Spo02740.1 (mRNA) | SpinachBase

Overview


Name	Spo02740.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	RNA-binding protein
Location	chr3 : 16862199 .. 16874298 (-)
Sequence length	2819

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAAAAAAAATAAAATTCATGGGTCCCAACATACTGTCCCAATCAATCCAAGCAACACCAATCCAATCAAAATCAAACTTAATCCATTATTCATTTTCCTCCAAAATAAATAAAAAAATAAATAAAAATGCACTAGAAGCCATAGTGGGACCCACCTCCACTCCCCTTCCCTCAACCCCTTCCTCCAGCTTCGCCGTCTTCTCTCTCCTCCTTATAAAACCCCCTATCACGGTGTCGAGATCTTTCTCCGCCCCGATTTTCTCTCTCTATTGTCTTTTTCTCTCCTCTTTTATTTTTGCGTCTTTCCCTTTTCCAGGGGGAGTCAATCTCTCTCCCCCTAAATCCCGCGGAAACCCTAACAATGGCGGATGAAACCTCTGGAAAAACCCTAGTTTCTACTCCATCACTCCCAGATCAACCTCAATTGAACGATTCGCTGGTGGTTGAATCCGTCTCCACCGAAGATGCTTCCACCGTATCCGCCGCCGATGCTTCTACCGTCTCCGCGGCCGATGTTTCCATCGTCTCCGCCGATGAAGACTCAGGCTCGTTGTCTCGGAACTCGTCGTTTAGTAAACTGAACGCAAAAGCGCCGGAGTTTGTGCCGAAGAAGACTCATCCTTCGCCGCCAAGTTCCGTTACTGGTTGTAGTGGTGATCCTAGAGTGATGATCATTTCTCCGTCTCCTTCCCCGCCTCCGGGGTTGGTTCATGGTTATCCTCCGCCGCCTCCGCCGCAGGTCAACTTGCCGTTTCCGGTGGTTCCTTTGCCTCCCTTGAATCATCACCATCATCAGACTCAGCAGCAGCAGCAGAATCATCATCAACATCATAATCAGAATCATCATGATCATCCACATCATAATCATCGGAATGATTCGCATCGGAACCATCATCAGAAGCATCATCGCGGTGGGGATCAGCAGGAGGGAGTGGGGCAGCAGGATAAGGATCATGGACAGGGTAATAATAGTGGTGCAAAAAATAATAATGGCTTGTCCGACAATCAGAAACTCATCAATCAGGCATGTATTTGCTACTTTCACATACACAATTTTGTCCCCTTTCCCTTGATTTGTGGTAAATTAGTTCGGTATATGTATGTCATCTGCTGGCGCAGTTTGCATAACATTGAGGTAAGGAAAAGTGTGCTTCTCAGTTGTGTTCCAGTATTGTGAAAATGTGGATATCGTGTTTTGGGTGGCATTTGAGGCTTTGCTTGTTCACTCATTCATATAATTTTGTATGAAGTTGGGTTCGTAAGGGGAACATTAAAATTTCCACCAATAATGACTTAGTGGTCATCAGTGGAAATGAGGATTTTTTTGCTAGAAGATTCCTTAACTTGTGTTGTGGATTGAATTAGGACCTAACGGCATTTTTCTTGCTTAGAAATCTTCTAGGTTAGAAAATTTTGATGCGGAGAAATTTAAACGTGCAAGAAGGTTGTTGTGGAAAAAGTCAAGCTGCAATATTTTTTGTTACTCTGTATATAACTAGCAAATATAGACATACTAGCGTAGGTACCAAAGTTCCACACGACAATGTTTGGGCTGGGCACATGTTATGTGTGAGTACGAATGCCATGGGTGTATGCTACAATTGTGCACAAGCATCGTTAGGAGAATAGTCTTGGAAATTTGTGGTGGTCTCCAAAAATAGACAAACAATGGACTTCCTTGGCAATGATATATTCTCATTCTCAATTCTATCGATCGATGCTTCTCTATGGGAAATATTTAATGTGTTGGAGGGAGTATGATTGCCAATTGTAGATTATATTCTATAATTTCAATGTGTAAAAAGCTCCAAAGACTTTTTGTATAGATTTAGGCATTTAACTCATTACCCTATTCAGTTCATTCATTTTTTCTTACGCGATGTTGGTTAAGTGGCTTCCGTAAAATTGAGCAGGCTTGTTGCATTTGTAGAAGATGACATCAGGTCTGCATTCCGCAATTAGCCATATGTATGTTATGGTTTTGGTATAGAGCTGGTGAACTTGGTATAGAATAATAGGGGTCGGGTTCGGGCCAAAGAGTCCCAAAGTGGTATGGGATTTTAGTGTATTTTAGTTAAGGGCTGAACCTGAGACCAAGATCAACTTTATTTTGGTAGTATTTGTTAAGTGCTAATTTGTAGTTGATCAACTTTACTTTGGTAGTATTTTGTTAAGTGCCAAGTCTGCTAACTTGGAGTTGATGACCTTCTAGAATTCCCCTCCCCTAATAGACGAGAGCCCTTCTGGATGGCACCAAATATGCTTAGCTTATGTGGATTTGTGTTAGAGCCTTGAGATATTACAAGGCGGGTGTTGCTCAAGTTTTGAAGGTTGTAGGTGATCTATGTAGCTTTTGTGAGAAGAGATTATTTGATAAGCACTGCCTTCTGGGTAAAGGGCCTTCGTATTGGACGATTGTGTGCACGTGGTTTGTGCTCATGGGTTGGTTCATTGGATGCTGATTTATTCTTGAAAATATAAGTGTGACCATGCAAGATCATGAGAATCATAAGTTCAGGTATGGGCTCAAGTAGTGTTACATGTAGCTATGGCTGGCTTGAATTTTTCTTGGTACCGACACTTGGTTTATGTTCGATTAGGTGAGATATTTATGAGGCAAAAGTATGTTAGTATGGTAGATTTATACAAACATAGGTGGATTGTGGATAGACATAGTTGTTGAAGAGTTGGCATAACTTCTGTGCTTCTTTGGGTAGGGACATTCATATAGTTCAGCGCTCATATTGCGCAAGGTTGAATCGTTAGAAAGCTTACTTTGGTGTGGGTTTTGAGCAGGATTGCATGGACCAATGCCACTTGGTCCACAAGTCAACTTGTGTTGGTTGATTAGATTTATCTCGGATCAACCAGTAGGCTTTCTATTGCACCTTGTCTATTTTAGCTTTGTTAGATATTTGATATACTAAAAACACATCTTTTTGCCATATTGGTATAAAAAAATTGTCAATAACATTGGTATTTGATGTAATGAGAGCCACATAGTCTCATTTTTGGTTCGTAAATTTCACTTGAAATGTACAACAATATCGTGCATATTTTTCCTATTTTTGTCCAACTTATGACTACTAAACTTTACATTTTCCATTTCTCCACCCTCACAATTGCAGTAATAAAAGCTACATCTACACAACACCACCAGTAGTCCAGTACTACATTCATTATTATAATTTCGGTAAATCTTACTTTGTAAATAAAACTATGGAAGAAGACGGGAAAGAGGGCCAGGAGATGATGTCGCTTCTGTTATTAAATACTGTTGCAGTTGATTCATTGAGCAGCCTACAGGATATCATGGGTGATGGTTTAGGGCTGCTGGGCTGGTTATTTTTGTGGTGTTGTCATTGATGTAAAAAAATCAATATCAGGGAAGGTCTTCATTGCTACATCTTCCTTGAGAAATTCATCCAATTGACCCATGCTCAAAGGGGGAGCGTTGGTCTTTAGGAGTTTGGCTAACGGTTGTGTTAGATAGGTTTCGTGATGGTGAAATCGTCTGTCTGAGGAGGGACTGTTTGGTTGTAGGCTCAAGAGTCTTTTCCATGCATAAACACAATTAGTGAGGGTGGATAATTGGTAGGGTCTTGTGGAACAAATGAATGAAAATAAATTTTCTAGTCGTGAGAGGAGGGAGAATGGGGGAAAAGGAAAAAAAGTGAAGTGTAGTTACCACCAGTTGGACATAGGAAATGAAAGCAAGCAACTCAAGCACCCAATTTTGAATTTACCAATATGTTTGGCGGTTTTTTTATACCAATATGGCAAAAAGTTTTTTTTTAAATACCACTTTATCTAATTTTTCGGATTAAGAAGAGTTTTGTTGAGTTTTTATATTTTAAGTATAGAAGATATCCACAAGGGATAATGTAATTTTTTATCTTTTAAAACCAAAGGAATTCCCATTGTCAAAATTAGGTAAAAGTTGTAATAAAAAATAATTGATAAGGGAGCTATTGGATATTATTCAGTATTGCAATGCATTAAAGAAATGCAAGTTGATAAAGCATGTAGAAAATATGCATATATGTGATAGGAGAAGCCTGTGATCAAGAATGGATCTTCGTCTTGCTTTATTGCAATTTGTGGCAAAGCATGTTTGCCGATGTCTAATAGTCTGGAATGCGTGAAGTCTAACTCAATATAGGAATATTTAGGGTTTGCACACTTGGTAACAATATGGGATCTTATTCCAAAGTCACCCGAGTTGTCAAGTGGGAGTTATATAGGCTTGAGGCTTGACACACACATCATCGAAGCTTATGTGAGAAGCTGATCAAGTAATCTTAAAGAGCATTGTATTACGAGGTTGAAAGGGCATTGACCATGAGACAATGTTGCTTGGAGGTAAGTGTGGTATAAATTTGTTTGGATCTAGTTAGCATGATATGGGTTGGTTTTGAATAGGTTTTGAGCATTAGAAATGGAAAGAAATAGCATAAGAGAGAGGGGAAATGTTTGATGTTTCAACTATTGTCCAAGTCTTGAGAATGAGGTAGTTACATCATTCCACTACCTTCTGTGCGTAGTATTTTCTTATGAGAAGTACAACAAGAGGACAAGGTGTCCTAAAAAACGTGACTATATTATTCTTTGTATTTTAGGGGGTGGTATGGTTCTCTTACTTATCTTGAAGAATGTGACTTCATTCCTGTATATATTTTGTTTTGGTGGGAAAAGGCTGGTAGGAAGATGAAGGAAACTGCACTTGCAATACTTGAATTCTGATGAAACTAGCGATAATATCTTTTTTGGTCAGATAAGAAACAAGAAGAGTTCTTTAATCATCATAACTCTTCTCTCCATGGATTTTTTTTTCTTTGGCCCTAATCATCAGCCTTGTTTGGGATAAATTGGCTGTTGGGTGCAATCTTTTTACACAAAGGATGTTTTTGTGGATTGGAAAAGAAACAAGAAGAAATGCTGGATTTCTAATATGGGGAAGCTGCACTTAGAAGAAAGAAACAAGCTAATGCAATTTTGAGGTTACTCGTGTCAAGGTTTGAAGTTTTGTTTTTGAGGCTATTGTATTGCTGCCGTCAAAGTGTTATCCGACATTTTTTGGAGGCTATTGTATTACCCGGTGTCAAGGTTTTATGTTCTGTTTTTGAGGCTATTCTTTTTGTTTTTTTTCAACTTATTTTTACGTTTGATTATTTTATAGCCACGTTGTTAGTTTGTTACATGGTAGTTGGAGTATAAGTTCAAGTTCCAGTTGCTGAGGATTTTGTGTAGCTGAAGTCTCCTTTTGAATTTTGTGTTTTACTTGACATTTTATTTTTGTTTAGATAAATGGCTCTTCAATAGCTCTAGGCCTCTACGGCATAGGCCTTCTTTTCTAGCCCGCTTTTTGTAGTGGGTGATACCCTCTTGCCTCTTGGTATCTTTCTACTATAATTTGTTACTTGTATATATAAAAAAGTTGTTACGGGATAGCTTATTGACCTTTTTCTCAACCATTGATGAGTAGCAAAGATGGTTAGTTATACTTTGATTGGTAGTAGTTACCCTATTAGACGATATTTTATTCATATGTACAGCTACTATGTCACTGAATAGAGAGTAACAGCAAACTAATGTTTTCAAGTAAGGGGTACTAAACTGAATGAAAGGAGGGATATGTCCATTTAAGAGTCACTGCCTCACTGGTACTATAGAGGGATGTGCACAACCCTTTTGTCACCATTTGCGCTTATGCCAACTTGCAAGTACTTAATTCTTATGCTATGAGTAGTCTTAACTCTCTTGTAGGTTATGTTATTTTTCTTCTAAATAAATTTCCTTGTTATAAGCAGCCTGTAGCACATTTTTTTGTTTGGTTCTTCACAGTCTAACAAAAAAGCACATTTTTAGGTGGAGTATTACTTCAGTGATGTGAACCTGGCTACTACTGATCATTTAATAAGGTTCATCAACAAGGATTCCGAAGGATTCGGTATGACCGTGGTACCTTTTAATTATCTGTTTTATAAGAGAGATCCAAACGCATGTAAATATTTGAACCGAAGATGTGCATTTTTGAGCCCAATATATATATGTGTGTGTATATTTATTGTTTTACTGAATTAACCTCTTGTTAAATAAAAGTTAGCTTGATAAAAAAAAAGGTGCACATTTTGTTAATAAATAAATGCATCTGATGAGAATGTTGCACAATTTTGTTATAAAAATAAGCACATGCAGATTAAAAATATGCAAAAAAAAATATCCTCCACGTCCCTTCTAGCATATATGTAGGGAACAACTAGAATGAGAAATGCGAAAACCAACCATAAGTTGCCACGTGGCATGAATATTACATTACAATGACTACCCTATTTTTTCAGATGTTTTAACTTGTAAACAATGTCCGTCTTTTCTTTTCGGGCCGTTATCTGGTATACATGCATAGGTGTTGATATGACTCCAATTCTGTAATTGCTAACATTGAGTGTTTAGGTTTGTTGGACCGCGGACTTTACAGCCTCTCCACAGTCCACACTGTTTACCAACTTCAATAAGTTGTTCTTATTATGATGAATGTCAATCTTTTGTTGCTCATGTGTTGTAGAATTTCCCTAGATGTTCTTTTTTCCCTTTTATTTATCTTTTTGCCTCTATGAAGTATCCTGCTCTCCTGACATTTTCCTGGTTACAATCCATATGTAGTGCCGATATCTGTGGTTGCGTCTTTTAAGAAGATTAAGGCTCTCATAAACAGTAATTCTCAGCTTGCAGCTATACTAAGGAATTCAACAAAGCTTGTAAGCCCGCATTTGTCTTGATAATTTACTCTCTTTGTTTTCTTCAGTTGTATTTTGTATTCTAACCCATCCTGTTTATTATCGATCATACTAATCTTTCTTGGCTGTCTGTATTCTCAGGTAGTTAGTGAAGATGGGAAGAAAGTGAAGCGCTTGCATCCTCTAACTGGGTCTGATATGGAAGAGCTGCAAGTACGGCTTTAATGTCTAGACTTCTGTAGGTTCTTTGACATCCAATGATTCTGACCTATTTGCATTCATGTTTAGGCTCGAATTATCGTGGCTGAGAATTTACCTGACGATCATTGTCACCAGAAACTTATGAAGGTTTTTTCGGCTGTGGGGAGGTACTGGTTTTTTTGTTTTTTTTTAAACTTTAAATCAGGTGTTCAGATATTTCTTACCGTACTGGAGGAAATGATACCTCTGTTAGAATCCCGTTAATGACACACTTTGGGATTTATATGCTCTACATTACGCGGCTGTGTTGGGTTAACTGCTGCAATGCATGGTACTTAGGAGGCCCACCATACCAAGAGGTAGACTTCAGGAGTACACATCTCTGTGGAATTTATGAAATTAAGTGATAAAATATGGAGGATTCTAAAGTGCGGATGGGAGATTCTTTAGGAGCTTTTTCTTGCAAATCTTTCCTAACTTATTTGACTACACCCAAAAAAAAAATGTGTCCCTCCCATTAGCAACCATCATCTGGAAGGCAAAGGTTTCTTTAAGGTGAGAGAGTTCTGTGGACTATTAGTTTTGGGACGGATCAAATGATGAATGCAGCCTATATTTTTTCCAAAAATGGAGGCCGAGCTTGGCTATCTCACCAAATATTTGTTTGTTACGTGTTTTCCTTCATTGTGAATTGGCATGCTGAGACTTATTGCGATGTACGACGAGACTTGGGCCTTCAAGTACGCTTAATGGTTACGGATTAGCTTGTTATAGGATAAAGTCACCTTGTTAGCTTCTTTATGGGCTAAGGTGGCTGGGGTTTTCCAAATAAACTTTATCGGAGAGACAAGGGAATTGGGCTGATTAATATTTTTTGTTTTCTATAATCTGTTGTGACTTGTTACTTTGTTAGGACACCTTTTCCTCCTGAATGTACTTTTGTTTCTGCAGTATCAATAAATATGTTTTTGTATGGAAGTAAGTACTTTGTAAATTAAAATAATAATACAACTATGGAGTAAATCATAACACATCAGTAATACCAAGTCAGTTAAACCATCTTTCTCGGTTTCTCCTAACTAGCAAGACTAGTAGAGAACATGAGTGAAATAGTGATAATTTGGAGAGGAGGATAGTAGGTAAAGTAAATGTGTCTAGAATCTAATTGAACTTTTTCCTCTTTCTCCAGTGTGAAGAGTATTCGTACCTGTCAGCCCCAACCTTCCAACAATGGTACTTCCTCTGCATCTAGGCCGTCAAAAACTGATAATATGCTCTACTGCAACAAGGTATATTTCAATGCAATCTACGCTTACCGTGATTTCCATTTCTCTTCATTTTTTAAAAAACGTTTTTGGGGTATATGTAAGCCTTTATTCTGAGATTTCAGCTTTTCAAGTTACCTTGTGACTGATACTATTACTTGTCGAATGCTCTTTCGGATCCCTTAATCCCCTCCAACCAGAGGCACTGATAAATATAGATATAAAAGAAATACCAGAATAAACTGGGTAGGGATCTTACATCAGAAATACTATAATACGGATTTTATTCTGAACTATTAAAGGTAAATAAAGTGAGTAGATCTAATCTGTGGACTGTGGCATCAATTGAACATTGTAAAGTGCATAAGATTTGAAATGTGTTCAATGAAAGTTACTGGTCACATTGTTAACCTGGCATTTTCTCAGATCTGGTGCGCTATAGTGGCTGTTATTGTGATTGACGATTTTGTTTCTGCTGTATAGTTGCATGCGTTTGTGGAATACGAATCAGTTGAGCTGGCTGAGAAAGCGGTATGAAATCTGGTCACCTTCCAGGTTTTTTCTCATGGAGAAAACCCGCCTTTTCCTTCACTTTCTACAGTTGCTTGTAAGGAAATAAACTATTTACTTTTTGCAGATTGCTGAGCTGAATGATGAGGGTAACTGGAGGAATGGCTTAAGAGTTCGCTCACTGCTTAAGCCCGGGGTATATGTTTCACAATACCTTTTTTTTTTTTAAAAAAGATTCCTCTGAAAAATGTGTTCTGGAAGGGTGCAGATCCTAGGCTTAGAAGAACACATTATGGGTTGTACTTTAATGCCTGATTATGTTACAGAGTAAAATTATCAATTGCGTGCTTGAGGGAAGCTCTGTGAGTGAAAGAGTCTGGCTGTTATACTGCTAAGCAGCTACAGATTTGTATTTCCGTTCCATAATTTTTCCGTCTTTTACTTTTATTCCTAGTTTGGAAAAAAAAAAAATTTGTCCTCATGAAAACAATTTATCTCCCCGATACAAAAGTGCAAAACGAGGACCTACATTTCACTTTTTTTCTTGGTCTTTGGAGCTACAATGAGTGGCAAGAACAATATGGAATAGGAGTAGTTACTTGATGGACTCGGATAACACCTGAGCCCTGACGGCCACCTGTAAAAAGAAAACCATGTTTTCCAGTATGTTATGCTGTAAAAACAAGACGATTCACATATTTTATGTACGATTATCCATTTAAAAGATGCAAACTTTTAATTTACAACATTTGTTGCCTTCTGTTTTTCAGCATGGAAGAGGTATATTAAACTTTAAAATAATAGATGTCTCCCTGTGATTTTAGTGCTATATTTTATGTTAGTTTCCTGGTTTTCTGATACTAATTTTTGTACTTTTTGCGGTTGTCAGTCTAAGGCTGCACCAGCACGAGGAAAGAAATCTGGGAATGAAGGTGAAGTGACATGTGAAGAAGAGGATGTATCCACATCTGAGCAGAACCAGAATGAGAAACAATCAGAAAACCTTTCCAAACAGTCTGATGTCCAAGCTTATGAGCAGGTATGTGTTCTTGTCGTTGGCATTACCTAGACAAAAAGAAGCTGTTTCTTCTTTTCGACTTCCTTGAGAGTGTCCTTTTATTTTCTCTCAAAATTCATGATGTACTTTGAATAATTACATTGCTTTATCAGTTCAAATTTTATCGTTAGAATTTTGTCAAAAAATACCTTCATTATACTGCCTCCGTTTTTTAAAGACCTTTCCTTGAATTCCTACTTTCCGTTTAAAGTGTGTTTTTCAAAGATCTTCCTTATTTTGCTTTAACCCAATGTTGGCAAAGAAAATCCTCTCTTTTATCCTTTGGTGTCTATTTGTACAGTAACAAGAAAGGTCTTTGGGAATCCGAGGGAGCATCATTTTTATAAAGTTAGTTAATATTAGCGCAGTGGTAAGGTTGGGTATATTGGTTTCCGGACTTTCTAAAATTCATGAGGTCATTTCTAAAGTCCATTTTATCTTGAAATGCTTCCTCCATTTTAAAATAAAGGACATATGAGTTTTTCAGTGTTTCACGCATTCTCCAATATGCTTCCTTGTTTGTCCTTCTTTTTTCTTCTCATGAGAGTCATGACTAGTTGGTGAATATGAAGTGCATAAAACCAAGGATATAGTAATCAATTGATATGAAATACTCTATATTTTCTTTTAATATAAGAGCTCAGCTCCTTAATATGGGAACTCTATAGTATAAAACCGAGGAAGTACTTCGTCTGTCATACTGTTAGATATAAATAAATTTTACGCACTCCTAGAATTTTTCTATCTATATTTACTTCCCAATTTTTAATGGCAAGTTCTCGAATGCTGCTACTAGAAATCATCATTGTTCTTTTGGTGCATAGTTTGATTTTTATCACTTTATCTCAGAGCTAAACTTGTGTGCATGTCACCAGTGATTCCACTTTTGTTTAAGCATTCTTTAGTCTGCTTTATGTTTTTGGATGTCTCAAATGCACCAAATCCATGGTCTTGTTTTGATAACTGATCAAGTTGGGCATGGCAATGGAATTGGAATAATCACTCTGTGAAATCTAATTGACACATGGGATTTTACTAATTTTTATTTTTGTCCAATGTTACCTCTTTCTTTTCCATTTGAATTTTCCGTATCTTGCTGGTGTGTTCATAAAGTCTTTTATCTGGCCTTTTGGGCCTATCCTGTCTACTAAGATGCCAAGATACATCCGGAGTAGTTTATTACTCATTTTCTTTTAGAAGCTGATGATTAGAGCTTATTGGCATTGAACAGGGAGAAGAGCAAAGCTTGGAAAAAGATGGTGGGCAAAAAAAGAGCCGGAATCGGGGTCGCGGAAAGGGTCGTGGAAGGGGTCATCATCAGAATAATAGGGGGCACCACGTGGGGTCCCCCCCTGTGAACAATTTTATGAACGGCGAGCACCCTGTTGTAGCAAAGCAGCAGCCTCCTGGACCTCGTATGCCTGATGGAACCAGAGGGTTTTCCATGGGCAGAGGGAAGCCAATTGCAGTCAACATAACAGCTTAAAAAATAAGTCTCCTTCCCCCACATATGATTATTGAGTTGTTCAGTTTCGTGTGCTTCTGATGTCTGATGTCTGTGTGCTGAGTGTTGGGTGCTTGTGAAAGGGGAGTTTTGCCGCTCTCTTTATGAGTTAATGGCAGGGTTGTAGAGCAAACTATTAGTTTGTCTTTTAATCCTATATAGTGCTTTTGAGTGCCATTTGCTTCCAGCAAAAGATGATGTCGAAAATGTATTGTGCCTATTTGTTCTTATGAAAAAAAGAAAGTAAGATGTAGAAAGCAAAACCAAGAACCTCGGATTATATACGTGTAGAGATGTGAATGAAGAACTTGCAAATGAAATATGCAATTCATGTATTTGTGGCCTCTCTCTTTTCTAAATTTTGTAGAGATAGCAGCCCTTGGGAAGCTCATATGGAAAGGGCTACTTGTCCTTGGCTTTTAAAGGGGATTTGGCCCTTTGACCCTGGGTTTGTGATAAGCAATGTACTACTAAATCTCCCCTTAACCTCCTAAGAAGAGATAAGTTCAAATGGCTATACTATACATTTAAGCACCATTTTCCACATTGGTTGTATAGAACATAAGAGACTGACATTTCAGCTTTTTTGTTGACATTGTTCAAAATTTGCTCAGTGTTTGCCTTTTATTTTATGTTTTTATTTATTCGTGAAATGTACTTGGTAGTTTGTTGAAGTCATTGTGAACGAAAGAAACTTTCACTTTTTGATTCATATTAATCCTGACCGACTCAGTTGGAGCAATGGAACATAAACTAAAATGCTAGGAACCAGTTTGGTGAAGGAATCACCAATTCACCATACATGCACTCTGCAAACATGCTCCAT

mRNA sequence

TCAAAAAAAATAAAATTCATGGGTCCCAACATACTGTCCCAATCAATCCAAGCAACACCAATCCAATCAAAATCAAACTTAATCCATTATTCATTTTCCTCCAAAATAAATAAAAAAATAAATAAAAATGCACTAGAAGCCATAGTGGGACCCACCTCCACTCCCCTTCCCTCAACCCCTTCCTCCAGCTTCGCCGTCTTCTCTCTCCTCCTTATAAAACCCCCTATCACGGTGTCGAGATCTTTCTCCGCCCCGATTTTCTCTCTCTATTGTCTTTTTCTCTCCTCTTTTATTTTTGCGTCTTTCCCTTTTCCAGGGGGAGTCAATCTCTCTCCCCCTAAATCCCGCGGAAACCCTAACAATGGCGGATGAAACCTCTGGAAAAACCCTAGTTTCTACTCCATCACTCCCAGATCAACCTCAATTGAACGATTCGCTGGTGGTTGAATCCGTCTCCACCGAAGATGCTTCCACCGTATCCGCCGCCGATGCTTCTACCGTCTCCGCGGCCGATGTTTCCATCGTCTCCGCCGATGAAGACTCAGGCTCGTTGTCTCGGAACTCGTCGTTTAGTAAACTGAACGCAAAAGCGCCGGAGTTTGTGCCGAAGAAGACTCATCCTTCGCCGCCAAGTTCCGTTACTGGTTGTAGTGGTGATCCTAGAGTGATGATCATTTCTCCGTCTCCTTCCCCGCCTCCGGGGTTGGTTCATGGTTATCCTCCGCCGCCTCCGCCGCAGGTCAACTTGCCGTTTCCGGTGGTTCCTTTGCCTCCCTTGAATCATCACCATCATCAGACTCAGCAGCAGCAGCAGAATCATCATCAACATCATAATCAGAATCATCATGATCATCCACATCATAATCATCGGAATGATTCGCATCGGAACCATCATCAGAAGCATCATCGCGGTGGGGATCAGCAGGAGGGAGTGGGGCAGCAGGATAAGGATCATGGACAGGGTAATAATAGTGGTGCAAAAAATAATAATGGCTTGTCCGACAATCAGAAACTCATCAATCAGGTGGAGTATTACTTCAGTGATGTGAACCTGGCTACTACTGATCATTTAATAAGGTTCATCAACAAGGATTCCGAAGGATTCGTGCCGATATCTGTGGTTGCGTCTTTTAAGAAGATTAAGGCTCTCATAAACAGTAATTCTCAGCTTGCAGCTATACTAAGGAATTCAACAAAGCTTGTAGTTAGTGAAGATGGGAAGAAAGTGAAGCGCTTGCATCCTCTAACTGGGTCTGATATGGAAGAGCTGCAAGCTCGAATTATCGTGGCTGAGAATTTACCTGACGATCATTGTCACCAGAAACTTATGAAGGTTTTTTCGGCTGTGGGGAGTGTGAAGAGTATTCGTACCTGTCAGCCCCAACCTTCCAACAATGGTACTTCCTCTGCATCTAGGCCGTCAAAAACTGATAATATGCTCTACTGCAACAAGTTGCATGCGTTTGTGGAATACGAATCAGTTGAGCTGGCTGAGAAAGCGATTGCTGAGCTGAATGATGAGGGTAACTGGAGGAATGGCTTAAGAGTTCGCTCACTGCTTAAGCCCGGGTCTAAGGCTGCACCAGCACGAGGAAAGAAATCTGGGAATGAAGGTGAAGTGACATGTGAAGAAGAGGATGTATCCACATCTGAGCAGAACCAGAATGAGAAACAATCAGAAAACCTTTCCAAACAGTCTGATGTCCAAGCTTATGAGCAGGGAGAAGAGCAAAGCTTGGAAAAAGATGGTGGGCAAAAAAAGAGCCGGAATCGGGGTCGCGGAAAGGGTCGTGGAAGGGGTCATCATCAGAATAATAGGGGGCACCACGTGGGGTCCCCCCCTGTGAACAATTTTATGAACGGCGAGCACCCTGTTGTAGCAAAGCAGCAGCCTCCTGGACCTCGTATGCCTGATGGAACCAGAGGGTTTTCCATGGGCAGAGGGAAGCCAATTGCAGTCAACATAACAGCTTAAAAAATAAGTCTCCTTCCCCCACATATGATTATTGAGTTGTTCAGTTTCGTGTGCTTCTGATGTCTGATGTCTGTGTGCTGAGTGTTGGGTGCTTGTGAAAGGGGAGTTTTGCCGCTCTCTTTATGAGTTAATGGCAGGGTTGTAGAGCAAACTATTAGTTTGTCTTTTAATCCTATATAGTGCTTTTGAGTGCCATTTGCTTCCAGCAAAAGATGATGTCGAAAATGTATTGTGCCTATTTGTTCTTATGAAAAAAAGAAAGTAAGATGTAGAAAGCAAAACCAAGAACCTCGGATTATATACGTGTAGAGATGTGAATGAAGAACTTGCAAATGAAATATGCAATTCATGTATTTGTGGCCTCTCTCTTTTCTAAATTTTGTAGAGATAGCAGCCCTTGGGAAGCTCATATGGAAAGGGCTACTTGTCCTTGGCTTTTAAAGGGGATTTGGCCCTTTGACCCTGGGTTTGTGATAAGCAATGTACTACTAAATCTCCCCTTAACCTCCTAAGAAGAGATAAGTTCAAATGGCTATACTATACATTTAAGCACCATTTTCCACATTGGTTGTATAGAACATAAGAGACTGACATTTCAGCTTTTTTGTTGACATTGTTCAAAATTTGCTCAGTGTTTGCCTTTTATTTTATGTTTTTATTTATTCGTGAAATGTACTTGGTAGTTTGTTGAAGTCATTGTGAACGAAAGAAACTTTCACTTTTTGATTCATATTAATCCTGACCGACTCAGTTGGAGCAATGGAACATAAACTAAAATGCTAGGAACCAGTTTGGTGAAGGAATCACCAATTCACCATACATGCACTCTGCAAACATGCTCCAT

Coding sequence (CDS)

ATGGCGGATGAAACCTCTGGAAAAACCCTAGTTTCTACTCCATCACTCCCAGATCAACCTCAATTGAACGATTCGCTGGTGGTTGAATCCGTCTCCACCGAAGATGCTTCCACCGTATCCGCCGCCGATGCTTCTACCGTCTCCGCGGCCGATGTTTCCATCGTCTCCGCCGATGAAGACTCAGGCTCGTTGTCTCGGAACTCGTCGTTTAGTAAACTGAACGCAAAAGCGCCGGAGTTTGTGCCGAAGAAGACTCATCCTTCGCCGCCAAGTTCCGTTACTGGTTGTAGTGGTGATCCTAGAGTGATGATCATTTCTCCGTCTCCTTCCCCGCCTCCGGGGTTGGTTCATGGTTATCCTCCGCCGCCTCCGCCGCAGGTCAACTTGCCGTTTCCGGTGGTTCCTTTGCCTCCCTTGAATCATCACCATCATCAGACTCAGCAGCAGCAGCAGAATCATCATCAACATCATAATCAGAATCATCATGATCATCCACATCATAATCATCGGAATGATTCGCATCGGAACCATCATCAGAAGCATCATCGCGGTGGGGATCAGCAGGAGGGAGTGGGGCAGCAGGATAAGGATCATGGACAGGGTAATAATAGTGGTGCAAAAAATAATAATGGCTTGTCCGACAATCAGAAACTCATCAATCAGGTGGAGTATTACTTCAGTGATGTGAACCTGGCTACTACTGATCATTTAATAAGGTTCATCAACAAGGATTCCGAAGGATTCGTGCCGATATCTGTGGTTGCGTCTTTTAAGAAGATTAAGGCTCTCATAAACAGTAATTCTCAGCTTGCAGCTATACTAAGGAATTCAACAAAGCTTGTAGTTAGTGAAGATGGGAAGAAAGTGAAGCGCTTGCATCCTCTAACTGGGTCTGATATGGAAGAGCTGCAAGCTCGAATTATCGTGGCTGAGAATTTACCTGACGATCATTGTCACCAGAAACTTATGAAGGTTTTTTCGGCTGTGGGGAGTGTGAAGAGTATTCGTACCTGTCAGCCCCAACCTTCCAACAATGGTACTTCCTCTGCATCTAGGCCGTCAAAAACTGATAATATGCTCTACTGCAACAAGTTGCATGCGTTTGTGGAATACGAATCAGTTGAGCTGGCTGAGAAAGCGATTGCTGAGCTGAATGATGAGGGTAACTGGAGGAATGGCTTAAGAGTTCGCTCACTGCTTAAGCCCGGGTCTAAGGCTGCACCAGCACGAGGAAAGAAATCTGGGAATGAAGGTGAAGTGACATGTGAAGAAGAGGATGTATCCACATCTGAGCAGAACCAGAATGAGAAACAATCAGAAAACCTTTCCAAACAGTCTGATGTCCAAGCTTATGAGCAGGGAGAAGAGCAAAGCTTGGAAAAAGATGGTGGGCAAAAAAAGAGCCGGAATCGGGGTCGCGGAAAGGGTCGTGGAAGGGGTCATCATCAGAATAATAGGGGGCACCACGTGGGGTCCCCCCCTGTGAACAATTTTATGAACGGCGAGCACCCTGTTGTAGCAAAGCAGCAGCCTCCTGGACCTCGTATGCCTGATGGAACCAGAGGGTTTTCCATGGGCAGAGGGAAGCCAATTGCAGTCAACATAACAGCTTAA

Protein sequence

MADETSGKTLVSTPSLPDQPQLNDSLVVESVSTEDASTVSAADASTVSAADVSIVSADEDSGSLSRNSSFSKLNAKAPEFVPKKTHPSPPSSVTGCSGDPRVMIISPSPSPPPGLVHGYPPPPPPQVNLPFPVVPLPPLNHHHHQTQQQQQNHHQHHNQNHHDHPHHNHRNDSHRNHHQKHHRGGDQQEGVGQQDKDHGQGNNSGAKNNNGLSDNQKLINQVEYYFSDVNLATTDHLIRFINKDSEGFVPISVVASFKKIKALINSNSQLAAILRNSTKLVVSEDGKKVKRLHPLTGSDMEELQARIIVAENLPDDHCHQKLMKVFSAVGSVKSIRTCQPQPSNNGTSSASRPSKTDNMLYCNKLHAFVEYESVELAEKAIAELNDEGNWRNGLRVRSLLKPGSKAAPARGKKSGNEGEVTCEEEDVSTSEQNQNEKQSENLSKQSDVQAYEQGEEQSLEKDGGQKKSRNRGRGKGRGRGHHQNNRGHHVGSPPVNNFMNGEHPVVAKQQPPGPRMPDGTRGFSMGRGKPIAVNITA

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo02740	Spo02740	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo02740.1	Spo02740.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo02740.1.utr5p.1	Spo02740.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo02740.1.CDS.10	Spo02740.1.CDS.10	CDS
Spo02740.1.CDS.9	Spo02740.1.CDS.9	CDS
Spo02740.1.CDS.8	Spo02740.1.CDS.8	CDS
Spo02740.1.CDS.7	Spo02740.1.CDS.7	CDS
Spo02740.1.CDS.6	Spo02740.1.CDS.6	CDS
Spo02740.1.CDS.5	Spo02740.1.CDS.5	CDS
Spo02740.1.CDS.4	Spo02740.1.CDS.4	CDS
Spo02740.1.CDS.3	Spo02740.1.CDS.3	CDS
Spo02740.1.CDS.2	Spo02740.1.CDS.2	CDS
Spo02740.1.CDS.1	Spo02740.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo02740.1.utr3p.1	Spo02740.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo02740.1.exon.10	Spo02740.1.exon.10	exon
Spo02740.1.exon.9	Spo02740.1.exon.9	exon
Spo02740.1.exon.8	Spo02740.1.exon.8	exon
Spo02740.1.exon.7	Spo02740.1.exon.7	exon
Spo02740.1.exon.6	Spo02740.1.exon.6	exon
Spo02740.1.exon.5	Spo02740.1.exon.5	exon
Spo02740.1.exon.4	Spo02740.1.exon.4	exon
Spo02740.1.exon.3	Spo02740.1.exon.3	exon
Spo02740.1.exon.2	Spo02740.1.exon.2	exon
Spo02740.1.exon.1	Spo02740.1.exon.1	exon

Homology

[Close]

BLAST of Spo02740.1 vs. NCBI nr
Match: gi|902180801|gb|KNA09628.1| (hypothetical protein SOVF_151880 [Spinacia oleracea])

HSP 1 Score: 1005.0 bits (2597), Expect = 5.000e-290
Identity = 537/537 (100.00%), Postives = 537/537 (100.00%), Query Frame = 1


		  
Query: 1   MADETSGKTLVSTPSLPDQPQLNDSLVVESVSTEDASTVSAADASTVSAADVSIVSADED 60
           MADETSGKTLVSTPSLPDQPQLNDSLVVESVSTEDASTVSAADASTVSAADVSIVSADED
Sbjct: 1   MADETSGKTLVSTPSLPDQPQLNDSLVVESVSTEDASTVSAADASTVSAADVSIVSADED 60

Query: 61  SGSLSRNSSFSKLNAKAPEFVPKKTHPSPPSSVTGCSGDPRVMIISPSPSPPPGLVHGYP 120
           SGSLSRNSSFSKLNAKAPEFVPKKTHPSPPSSVTGCSGDPRVMIISPSPSPPPGLVHGYP
Sbjct: 61  SGSLSRNSSFSKLNAKAPEFVPKKTHPSPPSSVTGCSGDPRVMIISPSPSPPPGLVHGYP 120

Query: 121 PPPPPQVNLPFPVVPLPPLNHHHHQTQQQQQNHHQHHNQNHHDHPHHNHRNDSHRNHHQK 180
           PPPPPQVNLPFPVVPLPPLNHHHHQTQQQQQNHHQHHNQNHHDHPHHNHRNDSHRNHHQK
Sbjct: 121 PPPPPQVNLPFPVVPLPPLNHHHHQTQQQQQNHHQHHNQNHHDHPHHNHRNDSHRNHHQK 180

Query: 181 HHRGGDQQEGVGQQDKDHGQGNNSGAKNNNGLSDNQKLINQVEYYFSDVNLATTDHLIRF 240
           HHRGGDQQEGVGQQDKDHGQGNNSGAKNNNGLSDNQKLINQVEYYFSDVNLATTDHLIRF
Sbjct: 181 HHRGGDQQEGVGQQDKDHGQGNNSGAKNNNGLSDNQKLINQVEYYFSDVNLATTDHLIRF 240

Query: 241 INKDSEGFVPISVVASFKKIKALINSNSQLAAILRNSTKLVVSEDGKKVKRLHPLTGSDM 300
           INKDSEGFVPISVVASFKKIKALINSNSQLAAILRNSTKLVVSEDGKKVKRLHPLTGSDM
Sbjct: 241 INKDSEGFVPISVVASFKKIKALINSNSQLAAILRNSTKLVVSEDGKKVKRLHPLTGSDM 300

Query: 301 EELQARIIVAENLPDDHCHQKLMKVFSAVGSVKSIRTCQPQPSNNGTSSASRPSKTDNML 360
           EELQARIIVAENLPDDHCHQKLMKVFSAVGSVKSIRTCQPQPSNNGTSSASRPSKTDNML
Sbjct: 301 EELQARIIVAENLPDDHCHQKLMKVFSAVGSVKSIRTCQPQPSNNGTSSASRPSKTDNML 360

Query: 361 YCNKLHAFVEYESVELAEKAIAELNDEGNWRNGLRVRSLLKPGSKAAPARGKKSGNEGEV 420
           YCNKLHAFVEYESVELAEKAIAELNDEGNWRNGLRVRSLLKPGSKAAPARGKKSGNEGEV
Sbjct: 361 YCNKLHAFVEYESVELAEKAIAELNDEGNWRNGLRVRSLLKPGSKAAPARGKKSGNEGEV 420

Query: 421 TCEEEDVSTSEQNQNEKQSENLSKQSDVQAYEQGEEQSLEKDGGQKKSRNRGRGKGRGRG 480
           TCEEEDVSTSEQNQNEKQSENLSKQSDVQAYEQGEEQSLEKDGGQKKSRNRGRGKGRGRG
Sbjct: 421 TCEEEDVSTSEQNQNEKQSENLSKQSDVQAYEQGEEQSLEKDGGQKKSRNRGRGKGRGRG 480

Query: 481 HHQNNRGHHVGSPPVNNFMNGEHPVVAKQQPPGPRMPDGTRGFSMGRGKPIAVNITA 538
           HHQNNRGHHVGSPPVNNFMNGEHPVVAKQQPPGPRMPDGTRGFSMGRGKPIAVNITA
Sbjct: 481 HHQNNRGHHVGSPPVNNFMNGEHPVVAKQQPPGPRMPDGTRGFSMGRGKPIAVNITA 537

[Close]

BLAST of Spo02740.1 vs. NCBI nr
Match: gi|731323601|ref|XP_010672517.1| (PREDICTED: la-related protein 6B [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 702.6 bits (1812), Expect = 5.300e-199
Identity = 401/548 (73.18%), Postives = 442/548 (80.66%), Query Frame = 1


		  
Query: 1   MADETSGKTLVSTPSLPDQPQLNDSLVVESVSTEDASTVSAADASTVSAADVSIVSADED 60
           MAD+TS KTL STP L DQPQ  DS  +++                             +
Sbjct: 1   MADQTSEKTLDSTPPLSDQPQSIDSPTIDT----------------------------SE 60

Query: 61  SGSLSRNSSFSKLNAKAPEFVPKKT-HPSPPSSVTGCSGDPRVMIISPSPSPPPGLVHGY 120
           SGSL+RNSS SKLNAKAPEFVPKK   P+P S+++  + DPRVMI+ P P PPP +VH Y
Sbjct: 61  SGSLTRNSSSSKLNAKAPEFVPKKPISPTPTSAIS--AADPRVMIVPPPPPPPPAMVHVY 120

Query: 121 PPPPPPQVNLPFPVVPLPPLNHHHHQTQQQQQNHHQHHNQNHHDHPHHNHRNDSHRNHHQ 180
           P PP  QVN  FPV+PLP LNHHHH   Q   +HH HHN +HH H + +HRND HRNHH 
Sbjct: 121 PAPPSAQVNAAFPVIPLPHLNHHHHHHNQNHPHHH-HHNDHHHHHRNDHHRNDHHRNHHH 180

Query: 181 KHHR-----GGDQQEGVGQQDKDHGQGNNSGAKNNNGLSD--NQKLINQVEYYFSDVNLA 240
           KHH+      G+QQEGV Q DKD GQGNN+ +++NNGLSD   QKLINQVEYYFSDVNLA
Sbjct: 181 KHHQHQGGSSGEQQEGVSQGDKDQGQGNNAVSRSNNGLSDENTQKLINQVEYYFSDVNLA 240

Query: 241 TTDHLIRFINKDSEGFVPISVVASFKKIKALINSNSQLAAILRNSTKLVVSEDGKKVKRL 300
           TTDHL+RFINKD EGFVPISVVASFKKIKALI+SNSQLAA+LR+S+KLVVSEDGKKVKRL
Sbjct: 241 TTDHLVRFINKDPEGFVPISVVASFKKIKALISSNSQLAAVLRSSSKLVVSEDGKKVKRL 300

Query: 301 HPLTGSDMEELQARIIVAENLPDDHCHQKLMKVFSAVGSVKSIRTCQPQPSNNGTSSASR 360
           HPLTG DMEELQARIIVAENLP+DHCHQ LMKVFS VGSVKSIRTCQPQPSN G SSASR
Sbjct: 301 HPLTGPDMEELQARIIVAENLPEDHCHQNLMKVFSTVGSVKSIRTCQPQPSNTGASSASR 360

Query: 361 PSKTDNMLYCNKLHAFVEYESVELAEKAIAELNDEGNWRNGLRVRSLLKPGSKAAPARGK 420
           PSKTDNMLYCNKLHAFVEYES+ELAEKAIAELNDEGNWRNGLRVR+LLK GSK A  RGK
Sbjct: 361 PSKTDNMLYCNKLHAFVEYESIELAEKAIAELNDEGNWRNGLRVRALLKHGSKTAQTRGK 420

Query: 421 KSGNEGEVTCEEEDVSTSEQNQNEKQSENLSKQSDVQAYEQGEEQSLEKDGGQKKSRNRG 480
           KSGNEGEVTCEEED STSEQNQNEK SE+LS Q DV + E  EEQ+LEK+GGQKK+RNRG
Sbjct: 421 KSGNEGEVTCEEEDASTSEQNQNEKPSEDLSTQPDVHSQEHVEEQTLEKEGGQKKTRNRG 480

Query: 481 RGKGRGRG---HHQNNRGHHVGSPPVNNFMNGEHPVVAKQQPPGPRMPDGTRGFSMGRGK 538
           RGKGRGRG   HHQNNRG HVGSPP+NN MNGEHP+VAKQQPPGPRMPDGTRGFSMGRG+
Sbjct: 481 RGKGRGRGHHNHHQNNRGIHVGSPPINNAMNGEHPIVAKQQPPGPRMPDGTRGFSMGRGR 517

[Close]

BLAST of Spo02740.1 vs. NCBI nr
Match: gi|567899098|ref|XP_006442037.1| (hypothetical protein CICLE_v10019649mg [Citrus clementina])

HSP 1 Score: 481.5 bits (1238), Expect = 1.900e-132
Identity = 307/537 (57.17%), Postives = 379/537 (70.58%), Query Frame = 1


		  
Query: 37  STVSAADASTVSAADVSIVSADEDSGSLSRNSSFSKLNAKAPEFVPKK---THPSPPSSV 96
           S V   D S+ +    S  S+  D  SLSRNSSFS+LNAKAPEFVP +   +  S P   
Sbjct: 5   SQVETLDLSSSNDQSQSSPSSSSDP-SLSRNSSFSRLNAKAPEFVPTRNPQSTQSKPQVQ 64

Query: 97  TGCSGDPRVMIISPSPSPPPGLVHGYPPPP---------PPQVNLPFPVVPLPPLNHHHH 156
                 P+ +++ P P P   +VH +PPPP         PP     F V+P+    HH H
Sbjct: 65  VQVQQPPQRVMMPPPPPPAAAMVHPHPPPPHPPSPHHVYPPHGTGAFHVIPVHHQMHHQH 124

Query: 157 QTQQQQQNH--HQHH-NQNHHDHPHHNHRNDSHRNHHQKHHRGGDQQEGV--GQQDKDHG 216
               Q  +H  HQHH N NHH H H NH N+++ +HHQ +++  DQQEG   G +DK   
Sbjct: 125 HVPVQNYHHQQHQHHRNHNHHHHRHQNHHNNNNNSHHQ-NNQYEDQQEGEVPGVKDKKEK 184

Query: 217 QGNNSGAKNNNGLSDNQKLINQVEYYFSDVNLATTDHLIRFINKDSEGFVPISVVASFKK 276
           + +  G  N+  +   QK++NQVEYYFSD+NLATTDHLIRFI KD EG+VPIS VASFKK
Sbjct: 185 KDHQHGGLNDESI---QKVLNQVEYYFSDLNLATTDHLIRFILKDPEGYVPISTVASFKK 244

Query: 277 IKALINSNSQLAAILRNSTKLVVSEDGKKVKRLHPLTGSDMEELQARIIVAENLPDDHCH 336
           IKA+I+S+S LA++LR S+KLVVSEDGKK+KR +PLT SD+EELQ+RI+VAENLP+DHCH
Sbjct: 245 IKAIISSHSHLASVLRKSSKLVVSEDGKKIKRQNPLTESDLEELQSRIVVAENLPEDHCH 304

Query: 337 QKLMKVFSAVGSVKSIRTCQPQPSNNGTSSASRPSKTDNMLYCNKLHAFVEYESVELAEK 396
           Q LMK+FSAVGSVK+IRTC PQ S  G SS SR +K++ ML+ NKLHAFVEYESVELAEK
Sbjct: 305 QNLMKIFSAVGSVKTIRTCLPQTSGGGASSGSRSAKSEGMLFSNKLHAFVEYESVELAEK 364

Query: 397 AIAELNDEGNWRNGLRVRSLLKPGSKAAPARGKKSGNEGEVTCEEEDVSTSEQNQNEKQS 456
           AIAELNDEGNWR+GLRVR +L+ GSK A  +GKK G+EGE  CEEED STSEQ+ NEKQ 
Sbjct: 365 AIAELNDEGNWRSGLRVRLMLRRGSKPAQVKGKK-GHEGEWQCEEEDTSTSEQHLNEKQP 424

Query: 457 ENLSKQSDVQAYEQ-GEEQSLEKDGGQKKSRNRGRGKGRGR------------------- 516
           ++ S+QSDVQ+++  GEE + EK+GGQ+K RN+GRGKGRGR                   
Sbjct: 425 DDSSQQSDVQSHDHTGEEHNNEKEGGQRKGRNKGRGKGRGRNDRGQYHNNSHHNNSHHNS 484

Query: 517 --GHHQNNRGHHVGSPPVNNFMNGEHPVVAKQQPPGPRMPDGTRGFSMGRGKPIAVN 535
              +H NNRGHHVG+PP NN +N E P++ K QPPGPRMPDGTRGF+MGRGKP+AVN
Sbjct: 485 NHNNHHNNRGHHVGTPPSNNMVNNEQPMIGK-QPPGPRMPDGTRGFAMGRGKPVAVN 534

[Close]

BLAST of Spo02740.1 vs. NCBI nr
Match: gi|641832581|gb|KDO51613.1| (hypothetical protein CISIN_1g009251mg [Citrus sinensis])

HSP 1 Score: 478.4 bits (1230), Expect = 1.600e-131
Identity = 305/540 (56.48%), Postives = 376/540 (69.63%), Query Frame = 1


		  
Query: 37  STVSAADASTVSAADVSIVSADEDSGSLSRNSSFSKLNAKAPEFVPKK---THPSPPSSV 96
           S V   D S+ +    S  S+  D  SLSRNSSFS+LNAKAPEFVP +   +  S P   
Sbjct: 5   SQVETLDLSSSNDQSQSSPSSSSDP-SLSRNSSFSRLNAKAPEFVPTRNPQSTQSKPQVQ 64

Query: 97  TGCSGDPRVMIISPSPSPPPGLVHGYPPPP---------PPQVNLPFPVVPLPPLNHHHH 156
                 P+ +++ P P P   +VH +PPPP         PP     F V+P+    HH H
Sbjct: 65  VQVQQPPQRVMMPPPPPPAAAMVHPHPPPPHPPSPHHVYPPHGTGAFHVIPVHHQMHHQH 124

Query: 157 QT------QQQQQNHHQHHNQNHHDHPHHNHRNDSHRNHHQKHHRGGDQQEGV--GQQDK 216
                    QQ Q H  H N NHH H H NH ++++ +HHQ +++  DQQEG   G +DK
Sbjct: 125 HVPVQNYHHQQHQQHQHHRNHNHHHHRHQNHHHNNNNSHHQ-NNQYEDQQEGEVPGVKDK 184

Query: 217 DHGQGNNSGAKNNNGLSDNQKLINQVEYYFSDVNLATTDHLIRFINKDSEGFVPISVVAS 276
              + +  G  N+  +   QK++NQVEYYFSD+NLATTDHLIRFI KD EG+VPIS VAS
Sbjct: 185 KEKKDHQHGGLNDESI---QKVLNQVEYYFSDLNLATTDHLIRFILKDPEGYVPISTVAS 244

Query: 277 FKKIKALINSNSQLAAILRNSTKLVVSEDGKKVKRLHPLTGSDMEELQARIIVAENLPDD 336
           FKKIKA+I+S+S LA++LR S+KLVVSEDGKK+KR +PLT SD+EELQ+RI+VAENLP+D
Sbjct: 245 FKKIKAIISSHSHLASVLRKSSKLVVSEDGKKIKRQNPLTESDLEELQSRIVVAENLPED 304

Query: 337 HCHQKLMKVFSAVGSVKSIRTCQPQPSNNGTSSASRPSKTDNMLYCNKLHAFVEYESVEL 396
           HCHQ LMK+FSAVGSVK+IRTC PQ S  G SS SR +K++ ML+ NKLHAFVEYESVEL
Sbjct: 305 HCHQNLMKIFSAVGSVKTIRTCLPQTSGGGASSGSRSAKSEGMLFSNKLHAFVEYESVEL 364

Query: 397 AEKAIAELNDEGNWRNGLRVRSLLKPGSKAAPARGKKSGNEGEVTCEEEDVSTSEQNQNE 456
           AEKAIAELNDEGNWR+GLRVR +L+ GSK A  +GKK G EGE  CEEED STSEQ+ NE
Sbjct: 365 AEKAIAELNDEGNWRSGLRVRLMLRRGSKPAQVKGKK-GPEGEWQCEEEDTSTSEQHLNE 424

Query: 457 KQSENLSKQSDVQAYEQ-GEEQSLEKDGGQKKSRNRGRGKGRGR---------------- 516
           KQ ++ S+QSDVQ+++  GEE + EK+GGQ+K RN+GRGKGRGR                
Sbjct: 425 KQPDDSSQQSDVQSHDHTGEEHNNEKEGGQRKGRNKGRGKGRGRNDRGQYHNNSHHNNSH 484

Query: 517 -----GHHQNNRGHHVGSPPVNNFMNGEHPVVAKQQPPGPRMPDGTRGFSMGRGKPIAVN 535
                 +H NNRGHHVG+PP NN +N E P++ K QPPGPRMPDGTRGF+MGRGKP+AVN
Sbjct: 485 HNSNHNNHHNNRGHHVGTPPSNNMVNNEQPMIGK-QPPGPRMPDGTRGFAMGRGKPVAVN 537

[Close]

BLAST of Spo02740.1 vs. NCBI nr
Match: gi|568880450|ref|XP_006493132.1| (PREDICTED: la-related protein 6B [Citrus sinensis])

HSP 1 Score: 478.0 bits (1229), Expect = 2.100e-131
Identity = 305/537 (56.80%), Postives = 375/537 (69.83%), Query Frame = 1


		  
Query: 37  STVSAADASTVSAADVSIVSADEDSGSLSRNSSFSKLNAKAPEFVPKKTHPS---PPSSV 96
           S V   D S+ +    S  S+  D  SLSRNSSFS+LNAKAPEFVP +   S    P   
Sbjct: 5   SQVETLDLSSSNDQSQSPPSSSSDP-SLSRNSSFSRLNAKAPEFVPTRNPQSIQSKPQVQ 64

Query: 97  TGCSGDPRVMIISPSPSPPPGLVHGYPPPPP----------PQVNLPFPVVPLPPLNHHH 156
                 P+ +++ P P P   +VH +PPPPP          P     F V+P+    HH 
Sbjct: 65  VQVQQPPQRVMMPPPPPPAAAMVHPHPPPPPHPPSPHHVYPPHGTGAFHVIPVHHQMHHQ 124

Query: 157 HQTQQQ---QQNHHQHHNQNHHDHPHHNHRNDSHRNHHQKHHRGGDQQEGV--GQQDKDH 216
           H    Q   QQ H  H N NHH H H NH ++++ +HHQ +++  DQQEG   G +DK  
Sbjct: 125 HHVPVQNYHQQQHQHHRNHNHHHHRHQNHHHNNNNSHHQ-NNQYEDQQEGEVPGVKDKKE 184

Query: 217 GQGNNSGAKNNNGLSDNQKLINQVEYYFSDVNLATTDHLIRFINKDSEGFVPISVVASFK 276
            + +  G  N+  +   QK++NQVEYYFSD+NLATTDHLIRFI KD EG+VPIS VASFK
Sbjct: 185 KKDHQHGGLNDESI---QKVLNQVEYYFSDLNLATTDHLIRFILKDPEGYVPISTVASFK 244

Query: 277 KIKALINSNSQLAAILRNSTKLVVSEDGKKVKRLHPLTGSDMEELQARIIVAENLPDDHC 336
           KIKA+I+S+S LA++LR S+KLVVSEDGKK+KR +PLT SD+EELQ+RI+VAENLP+DHC
Sbjct: 245 KIKAIISSHSHLASVLRKSSKLVVSEDGKKIKRQNPLTESDLEELQSRIVVAENLPEDHC 304

Query: 337 HQKLMKVFSAVGSVKSIRTCQPQPSNNGTSSASRPSKTDNMLYCNKLHAFVEYESVELAE 396
           HQ LMK+FSAVGSVK+IRTC PQ S  G SS SR +K++ ML+ NKLHAFVEYESVELAE
Sbjct: 305 HQNLMKIFSAVGSVKTIRTCLPQTSGGGASSGSRSAKSEGMLFSNKLHAFVEYESVELAE 364

Query: 397 KAIAELNDEGNWRNGLRVRSLLKPGSKAAPARGKKSGNEGEVTCEEEDVSTSEQNQNEKQ 456
           KAIAELNDEGNWR+GLRVR +L+ GSK A  +GKK G+EGE  CEEED STSEQ+ NEKQ
Sbjct: 365 KAIAELNDEGNWRSGLRVRLMLRRGSKPAQVKGKK-GHEGEWQCEEEDTSTSEQHLNEKQ 424

Query: 457 SENLSKQSDVQAYEQ-GEEQSLEKDGGQKKSRNRGRGKGRGR------------------ 516
            ++ S+QSDVQ+++  GEE + EK+GGQ+K RN+GRGKGRGR                  
Sbjct: 425 PDDSSQQSDVQSHDHTGEEHNNEKEGGQRKGRNKGRGKGRGRNDRGQYHNSHHNNSHHNS 484

Query: 517 --GHHQNNRGHHVGSPPVNNFMNGEHPVVAKQQPPGPRMPDGTRGFSMGRGKPIAVN 535
               H NNRGHHVG+PP NN +N E P++ K QPPGPRMPDGTRGF+MGRGKP+AVN
Sbjct: 485 NHNSHHNNRGHHVGTPPSNNMVNNEQPMIGK-QPPGPRMPDGTRGFAMGRGKPVAVN 534

[Close]

BLAST of Spo02740.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSH5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_151880 PE=4 SV=1)

HSP 1 Score: 1005.0 bits (2597), Expect = 3.500e-290
Identity = 537/537 (100.00%), Postives = 537/537 (100.00%), Query Frame = 1


		  
Query: 1   MADETSGKTLVSTPSLPDQPQLNDSLVVESVSTEDASTVSAADASTVSAADVSIVSADED 60
           MADETSGKTLVSTPSLPDQPQLNDSLVVESVSTEDASTVSAADASTVSAADVSIVSADED
Sbjct: 1   MADETSGKTLVSTPSLPDQPQLNDSLVVESVSTEDASTVSAADASTVSAADVSIVSADED 60

Query: 61  SGSLSRNSSFSKLNAKAPEFVPKKTHPSPPSSVTGCSGDPRVMIISPSPSPPPGLVHGYP 120
           SGSLSRNSSFSKLNAKAPEFVPKKTHPSPPSSVTGCSGDPRVMIISPSPSPPPGLVHGYP
Sbjct: 61  SGSLSRNSSFSKLNAKAPEFVPKKTHPSPPSSVTGCSGDPRVMIISPSPSPPPGLVHGYP 120

Query: 121 PPPPPQVNLPFPVVPLPPLNHHHHQTQQQQQNHHQHHNQNHHDHPHHNHRNDSHRNHHQK 180
           PPPPPQVNLPFPVVPLPPLNHHHHQTQQQQQNHHQHHNQNHHDHPHHNHRNDSHRNHHQK
Sbjct: 121 PPPPPQVNLPFPVVPLPPLNHHHHQTQQQQQNHHQHHNQNHHDHPHHNHRNDSHRNHHQK 180

Query: 181 HHRGGDQQEGVGQQDKDHGQGNNSGAKNNNGLSDNQKLINQVEYYFSDVNLATTDHLIRF 240
           HHRGGDQQEGVGQQDKDHGQGNNSGAKNNNGLSDNQKLINQVEYYFSDVNLATTDHLIRF
Sbjct: 181 HHRGGDQQEGVGQQDKDHGQGNNSGAKNNNGLSDNQKLINQVEYYFSDVNLATTDHLIRF 240

Query: 241 INKDSEGFVPISVVASFKKIKALINSNSQLAAILRNSTKLVVSEDGKKVKRLHPLTGSDM 300
           INKDSEGFVPISVVASFKKIKALINSNSQLAAILRNSTKLVVSEDGKKVKRLHPLTGSDM
Sbjct: 241 INKDSEGFVPISVVASFKKIKALINSNSQLAAILRNSTKLVVSEDGKKVKRLHPLTGSDM 300

Query: 301 EELQARIIVAENLPDDHCHQKLMKVFSAVGSVKSIRTCQPQPSNNGTSSASRPSKTDNML 360
           EELQARIIVAENLPDDHCHQKLMKVFSAVGSVKSIRTCQPQPSNNGTSSASRPSKTDNML
Sbjct: 301 EELQARIIVAENLPDDHCHQKLMKVFSAVGSVKSIRTCQPQPSNNGTSSASRPSKTDNML 360

Query: 361 YCNKLHAFVEYESVELAEKAIAELNDEGNWRNGLRVRSLLKPGSKAAPARGKKSGNEGEV 420
           YCNKLHAFVEYESVELAEKAIAELNDEGNWRNGLRVRSLLKPGSKAAPARGKKSGNEGEV
Sbjct: 361 YCNKLHAFVEYESVELAEKAIAELNDEGNWRNGLRVRSLLKPGSKAAPARGKKSGNEGEV 420

Query: 421 TCEEEDVSTSEQNQNEKQSENLSKQSDVQAYEQGEEQSLEKDGGQKKSRNRGRGKGRGRG 480
           TCEEEDVSTSEQNQNEKQSENLSKQSDVQAYEQGEEQSLEKDGGQKKSRNRGRGKGRGRG
Sbjct: 421 TCEEEDVSTSEQNQNEKQSENLSKQSDVQAYEQGEEQSLEKDGGQKKSRNRGRGKGRGRG 480

Query: 481 HHQNNRGHHVGSPPVNNFMNGEHPVVAKQQPPGPRMPDGTRGFSMGRGKPIAVNITA 538
           HHQNNRGHHVGSPPVNNFMNGEHPVVAKQQPPGPRMPDGTRGFSMGRGKPIAVNITA
Sbjct: 481 HHQNNRGHHVGSPPVNNFMNGEHPVVAKQQPPGPRMPDGTRGFSMGRGKPIAVNITA 537

[Close]

BLAST of Spo02740.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FI93_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g059310 PE=4 SV=1)

HSP 1 Score: 702.6 bits (1812), Expect = 3.700e-199
Identity = 401/548 (73.18%), Postives = 442/548 (80.66%), Query Frame = 1


		  
Query: 1   MADETSGKTLVSTPSLPDQPQLNDSLVVESVSTEDASTVSAADASTVSAADVSIVSADED 60
           MAD+TS KTL STP L DQPQ  DS  +++                             +
Sbjct: 1   MADQTSEKTLDSTPPLSDQPQSIDSPTIDT----------------------------SE 60

Query: 61  SGSLSRNSSFSKLNAKAPEFVPKKT-HPSPPSSVTGCSGDPRVMIISPSPSPPPGLVHGY 120
           SGSL+RNSS SKLNAKAPEFVPKK   P+P S+++  + DPRVMI+ P P PPP +VH Y
Sbjct: 61  SGSLTRNSSSSKLNAKAPEFVPKKPISPTPTSAIS--AADPRVMIVPPPPPPPPAMVHVY 120

Query: 121 PPPPPPQVNLPFPVVPLPPLNHHHHQTQQQQQNHHQHHNQNHHDHPHHNHRNDSHRNHHQ 180
           P PP  QVN  FPV+PLP LNHHHH   Q   +HH HHN +HH H + +HRND HRNHH 
Sbjct: 121 PAPPSAQVNAAFPVIPLPHLNHHHHHHNQNHPHHH-HHNDHHHHHRNDHHRNDHHRNHHH 180

Query: 181 KHHR-----GGDQQEGVGQQDKDHGQGNNSGAKNNNGLSD--NQKLINQVEYYFSDVNLA 240
           KHH+      G+QQEGV Q DKD GQGNN+ +++NNGLSD   QKLINQVEYYFSDVNLA
Sbjct: 181 KHHQHQGGSSGEQQEGVSQGDKDQGQGNNAVSRSNNGLSDENTQKLINQVEYYFSDVNLA 240

Query: 241 TTDHLIRFINKDSEGFVPISVVASFKKIKALINSNSQLAAILRNSTKLVVSEDGKKVKRL 300
           TTDHL+RFINKD EGFVPISVVASFKKIKALI+SNSQLAA+LR+S+KLVVSEDGKKVKRL
Sbjct: 241 TTDHLVRFINKDPEGFVPISVVASFKKIKALISSNSQLAAVLRSSSKLVVSEDGKKVKRL 300

Query: 301 HPLTGSDMEELQARIIVAENLPDDHCHQKLMKVFSAVGSVKSIRTCQPQPSNNGTSSASR 360
           HPLTG DMEELQARIIVAENLP+DHCHQ LMKVFS VGSVKSIRTCQPQPSN G SSASR
Sbjct: 301 HPLTGPDMEELQARIIVAENLPEDHCHQNLMKVFSTVGSVKSIRTCQPQPSNTGASSASR 360

Query: 361 PSKTDNMLYCNKLHAFVEYESVELAEKAIAELNDEGNWRNGLRVRSLLKPGSKAAPARGK 420
           PSKTDNMLYCNKLHAFVEYES+ELAEKAIAELNDEGNWRNGLRVR+LLK GSK A  RGK
Sbjct: 361 PSKTDNMLYCNKLHAFVEYESIELAEKAIAELNDEGNWRNGLRVRALLKHGSKTAQTRGK 420

Query: 421 KSGNEGEVTCEEEDVSTSEQNQNEKQSENLSKQSDVQAYEQGEEQSLEKDGGQKKSRNRG 480
           KSGNEGEVTCEEED STSEQNQNEK SE+LS Q DV + E  EEQ+LEK+GGQKK+RNRG
Sbjct: 421 KSGNEGEVTCEEEDASTSEQNQNEKPSEDLSTQPDVHSQEHVEEQTLEKEGGQKKTRNRG 480

Query: 481 RGKGRGRG---HHQNNRGHHVGSPPVNNFMNGEHPVVAKQQPPGPRMPDGTRGFSMGRGK 538
           RGKGRGRG   HHQNNRG HVGSPP+NN MNGEHP+VAKQQPPGPRMPDGTRGFSMGRG+
Sbjct: 481 RGKGRGRGHHNHHQNNRGIHVGSPPINNAMNGEHPIVAKQQPPGPRMPDGTRGFSMGRGR 517

[Close]

BLAST of Spo02740.1 vs. UniProtKB/TrEMBL
Match: V4TPF1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019649mg PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 1.300e-132
Identity = 307/537 (57.17%), Postives = 379/537 (70.58%), Query Frame = 1


		  
Query: 37  STVSAADASTVSAADVSIVSADEDSGSLSRNSSFSKLNAKAPEFVPKK---THPSPPSSV 96
           S V   D S+ +    S  S+  D  SLSRNSSFS+LNAKAPEFVP +   +  S P   
Sbjct: 5   SQVETLDLSSSNDQSQSSPSSSSDP-SLSRNSSFSRLNAKAPEFVPTRNPQSTQSKPQVQ 64

Query: 97  TGCSGDPRVMIISPSPSPPPGLVHGYPPPP---------PPQVNLPFPVVPLPPLNHHHH 156
                 P+ +++ P P P   +VH +PPPP         PP     F V+P+    HH H
Sbjct: 65  VQVQQPPQRVMMPPPPPPAAAMVHPHPPPPHPPSPHHVYPPHGTGAFHVIPVHHQMHHQH 124

Query: 157 QTQQQQQNH--HQHH-NQNHHDHPHHNHRNDSHRNHHQKHHRGGDQQEGV--GQQDKDHG 216
               Q  +H  HQHH N NHH H H NH N+++ +HHQ +++  DQQEG   G +DK   
Sbjct: 125 HVPVQNYHHQQHQHHRNHNHHHHRHQNHHNNNNNSHHQ-NNQYEDQQEGEVPGVKDKKEK 184

Query: 217 QGNNSGAKNNNGLSDNQKLINQVEYYFSDVNLATTDHLIRFINKDSEGFVPISVVASFKK 276
           + +  G  N+  +   QK++NQVEYYFSD+NLATTDHLIRFI KD EG+VPIS VASFKK
Sbjct: 185 KDHQHGGLNDESI---QKVLNQVEYYFSDLNLATTDHLIRFILKDPEGYVPISTVASFKK 244

Query: 277 IKALINSNSQLAAILRNSTKLVVSEDGKKVKRLHPLTGSDMEELQARIIVAENLPDDHCH 336
           IKA+I+S+S LA++LR S+KLVVSEDGKK+KR +PLT SD+EELQ+RI+VAENLP+DHCH
Sbjct: 245 IKAIISSHSHLASVLRKSSKLVVSEDGKKIKRQNPLTESDLEELQSRIVVAENLPEDHCH 304

Query: 337 QKLMKVFSAVGSVKSIRTCQPQPSNNGTSSASRPSKTDNMLYCNKLHAFVEYESVELAEK 396
           Q LMK+FSAVGSVK+IRTC PQ S  G SS SR +K++ ML+ NKLHAFVEYESVELAEK
Sbjct: 305 QNLMKIFSAVGSVKTIRTCLPQTSGGGASSGSRSAKSEGMLFSNKLHAFVEYESVELAEK 364

Query: 397 AIAELNDEGNWRNGLRVRSLLKPGSKAAPARGKKSGNEGEVTCEEEDVSTSEQNQNEKQS 456
           AIAELNDEGNWR+GLRVR +L+ GSK A  +GKK G+EGE  CEEED STSEQ+ NEKQ 
Sbjct: 365 AIAELNDEGNWRSGLRVRLMLRRGSKPAQVKGKK-GHEGEWQCEEEDTSTSEQHLNEKQP 424

Query: 457 ENLSKQSDVQAYEQ-GEEQSLEKDGGQKKSRNRGRGKGRGR------------------- 516
           ++ S+QSDVQ+++  GEE + EK+GGQ+K RN+GRGKGRGR                   
Sbjct: 425 DDSSQQSDVQSHDHTGEEHNNEKEGGQRKGRNKGRGKGRGRNDRGQYHNNSHHNNSHHNS 484

Query: 517 --GHHQNNRGHHVGSPPVNNFMNGEHPVVAKQQPPGPRMPDGTRGFSMGRGKPIAVN 535
              +H NNRGHHVG+PP NN +N E P++ K QPPGPRMPDGTRGF+MGRGKP+AVN
Sbjct: 485 NHNNHHNNRGHHVGTPPSNNMVNNEQPMIGK-QPPGPRMPDGTRGFAMGRGKPVAVN 534

[Close]

BLAST of Spo02740.1 vs. UniProtKB/TrEMBL
Match: A0A067E956_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009251mg PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 1.100e-131
Identity = 305/540 (56.48%), Postives = 376/540 (69.63%), Query Frame = 1


		  
Query: 37  STVSAADASTVSAADVSIVSADEDSGSLSRNSSFSKLNAKAPEFVPKK---THPSPPSSV 96
           S V   D S+ +    S  S+  D  SLSRNSSFS+LNAKAPEFVP +   +  S P   
Sbjct: 5   SQVETLDLSSSNDQSQSSPSSSSDP-SLSRNSSFSRLNAKAPEFVPTRNPQSTQSKPQVQ 64

Query: 97  TGCSGDPRVMIISPSPSPPPGLVHGYPPPP---------PPQVNLPFPVVPLPPLNHHHH 156
                 P+ +++ P P P   +VH +PPPP         PP     F V+P+    HH H
Sbjct: 65  VQVQQPPQRVMMPPPPPPAAAMVHPHPPPPHPPSPHHVYPPHGTGAFHVIPVHHQMHHQH 124

Query: 157 QT------QQQQQNHHQHHNQNHHDHPHHNHRNDSHRNHHQKHHRGGDQQEGV--GQQDK 216
                    QQ Q H  H N NHH H H NH ++++ +HHQ +++  DQQEG   G +DK
Sbjct: 125 HVPVQNYHHQQHQQHQHHRNHNHHHHRHQNHHHNNNNSHHQ-NNQYEDQQEGEVPGVKDK 184

Query: 217 DHGQGNNSGAKNNNGLSDNQKLINQVEYYFSDVNLATTDHLIRFINKDSEGFVPISVVAS 276
              + +  G  N+  +   QK++NQVEYYFSD+NLATTDHLIRFI KD EG+VPIS VAS
Sbjct: 185 KEKKDHQHGGLNDESI---QKVLNQVEYYFSDLNLATTDHLIRFILKDPEGYVPISTVAS 244

Query: 277 FKKIKALINSNSQLAAILRNSTKLVVSEDGKKVKRLHPLTGSDMEELQARIIVAENLPDD 336
           FKKIKA+I+S+S LA++LR S+KLVVSEDGKK+KR +PLT SD+EELQ+RI+VAENLP+D
Sbjct: 245 FKKIKAIISSHSHLASVLRKSSKLVVSEDGKKIKRQNPLTESDLEELQSRIVVAENLPED 304

Query: 337 HCHQKLMKVFSAVGSVKSIRTCQPQPSNNGTSSASRPSKTDNMLYCNKLHAFVEYESVEL 396
           HCHQ LMK+FSAVGSVK+IRTC PQ S  G SS SR +K++ ML+ NKLHAFVEYESVEL
Sbjct: 305 HCHQNLMKIFSAVGSVKTIRTCLPQTSGGGASSGSRSAKSEGMLFSNKLHAFVEYESVEL 364

Query: 397 AEKAIAELNDEGNWRNGLRVRSLLKPGSKAAPARGKKSGNEGEVTCEEEDVSTSEQNQNE 456
           AEKAIAELNDEGNWR+GLRVR +L+ GSK A  +GKK G EGE  CEEED STSEQ+ NE
Sbjct: 365 AEKAIAELNDEGNWRSGLRVRLMLRRGSKPAQVKGKK-GPEGEWQCEEEDTSTSEQHLNE 424

Query: 457 KQSENLSKQSDVQAYEQ-GEEQSLEKDGGQKKSRNRGRGKGRGR---------------- 516
           KQ ++ S+QSDVQ+++  GEE + EK+GGQ+K RN+GRGKGRGR                
Sbjct: 425 KQPDDSSQQSDVQSHDHTGEEHNNEKEGGQRKGRNKGRGKGRGRNDRGQYHNNSHHNNSH 484

Query: 517 -----GHHQNNRGHHVGSPPVNNFMNGEHPVVAKQQPPGPRMPDGTRGFSMGRGKPIAVN 535
                 +H NNRGHHVG+PP NN +N E P++ K QPPGPRMPDGTRGF+MGRGKP+AVN
Sbjct: 485 HNSNHNNHHNNRGHHVGTPPSNNMVNNEQPMIGK-QPPGPRMPDGTRGFAMGRGKPVAVN 537

[Close]

BLAST of Spo02740.1 vs. UniProtKB/TrEMBL
Match: A0A067E8U6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009251mg PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 2.800e-130
Identity = 303/540 (56.11%), Postives = 375/540 (69.44%), Query Frame = 1


		  
Query: 37  STVSAADASTVSAADVSIVSADEDSGSLSRNSSFSKLNAKAPEFVPKK---THPSPPSSV 96
           S V   D S+ +    S  S+  D  SLSRNSSFS+LNAKAPEFVP +   +  S P   
Sbjct: 5   SQVETLDLSSSNDQSQSSPSSSSDP-SLSRNSSFSRLNAKAPEFVPTRNPQSTQSKPQVQ 64

Query: 97  TGCSGDPRVMIISPSPSPPPGLVHGYPPPP---------PPQVNLPFPVVPLPPLNHHHH 156
                 P+ +++ P P P   +VH +PPPP         PP     F V+P+    HH H
Sbjct: 65  VQVQQPPQRVMMPPPPPPAAAMVHPHPPPPHPPSPHHVYPPHGTGAFHVIPVHHQMHHQH 124

Query: 157 QT------QQQQQNHHQHHNQNHHDHPHHNHRNDSHRNHHQKHHRGGDQQEGV--GQQDK 216
                    QQ Q H  H N NHH H H NH ++++ +HHQ +++  DQQEG   G +DK
Sbjct: 125 HVPVQNYHHQQHQQHQHHRNHNHHHHRHQNHHHNNNNSHHQ-NNQYEDQQEGEVPGVKDK 184

Query: 217 DHGQGNNSGAKNNNGLSDNQKLINQVEYYFSDVNLATTDHLIRFINKDSEGFVPISVVAS 276
              + +  G  N+  +   QK++NQVEYYFSD+NLATTDHLIRFI KD EG+VPIS VAS
Sbjct: 185 KEKKDHQHGGLNDESI---QKVLNQVEYYFSDLNLATTDHLIRFILKDPEGYVPISTVAS 244

Query: 277 FKKIKALINSNSQLAAILRNSTKLVVSEDGKKVKRLHPLTGSDMEELQARIIVAENLPDD 336
           FKKIKA+I+S+S LA++LR S+KLVVSEDGKK+KR +PLT SD+EELQ+RI+VAENLP+D
Sbjct: 245 FKKIKAIISSHSHLASVLRKSSKLVVSEDGKKIKRQNPLTESDLEELQSRIVVAENLPED 304

Query: 337 HCHQKLMKVFSAVGSVKSIRTCQPQPSNNGTSSASRPSKTDNMLYCNKLHAFVEYESVEL 396
           HCHQ LMK+FSAVGSVK+IRTC PQ S  G SS SR +K++ ML+ NKLHAFVEYESVEL
Sbjct: 305 HCHQNLMKIFSAVGSVKTIRTCLPQTSGGGASSGSRSAKSEGMLFSNKLHAFVEYESVEL 364

Query: 397 AEKAIAELNDEGNWRNGLRVRSLLKPGSKAAPARGKKSGNEGEVTCEEEDVSTSEQNQNE 456
           AEKAIAELNDEGNWR+GLRVR +L+ GSK A  +GKK G EGE  CEEED STSEQ+ NE
Sbjct: 365 AEKAIAELNDEGNWRSGLRVRLMLRRGSKPAQVKGKK-GPEGEWQCEEEDTSTSEQHLNE 424

Query: 457 KQSENLSKQSDVQAYEQG-EEQSLEKDGGQKKSRNRGRGKGRGR---------------- 516
           KQ ++ S+QSDVQ+++   +E + EK+GGQ+K RN+GRGKGRGR                
Sbjct: 425 KQPDDSSQQSDVQSHDHTVKEHNNEKEGGQRKGRNKGRGKGRGRNDRGQYHNNSHHNNSH 484

Query: 517 -----GHHQNNRGHHVGSPPVNNFMNGEHPVVAKQQPPGPRMPDGTRGFSMGRGKPIAVN 535
                 +H NNRGHHVG+PP NN +N E P++ K QPPGPRMPDGTRGF+MGRGKP+AVN
Sbjct: 485 HNSNHNNHHNNRGHHVGTPPSNNMVNNEQPMIGK-QPPGPRMPDGTRGFAMGRGKPVAVN 537

[Close]

BLAST of Spo02740.1 vs. ExPASy Swiss-Prot
Match: LRP6B_ARATH (La-related protein 6B OS=Arabidopsis thaliana GN=LARP6B PE=1 SV=2)

HSP 1 Score: 366.3 bits (939), Expect = 5.700e-100
Identity = 278/571 (48.69%), Postives = 358/571 (62.70%), Query Frame = 1


		  
Query: 16  LPDQPQLNDSLVVESVSTEDASTVSAADASTVSAADVSIVSADEDSGSLSRNSSFSKLNA 75
           + DQ  L DS       ++D S  S + +ST SA+  S         SL R+ S S+LNA
Sbjct: 1   MADQQTL-DSSTPPPTQSDDLSH-SHSTSSTTSASSSS-------DPSLLRSLSLSRLNA 60

Query: 76  KAPEFVPKKTHPSPPSSVTGCSGDPRVMIISPSPSPPPGLVHGYPPPPPPQVNL--PFPV 135
            APEFVP +T P  P         PR++I    P PP G++H Y   PP    +  P P+
Sbjct: 61  GAPEFVPGRTTPPLPQP-------PRMII---PPPPPHGMLHMYHHQPPFNTPVLGPVPI 120

Query: 136 VP-LPPLNHHHHQTQQQQQNHHQHHNQNHHDHPHHNHRNDSHRNHHQKHHRGG---DQQE 195
            P L P+ +HH         HH+ H Q+HH + H N +    RNH +   RGG   +Q+ 
Sbjct: 121 QPHLVPVQNHHP--------HHRFH-QHHHHNRHQNQQYVPVRNHGEYQQRGGVGGEQEP 180

Query: 196 GVGQQDKDHGQGNNSGAKNNN--------------GLSDN--QKLINQVEYYFSDVNLAT 255
            +  +  D    +   +KN+               GL ++  QK++NQVEYYFSD+NLAT
Sbjct: 181 DLVSKKNDRRDHSKRESKNDQVTETGASVSIDSKTGLPEDSIQKIVNQVEYYFSDLNLAT 240

Query: 256 TDHLIRFINKDSEGFVPISVVASFKKIKALINSNSQLAAILRNSTKLVVSEDGKKVKRLH 315
           TDHL+RFI KD EG+VPI VVASFKKIKA+IN+NSQLAA+L+NS KL VSEDGKKV+R+ 
Sbjct: 241 TDHLMRFICKDPEGYVPIHVVASFKKIKAVINNNSQLAAVLQNSAKLFVSEDGKKVRRIS 300

Query: 316 PLTGSDMEELQARIIVAENLPDDHCHQKLMKVFSAVGSVKSIRTCQPQPSNNGTSSASR- 375
           P+T S +EELQ+RIIVAENLP+DHC+Q LMK+FS VGSVK+IRTCQPQ + +G   A+R 
Sbjct: 301 PITESAIEELQSRIIVAENLPEDHCYQNLMKIFSTVGSVKNIRTCQPQNNGSGAPPAARS 360

Query: 376 PSKTDNMLYCNKLHAFVEYESVELAEKAIAELNDEGNWRNGLRVRSLLKPGS---KAAPA 435
            +K+D  L+ NK+HAFVEYE VELAE+A+ EL++ GNWR+GL+VR +LK  +   K    
Sbjct: 361 AAKSDGTLFSNKVHAFVEYEIVELAERAVTELSEAGNWRSGLKVRLMLKHQTKEPKQGQG 420

Query: 436 RGKKSGNEGEVTCEEEDVSTSEQNQNEKQSENLSKQSDVQAYEQ--GEEQSLEKDGGQKK 495
           RG+K G++ +V  EE+D +TSEQ   EKQS++ S + D    EQ  GE+Q  EK  GQ+K
Sbjct: 421 RGRK-GHDADVEHEEDDATTSEQQPIEKQSDDCSGEWDTHMQEQPIGEDQGNEKAAGQRK 480

Query: 496 SRNRGRGKGRGRG-----------------HHQNNRGHH-------VGSPPVNNFMNG-E 534
            RNRGRGKGRGRG                 H+ N RG+H       VG+ P NN MN  E
Sbjct: 481 GRNRGRGKGRGRGQPHQNQNQNNNHSHNQNHNHNGRGNHHHHHHHQVGTQPSNNPMNNME 540

[Close]

BLAST of Spo02740.1 vs. ExPASy Swiss-Prot
Match: LRP6C_ARATH (La-related protein 6C OS=Arabidopsis thaliana GN=LARP6C PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.700e-51
Identity = 143/348 (41.09%), Postives = 196/348 (56.32%), Query Frame = 1


		  
Query: 203 NSGAKNNNGLSDNQ--KLINQVEYYFSDVNLATTDHLIRFINKDSEGFVPISVVASFKKI 262
           NS + + N LSD+   K++ QVEY F+D++L   + + + I+KD EG+VP+S +AS KKI
Sbjct: 131 NSSSSSKNLLSDDLRLKIVKQVEYQFTDMSLLANESISKHISKDPEGYVPVSYIASTKKI 190

Query: 263 KALINSNSQLAAILRNSTKLVVSEDGKKVKRLHPLTGSDMEELQARIIVAENLPDDHCHQ 322
           KAL +++  ++  LR+S+KLVVSEDGKKVKR    T  D EELQ R +VAENLPDDH +Q
Sbjct: 191 KALTSNHHLVSLALRSSSKLVVSEDGKKVKRTSQFTDRDREELQGRTVVAENLPDDHSYQ 250

Query: 323 KLMKVFSAVGSVKSIRTCQPQPSNNGTSSASRPSKTDNMLYCNKLHAFVEYESVELAEKA 382
            L K+F  VG+VK+IR C P  SN     +SRP    + L  NK+HA +EY++  +A+KA
Sbjct: 251 NLEKIFGVVGNVKAIRICHPPESN-----SSRPK--GDFLMSNKIHALIEYDNTVIADKA 310

Query: 383 IAELNDEGNWRNGLRVRSLLKPGSKAAPARGKKSGNEGEVTCEEEDVSTSEQNQNEKQSE 442
           + +LNDE NWR GLRVR LL+                    C  + V      +N +  +
Sbjct: 311 VEKLNDERNWRKGLRVRLLLR--------------------CSPKSVL-----KNRRNFD 370

Query: 443 NLSKQSDVQAYEQGE--------EQSLEKDGGQKKSR---NRGRGKGRGRGHHQNNRGHH 502
            +    ++ +YE GE        E  L+ DG          +GRGKGRGR       G  
Sbjct: 371 GILIDDELPSYESGEDSPRLHLTESQLDNDGDDNNVGGLWGKGRGKGRGRSPRSYAVGGG 430

Query: 503 VGSPPVNNFMNGEHPVVA-------KQQPPGPRMPDGTRGFSMGRGKP 531
             S  +   ++   P +        K    GPRMPDGTRGF+MGRGKP
Sbjct: 431 GRSFGIGLGVSLGIPSLGSHESSSPKTATKGPRMPDGTRGFTMGRGKP 446

[Close]

BLAST of Spo02740.1 vs. ExPASy Swiss-Prot
Match: LRP6A_ARATH (La-related protein 6A OS=Arabidopsis thaliana GN=LARP6A PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 8.600e-48
Identity = 140/353 (39.66%), Postives = 207/353 (58.64%), Query Frame = 1


		  
Query: 186 DQQEGVGQ-QDKDHGQGNNSGAKNNNGLSD-NQKLINQVEYYFSDVNLATTDHLIRFINK 245
           D +   G+ +D+DHG+           + + NQK+I QVEYYFSD NL T   L+  + +
Sbjct: 73  DHERNSGEDRDQDHGENPVETDGVVVPIDELNQKIIRQVEYYFSDENLPTDKFLLNAMKR 132

Query: 246 DSEGFVPISVVASFKKIKALINSNSQLAAILRNSTKLVVSEDGKKVKRLHPLTGSDMEEL 305
           + +GFVPIS +A+F K+K L   ++ + + L+ S+ LVVS D KKVKRL PL   ++ + 
Sbjct: 133 NKKGFVPISTIATFHKMKKLTRDHALIVSALKESSFLVVSADEKKVKRLSPL--PEIRDP 192

Query: 306 QARIIVAENLPDDHCHQKLMKVFSAVGSVKSIRTCQPQPSNNGTSSASRPSKTDNMLYCN 365
           +   ++ ENLP+DH ++ + ++F   GS+KS+  C P    N    + +  K +N +   
Sbjct: 193 KIFTVLVENLPEDHSNENIREIFGKAGSIKSVSICDP----NAVEESEKGGKKENFIR-T 252

Query: 366 KLHAFVEYESVELAEKAIAELNDEGNWRNGLRVRSLLKPGSKAA---PARGKKSGNEGEV 425
           +LHAFVEYE+VE AEKA A LN+E +WRNGLRV+ L +   K A   PAR ++   E + 
Sbjct: 253 RLHAFVEYETVEAAEKAAATLNNEQDWRNGLRVKLLEQAAGKFAQRRPAR-REVDKEKDT 312

Query: 426 TCEEEDVSTSEQNQNEKQSEN-LSKQSDVQAYEQGEEQSLEKDGGQKKSRNRGRGKGRG- 485
           T    D +  E+N+  ++ +N     SD  A + G     +K+G      N+GR  G+G 
Sbjct: 313 TGRVHDQTGGEKNKKTREHQNHRLHHSDNPADDDGGNHQKDKNG------NKGRVVGQGR 372

Query: 486 RGHHQNNRGHHVGSPPVNNFMNGEHPVVAKQQPPGPRMPDGTRGFSMGRGKPI 532
           R +HQ   G   G+   ++  N  HPV   ++PPGPRMPDGTRGF+MGRGK I
Sbjct: 373 RQNHQGGNGIGHGTASSSSHPN-YHPVEVSKRPPGPRMPDGTRGFTMGRGKAI 410

[Close]

BLAST of Spo02740.1 vs. ExPASy Swiss-Prot
Match: LARP7_XENTR (La-related protein 7 OS=Xenopus tropicalis GN=larp7 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 7.100e-10
Identity = 66/246 (26.83%), Postives = 117/246 (47.56%), Query Frame = 1


		  
Query: 218 LINQVEYYFSDVNLATTDHLIRFINKDSEGFVPISVVASFKKIKALINSNSQLAAILRNS 277
           +  QV+++F DVNL     L   I K  +G++ IS++ASF K+K +   +  +A  ++NS
Sbjct: 40  IAKQVDFWFGDVNLHKDRFLREQIEKTRDGYIDISLLASFNKMKKITTDSKLIARAVKNS 99

Query: 278 TKLVVSEDGKKVKRLHPLTGSDMEELQARIIVAENLPDDHCHQKLMKVFSAVGSVKSIRT 337
           + + ++  G K++R  PL G   +++ +R +  E LP +  H  + +VF   G V  +  
Sbjct: 100 SVVEINLSGTKIRRRFPL-GEKPQDVDSRTVYVELLPKNVTHSWIERVFGKYGMV--VYV 159

Query: 338 CQPQPSNNGTSSASRPSKTDNMLYCNKLHAFVEYESVELAEKAIAELN---DEGNWRNGL 397
             P+  + G                 K  AF+E+E+ E A KAI  LN   +E   + G+
Sbjct: 160 SIPRYKSTGDP---------------KGFAFIEFETQEQAAKAIEVLNNPPEEAPRKAGM 219

Query: 398 RVRSLLKPGSKAAPARGKKSGNEGEVTCEEEDVSTSEQNQNEKQSENLSKQSDVQAYEQG 457
             +++    +K  P        E  +T   E   T E+ + +K+     K S  +A E  
Sbjct: 220 FPKTV---KNKHLP---PVEVTEHSIT---EGCGTEEKKKKKKKKSKARKDSVEKAEEDT 258

Query: 458 EEQSLE 461
           +EQ ++
Sbjct: 280 KEQDMD 258

[Close]

BLAST of Spo02740.1 vs. ExPASy Swiss-Prot
Match: LARP7_HUMAN (La-related protein 7 OS=Homo sapiens GN=LARP7 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.100e-9
Identity = 71/257 (27.63%), Postives = 121/257 (47.08%), Query Frame = 1


		  
Query: 218 LINQVEYYFSDVNLATTDHLIRFINKDSEGFVPISVVASFKKIKALINSNSQLAAILRNS 277
           +  QV+++F D NL     L   I K  +G+V IS++ SF K+K L      +A  LR+S
Sbjct: 38  IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSS 97

Query: 278 TKLVVSEDGKKVKRLHPLTGSDMEELQARIIVAENLPDDHCHQKLMKVFSAVGSVKSIRT 337
             + +  +G +++R  PL G   ++   R +  E LP +  H  + +VF   G+V  I  
Sbjct: 98  AVVELDLEGTRIRRKKPL-GERPKDEDERTVYVELLPKNVNHSWIERVFGKCGNVVYISI 157

Query: 338 CQPQPSNNGTSSASRPSKTDNMLYCNKLHAFVEYESVELAEKAIAELN---DEGNWRNGL 397
             P   + G                 K  AFVE+E+ E A KAI  LN   +E   + G+
Sbjct: 158 --PHYKSTGDP---------------KGFAFVEFETKEQAAKAIEFLNNPPEEAPRKPGI 217

Query: 398 ---RVRSLLKPGSKAAPARGKKSGNEG------EVTCEEEDVSTSEQNQNE-KQSENLSK 457
               V++   P  +    + KK   +G       +  +EE++ TS  + ++ K+S   S+
Sbjct: 218 FPKTVKNKPIPALRVVEEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSE 276

Query: 458 QSDVQAYEQGEEQSLEK 462
            SD+++ E  ++ S +K
Sbjct: 278 GSDIESTEPQKQCSKKK 276

[Close]

BLAST of Spo02740.1 vs. TAIR (Arabidopsis)
Match: AT2G43970.1 (RNA-binding protein)

HSP 1 Score: 366.3 bits (939), Expect = 3.200e-101
Identity = 278/571 (48.69%), Postives = 358/571 (62.70%), Query Frame = 1


		  
Query: 16  LPDQPQLNDSLVVESVSTEDASTVSAADASTVSAADVSIVSADEDSGSLSRNSSFSKLNA 75
           + DQ  L DS       ++D S  S + +ST SA+  S         SL R+ S S+LNA
Sbjct: 1   MADQQTL-DSSTPPPTQSDDLSH-SHSTSSTTSASSSS-------DPSLLRSLSLSRLNA 60

Query: 76  KAPEFVPKKTHPSPPSSVTGCSGDPRVMIISPSPSPPPGLVHGYPPPPPPQVNL--PFPV 135
            APEFVP +T P  P         PR++I    P PP G++H Y   PP    +  P P+
Sbjct: 61  GAPEFVPGRTTPPLPQP-------PRMII---PPPPPHGMLHMYHHQPPFNTPVLGPVPI 120

Query: 136 VP-LPPLNHHHHQTQQQQQNHHQHHNQNHHDHPHHNHRNDSHRNHHQKHHRGG---DQQE 195
            P L P+ +HH         HH+ H Q+HH + H N +    RNH +   RGG   +Q+ 
Sbjct: 121 QPHLVPVQNHHP--------HHRFH-QHHHHNRHQNQQYVPVRNHGEYQQRGGVGGEQEP 180

Query: 196 GVGQQDKDHGQGNNSGAKNNN--------------GLSDN--QKLINQVEYYFSDVNLAT 255
            +  +  D    +   +KN+               GL ++  QK++NQVEYYFSD+NLAT
Sbjct: 181 DLVSKKNDRRDHSKRESKNDQVTETGASVSIDSKTGLPEDSIQKIVNQVEYYFSDLNLAT 240

Query: 256 TDHLIRFINKDSEGFVPISVVASFKKIKALINSNSQLAAILRNSTKLVVSEDGKKVKRLH 315
           TDHL+RFI KD EG+VPI VVASFKKIKA+IN+NSQLAA+L+NS KL VSEDGKKV+R+ 
Sbjct: 241 TDHLMRFICKDPEGYVPIHVVASFKKIKAVINNNSQLAAVLQNSAKLFVSEDGKKVRRIS 300

Query: 316 PLTGSDMEELQARIIVAENLPDDHCHQKLMKVFSAVGSVKSIRTCQPQPSNNGTSSASR- 375
           P+T S +EELQ+RIIVAENLP+DHC+Q LMK+FS VGSVK+IRTCQPQ + +G   A+R 
Sbjct: 301 PITESAIEELQSRIIVAENLPEDHCYQNLMKIFSTVGSVKNIRTCQPQNNGSGAPPAARS 360

Query: 376 PSKTDNMLYCNKLHAFVEYESVELAEKAIAELNDEGNWRNGLRVRSLLKPGS---KAAPA 435
            +K+D  L+ NK+HAFVEYE VELAE+A+ EL++ GNWR+GL+VR +LK  +   K    
Sbjct: 361 AAKSDGTLFSNKVHAFVEYEIVELAERAVTELSEAGNWRSGLKVRLMLKHQTKEPKQGQG 420

Query: 436 RGKKSGNEGEVTCEEEDVSTSEQNQNEKQSENLSKQSDVQAYEQ--GEEQSLEKDGGQKK 495
           RG+K G++ +V  EE+D +TSEQ   EKQS++ S + D    EQ  GE+Q  EK  GQ+K
Sbjct: 421 RGRK-GHDADVEHEEDDATTSEQQPIEKQSDDCSGEWDTHMQEQPIGEDQGNEKAAGQRK 480

Query: 496 SRNRGRGKGRGRG-----------------HHQNNRGHH-------VGSPPVNNFMNG-E 534
            RNRGRGKGRGRG                 H+ N RG+H       VG+ P NN MN  E
Sbjct: 481 GRNRGRGKGRGRGQPHQNQNQNNNHSHNQNHNHNGRGNHHHHHHHQVGTQPSNNPMNNME 540

[Close]

BLAST of Spo02740.1 vs. TAIR (Arabidopsis)
Match: AT3G19090.1 (RNA-binding protein)

HSP 1 Score: 205.3 bits (521), Expect = 9.400e-53
Identity = 143/348 (41.09%), Postives = 196/348 (56.32%), Query Frame = 1


		  
Query: 203 NSGAKNNNGLSDNQ--KLINQVEYYFSDVNLATTDHLIRFINKDSEGFVPISVVASFKKI 262
           NS + + N LSD+   K++ QVEY F+D++L   + + + I+KD EG+VP+S +AS KKI
Sbjct: 131 NSSSSSKNLLSDDLRLKIVKQVEYQFTDMSLLANESISKHISKDPEGYVPVSYIASTKKI 190

Query: 263 KALINSNSQLAAILRNSTKLVVSEDGKKVKRLHPLTGSDMEELQARIIVAENLPDDHCHQ 322
           KAL +++  ++  LR+S+KLVVSEDGKKVKR    T  D EELQ R +VAENLPDDH +Q
Sbjct: 191 KALTSNHHLVSLALRSSSKLVVSEDGKKVKRTSQFTDRDREELQGRTVVAENLPDDHSYQ 250

Query: 323 KLMKVFSAVGSVKSIRTCQPQPSNNGTSSASRPSKTDNMLYCNKLHAFVEYESVELAEKA 382
            L K+F  VG+VK+IR C P  SN     +SRP    + L  NK+HA +EY++  +A+KA
Sbjct: 251 NLEKIFGVVGNVKAIRICHPPESN-----SSRPK--GDFLMSNKIHALIEYDNTVIADKA 310

Query: 383 IAELNDEGNWRNGLRVRSLLKPGSKAAPARGKKSGNEGEVTCEEEDVSTSEQNQNEKQSE 442
           + +LNDE NWR GLRVR LL+                    C  + V      +N +  +
Sbjct: 311 VEKLNDERNWRKGLRVRLLLR--------------------CSPKSVL-----KNRRNFD 370

Query: 443 NLSKQSDVQAYEQGE--------EQSLEKDGGQKKSR---NRGRGKGRGRGHHQNNRGHH 502
            +    ++ +YE GE        E  L+ DG          +GRGKGRGR       G  
Sbjct: 371 GILIDDELPSYESGEDSPRLHLTESQLDNDGDDNNVGGLWGKGRGKGRGRSPRSYAVGGG 430

Query: 503 VGSPPVNNFMNGEHPVVA-------KQQPPGPRMPDGTRGFSMGRGKP 531
             S  +   ++   P +        K    GPRMPDGTRGF+MGRGKP
Sbjct: 431 GRSFGIGLGVSLGIPSLGSHESSSPKTATKGPRMPDGTRGFTMGRGKP 446

[Close]

BLAST of Spo02740.1 vs. TAIR (Arabidopsis)
Match: AT5G46250.1 (RNA-binding protein)

HSP 1 Score: 193.0 bits (489), Expect = 4.800e-49
Identity = 140/353 (39.66%), Postives = 207/353 (58.64%), Query Frame = 1


		  
Query: 186 DQQEGVGQ-QDKDHGQGNNSGAKNNNGLSD-NQKLINQVEYYFSDVNLATTDHLIRFINK 245
           D +   G+ +D+DHG+           + + NQK+I QVEYYFSD NL T   L+  + +
Sbjct: 73  DHERNSGEDRDQDHGENPVETDGVVVPIDELNQKIIRQVEYYFSDENLPTDKFLLNAMKR 132

Query: 246 DSEGFVPISVVASFKKIKALINSNSQLAAILRNSTKLVVSEDGKKVKRLHPLTGSDMEEL 305
           + +GFVPIS +A+F K+K L   ++ + + L+ S+ LVVS D KKVKRL PL   ++ + 
Sbjct: 133 NKKGFVPISTIATFHKMKKLTRDHALIVSALKESSFLVVSADEKKVKRLSPL--PEIRDP 192

Query: 306 QARIIVAENLPDDHCHQKLMKVFSAVGSVKSIRTCQPQPSNNGTSSASRPSKTDNMLYCN 365
           +   ++ ENLP+DH ++ + ++F   GS+KS+  C P    N    + +  K +N +   
Sbjct: 193 KIFTVLVENLPEDHSNENIREIFGKAGSIKSVSICDP----NAVEESEKGGKKENFIR-T 252

Query: 366 KLHAFVEYESVELAEKAIAELNDEGNWRNGLRVRSLLKPGSKAA---PARGKKSGNEGEV 425
           +LHAFVEYE+VE AEKA A LN+E +WRNGLRV+ L +   K A   PAR ++   E + 
Sbjct: 253 RLHAFVEYETVEAAEKAAATLNNEQDWRNGLRVKLLEQAAGKFAQRRPAR-REVDKEKDT 312

Query: 426 TCEEEDVSTSEQNQNEKQSEN-LSKQSDVQAYEQGEEQSLEKDGGQKKSRNRGRGKGRG- 485
           T    D +  E+N+  ++ +N     SD  A + G     +K+G      N+GR  G+G 
Sbjct: 313 TGRVHDQTGGEKNKKTREHQNHRLHHSDNPADDDGGNHQKDKNG------NKGRVVGQGR 372

Query: 486 RGHHQNNRGHHVGSPPVNNFMNGEHPVVAKQQPPGPRMPDGTRGFSMGRGKPI 532
           R +HQ   G   G+   ++  N  HPV   ++PPGPRMPDGTRGF+MGRGK I
Sbjct: 373 RQNHQGGNGIGHGTASSSSHPN-YHPVEVSKRPPGPRMPDGTRGFTMGRGKAI 410

[Close]

BLAST of Spo02740.1 vs. TAIR (Arabidopsis)
Match: AT4G32720.1 (La protein 1)

HSP 1 Score: 64.7 bits (156), Expect = 2.000e-10
Identity = 41/133 (30.83%), Postives = 68/133 (51.13%), Query Frame = 1


		  
Query: 218 LINQVEYYFSDVNLATTDHLIRFINKDSEGFVPISVVASFKKIKALI------------N 277
           ++ QVE+YFSD NL   D L + + +  +G V ++++ SF K++  +            +
Sbjct: 14  VLRQVEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGYLKLGDSKGDDIPED 73

Query: 278 SNSQLAAILRNSTKLVVSEDGKKVKRLHPLTGSD--MEELQARIIVAENLPDDHCHQKLM 337
           +   +A  LR S+ L +S+DGKKV R   L   +  +E+L AR + A     D   + + 
Sbjct: 74  TIKAVADTLRTSSALKISDDGKKVGRSTELLKLEDLIEQLNARTVAASPFSYDVKREDVE 133

[Close]

BLAST of Spo02740.1 vs. TAIR (Arabidopsis)
Match: AT1G79880.1 (RNA recognition motif (RRM)-containing protein)

HSP 1 Score: 57.0 bits (136), Expect = 4.200e-8
Identity = 41/135 (30.37%), Postives = 68/135 (50.37%), Query Frame = 1


		  
Query: 216 QKLINQVEYYFSDVNLATTDHLIRFINKDSEGFVPISVVASFKKIKALI---NSN----- 275
           +KL+ QVE+YFSD NL T   L R + K  +G V + +V SF +++ L+   N N     
Sbjct: 11  KKLLTQVEFYFSDSNLPTDGFLNREVTKSKDGLVSLPLVCSFSRMRNLLGLGNINREDIP 70

Query: 276 ----SQLAAILRNSTKLVVSEDGKKVKRLHPLTGSD--MEELQARIIVAENLPDDHCHQK 335
                ++A +LR S  L VS +G+++ R   L+  +  +E++  R + A         + 
Sbjct: 71  PRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLSKPEEVLEQVHRRTLAASPFEYSIKMED 130

Query: 336 LMKVFSAVGSVKSIR 337
           +   FS    V S+R
Sbjct: 131 VSSFFSQYAKVNSVR 145

The following BLAST results are available for this feature:

BLAST of Spo02740.1 vs. NCBI nr
BLAST of Spo02740.1 vs. UniProtKB/TrEMBL
BLAST of Spo02740.1 vs. ExPASy Swiss-Prot
BLAST of Spo02740.1 vs. TAIR (Arabidopsis)

BLAST of Spo02740.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902180801\|gb\|KNA09628.1\|	5.0e-290	100.	hypothetical protein SOVF_1518...	[more]
gi\|731323601\|ref\|XP_010672517.1\|	5.3e-199	73.1	PREDICTED: la-related protein ...	[more]
gi\|567899098\|ref\|XP_006442037.1\|	1.9e-132	57.1	hypothetical protein CICLE_v10...	[more]
gi\|641832581\|gb\|KDO51613.1\|	1.6e-131	56.4	hypothetical protein CISIN_1g0...	[more]
gi\|568880450\|ref\|XP_006493132.1\|	2.1e-131	56.8	PREDICTED: la-related protein ...	[more]

BLAST of Spo02740.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QSH5_SPIOL	3.5e-290	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8FI93_BETVU	3.7e-199	73.1	Uncharacterized protein OS=Bet...	[more]
V4TPF1_9ROSI	1.3e-132	57.1	Uncharacterized protein OS=Cit...	[more]
A0A067E956_CITSI	1.1e-131	56.4	Uncharacterized protein OS=Cit...	[more]
A0A067E8U6_CITSI	2.8e-130	56.1	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo02740.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
LRP6B_ARATH	5.7e-100	48.6	La-related protein 6B OS=Arabi...	[more]
LRP6C_ARATH	1.7e-51	41.0	La-related protein 6C OS=Arabi...	[more]
LRP6A_ARATH	8.6e-48	39.6	La-related protein 6A OS=Arabi...	[more]
LARP7_XENTR	7.1e-10	26.8	La-related protein 7 OS=Xenopu...	[more]
LARP7_HUMAN	2.1e-9	27.6	La-related protein 7 OS=Homo s...	[more]

BLAST of Spo02740.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT2G43970.1	3.2e-101	48.6	RNA-binding protein	[more]
AT3G19090.1	9.4e-53	41.0	RNA-binding protein	[more]
AT5G46250.1	4.8e-49	39.6	RNA-binding protein	[more]
AT4G32720.1	2.0e-10	30.8	La protein 1	[more]
AT1G79880.1	4.2e-8	30.3	RNA recognition motif (RRM)-co...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 306..397 score: 8
IPR002344	Lupus La protein	PRINTS	PR00302	LUPUSLA	coord: 221..238 score: 3.0E-8coord: 363..381 score: 3.0E-8coord: 278..291 score: 3.0E-8coord: 247..262 score: 3.
IPR006630	RNA-binding protein Lupus La	PFAM	PF05383	La	coord: 219..276 score: 1.9
IPR006630	RNA-binding protein Lupus La	SMART	SM00715	la	coord: 212..292 score: 8.0
IPR006630	RNA-binding protein Lupus La	PROFILE	PS50961	HTH_LA	coord: 208..299 score: 22
IPR011991	Winged helix-turn-helix DNA-binding domain	GENE3D	1.10.10.10		coord: 214..295 score: 4.0
IPR011991	Winged helix-turn-helix DNA-binding domain	unknown	SSF46785	"Winged helix" DNA-binding domain	coord: 215..302 score: 3.17
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	3.30.70.330		coord: 158..173 score: 1.2E-10coord: 305..386 score: 1.2
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 301..386 score: 2.1
None	No IPR available	PANTHER	PTHR22792	LUPUS LA PROTEIN-RELATED	coord: 202..535 score: 7.1E-209coord: 22..162 score: 7.1E
None	No IPR available	PANTHER	PTHR22792:SF52	LA-RELATED PROTEIN 6B	coord: 22..162 score: 7.1E-209coord: 202..535 score: 7.1E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005634	nucleus
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003723	RNA binding