Sbjct: 57  GEGVKK-SLFPLKELGSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTI 116

Query: 102 GQANGVYDKPLDLRFCDYTNEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASF 161
           GQANGVYDKPLDLRFCDYTN+++ LKGK+L+AALM  AKFDGADMTEVVMSKAYAV ASF
Sbjct: 117 GQANGVYDKPLDLRFCDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASF 176

Query: 162 KGTDFTNAVIDRVNFGKSDLEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICL 221
           KG +FTNAVIDRVNFGKS+L+GAVF+NTVLSGSTFEEA L+ V+FEDTIIGY+DLQKIC 
Sbjct: 177 KGVNFTNAVIDRVNFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICR 236

Query: 222 NKSISEEGRDVLGCR 237
           N+SI+EEGR VLGCR
Sbjct: 237 NESINEEGRLVLGCR 250

[Close]

BLAST of Spo02595.1 vs. TAIR (Arabidopsis)
Match: AT1G12250.1 (Pentapeptide repeat-containing protein)

HSP 1 Score: 66.2 bits (160), Expect = 3.000e-11
Identity = 62/240 (25.83%), Postives = 106/240 (44.17%), Query Frame = 1


		  
Query: 1   MASIGISIHPNGISLKNSSVKRHLFSARKLQLSFPINCSAVGNGLEKENSSQFKELRNVA 60
           M S+ IS   + +S      +R+L   R+LQLS   N     +   +E      E     
Sbjct: 11  MKSLDISRSSSSVSRSPYHFQRYLL--RRLQLSSRSNLEIKDSSNTREGCCSSAESNTWK 70

Query: 61  FGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYT 120
                 L+   A+ VIA++  +P ++ + +R E    G   G  +       DL    ++
Sbjct: 71  ----RILSAAMAAAVIASSSGVPAMA-ELNRFEADTRGE-FGIGSAAQYGSADLSKTVHS 130

Query: 121 NEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSD 180
           NE    +  + T+A M ++ F G+      + KA A  A+F G D ++ ++DR+   +++
Sbjct: 131 NEN--FRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEAN 190

Query: 181 LEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKIC-----LNKSISEEGRDVLGC 236
           L  AV   +VL+ S    AK++G  F D +I  +  Q +C      N     + R  LGC
Sbjct: 191 LTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 240

The following BLAST results are available for this feature:

BLAST of Spo02595.1 vs. NCBI nr
BLAST of Spo02595.1 vs. UniProtKB/TrEMBL
BLAST of Spo02595.1 vs. ExPASy Swiss-Prot
BLAST of Spo02595.1 vs. TAIR (Arabidopsis)

BLAST of Spo02595.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902224199\|gb\|KNA19719.1\|	9.1e-127	99.5	hypothetical protein SOVF_0590...	[more]
gi\|731321534\|ref\|XP_010671403.1\|	5.9e-110	84.7	PREDICTED: thylakoid lumenal 1...	[more]
gi\|302143933\|emb\|CBI23038.3\|	2.3e-90	76.0	unnamed protein product [Vitis...	[more]
gi\|359490718\|ref\|XP_002275994.2\|	2.3e-90	76.0	PREDICTED: thylakoid lumenal 1...	[more]
gi\|568877960\|ref\|XP_006491985.1\|	4.6e-86	71.8	PREDICTED: thylakoid lumenal 1...	[more]

BLAST of Spo02595.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RLC7_SPIOL	6.3e-127	99.5	Uncharacterized protein OS=Spi...	[more]
A0A0J8FJB3_BETVU	4.1e-110	84.7	Uncharacterized protein OS=Bet...	[more]
E0CV77_VITVI	1.6e-90	76.0	Putative uncharacterized prote...	[more]
V4TLV7_9ROSI	9.3e-86	71.0	Uncharacterized protein OS=Cit...	[more]
A0A061G209_THECC	4.6e-85	69.3	Tetratricopeptide repeat-like ...	[more]

BLAST of Spo02595.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3


Match Name	E-value	Identity	Description
TL17_ARATH	1.1e-79	66.3	Thylakoid lumenal 17.4 kDa pro...	[more]
TL203_ARATH	5.3e-10	25.8	Thylakoid lumenal protein TL20...	[more]
TL17_SPIOL	2.7e-6	100.	Thylakoid lumenal 17.4 kDa pro...	[more]

BLAST of Spo02595.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT5G53490.3	4.0e-80	75.9	Tetratricopeptide repeat (TPR)...	[more]
AT1G12250.1	3.0e-11	25.8	Pentapeptide repeat-containing...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001646	Pentapeptide repeat	PFAM	PF00805	Pentapeptide	coord: 172..208 score: 1.5E-7coord: 125..163 score: 4.
None	No IPR available	PANTHER	PTHR14136	UNCHARACTERIZED	coord: 13..230 score: 1.1E
None	No IPR available	PANTHER	PTHR14136:SF11	THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC	coord: 13..230 score: 1.1E
None	No IPR available	unknown	SSF141571	Pentapeptide repeat-like	coord: 114..222 score: 1.12