Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAATAATGCCGAAAACTCAAGCTTCTTTCAGTTCTAGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAATTTTTGCAAATTCCTTGCCTTGATTCACCACGGTCATTCTGGTACGTTCTAAACAATTTTGCGAATTTTCAATTCTGTTTTTCCATTTATATTTTTTTGAAATTACAGTTGTTAAGCCAATGATCTTTAGCAGACATTGAGCTACATTATTTTTCAGTAATTAATGTTGCAAAGTGAAACTTAAGTTGATGACTCAGTGATCATGTAGACTACTTGATAATTCTGAGAAATGTAGAACACAATGAGTCAATACTAAAGTTCCACATATTAGTTCTCAGACCTTGAAAGTTGAGAATACATACATGTTGCTCACTTTTGGTTACATTACAGGTCAAGTAAATTTACTGAAGCGCGTCTCATACAAGGAGTTAGATAAGGCGACAGATGGTTTCCGAAGAATCATTACTTGTGACTCTCAAAGCATAACCTATGAAGCTAAATTTCAAGATGGTTCTGTTTCTGTTGTGAAAGAAGTAAAAAGTGTTGGTCAAGGAAATGAGGTATTCCACAAGGAATTGCATCTTCTAGGACGTTTGCATCACCGACATGTTGTAGCACTTAGAGGTTATGCTGTTGGTCGTAGAAGGTCTGATCCCAATTCTTGTTTACTTTTCACATTGCAAGTATTAGAACAAGAATATATGAATTTATAAATTGTAGTAAATTTGAAGCATTTCAAAACTAAATCCACAAGTGTTACTGACAATAGATGATGTTGATTGTTGAGCAGTTTTACACTTTTCAGATGACAAAATGTTCTGAATATCATTTGAGACTCGGATAAATTTGTTCTTTCTGTAATTTTCCTCAACCTCTCTTTTTAGTTTCCTGGTTTTCGAGTGCACTGCAAAGGGAAGTTTGAAGGACCACCTGAATGGTAATACCTGTACGACTTTTTGCATGTTGGAGTCATATATGATATCTCTCTGTTAAGATTTCTGAAATTCAAACATAACAGATCCCCTAAGGACTCCTCTAAGCTGGAAGACCAGAGTACAGCTAGCCATCGGTGTAGCTGCTGCGCTGGTGAGTTAGGTGAACTCAGAATTATGCTTTCAGTACACAAACTTGTTGAGCTTTTTTAGCCTATAACAATTTCCCAATACTTACACTATTAGGATTGTCAGTACCTAAAGGTTATATCAATCTTGCACATTACAGGAGTATCTACAATTCTTCTGTGAGCCACCAGTAAATCACATCTCTATCAATTCGAGCAACATTATCTTGGATGAGAAGTTGATTCCTAAGGTGAAAATGCTGAAAATTATTGCTTTGATCAGAGTGCGTACTTAGACTATCTCAAACATGATTCATTTTCTTGTAACAGCTTTCAAATATTGGCTGTCTCTGCTCAGAAGGTGAGAATTCCTGCTGTACCCGAAAGGAAATGTTCTATGGTGAATTATCCTCTTGATAACATTATGTCAATTTTATTGTCTTGTTCGGCAGATGTAATACCTCAATTTGGTGCATTACTACTTGAGCTGATAACTGGTGAATCTTCACCAAAAGAGAGCGCTGATGTACTTCAGTGGATATGTGAACTGCAGTCAAACTTATCCATGCATAATATAATTGATCCAGACCTCGGAAATAGTTACAGTTTCAAAGAGTTAAGGGACCTTCTAAGTGTAGCAAGGTTGTGCATAAAAGTCGACAACACACAGGCCTTCACTATTTCACACATCTGTTGGTATCTTCAAAACAAGTTTGGTAATGCTAGTTACTAG ATGACAATAATGCCGAAAACTCAAGCTTCTTTCAGTTCTAGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAATTTTTGCAAATTCCTTGCCTTGATTCACCACGGTCATTCTGGTCAAGTAAATTTACTGAAGCGCGTCTCATACAAGGAGTTAGATAAGGCGACAGATGGTTTCCGAAGAATCATTACTTGTGACTCTCAAAGCATAACCTATGAAGCTAAATTTCAAGATGGTTCTGTTTCTGTTGTGAAAGAAGTAAAAAGTGTTGGTCAAGGAAATGAGGTATTCCACAAGGAATTGCATCTTCTAGGACGTTTGCATCACCGACATGTTGTAGCACTTAGAGGTTATGCTGTTGGTCGTAGAAGTTTCCTGGTTTTCGAGTGCACTGCAAAGGGAAGTTTGAAGGACCACCTGAATGATCCCCTAAGGACTCCTCTAAGCTGGAAGACCAGAGTACAGCTAGCCATCGGTGTAGCTGCTGCGCTGGAGTATCTACAATTCTTCTGTGAGCCACCAGTAAATCACATCTCTATCAATTCGAGCAACATTATCTTGGATGAGAAGTTGATTCCTAAGCTTTCAAATATTGGCTGTCTCTGCTCAGAAGATGTAATACCTCAATTTGGTGCATTACTACTTGAGCTGATAACTGGTGAATCTTCACCAAAAGAGAGCGCTGATGTACTTCAGTGGATATGTGAACTGCAGTCAAACTTATCCATGCATAATATAATTGATCCAGACCTCGGAAATAGTTACAGTTTCAAAGAGTTAAGGGACCTTCTAAGTGTAGCAAGGTTGTGCATAAAAGTCGACAACACACAGGCCTTCACTATTTCACACATCTGTTGGTATCTTCAAAACAAGTTTGGTAATGCTAGTTACTAG ATGACAATAATGCCGAAAACTCAAGCTTCTTTCAGTTCTAGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAATTTTTGCAAATTCCTTGCCTTGATTCACCACGGTCATTCTGGTCAAGTAAATTTACTGAAGCGCGTCTCATACAAGGAGTTAGATAAGGCGACAGATGGTTTCCGAAGAATCATTACTTGTGACTCTCAAAGCATAACCTATGAAGCTAAATTTCAAGATGGTTCTGTTTCTGTTGTGAAAGAAGTAAAAAGTGTTGGTCAAGGAAATGAGGTATTCCACAAGGAATTGCATCTTCTAGGACGTTTGCATCACCGACATGTTGTAGCACTTAGAGGTTATGCTGTTGGTCGTAGAAGTTTCCTGGTTTTCGAGTGCACTGCAAAGGGAAGTTTGAAGGACCACCTGAATGATCCCCTAAGGACTCCTCTAAGCTGGAAGACCAGAGTACAGCTAGCCATCGGTGTAGCTGCTGCGCTGGAGTATCTACAATTCTTCTGTGAGCCACCAGTAAATCACATCTCTATCAATTCGAGCAACATTATCTTGGATGAGAAGTTGATTCCTAAGCTTTCAAATATTGGCTGTCTCTGCTCAGAAGATGTAATACCTCAATTTGGTGCATTACTACTTGAGCTGATAACTGGTGAATCTTCACCAAAAGAGAGCGCTGATGTACTTCAGTGGATATGTGAACTGCAGTCAAACTTATCCATGCATAATATAATTGATCCAGACCTCGGAAATAGTTACAGTTTCAAAGAGTTAAGGGACCTTCTAAGTGTAGCAAGGTTGTGCATAAAAGTCGACAACACACAGGCCTTCACTATTTCACACATCTGTTGGTATCTTCAAAACAAGTTTGGTAATGCTAGTTACTAG MTIMPKTQASFSSRRRRRRRRSSNFCKFLALIHHGHSGQVNLLKRVSYKELDKATDGFRRIITCDSQSITYEAKFQDGSVSVVKEVKSVGQGNEVFHKELHLLGRLHHRHVVALRGYAVGRRSFLVFECTAKGSLKDHLNDPLRTPLSWKTRVQLAIGVAAALEYLQFFCEPPVNHISINSSNIILDEKLIPKLSNIGCLCSEDVIPQFGALLLELITGESSPKESADVLQWICELQSNLSMHNIIDPDLGNSYSFKELRDLLSVARLCIKVDNTQAFTISHICWYLQNKFGNASY Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Spo03012.1 vs. NCBI nr
Match: gi|902218473|gb|KNA18034.1| (hypothetical protein SOVF_074490 [Spinacia oleracea]) HSP 1 Score: 587.0 bits (1512), Expect = 1.800e-164 Identity = 294/299 (98.33%), Postives = 294/299 (98.33%), Query Frame = 1
BLAST of Spo03012.1 vs. NCBI nr
Match: gi|731348389|ref|XP_010685461.1| (PREDICTED: probable receptor-like protein kinase At1g49730 isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 444.9 bits (1143), Expect = 1.100e-121 Identity = 224/293 (76.45%), Postives = 253/293 (86.35%), Query Frame = 1
BLAST of Spo03012.1 vs. NCBI nr
Match: gi|731348391|ref|XP_010685462.1| (PREDICTED: probable receptor-like protein kinase At1g49730 isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 380.9 bits (977), Expect = 2.000e-102 Identity = 202/293 (68.94%), Postives = 226/293 (77.13%), Query Frame = 1
BLAST of Spo03012.1 vs. NCBI nr
Match: gi|225464820|ref|XP_002270105.1| (PREDICTED: probable receptor-like protein kinase At1g49730 [Vitis vinifera]) HSP 1 Score: 295.0 bits (754), Expect = 1.400e-76 Identity = 149/283 (52.65%), Postives = 196/283 (69.26%), Query Frame = 1
BLAST of Spo03012.1 vs. NCBI nr
Match: gi|1001910041|gb|AMM42975.1| (LRR-RLK [Vernicia montana]) HSP 1 Score: 291.6 bits (745), Expect = 1.600e-75 Identity = 146/283 (51.59%), Postives = 195/283 (68.90%), Query Frame = 1
BLAST of Spo03012.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RGD4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_074490 PE=4 SV=1) HSP 1 Score: 587.0 bits (1512), Expect = 1.300e-164 Identity = 294/299 (98.33%), Postives = 294/299 (98.33%), Query Frame = 1
BLAST of Spo03012.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BY82_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g171280 PE=4 SV=1) HSP 1 Score: 444.9 bits (1143), Expect = 7.700e-122 Identity = 224/293 (76.45%), Postives = 253/293 (86.35%), Query Frame = 1
BLAST of Spo03012.1 vs. UniProtKB/TrEMBL
Match: D7TCN6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g01260 PE=4 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 9.900e-77 Identity = 149/283 (52.65%), Postives = 196/283 (69.26%), Query Frame = 1
BLAST of Spo03012.1 vs. UniProtKB/TrEMBL
Match: A0A140G4K3_9ROSI (LRR-RLK OS=Vernicia montana PE=2 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 1.100e-75 Identity = 146/283 (51.59%), Postives = 195/283 (68.90%), Query Frame = 1
BLAST of Spo03012.1 vs. UniProtKB/TrEMBL
Match: A0A067L6U5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23910 PE=4 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 2.100e-74 Identity = 144/284 (50.70%), Postives = 195/284 (68.66%), Query Frame = 1
BLAST of Spo03012.1 vs. ExPASy Swiss-Prot
Match: Y1497_ARATH (Probable receptor-like protein kinase At1g49730 OS=Arabidopsis thaliana GN=At1g49730 PE=2 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 5.600e-33 Identity = 73/169 (43.20%), Postives = 108/169 (63.91%), Query Frame = 1
BLAST of Spo03012.1 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 3.000e-26 Identity = 75/240 (31.25%), Postives = 122/240 (50.83%), Query Frame = 1
BLAST of Spo03012.1 vs. ExPASy Swiss-Prot
Match: Y3707_ARATH (Serine/threonine-protein kinase At3g07070 OS=Arabidopsis thaliana GN=At3g07070 PE=2 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 3.900e-26 Identity = 87/274 (31.75%), Postives = 136/274 (49.64%), Query Frame = 1
BLAST of Spo03012.1 vs. ExPASy Swiss-Prot
Match: CRLK1_ARATH (Calcium/calmodulin-regulated receptor-like kinase 1 OS=Arabidopsis thaliana GN=CRLK1 PE=1 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 5.100e-26 Identity = 79/257 (30.74%), Postives = 124/257 (48.25%), Query Frame = 1
BLAST of Spo03012.1 vs. ExPASy Swiss-Prot
Match: PERK9_ARATH (Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.900e-25 Identity = 80/269 (29.74%), Postives = 128/269 (47.58%), Query Frame = 1
BLAST of Spo03012.1 vs. TAIR (Arabidopsis)
Match: AT5G22050.2 (Protein kinase superfamily protein) HSP 1 Score: 251.1 bits (640), Expect = 8.300e-67 Identity = 136/304 (44.74%), Postives = 195/304 (64.14%), Query Frame = 1
BLAST of Spo03012.1 vs. TAIR (Arabidopsis)
Match: AT3G19300.1 (Protein kinase superfamily protein) HSP 1 Score: 151.8 bits (382), Expect = 6.800e-37 Identity = 78/171 (45.61%), Postives = 115/171 (67.25%), Query Frame = 1
BLAST of Spo03012.1 vs. TAIR (Arabidopsis)
Match: AT1G49730.1 (Protein kinase superfamily protein) HSP 1 Score: 142.9 bits (359), Expect = 3.200e-34 Identity = 73/169 (43.20%), Postives = 108/169 (63.91%), Query Frame = 1
BLAST of Spo03012.1 vs. TAIR (Arabidopsis)
Match: AT3G13065.1 (STRUBBELIG-receptor family 4) HSP 1 Score: 120.6 bits (301), Expect = 1.700e-27 Identity = 75/240 (31.25%), Postives = 122/240 (50.83%), Query Frame = 1
BLAST of Spo03012.1 vs. TAIR (Arabidopsis)
Match: AT3G07070.1 (Protein kinase superfamily protein) HSP 1 Score: 120.2 bits (300), Expect = 2.200e-27 Identity = 87/274 (31.75%), Postives = 136/274 (49.64%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo03012.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo03012.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo03012.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo03012.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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