Spo02647.1 (mRNA) | SpinachBase

Overview


Name	Spo02647.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Calcium-binding EF-hand family protein isoform 1
Location	SpoScf_01265 : 34386 .. 39498 (+)
Sequence length	372

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTTTTCTATAACAGAGTTCAAAGCTGTTACAAAGGAAATATGTAAGCTGCCATCCTTCTTCTCTATCGTCCTTTTCCAAAAGATTGATGTCAACGGTACAGAATTTGTCACCAGGTATACAACTTAATGATGGCAACGTTGCTGGAAATTGAAATTTATTCCTGTTTACTTTGCATGCTTTATACTTGTCATATAACATGTAATCCAATGCATCTGCAGTGTTGCGTTGATGAGGCTAGCTGAGATGGACTACTGTGGGACTACCAGGTAACAACCTTATTTAATATGTTTCTATATAGGGTTTTTGATGCTTTCATTGTGTGTAGTAGGTAAACATGAATTTGAAATTTTTTGTGCTGCATAATTTCCGAACTTTGGTAGGTGAGTCCTATTCTTTGGAAAAACTTTGGTGCTTCATAAGTAAATGTAATAAAATCAGCAGGCCTTAGTATCAGATTCTTTGATAACAATGTTGTTGAGATTTCTGCTGGAGGAATAACAGCACAGAAGAATGTTTTTTCTGTAGATGTTAGTGCAGGTTGCTTATCTGCATGAAAGAAAATTAACTGCAATGTATGCTTCTGTTTGTTTGAAGTTTGAATTGACTAGGGGCCTTATCATTTTTGCATTTATGTAAAGAAGGTCATGGATCTAAATTCCTTATAAGGAAACTATACTTATTTCCTCTTTTGCTTCTCACACATTGATTAAGGTGACCTCAGCCCACAAAAAGGTAGAAATTCATTGGACTTGTGAAATTGTCTAACATAAACATTGATCTGGATCCTCAATACAGCTATATAATCAAGATTTTTATTGACAAAAAGTATGCTTTGCCTTATCTGGTGTTGGATGCTTTGGTTGCTCATTTCATGAGATTTGTAGAAGACTCAAGGGTTATGCTAGTGATCTGGCATCAGACTCTTCTTGCCTTTGTTCAAAGGTTAGTAATCCTCCTCTCCCTGTAGAACAGAAAATAATTTCGTTGTCAATGACATGCTTGAGCATGTGGTTTCCCATTTTCATTTCTCCAAATATTTAAAGTTCTCAGGGACTTTTTCTTTTTTCCTGAACTTTGTGGTTTCTCTTGTTAATTTATAATGGCCTATCCCATCTTGAAGCATTCAGTTTCTTTGTATATCTGCTCATCTTTGTATGAAAATTATATTTTGTTTCTCTTTAGTTTTCAAAAAGGATGTCAGTTAATTATTTATGAGCTCTATGGAAATTAGTTATCTAGGTAATCTTGAGTAGGGTTTGTAAATTCCTGGAGATTAGTGTTTCAAATGTTGCTGTCATTGTTTCTTTAGGATTTCTATGGTCGATGGGATTGGAAATAGGTTCGTTTGTTGGTAGTTTAGATCGAAAATGCCATTTTTGGCCATAAATGACCTATATCGACCCAAATGAACCATAGGCGTGCATAACGAACTTTAAATGAGTCTTATAATCATATAACTAATCATCTAAATCATGAAAAAGGTTTAGAATGTGGATATAAGTTGGTTTGTTGGTAGTTGGGATCGAAAATGCCATTTTTGGCCATAAATGACCTATATCGACCCAAATGAACCATAGGCGTGCATAACAAACTTGAAATGAGTCTTATAATCATATAACTAATCATCTAAATCATGAAAAAGTTTAGAATTTGGACTTAGGTTCGTTTGTTGGCAGTTGGGATCGAAAATGCCATTTTTGGCCATAAATGGCCTATATTGACCCAAATGACCATTAGGCTTGCCTAACAAACTTGAAATGAGTTTCATAAACAAATAGCTAATCATATGAATCATGAAAAAGGGTTAGAATGTGGAAATAGGTTCGTTTGTTGGTAGTTGGGATCAAAAATGCCATTTTTGGCCATAAATGACATATATCGACCCAAATTACCCATAGGCGTGCATAAAGAACTTGAAATGAGTCTTATAAACATATAACTAATCATATGAATCATGAAAAACGTTTAGAATATGGAAATAGGTTCGTTTGTTGGTAATTGGGATCGAAAAAGCCATTTTTGGCCATAAATGACCTATATCGACTAAAATGAACCATAGGTGTGCATAACGAACTTGAAATGAGTTTTATAATCATATAACTAATAATCTAAATCATGAAAAAGGTTTAGAATTTGGATATAAGTTCGTTTGTTGTTAGTTGGGATCGAAAATGCCATTTTGGACATAAATGACCTATATCGACCCGAATGAACCATAGGCGTGCATAACGAACTTGAAATGAGTCTTATAATCATATAACTAATCATCTAAATCATGAAAAGGGTTTAGAATTTGGACTTAGGTTTCTTTGTTGGTAGTTGGGATCGAAAATGCCATTTTTGGCCATAAATGGCCTATATCGACCCAAATGACCATTAGGCTTGCATAACGAACTTGAAATTAGTTTCATAAACATGTAACTAATCATATGAATCATGAAAAAGGGATAGAATGTGGAAATAGGTTCGTTTGTTGGTAGTTGGGATAAAAAATGCCATTTTTGGCCATAAATGACCTATATCGACCCAAATGACCCATAGGCGTGCATAACGAACTTGAAATAAGTCTTATAAACATATAAGTAATCATATGAATCATGAAAAACGTTTAGAATATGGAAATAGGTTCGTTTGTTGGTAATTGAGATCGAAAATGCCATTTTTGGCCATAAATGACCTATATCGACTCAAATGAACCATAAGCGTGCATAACGAACTTGAAATGAGTGTTATAATCATATAAATAATCATCTAAATCATGAAAAAGGTTTAGAATGTGGATATAAGTTCGTTTGTTGGTAGTTGGGATCGAAAATGCCATTTTGGCCATAAATGACCTATATCGACCCAAATGAACCATAGGCGTGCATAACGAACTTGAAATGACTCTTATAATCATATAACTAATCATCTAAATCATGAAAGAGGTTTATAATTTGGACTTAGGTTCGTTTGTTGGTAGTTGGGATCGAAAATGCCATTTTTGGCCATAAATGGCCTATATCGACCCAAATGACCATTAGACTTGCATAACGAACTTGAAATGAGGTTCATAAACATATAACTAATCATATGAATCATGAAAAAGGGTTAGAATGTGGAAATAGGTTCGTTTGTTGGTAGTTGGGATCAAAAATGCCATTTTTGGCCTCAAATGACCTATATCGACCCAAATGAACCATAGGCGTGCATAACGAACTTGAAATGAGTCTTATAATCATATAACTAATCATCTAAATCATGAAAAAGGTTTAGAATGTGGATATAAGTTCATTTGTTGGTAGTTGGGATCGAAAATGCCATTTTTGGCCATAAATGACCTATATCGACCCAAATGAACCATAGGCTTGCATAACGAACTTGAAATGAGTCTTATAATCATATAACTAATCATCTAAATCATGAAAAAGGTTTAGAATTTGGACTTAGGTTCGTTTGTTGGTAGTTGGGATCGAAAATGCCATTTTTGGCCATAAATGGCCTATATCGACCCAAATGACCATTAGGCTTGCATAACGAACTTGAAATGAGTTTCATAAACATATAACTAATCATATGAATCATGAAAAAGGGTTAGAATGTGGATATAAGTTCGTTTGTTGGTAGTTGGGATCAAAAATGCCATTTTTGGCCATAAATGACCTATATCGACCCAAATGACCCATAGGCGTGAATAACGAACTTGAAATGAGTCTTATAAACATATAACTAATCATATGAATCATGAAAAAGATTTAGAAAGTGTCCTTGTGTTCATTTGGTTATATTTGGGATCGAAAATACCAATATAATTTCTATTTTCGCATATGAAACTTAATTTAATTTATTGGTTTGCATGTACGTTGTTCTTTTAAAGGTTTTCAAAACACCAAAGGAGGGGCCCTTTAACAAAGAGGAGTTGGATGAAGTTCGAGACAAGTGGGCTACTTACTTCAACGATTGGGAACTACCCTCAGTGTAATAAATAGAGCAGGCTTGTAGTTATCCGTGACTCTTGCATTATTTTGTTATTTATCGATTTAATTAATTACATTTGAATTAATTCGGTAATATTATTGGAAATTTGAAAATAATATCATTTTTGAGGAATGTCAAGCTGATGTTTGGTGAAACAGTATTCTATAAATTATAATGCAGAATTTTATATTGTAAAATCAGAAATTATATTGCAGAATATCAGGAATTATATTGCAGATTTTTTTAAAAAAAAATAAACTCAAAAGTTGCCCTTGTTGCAAACAAGAGCAACTTATGTGAGGCTTATAAGTTGCCCTTGTTAAGGGCAACTTTTGATAATTTTACAAAAGTGACCCCCCCATAGGTGGCACATATGAAGGGCAACTTATAAGCCTATTTAAGGGCAACTTATGATGTTTTTTCCTCTAGTGATTTCTATTTCCGATAATATTTTCCGATACGAGCAATGTTTCCGTTTCCGGCAACATCTACGACTTGGATAATATTTCTATTTCCGTCATGATCCATATTTCCGTTTCCGGCAATATCATCATTTTAGGAGTATTCTTTATTCTGTCTTTTGACAATTTCAGCTCCCACTAGAACCGAGATCCGTCGTTTCCGAATGTTCATAAATAGAGTATTTAATGAATAATATATTCACTTAAATACTTGATCCGTTCACGTACTATTTGTGTGACCCTACGGGTTCAGTCAAGAGTAAGTTGTGGATTAATATTATTAATTCCACTTAAACTGAAGCGGCCTCTAGCTAGGCATTCAGCTCACTTGATCTCACTGAATTTATTAACTTGTTTAATTAATACTGAACCGCATTTATTAGATTTAACATTGAATGCATACTTGGACCAAGGGCATTATTTCCTTCAGTATGACTCTTCTAACTACCCACTGACCATCTGTCACACTAGCATACATGAGAGAATTACATCCACATTTCCTAGACTTTTTCTAGTTTCTCAAATTTGTTTTATTCACAAAGGATTTACCTGCTACGGGCCTCTTACTATGTTTGTCTGTTTCACCAAAGCAATCACATCTCCACGTGGCAGTAATTAGAACCTTACCCGGACCCTTCCCCGGACCAATAGCACCACAATGGACTACCCCAAACCCTTCTTGCCTTCCG

mRNA sequence

ATGGTGTTTTCTATAACAGAGTTCAAAGCTGTTACAAAGGAAATATGTAAGCTGCCATCCTTCTTCTCTATCGTCCTTTTCCAAAAGATTGATGTCAACGGTACAGAATTTGTCACCAGTGTTGCGTTGATGAGGCTAGCTGAGATGGACTACTGTGGGACTACCAGAAGACTCAAGGGTTATGCTAGTGATCTGGCATCAGACTCTTCTTGCCTTTGTTCAAAGGATTTACCTGCTACGGGCCTCTTACTATGTTTGTCTGTTTCACCAAAGCAATCACATCTCCACGTGGCAGTAATTAGAACCTTACCCGGACCCTTCCCCGGACCAATAGCACCACAATGGACTACCCCAAACCCTTCTTGCCTTCCG

Coding sequence (CDS)

ATGGTGTTTTCTATAACAGAGTTCAAAGCTGTTACAAAGGAAATATGTAAGCTGCCATCCTTCTTCTCTATCGTCCTTTTCCAAAAGATTGATGTCAACGGTACAGAATTTGTCACCAGTGTTGCGTTGATGAGGCTAGCTGAGATGGACTACTGTGGGACTACCAGAAGACTCAAGGGTTATGCTAGTGATCTGGCATCAGACTCTTCTTGCCTTTGTTCAAAGGATTTACCTGCTACGGGCCTCTTACTATGTTTGTCTGTTTCACCAAAGCAATCACATCTCCACGTGGCAGTAATTAGAACCTTACCCGGACCCTTCCCCGGACCAATAGCACCACAATGGACTACCCCAAACCCTTCTTGCCTTCCG

Protein sequence

MVFSITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALMRLAEMDYCGTTRRLKGYASDLASDSSCLCSKDLPATGLLLCLSVSPKQSHLHVAVIRTLPGPFPGPIAPQWTTPNPSCLP

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo02647	Spo02647	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo02647.1	Spo02647.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo02647.1.exon.1	Spo02647.1.exon.1	exon
Spo02647.1.exon.2	Spo02647.1.exon.2	exon
Spo02647.1.exon.3	Spo02647.1.exon.3	exon
Spo02647.1.exon.4	Spo02647.1.exon.4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo02647.1.CDS.1	Spo02647.1.CDS.1	CDS
Spo02647.1.CDS.2	Spo02647.1.CDS.2	CDS
Spo02647.1.CDS.3	Spo02647.1.CDS.3	CDS
Spo02647.1.CDS.4	Spo02647.1.CDS.4	CDS

Homology

[Close]

BLAST of Spo02647.1 vs. NCBI nr
Match: gi|902204654|gb|KNA14936.1| (hypothetical protein SOVF_102760 [Spinacia oleracea])

HSP 1 Score: 100.1 bits (248), Expect = 2.800e-18
Identity = 49/50 (98.00%), Postives = 50/50 (100.00%), Query Frame = 1


		  
Query: 7   EFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALMRLAEMDYCGTTR 57
           +FKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALMRLAEMDYCGTTR
Sbjct: 95  KFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALMRLAEMDYCGTTR 144

[Close]

BLAST of Spo02647.1 vs. NCBI nr
Match: gi|902153503|gb|KNA05704.1| (hypothetical protein SOVF_187860 [Spinacia oleracea])

HSP 1 Score: 63.9 bits (154), Expect = 2.200e-7
Identity = 32/40 (80.00%), Postives = 34/40 (85.00%), Query Frame = 1


		  
Query: 5   ITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALM 45
           + EFKAVTKEICKLPSFFS VLFQKIDVNGT FVT  A +
Sbjct: 165 MNEFKAVTKEICKLPSFFSTVLFQKIDVNGTGFVTRDAFV 204

[Close]

BLAST of Spo02647.1 vs. NCBI nr
Match: gi|731366217|ref|XP_010694949.1| (PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta-like isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 61.2 bits (147), Expect = 1.400e-6
Identity = 30/38 (78.95%), Postives = 32/38 (84.21%), Query Frame = 1


		  
Query: 7   EFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALM 45
           EFKAVTKEICKLPSFFS VLFQKIDVN T F+T  A +
Sbjct: 168 EFKAVTKEICKLPSFFSTVLFQKIDVNSTGFITRDAFV 205

[Close]

BLAST of Spo02647.1 vs. NCBI nr
Match: gi|731366219|ref|XP_010694950.1| (PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta-like isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 61.2 bits (147), Expect = 1.400e-6
Identity = 30/40 (75.00%), Postives = 33/40 (82.50%), Query Frame = 1


		  
Query: 5   ITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALM 45
           + EFKAVTKEICKLPSFFS VLFQKIDVN T F+T  A +
Sbjct: 165 MNEFKAVTKEICKLPSFFSTVLFQKIDVNSTGFITRDAFV 204

[Close]

BLAST of Spo02647.1 vs. NCBI nr
Match: gi|743880858|ref|XP_011036317.1| (PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta-like isoform X2 [Populus euphratica])

HSP 1 Score: 59.7 bits (143), Expect = 4.200e-6
Identity = 28/40 (70.00%), Postives = 34/40 (85.00%), Query Frame = 1


		  
Query: 5   ITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALM 45
           I EFK+VTKE+CKLPSFFS VLF++IDVN T+FVT  A +
Sbjct: 164 IHEFKSVTKEVCKLPSFFSTVLFRRIDVNSTDFVTRDAFL 203

[Close]

BLAST of Spo02647.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R601_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_102760 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.000e-18
Identity = 49/50 (98.00%), Postives = 50/50 (100.00%), Query Frame = 1


		  
Query: 7   EFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALMRLAEMDYCGTTR 57
           +FKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALMRLAEMDYCGTTR
Sbjct: 95  KFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALMRLAEMDYCGTTR 144

[Close]

BLAST of Spo02647.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QEK5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_187860 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.500e-7
Identity = 32/40 (80.00%), Postives = 34/40 (85.00%), Query Frame = 1


		  
Query: 5   ITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALM 45
           + EFKAVTKEICKLPSFFS VLFQKIDVNGT FVT  A +
Sbjct: 165 MNEFKAVTKEICKLPSFFSTVLFQKIDVNGTGFVTRDAFV 204

[Close]

BLAST of Spo02647.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E4I4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g096520 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.000e-6
Identity = 30/40 (75.00%), Postives = 33/40 (82.50%), Query Frame = 1


		  
Query: 5   ITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALM 45
           + EFKAVTKEICKLPSFFS VLFQKIDVN T F+T  A +
Sbjct: 165 MNEFKAVTKEICKLPSFFSTVLFQKIDVNSTGFITRDAFV 204

[Close]

BLAST of Spo02647.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BAW5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g096520 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.000e-6
Identity = 30/38 (78.95%), Postives = 32/38 (84.21%), Query Frame = 1


		  
Query: 7   EFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALM 45
           EFKAVTKEICKLPSFFS VLFQKIDVN T F+T  A +
Sbjct: 168 EFKAVTKEICKLPSFFSTVLFQKIDVNSTGFITRDAFV 205

[Close]

BLAST of Spo02647.1 vs. UniProtKB/TrEMBL
Match: B9IPA8_POPTR (Calcium-binding EF hand family protein OS=Populus trichocarpa GN=POPTR_0019s03640g PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.900e-6
Identity = 28/40 (70.00%), Postives = 34/40 (85.00%), Query Frame = 1


		  
Query: 5   ITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALM 45
           I EFK+VTKE+CKLPSFFS VLF++IDVN T+FVT  A +
Sbjct: 164 IHEFKSVTKEVCKLPSFFSTVLFRRIDVNSTDFVTRDAFL 203

[Close]

BLAST of Spo02647.1 vs. ExPASy Swiss-Prot
Match: 2AB2B_ARATH (Serine/threonine protein phosphatase 2A regulatory subunit B''beta OS=Arabidopsis thaliana GN=B''BETA PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.100e-6
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 1


		  
Query: 5   ITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALM 45
           I EFK VT+EICKLPSFFS  LF+KID+N T FVT  A +
Sbjct: 161 IQEFKLVTREICKLPSFFSTSLFRKIDLNNTGFVTRDAFI 200

[Close]

BLAST of Spo02647.1 vs. ExPASy Swiss-Prot
Match: 2AB2C_ARATH (Probable serine/threonine protein phosphatase 2A regulatory subunit B''gamma OS=Arabidopsis thaliana GN=B''GAMMA PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.100e-6
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 1


		  
Query: 5   ITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALM 45
           I EFK VT+EICKLPSFFS  LF+KID+N T FVT  A +
Sbjct: 161 IQEFKLVTREICKLPSFFSTSLFRKIDLNNTGFVTRDAFI 200

[Close]

BLAST of Spo02647.1 vs. ExPASy Swiss-Prot
Match: 2AB2A_ARATH (Serine/threonine protein phosphatase 2A regulatory subunit B''alpha OS=Arabidopsis thaliana GN=B''ALPHA PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.200e-6
Identity = 24/39 (61.54%), Postives = 31/39 (79.49%), Query Frame = 1


		  
Query: 7   EFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALMR 46
           EFK++TKE+CKLPSF S VLF+KID +GT  VT  A ++
Sbjct: 166 EFKSITKEVCKLPSFLSSVLFRKIDTSGTGIVTRDAFIK 204

[Close]

BLAST of Spo02647.1 vs. TAIR (Arabidopsis)
Match: AT5G28900.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 54.3 bits (129), Expect = 6.200e-8
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 1


		  
Query: 5   ITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALM 45
           I EFK VT+EICKLPSFFS  LF+KID+N T FVT  A +
Sbjct: 161 IQEFKLVTREICKLPSFFSTSLFRKIDLNNTGFVTRDAFI 200

[Close]

BLAST of Spo02647.1 vs. TAIR (Arabidopsis)
Match: AT5G28850.2 (Calcium-binding EF-hand family protein)

HSP 1 Score: 54.3 bits (129), Expect = 6.200e-8
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 1


		  
Query: 5   ITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALM 45
           I EFK VT+EICKLPSFFS  LF+KID+N T FVT  A +
Sbjct: 161 IQEFKLVTREICKLPSFFSTSLFRKIDLNNTGFVTRDAFI 200

[Close]

BLAST of Spo02647.1 vs. TAIR (Arabidopsis)
Match: AT5G44090.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 52.8 bits (125), Expect = 1.800e-7
Identity = 24/39 (61.54%), Postives = 31/39 (79.49%), Query Frame = 1


		  
Query: 7   EFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALMR 46
           EFK++TKE+CKLPSF S VLF+KID +GT  VT  A ++
Sbjct: 166 EFKSITKEVCKLPSFLSSVLFRKIDTSGTGIVTRDAFIK 204

[Close]

BLAST of Spo02647.1 vs. TAIR (Arabidopsis)
Match: AT1G03960.1 (Calcium-binding EF hand family protein)

HSP 1 Score: 49.7 bits (117), Expect = 1.500e-6
Identity = 22/41 (53.66%), Postives = 31/41 (75.61%), Query Frame = 1


		  
Query: 5   ITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFVTSVALMR 46
           + EFK++TK++CKLPSF S  LF+KID N T+ VT  A ++
Sbjct: 155 VDEFKSITKQVCKLPSFLSPALFRKIDPNCTDIVTRDAFIK 195

[Close]

BLAST of Spo02647.1 vs. TAIR (Arabidopsis)
Match: AT1G54450.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 47.8 bits (112), Expect = 5.800e-6
Identity = 21/34 (61.76%), Postives = 26/34 (76.47%), Query Frame = 1


		  
Query: 5   ITEFKAVTKEICKLPSFFSIVLFQKIDVNGTEFV 39
           + EFK VT EICK+PSFFS  +F+K+D N T FV
Sbjct: 161 LQEFKLVTTEICKVPSFFSTSIFKKVDTNNTGFV 194

The following BLAST results are available for this feature:

BLAST of Spo02647.1 vs. NCBI nr
BLAST of Spo02647.1 vs. UniProtKB/TrEMBL
BLAST of Spo02647.1 vs. ExPASy Swiss-Prot
BLAST of Spo02647.1 vs. TAIR (Arabidopsis)

BLAST of Spo02647.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902204654\|gb\|KNA14936.1\|	2.8e-18	98.0	hypothetical protein SOVF_1027...	[more]
gi\|902153503\|gb\|KNA05704.1\|	2.2e-7	80.0	hypothetical protein SOVF_1878...	[more]
gi\|731366217\|ref\|XP_010694949.1\|	1.4e-6	78.9	PREDICTED: serine/threonine pr...	[more]
gi\|731366219\|ref\|XP_010694950.1\|	1.4e-6	75.0	PREDICTED: serine/threonine pr...	[more]
gi\|743880858\|ref\|XP_011036317.1\|	4.2e-6	70.0	PREDICTED: serine/threonine pr...	[more]

BLAST of Spo02647.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R601_SPIOL	2.0e-18	98.0	Uncharacterized protein OS=Spi...	[more]
A0A0K9QEK5_SPIOL	1.5e-7	80.0	Uncharacterized protein OS=Spi...	[more]
A0A0J8E4I4_BETVU	1.0e-6	75.0	Uncharacterized protein OS=Bet...	[more]
A0A0J8BAW5_BETVU	1.0e-6	78.9	Uncharacterized protein OS=Bet...	[more]
B9IPA8_POPTR	2.9e-6	70.0	Calcium-binding EF hand family...	[more]

BLAST of Spo02647.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3


Match Name	E-value	Identity	Description
2AB2B_ARATH	1.1e-6	67.5	Serine/threonine protein phosp...	[more]
2AB2C_ARATH	1.1e-6	67.5	Probable serine/threonine prot...	[more]
2AB2A_ARATH	3.2e-6	61.5	Serine/threonine protein phosp...	[more]

BLAST of Spo02647.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G28900.1	6.2e-8	67.5	Calcium-binding EF-hand family...	[more]
AT5G28850.2	6.2e-8	67.5	Calcium-binding EF-hand family...	[more]
AT5G44090.1	1.8e-7	61.5	Calcium-binding EF-hand family...	[more]
AT1G03960.1	1.5e-6	53.6	Calcium-binding EF hand family...	[more]
AT1G54450.1	5.8e-6	61.7	Calcium-binding EF-hand family...	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding