Spo03006.1 (mRNA) | SpinachBase

Overview


Name	Spo03006.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Transmembrane protein, putative
Location	chr1 : 30298920 .. 30303538 (+)
Sequence length	1359

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATTTGCAGAGAGGAGAGAGAAATTTGGGCAAAAATGGCGAGAATTGGAGTTGCCTATTTGATCCGTTCTCAAGCAACTCAGCTCATTTCCAGAAACGTTTCTTCAGGTGCACATTTTTTTTCCCCATATAAACTTATGCCTTTTGCTTCAAATACTAGAAATGTCCTCAGTTTTTTTGAAAGTTTGGTTTGAATCCTATAAATTTCTTCGTAATACAGAAATCAGAACCTTTATGAAGTATCCAGTTCATTTTTTTTATATGAGATGTTGGATGTATCGTAGTTTTTATGTGGAAATGAATTAGGTTAGGTTAAGGGTGCTACAAATTGGAAGATAGTTTGAGTTTGTTTAATTTAATGCTTAAAGAACGATTAGCAATGATGGAAATGCTACTTTGAATTGTTACTGTGTGATATTGATATAGTTATGTAGTTACTTGTATAATTAGAAAATGGTGCAATTTCTCATTTTTTGGGGGTGTTGTCTAGCCCTTATTCTTCGGACTCGGATAGACATATTATTGGATTCCTAAAGCGAAATATTTGTGAGGTCTCTTAGACTTTTCATGGTTGAGAATAGATTTGAATGGAAAGGGAATTTAATTATAGCTTGGCATTGCTTAGGGTTTGAGGTAATTCGAAGACGAAATGTTTGTAGATGTGAGCGAGATGAATTCAGGAAGATTGNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGACTGTATTAGGCCAAAGGGTTCTATTATGTGATTTCTGTCTTAATTTAGTAGATATGCTTTTGAAAATGATAACTGAGGATATTTTAATGACTATGTTGTGGTTGTTTATGTCAAGCCATACCTTGTTGGAAAGAGTTGAAGTTTGGTAAATGGTTTGGTGATCACTAAAGTCTGGAATTTGTTTTCTGCGGAGAATTTTTTTTAGAGGAACTAGAATCAGTTTTTGTTCCCCAAATTGTGGGTCAACATTGAATGGAAATTGCTAATCTTCCATTTTGGGTGTTACTGTGTTAGATATATGATTAATTTTCATTCCATCCTGATTGGAATGTAAAGAGTAATTTATACTTCCCTTAATGTGCCTAGGTGAACCTTGTTTAGCATATGTTCACTTATTCTGGATATATCTCATAAACCATTGTTGATAGTTGAGGGGGTAAGCTCCTCTAACTTGGACCAGTTGCACTTATAAGCGCAACCTAAAACTTTGAACCAGTTGCATTTTTTGAGCTCTCTTCTTTGTGTGAGAATACTTGATGATTTAAATGAGTGAGAATATGAGGGCTAAGATCCTTTTATTGAGTGGAAGTTTAACTTGTTTGATCCTCTCATGATTGGCGGTCTATTGGACCCTTTTCAGTTCTCCTATTACTTTGTTGTAACATTCTTTGATTCTTTCTATTTTGTCATTCTCTTCATTCGTCTTTTACTTTACTGCTGGCTGTTGATGTAGGAAAGTCTTTGTAATCAACTTCGTTTGTTGGTTCTCATGTTGATTAGCCTTGCTGGATTACCATACTCTTCCTTTATTGACGGGAGACTTGAAGAATTAAAACGATGATAAAAATAATTTCTTTTTAGAGAGAAAGATTCATGCTCATCAAAGATGGCCTTCTTTATGCACTTACTTTTTGCACTTTTTCCAGGATCTTTTGAGGTGGTGAATTGGTGATAATTTTAATACTTAGACGTCTCTTCTAGGTAGTTTAACTAGTACATTTGATGGTTCAATATTGCCCTCTTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGATGTTCAGAAAAATGGGAGGTTGGATACCTAACTCTGGTAGAAGACTTCTTATTTTTTGTTGGACTTTGTTGTAGAGAGTGGAATAGACACAACGAAGATAATATACTTGTGTAGTAAATTGTAGGTGAACTGGAGCCAAACTGCATGCAGCTTTACCTCCACGTTAGCCAAAGAAATTCCTTATTTCGTTCTTTCCTTCCTGCTTCTTCCTTTACAAATTTGTAAGGATAAGTTCTCTTTTCGGTGATACTAGCTTTGACTGCCTCTAAAAGGCATGAGGTCCATAGATTTCAGACTTTGTTCACATACTTGGCTCACATACTTAGGGATGTGAGAAGAACCAGCTGGCCACAACAGATAAATAAGATTGAGACAGCAAATAAGAAAAGAACTGGAGGATTTTGATAAATGAATACTCAAGAACAGATTACAAAAGTAGTAGCTTGAGGCTACAAGTCTCCAAGTCAGTAGCTTTAGGCTACAAATCTCTATTCCTAACACCAAAATTCCATGCCTTTCTCTTTCCTATCTTCTTCTATTGATGCACTAGGGTTGTCCAGTACAGTGCCTTTAATTAATGTGCTCCTGCTCTTCTTTGTCTTCTAGTTGGTTAAAGGCTCTTCTCACCAGCCCCTGCTAGACTTGTGGTGTTGATGTGGGTGTTTACCCTACTTCTTGCATCTGTTGTAATGACAGTACAGTGCTCAGTGCTCTGGTGGTCCATGACACTTGATTTATTACAGGATGCTGTTAAATGTGAAAAGGTGTACATGATAGGGAGTAAGTGCGGGTTGATGTGGAGAGAAATGGAAAAGTTAATTTCAATTGCAAGTATAAACAGTTGTTTGGGACAACCCAAAATATTACAGTAAAACTGTAAAAGGATAGGAAGGAGTATATTGAATGCCCCCCTTGTTCAAAAGAAACATCTCCTGAGAATTTGCTCAGATATTGCTTTTTCGTTAAAGATTGTTGGAAATGATTTCCCAATTGCCTTTTAGCCACCCCTTTCTTTGGATTTTAAAGGTAAAAAAGGTCAATACTGTTGGCATCATAGAACAGAATGTCACGGAAGGGGGAAAATAGGCAAGTGTGGTCCAACCTAGGCCTAAGCATTTTGGCCTAACTGTCTCTCCATTTAAAAATTAGTGAATGTTATCAGTATATTATCAGAACTTTAGCCCTGTCCTGACTATGTATGCAATGAATCACCTGTTTTATTCGTAATAACATAGAAACTTACTGTTCATGATGAGACAAAATAGATTGAGCTGCTTCAAAGATAATGTGTTGACTCTATATACTCATCTTTTTAATGGGTGCATACTTTGTTACTGATTAGCTCGAGATTATGAGAATTATTTGGATGCACATCATATCCGTGACATATTTTTGTGACAATCTTCCTACCATTGTAGGATATGTTTTATGCAAGTCTTTCTATAGTCTTTTTGGTATTTGGTGTTGCATATTCTCATTTGTTAATCCACCATTTTCAGGTTACAACAGCTTTAGGTCAGAAGCACCGAGATTATACCCAAACACCGAATTATATTGTAGCTCTTCTATTCTGACTACTATCCAGAAGAGGTGGGCTTCTCACAGCCCTAAAACACAAGATGAAAGCAAGATTAGCATTGGACCGCGTAAAGGGCTAGAAGCTGGTGAAGATGGCAAGGATATTGGGGTAGCCTATTATGGTCCGATCTCATCTACTATCAGGAAAGTCAAGCTCCTCTCTCTCTCCACCTGCTGTTTATCCGTATCTCTGGGTCCTGTGATAACCTTTATGACATCCCCTGAGATGAATGTGATATTGAAAGGTGGTGTTGCATCTACTGTTATGTTCCTAAGTGCTACTACCACTGCTGCCCTTCATTGGTTTGTGAGCCCTTACATTCATAAGATCAGGTGGCAACCCGGTTCTGATACCTTTGAGGCAGAAATGATGTCGTGGTTGGCTACCCCATTAACCAAGACTGTCAAATTCGCTGATATAAGGATTGCAGAGACCAACAGGCCATACGTGTCGTTCAAAGCTAATGAAACATTCTATTACGTGGATCCAGACCACTGTCCAAACAAAGCTTTGCTTGCTAAATTGACTCCCCACAAATCTGCTAATGAATCAGCCTTCAAGAACTTGTGATTGAAAACTGTCCCAACAGTGATTTTGCAGATTATTTTCTACGTAAGTTGGTTTCTTTGAGCAATACTTAGTCTACAATAACCTTTTAAGTGAGTTAAACATCGCCAAATCAGCGGTAAAGCATACTGTGTTGAGATTTTGGGATTTTATCATTGAATAAATGTGTTTGTATTCTTCAAGTTTTTTGTTTATATTGATGTATGATGCTTAAAAGTGCATGAAATTTCTCCGAATTTGCAATGAGCAGATGCAGATGCTATTCCATGAGAAAACATTAATAATTTTTATTTTATTTTTCGCTTTTATCCGTCCCTCCTTGAGTCCTTACTTGCCCTTTTGTCACTGCCCACACCGAAAAGTGGGCAAAGCTTAATACATCAACAGCATATGCTCATAAAATACATTACCAGATTATGATAGGGTGCTATGATACTATGAAGCAGACCAGAATCGGTAAAGACTGAGAAAGTCAAAACCCCCAATATATGAACTTCAAATTTCAATCCAGATATTAGGAAGCTTTAAGAATTAGAACTTGGTACATTTTGGTTTGCCGATGAAAGTTAGGAAAATATAATTGAGAATTAACCAGCACTTCCCCC

mRNA sequence

GATTTGCAGAGAGGAGAGAGAAATTTGGGCAAAAATGGCGAGAATTGGAGTTGCCTATTTGATCCGTTCTCAAGCAACTCAGCTCATTTCCAGAAACGTTTCTTCAGGTTACAACAGCTTTAGGTCAGAAGCACCGAGATTATACCCAAACACCGAATTATATTGTAGCTCTTCTATTCTGACTACTATCCAGAAGAGGTGGGCTTCTCACAGCCCTAAAACACAAGATGAAAGCAAGATTAGCATTGGACCGCGTAAAGGGCTAGAAGCTGGTGAAGATGGCAAGGATATTGGGGTAGCCTATTATGGTCCGATCTCATCTACTATCAGGAAAGTCAAGCTCCTCTCTCTCTCCACCTGCTGTTTATCCGTATCTCTGGGTCCTGTGATAACCTTTATGACATCCCCTGAGATGAATGTGATATTGAAAGGTGGTGTTGCATCTACTGTTATGTTCCTAAGTGCTACTACCACTGCTGCCCTTCATTGGTTTGTGAGCCCTTACATTCATAAGATCAGGTGGCAACCCGGTTCTGATACCTTTGAGGCAGAAATGATGTCGTGGTTGGCTACCCCATTAACCAAGACTGTCAAATTCGCTGATATAAGGATTGCAGAGACCAACAGGCCATACGTGTCGTTCAAAGCTAATGAAACATTCTATTACGTGGATCCAGACCACTGTCCAAACAAAGCTTTGCTTGCTAAATTGACTCCCCACAAATCTGCTAATGAATCAGCCTTCAAGAACTTGTGATTGAAAACTGTCCCAACAGTGATTTTGCAGATTATTTTCTACGTAAGTTGGTTTCTTTGAGCAATACTTAGTCTACAATAACCTTTTAAGTGAGTTAAACATCGCCAAATCAGCGGTAAAGCATACTGTGTTGAGATTTTGGGATTTTATCATTGAATAAATGTGTTTGTATTCTTCAAGTTTTTTGTTTATATTGATGTATGATGCTTAAAAGTGCATGAAATTTCTCCGAATTTGCAATGAGCAGATGCAGATGCTATTCCATGAGAAAACATTAATAATTTTTATTTTATTTTTCGCTTTTATCCGTCCCTCCTTGAGTCCTTACTTGCCCTTTTGTCACTGCCCACACCGAAAAGTGGGCAAAGCTTAATACATCAACAGCATATGCTCATAAAATACATTACCAGATTATGATAGGGTGCTATGATACTATGAAGCAGACCAGAATCGGTAAAGACTGAGAAAGTCAAAACCCCCAATATATGAACTTCAAATTTCAATCCAGATATTAGGAAGCTTTAAGAATTAGAACTTGGTACATTTTGGTTTGCCGATGAAAGTTAGGAAAATATAATTGAGAATTAACCAGCACTTCCCCC

Coding sequence (CDS)

ATGGCGAGAATTGGAGTTGCCTATTTGATCCGTTCTCAAGCAACTCAGCTCATTTCCAGAAACGTTTCTTCAGGTTACAACAGCTTTAGGTCAGAAGCACCGAGATTATACCCAAACACCGAATTATATTGTAGCTCTTCTATTCTGACTACTATCCAGAAGAGGTGGGCTTCTCACAGCCCTAAAACACAAGATGAAAGCAAGATTAGCATTGGACCGCGTAAAGGGCTAGAAGCTGGTGAAGATGGCAAGGATATTGGGGTAGCCTATTATGGTCCGATCTCATCTACTATCAGGAAAGTCAAGCTCCTCTCTCTCTCCACCTGCTGTTTATCCGTATCTCTGGGTCCTGTGATAACCTTTATGACATCCCCTGAGATGAATGTGATATTGAAAGGTGGTGTTGCATCTACTGTTATGTTCCTAAGTGCTACTACCACTGCTGCCCTTCATTGGTTTGTGAGCCCTTACATTCATAAGATCAGGTGGCAACCCGGTTCTGATACCTTTGAGGCAGAAATGATGTCGTGGTTGGCTACCCCATTAACCAAGACTGTCAAATTCGCTGATATAAGGATTGCAGAGACCAACAGGCCATACGTGTCGTTCAAAGCTAATGAAACATTCTATTACGTGGATCCAGACCACTGTCCAAACAAAGCTTTGCTTGCTAAATTGACTCCCCACAAATCTGCTAATGAATCAGCCTTCAAGAACTTGTGA

Protein sequence

MARIGVAYLIRSQATQLISRNVSSGYNSFRSEAPRLYPNTELYCSSSILTTIQKRWASHSPKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVITFMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLATPLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKNL

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo03006	Spo03006	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo03006.1	Spo03006.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03006.1.exon.1	Spo03006.1.exon.1	exon
Spo03006.1.exon.2	Spo03006.1.exon.2	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03006.1.utr5p.1	Spo03006.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03006.1.CDS.1	Spo03006.1.CDS.1	CDS
Spo03006.1.CDS.2	Spo03006.1.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03006.1.utr3p.1	Spo03006.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo03006.1 vs. NCBI nr
Match: gi|902142453|gb|KNA04774.1| (hypothetical protein SOVF_196610 [Spinacia oleracea])

HSP 1 Score: 478.4 bits (1230), Expect = 7.300e-132
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 1


		  
Query: 1   MARIGVAYLIRSQATQLISRNVSSGYNSFRSEAPRLYPNTELYCSSSILTTIQKRWASHS 60
           MARIGVAYLIRSQATQLISRNVSSGYNSFRSEAPRLYPNTELYCSSSILTTIQKRWASHS
Sbjct: 1   MARIGVAYLIRSQATQLISRNVSSGYNSFRSEAPRLYPNTELYCSSSILTTIQKRWASHS 60

Query: 61  PKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVIT 120
           PKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVIT
Sbjct: 61  PKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVIT 120

Query: 121 FMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLAT 180
           FMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLAT
Sbjct: 121 FMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLAT 180

Query: 181 PLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKNL 240
           PLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKNL
Sbjct: 181 PLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKNL 240

[Close]

BLAST of Spo03006.1 vs. NCBI nr
Match: gi|731318321|ref|XP_010669656.1| (PREDICTED: uncharacterized protein LOC104886829 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 386.7 bits (992), Expect = 2.900e-104
Identity = 194/241 (80.50%), Postives = 219/241 (90.87%), Query Frame = 1


		  
Query: 1   MARIGVAYLIRSQATQLISRNV-SSGYNSFRSEAPRLYPNTELYCSSSILTTIQKRWASH 60
           MARI V + IR +A  LISR++ SSGY+SFRSEAPRL+ + E Y +SSILT+ QKRWASH
Sbjct: 1   MARIAVTHFIRCRANHLISRSLSSSGYSSFRSEAPRLHSSIETYYNSSILTSCQKRWASH 60

Query: 61  SPKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVI 120
           SPKTQD+SKISIGP K ++AGE+ KD  VAYYGPISSTI+KVKLLSLSTCCLSVSLGPVI
Sbjct: 61  SPKTQDDSKISIGPSKVVDAGEEEKDPRVAYYGPISSTIKKVKLLSLSTCCLSVSLGPVI 120

Query: 121 TFMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLA 180
           TFMTSP+MNVILKGGVA++V+F SA+TTA LHWFVSPYIHKIRWQPGSDTFEAEMMSWLA
Sbjct: 121 TFMTSPDMNVILKGGVAASVIFFSASTTAILHWFVSPYIHKIRWQPGSDTFEAEMMSWLA 180

Query: 181 TPLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKN 240
           TPLTKT++FADIRIAETNRP+V+FKANETFY+VD DHCPNKALLAKLTP KSA+ESA KN
Sbjct: 181 TPLTKTIRFADIRIAETNRPFVTFKANETFYFVDSDHCPNKALLAKLTPQKSAHESALKN 240

[Close]

BLAST of Spo03006.1 vs. NCBI nr
Match: gi|731318319|ref|XP_010669655.1| (PREDICTED: uncharacterized protein LOC104886829 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 386.0 bits (990), Expect = 4.900e-104
Identity = 194/243 (79.84%), Postives = 219/243 (90.12%), Query Frame = 1


		  
Query: 1   MARIGVAYLIRSQATQLISRNVSS---GYNSFRSEAPRLYPNTELYCSSSILTTIQKRWA 60
           MARI V + IR +A  LISR++SS   GY+SFRSEAPRL+ + E Y +SSILT+ QKRWA
Sbjct: 1   MARIAVTHFIRCRANHLISRSLSSSVSGYSSFRSEAPRLHSSIETYYNSSILTSCQKRWA 60

Query: 61  SHSPKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGP 120
           SHSPKTQD+SKISIGP K ++AGE+ KD  VAYYGPISSTI+KVKLLSLSTCCLSVSLGP
Sbjct: 61  SHSPKTQDDSKISIGPSKVVDAGEEEKDPRVAYYGPISSTIKKVKLLSLSTCCLSVSLGP 120

Query: 121 VITFMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSW 180
           VITFMTSP+MNVILKGGVA++V+F SA+TTA LHWFVSPYIHKIRWQPGSDTFEAEMMSW
Sbjct: 121 VITFMTSPDMNVILKGGVAASVIFFSASTTAILHWFVSPYIHKIRWQPGSDTFEAEMMSW 180

Query: 181 LATPLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAF 240
           LATPLTKT++FADIRIAETNRP+V+FKANETFY+VD DHCPNKALLAKLTP KSA+ESA 
Sbjct: 181 LATPLTKTIRFADIRIAETNRPFVTFKANETFYFVDSDHCPNKALLAKLTPQKSAHESAL 240

[Close]

BLAST of Spo03006.1 vs. NCBI nr
Match: gi|596001934|ref|XP_007218215.1| (hypothetical protein PRUPE_ppa010662mg [Prunus persica])

HSP 1 Score: 328.6 bits (841), Expect = 9.400e-87
Identity = 166/241 (68.88%), Postives = 196/241 (81.33%), Query Frame = 1


		  
Query: 1   MARIGVAYLIRSQATQLISRNVSSGYNSFRSEAPRLYPNTELYCSSSI-LTTIQKRWASH 60
           M R  + +L+RSQ+ QL S N+ SGY   RS A  L  NT+   +S   +   QKRWASH
Sbjct: 1   MTRAALFHLLRSQSKQLASSNLLSGYQPCRSGAWALGLNTKSGFNSGFDINASQKRWASH 60

Query: 61  SPKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVI 120
           +   +D+ KISIGPR+G E GEDGKD GV YYGPISSTI+KVKLLSLSTCCLSVSLGPVI
Sbjct: 61  ATTKEDDGKISIGPRRGGEVGEDGKDSGVVYYGPISSTIKKVKLLSLSTCCLSVSLGPVI 120

Query: 121 TFMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLA 180
           TFMTSP MNVILKG VAS+V+FLSA+TTAALHWFV+PYIHK+RW+PGSD+FE EM+SWLA
Sbjct: 121 TFMTSPGMNVILKGAVASSVIFLSASTTAALHWFVTPYIHKLRWKPGSDSFEVEMLSWLA 180

Query: 181 TPLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKN 240
           T + +T+KF+DIR AETNRP+V+FKAN  FY+VDPDHC NKALLA+LTP K+  ESAFKN
Sbjct: 181 TYIPRTIKFSDIRPAETNRPFVTFKANGNFYFVDPDHCHNKALLARLTPQKATQESAFKN 240

[Close]

BLAST of Spo03006.1 vs. NCBI nr
Match: gi|645255130|ref|XP_008233356.1| (PREDICTED: transmembrane protein 70 homolog, mitochondrial [Prunus mume])

HSP 1 Score: 328.2 bits (840), Expect = 1.200e-86
Identity = 166/241 (68.88%), Postives = 195/241 (80.91%), Query Frame = 1


		  
Query: 1   MARIGVAYLIRSQATQLISRNVSSGYNSFRSEAPRLYPNTELYCSSSI-LTTIQKRWASH 60
           M R  + +L+RSQ+ QL S N  SGY   RS A  L  NT+   +S   +   QKRWASH
Sbjct: 1   MTRAALFHLLRSQSKQLASSNFLSGYQPCRSGALALGLNTKPCFNSGFDINASQKRWASH 60

Query: 61  SPKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVI 120
           +   +D+ KISIGPR+G E GEDGKD GV YYGPISSTI+KVKLLSLSTCCLSVSLGPVI
Sbjct: 61  ATTKEDDGKISIGPRRGGEVGEDGKDSGVVYYGPISSTIKKVKLLSLSTCCLSVSLGPVI 120

Query: 121 TFMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLA 180
           TFMTSP MNVILKG VAS+V+FLSA+TTAALHWFV+PYIHK+RW+PGSD+FE EM+SWLA
Sbjct: 121 TFMTSPGMNVILKGAVASSVIFLSASTTAALHWFVTPYIHKLRWKPGSDSFEVEMLSWLA 180

Query: 181 TPLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKN 240
           T + +T+KF+DIR AETNRP+V+FKAN  FY+VDPDHC NKALLA+LTP K+  ESAFKN
Sbjct: 181 TYIPRTIKFSDIRPAETNRPFVTFKANGNFYFVDPDHCHNKALLARLTPQKATQESAFKN 240

[Close]

BLAST of Spo03006.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QBX2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_196610 PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 5.100e-132
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 1


		  
Query: 1   MARIGVAYLIRSQATQLISRNVSSGYNSFRSEAPRLYPNTELYCSSSILTTIQKRWASHS 60
           MARIGVAYLIRSQATQLISRNVSSGYNSFRSEAPRLYPNTELYCSSSILTTIQKRWASHS
Sbjct: 1   MARIGVAYLIRSQATQLISRNVSSGYNSFRSEAPRLYPNTELYCSSSILTTIQKRWASHS 60

Query: 61  PKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVIT 120
           PKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVIT
Sbjct: 61  PKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVIT 120

Query: 121 FMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLAT 180
           FMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLAT
Sbjct: 121 FMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLAT 180

Query: 181 PLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKNL 240
           PLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKNL
Sbjct: 181 PLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKNL 240

[Close]

BLAST of Spo03006.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CVR9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g036320 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 2.000e-104
Identity = 194/241 (80.50%), Postives = 219/241 (90.87%), Query Frame = 1


		  
Query: 1   MARIGVAYLIRSQATQLISRNV-SSGYNSFRSEAPRLYPNTELYCSSSILTTIQKRWASH 60
           MARI V + IR +A  LISR++ SSGY+SFRSEAPRL+ + E Y +SSILT+ QKRWASH
Sbjct: 1   MARIAVTHFIRCRANHLISRSLSSSGYSSFRSEAPRLHSSIETYYNSSILTSCQKRWASH 60

Query: 61  SPKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVI 120
           SPKTQD+SKISIGP K ++AGE+ KD  VAYYGPISSTI+KVKLLSLSTCCLSVSLGPVI
Sbjct: 61  SPKTQDDSKISIGPSKVVDAGEEEKDPRVAYYGPISSTIKKVKLLSLSTCCLSVSLGPVI 120

Query: 121 TFMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLA 180
           TFMTSP+MNVILKGGVA++V+F SA+TTA LHWFVSPYIHKIRWQPGSDTFEAEMMSWLA
Sbjct: 121 TFMTSPDMNVILKGGVAASVIFFSASTTAILHWFVSPYIHKIRWQPGSDTFEAEMMSWLA 180

Query: 181 TPLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKN 240
           TPLTKT++FADIRIAETNRP+V+FKANETFY+VD DHCPNKALLAKLTP KSA+ESA KN
Sbjct: 181 TPLTKTIRFADIRIAETNRPFVTFKANETFYFVDSDHCPNKALLAKLTPQKSAHESALKN 240

[Close]

BLAST of Spo03006.1 vs. UniProtKB/TrEMBL
Match: M5X0G2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010662mg PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 6.500e-87
Identity = 166/241 (68.88%), Postives = 196/241 (81.33%), Query Frame = 1


		  
Query: 1   MARIGVAYLIRSQATQLISRNVSSGYNSFRSEAPRLYPNTELYCSSSI-LTTIQKRWASH 60
           M R  + +L+RSQ+ QL S N+ SGY   RS A  L  NT+   +S   +   QKRWASH
Sbjct: 1   MTRAALFHLLRSQSKQLASSNLLSGYQPCRSGAWALGLNTKSGFNSGFDINASQKRWASH 60

Query: 61  SPKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVI 120
           +   +D+ KISIGPR+G E GEDGKD GV YYGPISSTI+KVKLLSLSTCCLSVSLGPVI
Sbjct: 61  ATTKEDDGKISIGPRRGGEVGEDGKDSGVVYYGPISSTIKKVKLLSLSTCCLSVSLGPVI 120

Query: 121 TFMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLA 180
           TFMTSP MNVILKG VAS+V+FLSA+TTAALHWFV+PYIHK+RW+PGSD+FE EM+SWLA
Sbjct: 121 TFMTSPGMNVILKGAVASSVIFLSASTTAALHWFVTPYIHKLRWKPGSDSFEVEMLSWLA 180

Query: 181 TPLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKN 240
           T + +T+KF+DIR AETNRP+V+FKAN  FY+VDPDHC NKALLA+LTP K+  ESAFKN
Sbjct: 181 TYIPRTIKFSDIRPAETNRPFVTFKANGNFYFVDPDHCHNKALLARLTPQKATQESAFKN 240

[Close]

BLAST of Spo03006.1 vs. UniProtKB/TrEMBL
Match: A0A0B0MH90_GOSAR (Transmembrane 70, mitochondrial OS=Gossypium arboreum GN=F383_21700 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 2.100e-85
Identity = 165/241 (68.46%), Postives = 195/241 (80.91%), Query Frame = 1


		  
Query: 1   MARIGVAYLIRSQATQLISRNVSSGYN-SFRSEAPRLYPNTELYCSSSILTTIQKRWASH 60
           MAR  + +L+RSQ+ QLISRN+ SGY   F + +   Y    L  ++SI + +QKRWAS 
Sbjct: 1   MARTALFHLLRSQSKQLISRNIHSGYRFRFATLSGTQYAKPNLNYATSIFS-VQKRWASQ 60

Query: 61  SPKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVI 120
           +  T+D  KISIGPRK  E  ED KD GV YYGPISSTI+KVK+LSLSTCCLSVSLGPVI
Sbjct: 61  AKTTEDGDKISIGPRKSKEDDEDEKDAGVVYYGPISSTIKKVKMLSLSTCCLSVSLGPVI 120

Query: 121 TFMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLA 180
           TFMTSP+MNVI+KG VAS+V+F SATTTAALHWFVSPYIHKIRWQPGSD+FE EMMSWLA
Sbjct: 121 TFMTSPDMNVIVKGAVASSVIFFSATTTAALHWFVSPYIHKIRWQPGSDSFEVEMMSWLA 180

Query: 181 TPLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKN 240
           T + +T+KFADIR AETNRP+V+FKAN  FY+VD +HC NKALLA+LTP K+ +ESA KN
Sbjct: 181 TYIPRTIKFADIRPAETNRPFVTFKANGNFYFVDAEHCHNKALLARLTPQKATHESALKN 240

[Close]

BLAST of Spo03006.1 vs. UniProtKB/TrEMBL
Match: A0A0D2RB28_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G204700 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.700e-85
Identity = 164/241 (68.05%), Postives = 198/241 (82.16%), Query Frame = 1


		  
Query: 1   MARIGVAYLIRSQATQLISRNVSSGYNS-FRSEAPRLYPNTELYCSSSILTTIQKRWASH 60
           MAR  + +L+RSQ+ QLISRN+ SGY   F + +   Y    L  ++SI + +QKRWAS 
Sbjct: 1   MARTALFHLLRSQSKQLISRNIHSGYRCRFATLSGTQYAKPNLNYATSIFS-VQKRWASQ 60

Query: 61  SPKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVI 120
           +  T+D++KISIGPRK  E  E+ KD GV Y+GPISSTI+KVK+LSLSTCCLSVSLGPVI
Sbjct: 61  AKTTEDDNKISIGPRKSKEDDENEKDAGVVYHGPISSTIKKVKMLSLSTCCLSVSLGPVI 120

Query: 121 TFMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLA 180
           TFMTSP+MNVI+KG VAS+V+FLSATTTAALHWFVSPYIHKIRWQPGSD+FE EMMSWLA
Sbjct: 121 TFMTSPDMNVIVKGAVASSVIFLSATTTAALHWFVSPYIHKIRWQPGSDSFEVEMMSWLA 180

Query: 181 TPLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKN 240
           T + +T+KFADIR AETNRP+V+FKAN  FY+VD +HC NKALLA+LTP K+ +ESA KN
Sbjct: 181 TYIPRTIKFADIRPAETNRPFVTFKANGNFYFVDAEHCHNKALLARLTPQKATHESALKN 240

[Close]

BLAST of Spo03006.1 vs. TAIR (Arabidopsis)
Match: AT2G35790.1 (unknown protein)

HSP 1 Score: 287.3 bits (734), Expect = 8.400e-78
Identity = 153/243 (62.96%), Postives = 183/243 (75.31%), Query Frame = 1


		  
Query: 1   MARIGVAYLIRSQATQLISRNVSSGYNSFRSEAPRLYPNTELYCSSSILTTIQKRWASHS 60
           M R  + +L+RSQ+ +L S   +SGY+  RS A     +        + +  Q+ WAS  
Sbjct: 1   MGRSALIHLLRSQSRRLSSSTFTSGYHH-RSIAGSWSSSVNPKVRFQVPSLSQRSWASFG 60

Query: 61  PKTQ---DESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGP 120
            KT+   DE KISIGP++  E     KD GV YYGPISSTI+KVKLLSLSTCCLSVSLGP
Sbjct: 61  AKTREDDDEHKISIGPQEKKEE----KDGGVVYYGPISSTIKKVKLLSLSTCCLSVSLGP 120

Query: 121 VITFMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSW 180
           VITFMTSP +NVI+KG VASTV+FLSA+TTAALHWFVSPY+HK+RWQPGSDTFE EMM+W
Sbjct: 121 VITFMTSPGLNVIMKGAVASTVIFLSASTTAALHWFVSPYVHKLRWQPGSDTFEVEMMTW 180

Query: 181 LATPLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAF 240
           L T   KT+KF+DIR  +T RPYVSFKA+  FY+VD DHCPNKALLA+LTP K A++SAF
Sbjct: 181 LGTFSAKTLKFSDIRYPDTQRPYVSFKADGNFYFVDADHCPNKALLARLTPPKDAHDSAF 238

The following BLAST results are available for this feature:

BLAST of Spo03006.1 vs. NCBI nr
BLAST of Spo03006.1 vs. UniProtKB/TrEMBL
BLAST of Spo03006.1 vs. ExPASy Swiss-Prot
BLAST of Spo03006.1 vs. TAIR (Arabidopsis)

BLAST of Spo03006.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902142453\|gb\|KNA04774.1\|	7.3e-132	100.	hypothetical protein SOVF_1966...	[more]
gi\|731318321\|ref\|XP_010669656.1\|	2.9e-104	80.5	PREDICTED: uncharacterized pro...	[more]
gi\|731318319\|ref\|XP_010669655.1\|	4.9e-104	79.8	PREDICTED: uncharacterized pro...	[more]
gi\|596001934\|ref\|XP_007218215.1\|	9.4e-87	68.8	hypothetical protein PRUPE_ppa...	[more]
gi\|645255130\|ref\|XP_008233356.1\|	1.2e-86	68.8	PREDICTED: transmembrane prote...	[more]

BLAST of Spo03006.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QBX2_SPIOL	5.1e-132	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CVR9_BETVU	2.0e-104	80.5	Uncharacterized protein OS=Bet...	[more]
M5X0G2_PRUPE	6.5e-87	68.8	Uncharacterized protein OS=Pru...	[more]
A0A0B0MH90_GOSAR	2.1e-85	68.4	Transmembrane 70, mitochondria...	[more]
A0A0D2RB28_GOSRA	2.7e-85	68.0	Uncharacterized protein OS=Gos...	[more]

BLAST of Spo03006.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo03006.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT2G35790.1	8.4e-78	62.9	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009724	TMEM70 family	PANTHER	PTHR13281	UNCHARACTERIZED	coord: 4..239 score: 2.6
IPR009724	TMEM70 family	PFAM	PF06979	TMEM70	coord: 101..226 score: 3.1
None	No IPR available	PANTHER	PTHR13281:SF0	TRANSMEMBRANE PROTEIN 70, MITOCHONDRIAL	coord: 4..239 score: 2.6

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001510	RNA methylation
cellular_component	GO:0005739	mitochondrion