Spo02972.1 (mRNA)

Overview
NameSpo02972.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionTranslational activator GCN1
LocationSpoScf_03075 : 4293 .. 18064 (-)
Sequence length564
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAAGGCGCCGCCTAAGTCGTCGAGGATACGGTCAGGACACGGTTCTCGAGATGTTTCTGGTGTTCCCATGGTGGTTGCGGCGGCGAGTTGGGGAGGAGATAGAAAATGTTAGTTTGGGAGAGAACAGGGGTATGTGCCTGTTTGAGAAGGGTTTGCGATTTGTAGGCCACCTTTCTACTTCTTTTGTTTTTATTTTGTGTGCGACTTTGTCGACTATTTTCCCCTTCGTCACGTTTCTCTCTCTTCTTTTCATTTCTTTTTTCCGTGCTTTATTTTCTAGGTCAAATACGAAGTAATATATTTCGTGTATTTTTTAAAACTATTTATTTTTGAGTTTCCTATTCTATTATACCTCGTCTGTCTTTTTTTTTTAACGACGTTAGCGATTTTCACATATTTCAATGAATAATTAGTGTGTGGCTCGGGCGATACCCCGATTGCTACATCGAATAGTTAAAATTTTAGATTTTTTTTGAGCAAAATATTTGATAAGATACATGTATAGGATTAAGTGAAAACATTCATCAAGTTCGTCAACTACACAAACACACTAAGTCATTTATCATGAGAAATAATTTTTCAATTGCATCATCTTACAATTTGTATAATTTGTTTTCTAGTGGAAATAAGTGATTCAAAATTAACAAACACCAAATTAGACATATGTTGTCATGCAAGGCATTTTTGTAGTTGATGCTTATGAGACTTATGACATCATGTTTATTCATGGTTGTCCTAGAAAATAAAAAGTCACATAAAAGTTTAGTTGTTGTAAACTTCATGTTAACATTCATTTATAAATTAGTGTGAAGAGATAAATCACAAACGGTTGTTGGTTAAGATGGTAATGAGATTTATCCTCCACATTTGAGGTCTAGAGTTCGAATCTCATTGTACGTATTGATTTTTGGTTGTCCATGATATGACATATCATTTGGTGAGTGGATGATGTGGCGCAAAAGGAAGAGTACTACGTGCCACATATACATTTTTCTCAACGCCTTTTAATATATTAGTATAGATTTTGATCATTAATATCTTTAATTTTCTATAACCAAATATTATAAAAAGTTGATACAAAATTTTAGGCAAGGCGGTCGAAATGACACCAATAATGACACGCAGTTGCTGACATAATGTTGCATCAACAGTATATATAGTATGAGGTCATAATTAACAATACTATATACAACTAAGAATGGTTGGTAGAATAAGGATGGTTTACTGGTATGCAGCTACAAGTATCTTGAGATTGTAAGAGCATGTACATTGGGGATTTCGGGGTGACTCTCCAAGTAGTTCTCCAACAAAAACTATCTCTTGACCAACATTGGGGCTCTTAAGTAGCTCTTCAGGGAGAGATACTTCAAGATAGCTCTTGGGCAAGACACCTCCAAAATTGATTCTTGTTGAAAAGTGGAGAATAACTTTGGTTGTGAAAGACAATTAATTATGACATATGGACCACCAAATAGTAAAAAATATATTGGAGATCTCTTTTGAAGAACCAACGTGAATGAAATATGTCCTTCACCCAAGGTGCATTAGTCTAATACCAAGGTTCTGACTAATTACGAACAATTAATTCAGTGAGATCAAGTGATCGGAACAGCTAGCTGGAGCAATGCTTTCGATCAATGAGTTCTAATCTATATTAGGCTCACAACTTACTCTTGACTGAACCTATAAGGTCACACCAATGGCATGTAACAGATCATCGGATTAAATGAATCGGAAATTCACTTAATAAGCTTTTCGGGAATTAGTTCGGAAAAACATAAATATACGATATGACATTGGATCGGAATCGTATATCGTATCGCTAATATTCGTAAGATAGGCGAAATAAATAATCCTATCGTATGACAGTGATTCGTCAAGTACTATACCATAAACAATAGCCGTAAGCCGTTGGTCGCGGATACGAGCGAGACGAGGCGGCCGGCCCATCGAGCCAAGCGCGCAAGGCCCAACGAGCTAGCAGCTCGCCAGCAGCGAGAGCAAGCCCGCAAGGCCACGGCTGGGCGTGCGCGGACAGCAGCGATGACAGCAAGCAAGCATTGACGCCCAAGACCCACGGCTGTGTTTCCTTGTGCGCGCTGCTTCGTGGGCTTGTGCGTGTAGCTGGCCGGTTGAGGCCTTGTGTCTTGGCCGGTCATGTTATAACCTTAGGGTTATAACACACCACCTCTCCTTAATGTTTTTCAACCACAACACAATTCTAATTCTACGTAGTTCAGTAAAACCTAATCAAAGAGAAACCCTAATTCTCTCTTTGCCTCCGTTCATACTGTACTTCCCTAAAAGCTAAAAACTCTTGAGTGACGTCTAAACTACGAATCTCAAGACGGATCTGAACGTGTCGGTGAACCAAGTAGAGGAACGACATTTGGAGTTCTTTGTTCATGTTCGTGATNAGACGGATCTGAACGTGTCGGTGAACCAAGTAGAGGAACGACATTTGGAGTTCTTTGTTCATGTTCGTGATTCGTTGAACTAGGGAAAACACGCTNTTGAGTGACGTCTAAACTACGAATCTCAAGACGGATCTGAACGTGTCGGTGAACCAAGTAGAGGAACGACATTTGGAGTTCTTTGTTCATGTTCGTGATTCGTTGAACTAGGGAAAACACGCTTCGAATATAAGTTTGTTTAATCTGTACTTTATACATGCTTCCTGGCTTTGGGGATTATTCCGCTGCGTTAATATGTATTTAACTGTATTCCCCTACAGTGGTATCATGAGCAACATGTATTTAAGTATTTTTTAGCATGTTAATATGTTTTTGGTGTTGTCGAATTTTTCTGAATCTTTTCATGAATTTACGAAATATTTCTGGATTAATGGATAGATCGTAGAATATGTGCTGAATTCAAAAATTGTCAGAAATCTGATTTTTCTGACCCTAATATGATTGAAAATGGCGTTTTAAAATCAACTCATGAGAACAGAATCACAAAAGCAGGCCCCAAAGTTTGAGTTTTTGGGAGTTTTTGTTAATTAATGAATTAAATTAACGATTTTGGAAAGTTTTTCGATTAATTTCTTAACCTAAACTACTCGGAATTAATTGGAAATTTTCCCTACTGTTCTTGGGTATATTTTCAAATTATGGTAAAATTTTTGGCCAAAAATGTTAAGTATAAACCCTAATTTTATTTTCCCCTAAATTGGTGATTTTTAGACCGTAAATTGATTTTTTAAATAATTCAGATCTGAGAATTTGTTTAATTGGGAAAGGGAATATAATTTCATATTAAGTGATAGTTTCAAAAATTTATTGGATTAAAATTTTGATTAGATTCGTAAATTTGAATCAACACTTAAACCAAATTGATAAAAATCTGAAATTTAAATGTTTAGAACGATTTGAAATTTTGGATTGGATTATCTAATATGTTCAAATTTTTTTTGATAATGATCGTTCGTTAAATTTGAATGTTGTTAGCCAAGATTTAACAAATTTCTCAAAATTGGATTGTTGAAAAATTAATTAAATCACCCACTTTGTTATTTTTCGAAAATAAAACGATTAATTTTGTTAATTTCAAGAAAAATAACTCATGCAAATAAAGTTCCGTGAAATTAATTTTTTTTAATTAATTGGCTTGTATGGCACGAGCCAAAGGCGCGGAACATGGGTGTGCGCCTACTGTGCGGTGCGTGTGGCTGGGCGTATCCCATGTGCGCTGCCTCCCCGTAGCTTGGCGCAGCAACGCGAGGCATCCAACAAGCGAGCTGGGCGTGCCAGCGTGCACTGGCCGAAGCAGCGAGCAAGTCAACAGCTGTGCCTTGGCTCAACGACGAAGCATCGAGCAAGCAAGGCACAACGCTGGCCTTGGCTTGCGAGCAGCGACGGGCAAAGCAGCAGCAGCAGCGAGCCTTGGCTTGCGGGGATGTGTGCTGTGCTTTGCGAGGCAGGGGCGATGCTCCTCGAGGCCTCGTATGGCACGCAATGCACTAGGCGATGTTGGGATGGGCGCAAAGCCCGTGTTGCACAAATTGGCTATTTTGTTCGTTTGGGCTTTAAATTTAATTTTTGCATGAAATTGCTAACAGTGGATTTTTTATTTATTTATTTTATTTAAAATTGGGCCGGGCTGTGAGTTTAATTAAATATTTAATTTTAAATTATCCAAATTAAAATATCGGTTTAAGTGGGAGCCATTTAATGAAATTAAATGAAATAATTAATTTTAATTATTTTCGTAGGGCACCATTATTTTAATTAAATTAAATTTTGATTAAAATAAATTCTAAGGATTACTAATTCGGAATTGATTGATCTTTTAGGACGCGTTTTATGTGAACGTGATTTTTAAATAAATCATGTAAATACTTGCATATTTATTTGGGCCATTCGTTTTAGGATACGAATGGATGAATGCATAGAATGTATATTTTATGTATTGCAGGTACTCAAAGTGACTAGTATGGCCAATCTAGGATAGTTAAATACGGTCTGCGTACCGTTTTATCTTTGAATGTAAAGTTTTAAATATGGACTGCAAACCATTGAAAATTTGATGTAATTATTTAATTATTTCAAGTATTTCTAGGAAGTTTAGAACTTTAAGTTAGCCTATTGAATGAAGTTCAAGACGATGCCAAGCTAACAAGGTGAAGAAGATTGGATGCTTCAAGACAAAGTTTTGGGTCATACTAGTTCACCAAAATTAATTTATGCACTATATATATTGTGAATGAATGTATATTATGCATGAATGTTGTTTGTATTCTCGATTAGATTTAGTTCCCTAAATAATCGAACCAACATAGAAACAACTAGGTCCAAGTAATATTGAGTTTAAAATTGCCTTCCAAATCAAGCACTTACAAAAATCTAGGGATCTAAGGTAGTAGGTTTCAGCCAAAGCGAGGTGCTATTTTAGTTGACTTAGATGGTAAGGTATCCCAAAGGAAAACGTTGATTGTGGTTTTAACTCAAACAACAATGGCATATGTTGTGGCAAAGGGATAAATTATGGTATTAATTTATTAACCAAGAGTAATTTGGAGATTACTAGCAATAGGTTTTGCTTACCTAGAATCTTAAAAGACTTAAGACATGCCCAAGCTTCTTAAGGATTTAGGAATTTAGGGTCTTGGAATCGTTTCATTCATTTATGGACCATGTTTTACTTTTGCATGAATGAAATGCTTAATAGCTTTAATGATTGCATGATCGCATTTATTTCAAAGTTATTAAAGGTTATGAATGGTTATTTATTGAGAATTCTTTTCAAATGTAGTAATCAAATGGCCGCAAACAATAACAACTCGTTCAACTTACGTTAAATTCTCGACAAAGAGAAGTTGAATGGCAACAATTTCCTCGACTGGCAAAGGAACTTGCAAATTGTTCTAATGCATGAGGAAAAAGAATATGTCCTTGAGGAAGAGTTACCACAGGCCGCCGGGCCGGAGGTGACTCAAGCTGCCTTTAACCGTTGGATTCAGGCCAACAGGGATGTCAAATGTGTGATGCTTGCATCCATGAATCCTGAACTTCAGAAAACGTTCATTAACTCGGATGCTTACCAAATCATCTCGGAGTTGAAGAACATGTTTCAGGATCAGACCAGAATTGAAAGATTCGAGACTCAAATGTTGATCCTTGAGACTAAGCTCAAGAAAGGAGAACTAGTGAGCCCACATGTTCTTAAGATGATTGGATTGTTTGAGAACATGATAGCTCTAGATTCCGACGTTTCAAATGAAATGGCCATTGACATCATTCTCCATTCATTTCATAGTGGATATGATCAGTTTAAGTTGAATTACAATATGAACAGTATGGAGAAAACTCTTACTGAGCTTCACGGTATGATGAAAACCGCTGAAAAGACGCTCAAGCAAGAGAATAAGCATGACATGCTTATGGTGCGTAAGGGCAAGGGCATCAAGAAATTTGGCAAGGGAAAGGGCAAGAAGGGTAAGGGCAAGGTTGCGCCCACACCTAAGTCCAACGGCACCAGTTCTGGTAAACAGAAAAGGGTGACTCGTTCTCCTGTCAACTCTGGATGCTTCTACTGCAAGAAGAAGGGGCATTGGAAGAGGGATTGCTTGAAGAGAAAGGAAGAACGGGAATGTTGCTTCTACTTCAGGTATGTATGTTATACATTGTAATCTTGCAAATTCTACTTCTTGGTTATTAGATACTGGTTGTGGCTCACACTTATGTTCCAATTCGCAGGGACTAAGGAGAAGTAGAAAGCTTGATAAAGGCGAGATGGACCTACGCGTGGGAAATGGAGCACGGATTACTGCATTAGCTGTAGGATTTTATTTTATATCTTTGCCTAGTGGTTTTGTTTTGGAACTAGAAAACTGTTACTATGTTCCTAGTATCACCAGAAATATTATTTCCGTTTCAAGTTTGGATTCTAAAGGTTTTAGTTTTCAATTTAAAGACAATAGTTGTTCTTTTTCTTTGAATGGAATGTTTTATGGTTCAGCGCAATAAGAAAATGGTCAGTACAACAAGAAAATGGTCTATATGTGCTAGATACAAGCAAACACATTTATAACATAAATACCAAAAGGCTAAAACTGGTGATTCCGATCTCACATATATGTGGCATTGTCGATTAGGCCATATAAACACAAAGAGCATGGAAAGACTTCAAAGGAAGGGCACTCTAGAATCAATTGACTTAGAGAAGATTGATAAATGCGAATCTTGTTTACTTGGCAAAATGACAAAGCGACCTTTCTCAAAGTTGGGAGAAAGAGCAAGCGAACTACTAGGGCTAATACATACGGACGTATGTGGGCCTATGAGTACGAAAGCTAGAGGTGATTTCAGCTATTTCATAATGTTTACGGACGATTTCAGTAGATATGGCTATATTTACTTCATGAAACACAAGTCTGAATCGTTTGAGAAATTCCGAGAATTTCAAAATGAAGTAGAGAATCAAAATGGCAAGAAAATCAAAGCTCTAAGATCAGATCGAGGAGGTGAATATCTTAGCCACGAGCTTGATGACCATCTAAAAGAATGCGGTATTCTTTCTGAATTGACTACTCCGGAGACACCTCAATGGAATGGAGTGTCAGAACGGAGAAACAGGACCTTACTCGATATGGTCAGGTCAATGATGGGTCAAGCCAAACTTCCTTTACAATTTTGGGGACATGCGTTGTAAACAACAGTACTCACACTGAATCGTTCTCCGTCAAAAGCCGTTGAAAAGACTCCATACGAATTATGGACTAAAAAACTTCCAAAGTTGTATTTTCTAAAGATTTGGGGTTGCGAAGCATATGTCAAGCGATTAATTTCGGACAAGATCGAACCAAAATCTGACAAATATGTCTCCGTTGGGTATCCAAAAGAAACTAAGGGGTATTAATTACTTCTACAATAAGTCAGAGAACAAGGTATTCGTTGCTCGCGACGGTGTCTTTTTGGAAAGAACTCACATTTCCAAAATGACAAGTGGGAGAATAATAGACCTCGAAGAGATTCAAGACGAACAAGGAACCAAGAACTCTTTAGAAACAGCTCAAGGTGAAAAACCTCCAAGGCCTTTAGAAGAGCCAGTGGGAGTAGTTCCTCAAGACGTTGTTGCCCCTCGTAGGTCACATAGAACTAAGGTTCAGCCGGACAGATGGACAGGCGTCCTCTTGACTGAAAAATTAGAAGTTCTTATATTAGATAGTGATTAACCTATGACCTACAAGCAAGCTATGACTAGCCAAGCTCCACTAAATTGTTAGAGGCCATGAAATCTTAGATAGACTCCAGTATGAAAGTCAAGTCTGGGATTTGGTAGATTTGCCGGATGGGTTTACACCTATCGGATGCAAATGGGTCTTCAAATTGAAGAAATACAAGGATGGAATTGTATACATGTACAAGGATAGATTGGTAGCAAAAGGTTACAGACAAGTTCACATCGTTGAGTACGATGAAACATTTTCTCCAGTCGCTATGCTTAAGTCTATTCGGATAATCCTTGCGATTGTCGCGTTTCATGACTATGAAATATGGCAAATGGATGTCAAAACTGCCTTCTTGAATGGTGTTCTTGAAGAGACTGTGTTTATGACACAGTCGGAGGGTTTTGTCGATCAAAAGAATCAAGGAAAGGTATGACAGCTAAAGAAATCCATCTATGGATGAAAGCAGGCATCAAGGAGCTGGAATATACGATTTGATGAAGCAGTCAATAAGTTTGGCTTCATCAAGAATCAGGACGAATCTTGTGTATAAAAGAAAGTCAGTGGGAGTAAAATTGCATTCCTAGTCTTGTATGTAGACGACATACTGCTTATTGGAAACGACATTCCTATGGTGGAGTCTGTAAAGAGAGTTGGCTTGTAAAGTGTTTCTCAATGAAAGACTTAGGAGAGGCACAATACATATTGGGCATCAAGATCTATAGGGATAGATGTAAGAAGATGATTGGACTAAGCCAAAGCACTTACATTGACAAAGTGCTAGCTAGGTTCAATATGATGGGAGCCAAGATAGGTCATCTACCCATGTCACATGACACATATCTAAGAAAGACTCAGTGTCCCAAGGCATCTGATGAGCGTAGAAGGATGAGTGAGACTCCACACGCTTTGGATATTGGATCCATCATGTATGCAATGATTTGTACAAGGCCGGATGTTTCGTTTGCACTTAGTGCAACGAGCAGGTACTAGTCAGACTCAGGTGAGGCGCATTGGACTGATGCAAAGAATATCCTAAAGCATCTGAAAAGGACAAAGGATCAGTTTCTGGTCAATGGTGGTACAAATGAGTTGATAGTTAGAGGCTATACGGAAACAAGCTTTCAAACCGACATAGATGATTTCAGATCACAATCTGGTTTTGTGTTCTGCCTTAATGGCGGAGCAGTAAGCTAGAAAAGTGCTAAGCAAAGCACTATTGCGGATTCTACAACTGAAGCCGAGTACATTGCTGCCTCAGAAGCAGCACGGAAGCTATTTGGATTCGAAGGTGCATCGAAGAACTTGGGGTTGTCCCCTCCATTAAAGGACCAATGGCTTTGTATTGCAACAATAACGGAGCCATTGCCCAGGCAAAGGAGCCTAGGAGCCACCAGAAGTCCAAGCACGTACTACGACGATTTCACATACTTCGAGAAATCGTTGAAAGGAAAGAAATCGAGATTTACAAGGTTGGAACTGACGACAAAGTCGCAGATCCATTGACTAAACCGTTGTCACAAGTGAAGCACAACGCACATGTAGAAACCATGGGAATCAAGCATGTTAGAGAATGGCTTTGATTTTCTTACTTTTGTTTTGGAACATCTGTTAGATCTGTGTTCAAAACAATTGGTTTAACCATTTCATATTTATGAAATTCTTTATTTCATATTCATTTAATTTGGTTTAGTATTAAATGAAAAGTCCAAGTGATTCAAAACATTCAAATGGGATGTCAAGATGGATTCTTCGACAAAGAAACACCCATAAGTGAACTTGAACATTGAAGTCACAAGGGATCCCTAATCTAGGTCATTGAAAGGTGGACGGCCAATGACTAATGAAGATTAAATTGCAAGTAGATTTGTAGTTCGGTTTCTTGAACTAGATTGACTGGATCTCAAAATCTTTTGCATAGATACTTATTGGATCTTGTATCGGATTGACCATGAGAACACTTTAAGAGATTAAATTCATGTCATAAGAAATTCTCATTAATGGTGATTAGAACCATTCCTCAGGACATGAGTAATTATGATTGCTCGTTTTAAGATTAAATCGCTCTAATGCTCGCAAAACGTCGCACCGTAAAAGGAGGCTATAAAAGCAGTTATTGGGCGTACTATGAATCAAAGTGAGTGTTCATAGATTGCAAGAATGGATTGCCCTCATATCCTTGATAGGATATGGGGTTGTTGTGTAACAAGGCCTCTCAGAGAGTTAGATATATACTGTGAAAATGAATGGTCGTGCTCATAATGGTTAAGGCTTAACCTTCTGTAAAAGTTTAATAGTTGCACTCAGTAATCCGAGAAACACTTCTGGACCTAATAAGGATGGCTTGGATCTTACCTTATGTTCAGCAAGTAACACTAAGTGACAAAGGAATGTGAATGCACACTTGTCTGAATAACAAGTGGGAGAATGAAGGAAATATTTCCTTCACCCAAGGTGCATTATTCTAATACCAAGGTTCAGATTAATTACGAACCATTAATTCAGTGGAGATCAAGTGATCGGAAAAGCTAGCTGGAGCAATGCTTTCGATCAGTGAGTTCTAATCTATATTAGGCTCACAGCTTACTCTTGACTGAACCTATAAGGTCACACCAATGGCATGTAACAGATCATCGGATTAAATGAATCAAAAATTCATTTAATAAGCTTTTCGGGAATTAGTTCGGAAAAACATAAATATACAATATGACGTTGGATCGGAATTGTATATCATATCGCAAATATTCGTAAGCTAGGCAAAACAAATAATCGTATCGTACGATGGTGATTCTTCAAGTACTATAAGATAAACAATAGCCGTAAGGCGTTGGTCGCGGATACGAGCGAGACAAGGCTGCCGGCCCATGGAGCCAAGCGCGCAAGGCCCAATGAGCCAGCAGCTCGCCAACAGCGAGAGCAAGCCCGCAAGGCCACAACTGGGCGCGCGCGGACAACAGCGATGGAAGCAAGCAAGCAGCGAAGCCCAAGGCCCACAACTGTGTTGCCTTGTGGGCACTGCTTTGTGGGCTTGTGCGTGTAGCTGGCCGGTTGAGGCCTTGTGCCTTGGCCGGTCATGTTATAACCTTAGGGTTATAACACACCACCTCTACTTAATGTTTTTCCAACACAACACAATTCTAACTCTACGTAGTCAGTAAAACCTAATCAAAGAGAAATCCTAATTCTCTCTTTGCCTCCGTTCATACTATTCTTCCTAAAAGCTAAAAACTCTTGAGTGACGTCTAAGCTACGAATCTCAAGACGGATCTGAATGTGTCGGTGAACCAAGTAGATGAACGACATTTGGGGTTCTTTGTTCGTGTTCGTGATTTGTTTAACTAGGGAAAACACGCTTCGAATGTAAGTTTGCTTAATCTGTACTTTATACACTAGTAGAAAAATCCTTATAAGTGGCTCATCAAAAGTTGCCCTTGTCAAACAAGGGCAACCTTTAAGAAATAAAAAATAAAAAACAATAAAAAAAATTCTGAAATATTTTCCCTCCTAAACGTTAAGCGCAGCTTTTGCCCTAACATTTTGCTCCCCTTCATTCTTTTCTCTCTCGCAGTACACTCCTCCATACTTCTCCTCCAGAATTCATCACCGGCCAGCTTCACCACCGGCCAGCATCAACACCGGCTTATCAGTCACTCTTCGTCGGCCGTTCTTCGCAGTCAATCTTCGTCGGCCATTCGTCGCAGCAGCAGCCCGAGTCTAGCTACGTCTTCCTCTGCGTCATCTTCACCGGCGACGAGGTTATCCTCTTCAATTTCCTGGGCTTTGCTCAATTTGTTGTTTTTGGGTCAATTTGCAATGACTTTATTTTGTTAATTTGATGTGGGTGTGTTTGATTTATGTCTGGTGTTAATTGGGGCTTTAGAAAATTCAACAGTTCTATAATTTTTGTTTTTTTTTTCCGACTTTTTGTTGGTTTCTGCTAAATTGATTGATTCTGGGATACTGGGAATGCTGCATAATAAATCAAACTCCGTAACATCGAGATGAAACACTATGTTGTACATATAAACTACAGAAACACAAGAATTGAAAACCTGTCAACAAACTAAACTACAGATGAAAACCTGTCAACAAGTGGTATCAGCAGCATCAAGCCCTCACTGGAACAGATGAAACCAGTATTGACAAACTAAACAAACTAAACTTGCTCACTCTTAGTGCTTAACTAACTGAACAGAATACTGGAGGGTTAGGGGTTGATGGGTTTGAAGGCAGGGGTTGCAGGGCTGATGGGTCAGATATAGGCTGCAGGATCAGGTTCAAACATGGATTATAACGTCAGGTTCAGGTTTGGGCTGCAGGGTTGATTGTTACTTCTTTAGGAGAATACTGGTGGTCTAGGGAAACCCTACAGAAGTAAGGGTTTCTAGTGCAACAAGAATAGAAATTAAGGAGAGGAGTGTACTGTTCCAAAAAGGCACAAACAGGGAGAAATTACACTAAGTAATTCTGATTTCAGAAGGCTGAATAGGAGGTGTCTAATATGGCTTGTCAGTTGCAACTGGCTTTATTTTTGTGTCTAAATGGTTGGTATAAGTTGTGTTGTTCAAGAATATTACCTTTGTTTAACAAGTTAATTAAGTTTGTCTTTTCACTCTGGATTCTTTGATAGTTTCATTTAATAAATAACTTGTTTTCCTTAACTTGGGTGGAATATAAAATATAAGGCTGGTTGATAAAATAAAAGGGAAGATGTGAACAACATAGGCACCGCGCTAGCTGGTCAGTGTGTGCGATTCTAATAATGATCTCGTTTTTGGTTTTCTTGAATGGTTGGGCAGCTCATTTAGTTTGATTTTATTCTATAATTCAAGTTGCAACAACCCCTTTGACTTGAGATGTCTGATGCAGCTATCCATGCAGTTCTATATCAAGTGAAAAAATGGGTGGAAACCAATGATGTCTAAGTGGAAAATTGAATATAGTGGTTCTAGCTTACAGTGGGGGCTGGGGTATATTCAAACTCCTATTTGTGTTAATGTGGATTATTTAGGATTTTTTTGTATAGTTAACATGCTTACTGCTTCTAGATACTTGATAAATGTCTTTATTCTACTAAAATAATAGTTTTAAATAAAGCAATACAATAATTAACATAGTAGTTTAACTTGAGACAATTAGTATAGGTTTAAAATCAAGGAATTATTTCAATGGAAGAAACTGATTTACCTGAATAAACGATCATTCTGTTAAAACCCCGTGTGAGAACGTAATGTCCTGTGTCCTTGTTTCGGCACAATATGTCAGATTAAAGCCTTTACTTTGTGAAACTGGTTTTGCTGTTTTTTTTCCATCATTTATTTTAATGAATAAGAAAATTGAGGTTGTTGATTGTTTAAGTTGATCCCAATGGAGATGTTCGTAGGAGAATGATCAATGCTGGCATATTGATCATATACAAACATAGGAGAGATAACGTTTCCTTGTTATTTCCAATTTTTGAGAACTATCTCAATACAAAGGTTAAATGATTACGGATTATTATCTATACTCTTCTTTTAGGATTGTACCTTCAGTTTCTCATATTTTACGACTATTTGAAACATCTTAATTTGATATGCGTCGTATTTTTGTTCGTTATTTAGGCTTCTGATGAGGAAACGTACGATCTTGTCCGTGAAGGTGTAGTTATTTTTACTGGAGCTTTGGCGAAACATTTGGGAAAGGTGCTGTGAATTTTTGTTTCTCCTCCAGTTATTATTTTGATTATTGTGCGATTGGATCTAAAATTTTCTATCTAACAGGATGACCTTAAAGTCCATTCGGTTGTTGAGAAGTTGCTTGATGTGCTCAATACTCCCTCTGAAGTTGTGCAGAGGGCTGTCTCTTCTTGCTTGTCTCCACTAATGTCATCTAAACAGGTATCCAAAATATCGCCAACTTAGTGTTTCCTGTGGATAATTTTTTACCTGTGCATAGCATTTGGGCATGGATTTCTAGACCCTACAGGATTTGATGAGGTTTAATAAGCCACCAAAACATGGATTATGCTGACCCTATTGCCGAATGTGACCACCAGCTTGTCCTTACATTGCTTGTGGCACATTTTACACTTCTATCAGAGTGTAAATCAGCAGCAG

mRNA sequence

ATGGCAAAGGCGCCGCCTAAGTCGTCGAGGATACGGTCAGGACACGGTTCTCGAGATGTTTCTGGTGTTCCCATGGTGGTTGCGGCGGCGAGTTGGGGAGGAGATAGAAAATTTAACATGCTTACTGCTTCTAGATACTTGATAAATGCTTCTGATGAGGAAACGTACGATCTTGTCCGTGAAGGTGTAGTTATTTTTACTGGAGCTTTGGCGAAACATTTGGGAAAGGATGACCTTAAAGTCCATTCGGTTGTTGAGAAGTTGCTTGATGTGCTCAATACTCCCTCTGAAGTTGTGCAGAGGGCTGTCTCTTCTTGCTTGTCTCCACTAATGTCATCTAAACAGGTATCCAAAATATCGCCAACTTAGTGTTTCCTGTGGATAATTTTTTACCTGTGCATAGCATTTGGGCATGGATTTCTAGACCCTACAGGATTTGATGAGGTTTAATAAGCCACCAAAACATGGATTATGCTGACCCTATTGCCGAATGTGACCACCAGCTTGTCCTTACATTGCTTGTGGCACATTTTACACTTCTATCAGAGTGTAAATCAGCAGCAG

Coding sequence (CDS)

ATGGCAAAGGCGCCGCCTAAGTCGTCGAGGATACGGTCAGGACACGGTTCTCGAGATGTTTCTGGTGTTCCCATGGTGGTTGCGGCGGCGAGTTGGGGAGGAGATAGAAAATTTAACATGCTTACTGCTTCTAGATACTTGATAAATGCTTCTGATGAGGAAACGTACGATCTTGTCCGTGAAGGTGTAGTTATTTTTACTGGAGCTTTGGCGAAACATTTGGGAAAGGATGACCTTAAAGTCCATTCGGTTGTTGAGAAGTTGCTTGATGTGCTCAATACTCCCTCTGAAGTTGTGCAGAGGGCTGTCTCTTCTTGCTTGTCTCCACTAATGTCATCTAAACAGGTATCCAAAATATCGCCAACTTAG

Protein sequence

MAKAPPKSSRIRSGHGSRDVSGVPMVVAAASWGGDRKFNMLTASRYLINASDEETYDLVREGVVIFTGALAKHLGKDDLKVHSVVEKLLDVLNTPSEVVQRAVSSCLSPLMSSKQVSKISPT
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo02972Spo02972gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo02972.1Spo02972.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo02972.1.CDS.4Spo02972.1.CDS.4CDS
Spo02972.1.CDS.3Spo02972.1.CDS.3CDS
Spo02972.1.CDS.2Spo02972.1.CDS.2CDS
Spo02972.1.CDS.1Spo02972.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo02972.1.utr3p.1Spo02972.1.utr3p.1three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo02972.1.exon.4Spo02972.1.exon.4exon
Spo02972.1.exon.3Spo02972.1.exon.3exon
Spo02972.1.exon.2Spo02972.1.exon.2exon
Spo02972.1.exon.1Spo02972.1.exon.1exon


Homology
[Close]
BLAST of Spo02972.1 vs. NCBI nr
Match: gi|944222974|gb|KQK87378.1| (hypothetical protein SETIT_039987mg, partial [Setaria italica])

HSP 1 Score: 119.4 bits (298), Expect = 4.400e-24
Identity = 62/69 (89.86%), Postives = 63/69 (91.30%), Query Frame = 1 

		  

Query: 47   LINASDEETYDLVREGVVIFTGALAKHLGKDDLKVHSVVEKLLDVLNTPSEVVQRAVSSC 106
            LI ASDEETYDLVREGVVIFTGALAKHL KDD KVHSV+EKLLDVLNTPSE VQRAVS C
Sbjct: 1193 LIIASDEETYDLVREGVVIFTGALAKHLSKDDPKVHSVIEKLLDVLNTPSEAVQRAVSDC 1252

Query: 107  LSPLMSSKQ 116
            LSPLM SKQ
Sbjct: 1253 LSPLMVSKQ 1261
[Close]
BLAST of Spo02972.1 vs. NCBI nr
Match: gi|731326887|ref|XP_010674246.1| (PREDICTED: translational activator GCN1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 118.6 bits (296), Expect = 7.500e-24
Identity = 61/66 (92.42%), Postives = 62/66 (93.94%), Query Frame = 1 

		  

Query: 50   ASDEETYDLVREGVVIFTGALAKHLGKDDLKVHSVVEKLLDVLNTPSEVVQRAVSSCLSP 109
            ASDEE YDLVREGVVIFTGALAKHLGKDD KVH+VVEKLLDVLNTPSE VQRAVSSCLSP
Sbjct: 1250 ASDEEQYDLVREGVVIFTGALAKHLGKDDPKVHAVVEKLLDVLNTPSEAVQRAVSSCLSP 1309

Query: 110  LMSSKQ 116
            LM SKQ
Sbjct: 1310 LMPSKQ 1315
[Close]
BLAST of Spo02972.1 vs. NCBI nr
Match: gi|242038321|ref|XP_002466555.1| (hypothetical protein SORBIDRAFT_01g009860 [Sorghum bicolor])

HSP 1 Score: 118.2 bits (295), Expect = 9.800e-24
Identity = 60/69 (86.96%), Postives = 63/69 (91.30%), Query Frame = 1 

		  

Query: 47   LINASDEETYDLVREGVVIFTGALAKHLGKDDLKVHSVVEKLLDVLNTPSEVVQRAVSSC 106
            ++ ASDEETYDLVREGVVIFTGALAKHL KDD KVHSV+EKLLDVLNTPSE VQRAVS C
Sbjct: 1195 IVLASDEETYDLVREGVVIFTGALAKHLSKDDPKVHSVIEKLLDVLNTPSEAVQRAVSDC 1254

Query: 107  LSPLMSSKQ 116
            LSPLM SKQ
Sbjct: 1255 LSPLMVSKQ 1263
[Close]
BLAST of Spo02972.1 vs. NCBI nr
Match: gi|763777653|gb|KJB44776.1| (hypothetical protein B456_007G272000 [Gossypium raimondii])

HSP 1 Score: 118.2 bits (295), Expect = 9.800e-24
Identity = 61/66 (92.42%), Postives = 62/66 (93.94%), Query Frame = 1 

		  

Query: 50   ASDEETYDLVREGVVIFTGALAKHLGKDDLKVHSVVEKLLDVLNTPSEVVQRAVSSCLSP 109
            ASDEE YDLVREGVVIFTGALAKHL KDD KVH+VVEKLLDVLNTPSE VQRAVSSCLSP
Sbjct: 1255 ASDEEKYDLVREGVVIFTGALAKHLAKDDPKVHAVVEKLLDVLNTPSEAVQRAVSSCLSP 1314

Query: 110  LMSSKQ 116
            LMSSKQ
Sbjct: 1315 LMSSKQ 1320
[Close]
BLAST of Spo02972.1 vs. NCBI nr
Match: gi|823195700|ref|XP_012492707.1| (PREDICTED: translational activator GCN1 [Gossypium raimondii])

HSP 1 Score: 118.2 bits (295), Expect = 9.800e-24
Identity = 61/66 (92.42%), Postives = 62/66 (93.94%), Query Frame = 1 

		  

Query: 50   ASDEETYDLVREGVVIFTGALAKHLGKDDLKVHSVVEKLLDVLNTPSEVVQRAVSSCLSP 109
            ASDEE YDLVREGVVIFTGALAKHL KDD KVH+VVEKLLDVLNTPSE VQRAVSSCLSP
Sbjct: 1255 ASDEEKYDLVREGVVIFTGALAKHLAKDDPKVHAVVEKLLDVLNTPSEAVQRAVSSCLSP 1314

Query: 110  LMSSKQ 116
            LMSSKQ
Sbjct: 1315 LMSSKQ 1320
[Close]
BLAST of Spo02972.1 vs. UniProtKB/TrEMBL
Match: K4AM52_SETIT (Uncharacterized protein OS=Setaria italica GN=SETIT_039987mg PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.100e-24
Identity = 62/69 (89.86%), Postives = 63/69 (91.30%), Query Frame = 1 

		  

Query: 47   LINASDEETYDLVREGVVIFTGALAKHLGKDDLKVHSVVEKLLDVLNTPSEVVQRAVSSC 106
            LI ASDEETYDLVREGVVIFTGALAKHL KDD KVHSV+EKLLDVLNTPSE VQRAVS C
Sbjct: 1193 LIIASDEETYDLVREGVVIFTGALAKHLSKDDPKVHSVIEKLLDVLNTPSEAVQRAVSDC 1252

Query: 107  LSPLMSSKQ 116
            LSPLM SKQ
Sbjct: 1253 LSPLMVSKQ 1261
[Close]
BLAST of Spo02972.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CK20_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g077290 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 5.200e-24
Identity = 61/66 (92.42%), Postives = 62/66 (93.94%), Query Frame = 1 

		  

Query: 50   ASDEETYDLVREGVVIFTGALAKHLGKDDLKVHSVVEKLLDVLNTPSEVVQRAVSSCLSP 109
            ASDEE YDLVREGVVIFTGALAKHLGKDD KVH+VVEKLLDVLNTPSE VQRAVSSCLSP
Sbjct: 1250 ASDEEQYDLVREGVVIFTGALAKHLGKDDPKVHAVVEKLLDVLNTPSEAVQRAVSSCLSP 1309

Query: 110  LMSSKQ 116
            LM SKQ
Sbjct: 1310 LMPSKQ 1315
[Close]
BLAST of Spo02972.1 vs. UniProtKB/TrEMBL
Match: C5WMX8_SORBI (Putative uncharacterized protein Sb01g009860 OS=Sorghum bicolor GN=Sb01g009860 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.800e-24
Identity = 60/69 (86.96%), Postives = 63/69 (91.30%), Query Frame = 1 

		  

Query: 47   LINASDEETYDLVREGVVIFTGALAKHLGKDDLKVHSVVEKLLDVLNTPSEVVQRAVSSC 106
            ++ ASDEETYDLVREGVVIFTGALAKHL KDD KVHSV+EKLLDVLNTPSE VQRAVS C
Sbjct: 1195 IVLASDEETYDLVREGVVIFTGALAKHLSKDDPKVHSVIEKLLDVLNTPSEAVQRAVSDC 1254

Query: 107  LSPLMSSKQ 116
            LSPLM SKQ
Sbjct: 1255 LSPLMVSKQ 1263
[Close]
BLAST of Spo02972.1 vs. UniProtKB/TrEMBL
Match: A0A0D2SRV9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G272000 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.800e-24
Identity = 61/66 (92.42%), Postives = 62/66 (93.94%), Query Frame = 1 

		  

Query: 50   ASDEETYDLVREGVVIFTGALAKHLGKDDLKVHSVVEKLLDVLNTPSEVVQRAVSSCLSP 109
            ASDEE YDLVREGVVIFTGALAKHL KDD KVH+VVEKLLDVLNTPSE VQRAVSSCLSP
Sbjct: 1255 ASDEEKYDLVREGVVIFTGALAKHLAKDDPKVHAVVEKLLDVLNTPSEAVQRAVSSCLSP 1314

Query: 110  LMSSKQ 116
            LMSSKQ
Sbjct: 1315 LMSSKQ 1320
[Close]
BLAST of Spo02972.1 vs. UniProtKB/TrEMBL
Match: A0A0D2SRV4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G272000 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.800e-24
Identity = 61/66 (92.42%), Postives = 62/66 (93.94%), Query Frame = 1 

		  

Query: 50   ASDEETYDLVREGVVIFTGALAKHLGKDDLKVHSVVEKLLDVLNTPSEVVQRAVSSCLSP 109
            ASDEE YDLVREGVVIFTGALAKHL KDD KVH+VVEKLLDVLNTPSE VQRAVSSCLSP
Sbjct: 1255 ASDEEKYDLVREGVVIFTGALAKHLAKDDPKVHAVVEKLLDVLNTPSEAVQRAVSSCLSP 1314

Query: 110  LMSSKQ 116
            LMSSKQ
Sbjct: 1315 LMSSKQ 1320
[Close]
BLAST of Spo02972.1 vs. ExPASy Swiss-Prot
Match: GCN1_HUMAN (eIF-2-alpha kinase activator GCN1 OS=Homo sapiens GN=GCN1 PE=1 SV=6)

HSP 1 Score: 71.2 bits (173), Expect = 8.600e-12
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 1 

		  

Query: 46   YLINASDEETYDLVREGVVIFTGALAKHLGKDDLKVHSVVEKLLDVLNTPSEVVQRAVSS 105
            +L NA ++ +YD VR+ VV+  G+LAKHL K D KV  +V KL+  L+TPS+ VQ +V+S
Sbjct: 1302 FLKNAPNDASYDAVRQSVVVLMGSLAKHLDKSDPKVKPIVAKLIAALSTPSQQVQESVAS 1361

Query: 106  CLSPLM 112
            CL PL+
Sbjct: 1362 CLPPLV 1367
[Close]
BLAST of Spo02972.1 vs. ExPASy Swiss-Prot
Match: GCN1_MOUSE (eIF-2-alpha kinase activator GCN1 OS=Mus musculus GN=Gcn1 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.300e-11
Identity = 33/66 (50.00%), Postives = 48/66 (72.73%), Query Frame = 1 

		  

Query: 46   YLINASDEETYDLVREGVVIFTGALAKHLGKDDLKVHSVVEKLLDVLNTPSEVVQRAVSS 105
            +L +A ++ +YD VR+ VV+  G+LAKHL K D KV  +V KL+  L+TPS+ VQ +V+S
Sbjct: 1302 FLKDAPNDASYDAVRQSVVVLMGSLAKHLDKSDPKVKPIVAKLIAALSTPSQQVQESVAS 1361

Query: 106  CLSPLM 112
            CL PL+
Sbjct: 1362 CLPPLV 1367
[Close]
BLAST of Spo02972.1 vs. ExPASy Swiss-Prot
Match: GCN1_YEAST (eIF-2-alpha kinase activator GCN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GCN1 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 6.800e-9
Identity = 26/62 (41.94%), Postives = 44/62 (70.97%), Query Frame = 1 

		  

Query: 50   ASDEETYDLVREGVVIFTGALAKHLGKDDLKVHSVVEKLLDVLNTPSEVVQRAVSSCLSP 109
            A    T   ++E V+I  G LA+HL + D ++H+++E+LL  L+TPS  +Q+AVS+C++P
Sbjct: 1255 ALSSSTDSALKENVIILYGTLARHLQQSDARIHTIIERLLSTLDTPSADIQQAVSACIAP 1314

Query: 110  LM 112
            L+
Sbjct: 1315 LV 1316
[Close]
BLAST of Spo02972.1 vs. ExPASy Swiss-Prot
Match: GCN1_DICDI (eIF-2-alpha kinase activator GCN1 OS=Dictyostelium discoideum GN=gcn1 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.200e-7
Identity = 32/75 (42.67%), Postives = 48/75 (64.00%), Query Frame = 1 

		  

Query: 49   NASDEETYDLVREGVVIFTGALAKHLGKDDLKVHSVVEKLLDVLNTPSEVVQRAVSSCLS 108
            N + EE  D +R  VV++ GALAKH+   + KV  V++KL+D L+ PSE VQ  +S C++
Sbjct: 1305 NGTGEE--DSIRANVVVYMGALAKHMDASNPKVSIVIDKLVDALSIPSESVQVGISKCIA 1364

Query: 109  PLMSS--KQVSKISP 122
             L+ S  KQ  ++ P
Sbjct: 1365 QLIPSFKKQGDRLIP 1377
[Close]
BLAST of Spo02972.1 vs. ExPASy Swiss-Prot
Match: GCN1_SCHPO (eIF-2-alpha kinase activator gcn1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gcn1 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.400e-6
Identity = 26/64 (40.62%), Postives = 42/64 (65.62%), Query Frame = 1 

		  

Query: 48   INASDEETYDLVREGVVIFTGALAKHLGKDDLKVHSVVEKLLDVLNTPSEVVQRAVSSCL 107
            +++   +  D +RE  V+  G +A+HL  +D ++  V++ LL VL+TPSE VQ AV+ CL
Sbjct: 1288 VDSLPTDANDRLREATVVLFGTVAQHLPSNDPRLAVVMDSLLSVLSTPSESVQLAVAVCL 1347

Query: 108  SPLM 112
             PL+
Sbjct: 1348 PPLV 1351
[Close]
BLAST of Spo02972.1 vs. TAIR (Arabidopsis)
Match: AT1G64790.2 (ILITYHIA)

HSP 1 Score: 109.8 bits (273), Expect = 1.200e-24
Identity = 56/66 (84.85%), Postives = 61/66 (92.42%), Query Frame = 1 

		  

Query: 50   ASDEETYDLVREGVVIFTGALAKHLGKDDLKVHSVVEKLLDVLNTPSEVVQRAVSSCLSP 109
            ASDEE YDLVREGVVIFTGALAKHL +DD KVH+VVEKLL+VLNTPSE VQRAVS+CLSP
Sbjct: 1329 ASDEEEYDLVREGVVIFTGALAKHLARDDPKVHNVVEKLLEVLNTPSESVQRAVSTCLSP 1388

Query: 110  LMSSKQ 116
            L+ SKQ
Sbjct: 1389 LVLSKQ 1394
The following BLAST results are available for this feature:
BLAST of Spo02972.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|944222974|gb|KQK87378.1|4.4e-2489.8hypothetical protein SETIT_039... [more]
gi|731326887|ref|XP_010674246.1|7.5e-2492.4PREDICTED: translational activ... [more]
gi|242038321|ref|XP_002466555.1|9.8e-2486.9hypothetical protein SORBIDRAF... [more]
gi|763777653|gb|KJB44776.1|9.8e-2492.4hypothetical protein B456_007G... [more]
gi|823195700|ref|XP_012492707.1|9.8e-2492.4PREDICTED: translational activ... [more]
back to top
BLAST of Spo02972.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
K4AM52_SETIT3.1e-2489.8Uncharacterized protein OS=Set... [more]
A0A0J8CK20_BETVU5.2e-2492.4Uncharacterized protein OS=Bet... [more]
C5WMX8_SORBI6.8e-2486.9Putative uncharacterized prote... [more]
A0A0D2SRV9_GOSRA6.8e-2492.4Uncharacterized protein OS=Gos... [more]
A0A0D2SRV4_GOSRA6.8e-2492.4Uncharacterized protein OS=Gos... [more]
back to top
BLAST of Spo02972.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
GCN1_HUMAN8.6e-1251.5eIF-2-alpha kinase activator G... [more]
GCN1_MOUSE3.3e-1150.0eIF-2-alpha kinase activator G... [more]
GCN1_YEAST6.8e-941.9eIF-2-alpha kinase activator G... [more]
GCN1_DICDI2.2e-742.6eIF-2-alpha kinase activator G... [more]
GCN1_SCHPO2.4e-640.6eIF-2-alpha kinase activator g... [more]
back to top
BLAST of Spo02972.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G64790.21.2e-2484.8ILITYHIA[more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 47..118
score: 7.4
IPR016024Armadillo-type foldunknownSSF48371ARM repeatcoord: 51..112
score: 5.7
IPR026827Proteasome component Ecm29/Translational activator Gcn1PANTHERPTHR23346TRANSLATIONAL ACTIVATOR GCN1-RELATEDcoord: 45..115
score: 1.7

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0033554 cellular response to stress
biological_process GO:0033674 positive regulation of kinase activity
biological_process GO:0006417 regulation of translation
biological_process GO:0006869 lipid transport
molecular_function GO:0005488 binding
molecular_function GO:0019901 protein kinase binding
molecular_function GO:0019887 protein kinase regulator activity
molecular_function GO:0043022 ribosome binding
molecular_function GO:0005319 lipid transporter activity