Spo03152.1 (mRNA) | SpinachBase

Overview


Name	Spo03152.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	TRICHOME BIREFRINGENCE-LIKE 8
Location	SpoScf_00629 : 44707 .. 45072 (-)
Sequence length	366

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCAAAATTTACAAGATTGTGAATATTTCAGGAATGGAACATGGGATACAGGAGGTACTTGTAGAGATAGGCAGGCACCTGAGACAAGCAAAAAGAAGCTGCAGGAAGACCCGCCGTTCAACCAATATATACTAGACGTTGTCAACGAAATGGAAGCTGACAAGATGAAGGTCAATTTTTCAAACATTACATATCTGTCTGAGTTAAGAGCGGATGGCCACCCATCAATCCATCGTGAGCCACTTTCTCAACAACACTCTATAGAAGACTGCAGCCATTGGTGTCTTCCAGGAGTTCCAGACATATGGAATGAACTTCTTTACTCTGAATTACTGGCTAAAGATTTTAGAATTAAGAGATAA

mRNA sequence

ATGTTTCAAAATTTACAAGATTGTGAATATTTCAGGAATGGAACATGGGATACAGGAGGTACTTGTAGAGATAGGCAGGCACCTGAGACAAGCAAAAAGAAGCTGCAGGAAGACCCGCCGTTCAACCAATATATACTAGACGTTGTCAACGAAATGGAAGCTGACAAGATGAAGGTCAATTTTTCAAACATTACATATCTGTCTGAGTTAAGAGCGGATGGCCACCCATCAATCCATCGTGAGCCACTTTCTCAACAACACTCTATAGAAGACTGCAGCCATTGGTGTCTTCCAGGAGTTCCAGACATATGGAATGAACTTCTTTACTCTGAATTACTGGCTAAAGATTTTAGAATTAAGAGATAA

Coding sequence (CDS)

ATGTTTCAAAATTTACAAGATTGTGAATATTTCAGGAATGGAACATGGGATACAGGAGGTACTTGTAGAGATAGGCAGGCACCTGAGACAAGCAAAAAGAAGCTGCAGGAAGACCCGCCGTTCAACCAATATATACTAGACGTTGTCAACGAAATGGAAGCTGACAAGATGAAGGTCAATTTTTCAAACATTACATATCTGTCTGAGTTAAGAGCGGATGGCCACCCATCAATCCATCGTGAGCCACTTTCTCAACAACACTCTATAGAAGACTGCAGCCATTGGTGTCTTCCAGGAGTTCCAGACATATGGAATGAACTTCTTTACTCTGAATTACTGGCTAAAGATTTTAGAATTAAGAGATAA

Protein sequence

MFQNLQDCEYFRNGTWDTGGTCRDRQAPETSKKKLQEDPPFNQYILDVVNEMEADKMKVNFSNITYLSELRADGHPSIHREPLSQQHSIEDCSHWCLPGVPDIWNELLYSELLAKDFRIKR

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo03152	Spo03152	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo03152.1	Spo03152.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03152.1.CDS.1	Spo03152.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03152.1.exon.1	Spo03152.1.exon.1	exon

Homology

[Close]

BLAST of Spo03152.1 vs. NCBI nr
Match: gi|922401593|ref|XP_013467933.1| (Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein [Medicago truncatula])

HSP 1 Score: 142.1 bits (357), Expect = 6.300e-31
Identity = 62/106 (58.49%), Postives = 78/106 (73.58%), Query Frame = 1

		  
Query: 10  YFRNGTWDTGGTCRDRQAPETSKKKLQEDPPFNQYILDVVNEMEADKMKVNFSNITYLSE 69
           ++RNGTW+ GG C   + PE    KL+ DP +N +I DVV EM+    KVNF NITYLSE
Sbjct: 292 HYRNGTWNEGGNCDKDKEPENDPAKLEADPYYNVFISDVVKEMQYGSWKVNFLNITYLSE 351

Query: 70  LRADGHPSIHREPLSQQHSIEDCSHWCLPGVPDIWNELLYSELLAK 116
           LR DGHPS +REP +   + +DCSHWCLPGVPD WNEL+Y++LL+K
Sbjct: 352 LRKDGHPSKYREPGTPPDAPQDCSHWCLPGVPDTWNELIYAQLLSK 397

[Close]

BLAST of Spo03152.1 vs. NCBI nr
Match: gi|727412757|ref|XP_010496932.1| (PREDICTED: protein trichome birefringence-like 8 [Camelina sativa])

HSP 1 Score: 141.4 bits (355), Expect = 1.100e-30
Identity = 60/111 (54.05%), Postives = 78/111 (70.27%), Query Frame = 1

		  
Query: 10  YFRNGTWDTGGTCRDRQAPETSKKKLQEDPPFNQYILDVVNEMEADKMKVNFSNITYLSE 69
           ++RNGTW+ GG C     PET  KK++ DP  N YI  V+ EM  +  KV F NITYL+E
Sbjct: 317 HYRNGTWNLGGLCDAETEPETDMKKMESDPIHNNYISQVIQEMRYEHSKVKFLNITYLTE 376

Query: 70  LRADGHPSIHREPLSQQHSIEDCSHWCLPGVPDIWNELLYSELLAKDFRIK 121
            R D HPS +REP + + + +DCSHWCLPGVPD WNE+LY++LLA ++R K
Sbjct: 377 FRKDAHPSRYREPGTPEDAPQDCSHWCLPGVPDTWNEILYAQLLAMNYRTK 427

[Close]

BLAST of Spo03152.1 vs. NCBI nr
Match: gi|1012362698|gb|KYP73881.1| (hypothetical protein KK1_006539 [Cajanus cajan])

HSP 1 Score: 141.0 bits (354), Expect = 1.400e-30
Identity = 61/120 (50.83%), Postives = 82/120 (68.33%), Query Frame = 1

		  
Query: 2   FQNLQDCEYFRNGTWDTGGTCRDRQAPETSKKKLQEDPPFNQYILDVVNEMEADKMKVNF 61
           F++     + +NGTWD GG C   + PE    KL+ +P +N +I DVV EM+    K +F
Sbjct: 277 FRSYSSVHFRQNGTWDDGGHCHKEKQPENDPTKLETEPYYNIFISDVVKEMQYGNRKAHF 336

Query: 62  SNITYLSELRADGHPSIHREPLSQQHSIEDCSHWCLPGVPDIWNELLYSELLAKDFRIKR 121
            NITYLSE R DGHPS +REP +  ++ +DCSHWCLPGVPD WNELLY++LL++ F I +
Sbjct: 337 LNITYLSEFRIDGHPSKYREPGTPPNAPQDCSHWCLPGVPDTWNELLYAQLLSEKFDINK 396

[Close]

BLAST of Spo03152.1 vs. NCBI nr
Match: gi|657989756|ref|XP_008387093.1| (PREDICTED: protein trichome birefringence-like 8 [Malus domestica])

HSP 1 Score: 139.4 bits (350), Expect = 4.100e-30
Identity = 62/111 (55.86%), Postives = 77/111 (69.37%), Query Frame = 1

		  
Query: 10  YFRNGTWDTGGTCRDRQAPETSKKKLQEDPPFNQYILDVVNEMEADKMKVNFSNITYLSE 69
           ++RNGTW+ GG C     PET  K L  DP  N YI + + ++E +K KV F NITYL+E
Sbjct: 312 HYRNGTWNEGGGCDTYSEPETDYKNLAVDPVNNLYISESIKQLEYEKWKVQFLNITYLTE 371

Query: 70  LRADGHPSIHREPLSQQHSIEDCSHWCLPGVPDIWNELLYSELLAKDFRIK 121
            R DGHPS +REP +   + +DCSHWCLPGVPD WNEL+Y+ LLAK FR K
Sbjct: 372 FRKDGHPSKYREPGTPXDAPQDCSHWCLPGVPDTWNELIYATLLAKGFRTK 422

[Close]

BLAST of Spo03152.1 vs. NCBI nr
Match: gi|727631609|ref|XP_010486818.1| (PREDICTED: protein trichome birefringence-like 8 [Camelina sativa])

HSP 1 Score: 139.4 bits (350), Expect = 4.100e-30
Identity = 60/111 (54.05%), Postives = 76/111 (68.47%), Query Frame = 1

		  
Query: 10  YFRNGTWDTGGTCRDRQAPETSKKKLQEDPPFNQYILDVVNEMEADKMKVNFSNITYLSE 69
           ++RNGTW+ GG C     PET  KK++ DP  N YI  V+ EM  +  KV F NITYL+E
Sbjct: 316 HYRNGTWNLGGLCDAETEPETDMKKMEPDPIHNNYISQVIQEMRYEHSKVKFLNITYLTE 375

Query: 70  LRADGHPSIHREPLSQQHSIEDCSHWCLPGVPDIWNELLYSELLAKDFRIK 121
            R D HPS  REP + + + +DCSHWCLPGVPD WNE+LY++LLA  +R K
Sbjct: 376 FRKDAHPSRFREPGTPEDAPQDCSHWCLPGVPDTWNEILYAQLLAMSYRTK 426

[Close]

BLAST of Spo03152.1 vs. UniProtKB/TrEMBL
Match: A0A072VV51_MEDTR (Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein OS=Medicago truncatula GN=MTR_1g058380 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 4.400e-31
Identity = 62/106 (58.49%), Postives = 78/106 (73.58%), Query Frame = 1

		  
Query: 10  YFRNGTWDTGGTCRDRQAPETSKKKLQEDPPFNQYILDVVNEMEADKMKVNFSNITYLSE 69
           ++RNGTW+ GG C   + PE    KL+ DP +N +I DVV EM+    KVNF NITYLSE
Sbjct: 292 HYRNGTWNEGGNCDKDKEPENDPAKLEADPYYNVFISDVVKEMQYGSWKVNFLNITYLSE 351

Query: 70  LRADGHPSIHREPLSQQHSIEDCSHWCLPGVPDIWNELLYSELLAK 116
           LR DGHPS +REP +   + +DCSHWCLPGVPD WNEL+Y++LL+K
Sbjct: 352 LRKDGHPSKYREPGTPPDAPQDCSHWCLPGVPDTWNELIYAQLLSK 397

[Close]

BLAST of Spo03152.1 vs. UniProtKB/TrEMBL
Match: A0A151U3M9_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_006539 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 9.700e-31
Identity = 61/120 (50.83%), Postives = 82/120 (68.33%), Query Frame = 1

		  
Query: 2   FQNLQDCEYFRNGTWDTGGTCRDRQAPETSKKKLQEDPPFNQYILDVVNEMEADKMKVNF 61
           F++     + +NGTWD GG C   + PE    KL+ +P +N +I DVV EM+    K +F
Sbjct: 277 FRSYSSVHFRQNGTWDDGGHCHKEKQPENDPTKLETEPYYNIFISDVVKEMQYGNRKAHF 336

Query: 62  SNITYLSELRADGHPSIHREPLSQQHSIEDCSHWCLPGVPDIWNELLYSELLAKDFRIKR 121
            NITYLSE R DGHPS +REP +  ++ +DCSHWCLPGVPD WNELLY++LL++ F I +
Sbjct: 337 LNITYLSEFRIDGHPSKYREPGTPPNAPQDCSHWCLPGVPDTWNELLYAQLLSEKFDINK 396

[Close]

BLAST of Spo03152.1 vs. UniProtKB/TrEMBL
Match: V4LL73_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10013662mg PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 6.300e-30
Identity = 58/111 (52.25%), Postives = 78/111 (70.27%), Query Frame = 1

		  
Query: 10  YFRNGTWDTGGTCRDRQAPETSKKKLQEDPPFNQYILDVVNEMEADKMKVNFSNITYLSE 69
           ++RNGTW+ GG C     PET K+K++ D   N+YI +V+ EM     KV F NITYL+E
Sbjct: 308 HYRNGTWNLGGLCDAEMEPETDKRKMEPDASHNRYIYEVIEEMSYQHSKVKFLNITYLTE 367

Query: 70  LRADGHPSIHREPLSQQHSIEDCSHWCLPGVPDIWNELLYSELLAKDFRIK 121
            R DGHPS +REP +   + +DCSHWCLPGVPD WNE+LY++LL+ ++  K
Sbjct: 368 FRKDGHPSRYREPGTPVDAPQDCSHWCLPGVPDTWNEILYAQLLSMNYTTK 418

[Close]

BLAST of Spo03152.1 vs. UniProtKB/TrEMBL
Match: V4UUM4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013764mg PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 8.200e-30
Identity = 59/111 (53.15%), Postives = 78/111 (70.27%), Query Frame = 1

		  
Query: 10  YFRNGTWDTGGTCRDRQAPETSKKKLQEDPPFNQYILDVVNEMEADKMKVNFSNITYLSE 69
           +FRNGTW+ GG C   + PET+  +L+++P  NQ I  V+ +M+ +  KV F NITYL+E
Sbjct: 266 HFRNGTWNKGGLCDKEREPETNYSRLEDEPANNQLISKVIKQMKNESRKVQFLNITYLTE 325

Query: 70  LRADGHPSIHREPLSQQHSIEDCSHWCLPGVPDIWNELLYSELLAKDFRIK 121
            R D HPS+HREP +   + +DCSHWCLPGVPD WNELLY+ LL   F+ K
Sbjct: 326 FRKDSHPSLHREPGTAADAPQDCSHWCLPGVPDTWNELLYAYLLNMGFKTK 376

[Close]

BLAST of Spo03152.1 vs. UniProtKB/TrEMBL
Match: A0A0R0HQJ3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G076000 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.100e-29
Identity = 60/112 (53.57%), Postives = 80/112 (71.43%), Query Frame = 1

		  
Query: 10  YFRNGTWDTGGTCRDRQAPETSKKKLQEDPPFNQYILDVVNEMEADKMKVNFSNITYLSE 69
           +FRNGTW+ GG C     PE    KL+ +P +N ++  VV +M+ +  KV+F NITYLSE
Sbjct: 293 HFRNGTWNDGGECDMETEPENDPTKLEIEPYYNIFVSGVVKQMQHESRKVHFLNITYLSE 352

Query: 70  LRADGHPSIHREPLSQQHSIEDCSHWCLPGVPDIWNELLYSELLAKDFRIKR 122
           LR DGHPS +REP +   + +DCSHWCLPGVPD WNELLY++LL++ F I +
Sbjct: 353 LRKDGHPSKYREPGTPPDAPQDCSHWCLPGVPDTWNELLYAQLLSEKFGINK 404

[Close]

BLAST of Spo03152.1 vs. ExPASy Swiss-Prot
Match: TBL8_ARATH (Protein trichome birefringence-like 8 OS=Arabidopsis thaliana GN=TBL8 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 4.300e-32
Identity = 59/111 (53.15%), Postives = 77/111 (69.37%), Query Frame = 1

		  
Query: 10  YFRNGTWDTGGTCRDRQAPETSKKKLQEDPPFNQYILDVVNEMEADKMKVNFSNITYLSE 69
           ++RNGTW+ GG C     PET  KK++ DP  N YI   + EM  +  KV F NITYL+E
Sbjct: 317 HYRNGTWNLGGLCDADTEPETDMKKMEPDPIHNNYISQAIQEMRYEHSKVKFLNITYLTE 376

Query: 70  LRADGHPSIHREPLSQQHSIEDCSHWCLPGVPDIWNELLYSELLAKDFRIK 121
            R D HPS +REP + + + +DCSHWCLPGVPD WNE+LY++LLA ++R K
Sbjct: 377 FRKDAHPSRYREPGTPEDAPQDCSHWCLPGVPDTWNEILYAQLLAMNYRTK 427

[Close]

BLAST of Spo03152.1 vs. ExPASy Swiss-Prot
Match: TBL9_ARATH (Protein trichome birefringence-like 9 OS=Arabidopsis thaliana GN=TBL9 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.800e-30
Identity = 59/111 (53.15%), Postives = 76/111 (68.47%), Query Frame = 1

		  
Query: 10  YFRNGTWDTGGTCRDRQAPETSKKKLQEDPPFNQYILDVVNEMEADKMKVNFSNITYLSE 69
           ++RNGTW+TGG C     PET K+KL+ D   N+YI  V+ EM     KV F NITYL+E
Sbjct: 303 HYRNGTWNTGGLCDAEIEPETDKRKLEPDASHNEYIYKVIEEMRYRHSKVKFLNITYLTE 362

Query: 70  LRADGHPSIHREPLSQQHSIEDCSHWCLPGVPDIWNELLYSELLAKDFRIK 121
            R DGH S +RE  +     +DCSHWCLPGVPD WNE+LY++LL+ ++R K
Sbjct: 363 FRKDGHISRYREQGTSVDVPQDCSHWCLPGVPDTWNEILYAQLLSMNYRTK 413

[Close]

BLAST of Spo03152.1 vs. ExPASy Swiss-Prot
Match: TBR_ARATH (Protein trichome birefringence OS=Arabidopsis thaliana GN=TBR PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 6.100e-18
Identity = 46/112 (41.07%), Postives = 65/112 (58.04%), Query Frame = 1

		  
Query: 10  YFRNGTWDTGGTCRDRQAPETSKKKLQEDPPFNQYILDVVNEMEADKMKVNFSNITYLSE 69
           +F  G W++GG C     P  +   L   P   + +  V+  M   K  V + NIT L++
Sbjct: 489 HFSGGQWNSGGACDSETEPIKNDTYLTPYPSKMKVLEKVLRGM---KTPVTYLNITRLTD 548

Query: 70  LRADGHPSIHR-EPLSQQHS-----IEDCSHWCLPGVPDIWNELLYSELLAK 116
            R DGHPS++R + LS++        +DCSHWCLPGVPD WNE+LY+EL+ K
Sbjct: 549 YRKDGHPSVYRKQSLSEKEKKSPLLYQDCSHWCLPGVPDSWNEILYAELIVK 597

[Close]

BLAST of Spo03152.1 vs. ExPASy Swiss-Prot
Match: TBL4_ARATH (Protein trichome birefringence-like 4 OS=Arabidopsis thaliana GN=TBL4 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 7.900e-18
Identity = 44/110 (40.00%), Postives = 64/110 (58.18%), Query Frame = 1

		  
Query: 10  YFRNGTWDTGGTCRDRQAPETSKKKLQEDPPFNQYILDVVNEMEADKMKVNFSNITYLSE 69
           +FR G W++GG C     P  ++      P   + +  V++EM   K  V + NIT ++ 
Sbjct: 336 HFRKGAWNSGGQCDGETRPIQNETYTGVYPWMMKVVESVISEM---KTPVFYMNITKMTW 395

Query: 70  LRADGHPSIHREPLSQQHS------IEDCSHWCLPGVPDIWNELLYSELL 114
            R DGHPS++R+P   + +       +DCSHWCLPGVPD WN+LLY+ LL
Sbjct: 396 YRTDGHPSVYRQPADPRGTSPAAGMYQDCSHWCLPGVPDSWNQLLYATLL 442

[Close]

BLAST of Spo03152.1 vs. ExPASy Swiss-Prot
Match: TBL1_ARATH (Protein trichome birefringence-like 1 OS=Arabidopsis thaliana GN=TBL1 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.300e-17
Identity = 46/112 (41.07%), Postives = 63/112 (56.25%), Query Frame = 1

		  
Query: 10  YFRNGTWDTGGTCRDRQAPETSKKKLQEDPPFNQYILDVVNEMEADKMKVNFSNITYLSE 69
           +F  G W+ GG C D   P  ++  L    P+   +  +   +   K  V + NIT L++
Sbjct: 430 HFSGGQWNAGGACDDETEPIKNETYLT---PYMLKMEILERVLRGMKTPVTYLNITRLTD 489

Query: 70  LRADGHPSIHR-EPLSQQHS-----IEDCSHWCLPGVPDIWNELLYSELLAK 116
            R D HPSI+R + LS + S      +DCSHWCLPGVPD WNE+ Y+ELL K
Sbjct: 490 YRKDAHPSIYRKQKLSAEESKSPLLYQDCSHWCLPGVPDSWNEIFYAELLVK 538

[Close]

BLAST of Spo03152.1 vs. TAIR (Arabidopsis)
Match: AT3G11570.1 (TRICHOME BIREFRINGENCE-LIKE 8)

HSP 1 Score: 138.7 bits (348), Expect = 2.400e-33
Identity = 59/111 (53.15%), Postives = 77/111 (69.37%), Query Frame = 1

		  
Query: 10  YFRNGTWDTGGTCRDRQAPETSKKKLQEDPPFNQYILDVVNEMEADKMKVNFSNITYLSE 69
           ++RNGTW+ GG C     PET  KK++ DP  N YI   + EM  +  KV F NITYL+E
Sbjct: 317 HYRNGTWNLGGLCDADTEPETDMKKMEPDPIHNNYISQAIQEMRYEHSKVKFLNITYLTE 376

Query: 70  LRADGHPSIHREPLSQQHSIEDCSHWCLPGVPDIWNELLYSELLAKDFRIK 121
            R D HPS +REP + + + +DCSHWCLPGVPD WNE+LY++LLA ++R K
Sbjct: 377 FRKDAHPSRYREPGTPEDAPQDCSHWCLPGVPDTWNEILYAQLLAMNYRTK 427

[Close]

BLAST of Spo03152.1 vs. TAIR (Arabidopsis)
Match: AT5G06230.1 (TRICHOME BIREFRINGENCE-LIKE 9)

HSP 1 Score: 133.3 bits (334), Expect = 1.000e-31
Identity = 59/111 (53.15%), Postives = 76/111 (68.47%), Query Frame = 1

		  
Query: 10  YFRNGTWDTGGTCRDRQAPETSKKKLQEDPPFNQYILDVVNEMEADKMKVNFSNITYLSE 69
           ++RNGTW+TGG C     PET K+KL+ D   N+YI  V+ EM     KV F NITYL+E
Sbjct: 303 HYRNGTWNTGGLCDAEIEPETDKRKLEPDASHNEYIYKVIEEMRYRHSKVKFLNITYLTE 362

Query: 70  LRADGHPSIHREPLSQQHSIEDCSHWCLPGVPDIWNELLYSELLAKDFRIK 121
            R DGH S +RE  +     +DCSHWCLPGVPD WNE+LY++LL+ ++R K
Sbjct: 363 FRKDGHISRYREQGTSVDVPQDCSHWCLPGVPDTWNEILYAQLLSMNYRTK 413

[Close]

BLAST of Spo03152.1 vs. TAIR (Arabidopsis)
Match: AT5G06700.1 (Plant protein of unknown function (DUF828))

HSP 1 Score: 91.7 bits (226), Expect = 3.400e-19
Identity = 46/112 (41.07%), Postives = 65/112 (58.04%), Query Frame = 1

		  
Query: 10  YFRNGTWDTGGTCRDRQAPETSKKKLQEDPPFNQYILDVVNEMEADKMKVNFSNITYLSE 69
           +F  G W++GG C     P  +   L   P   + +  V+  M   K  V + NIT L++
Sbjct: 489 HFSGGQWNSGGACDSETEPIKNDTYLTPYPSKMKVLEKVLRGM---KTPVTYLNITRLTD 548

Query: 70  LRADGHPSIHR-EPLSQQHS-----IEDCSHWCLPGVPDIWNELLYSELLAK 116
            R DGHPS++R + LS++        +DCSHWCLPGVPD WNE+LY+EL+ K
Sbjct: 549 YRKDGHPSVYRKQSLSEKEKKSPLLYQDCSHWCLPGVPDSWNEILYAELIVK 597

[Close]

BLAST of Spo03152.1 vs. TAIR (Arabidopsis)
Match: AT5G49340.1 (TRICHOME BIREFRINGENCE-LIKE 4)

HSP 1 Score: 91.3 bits (225), Expect = 4.500e-19
Identity = 44/110 (40.00%), Postives = 64/110 (58.18%), Query Frame = 1

		  
Query: 10  YFRNGTWDTGGTCRDRQAPETSKKKLQEDPPFNQYILDVVNEMEADKMKVNFSNITYLSE 69
           +FR G W++GG C     P  ++      P   + +  V++EM   K  V + NIT ++ 
Sbjct: 336 HFRKGAWNSGGQCDGETRPIQNETYTGVYPWMMKVVESVISEM---KTPVFYMNITKMTW 395

Query: 70  LRADGHPSIHREPLSQQHS------IEDCSHWCLPGVPDIWNELLYSELL 114
            R DGHPS++R+P   + +       +DCSHWCLPGVPD WN+LLY+ LL
Sbjct: 396 YRTDGHPSVYRQPADPRGTSPAAGMYQDCSHWCLPGVPDSWNQLLYATLL 442

[Close]

BLAST of Spo03152.1 vs. TAIR (Arabidopsis)
Match: AT3G12060.1 (Plant protein of unknown function (DUF828))

HSP 1 Score: 89.7 bits (221), Expect = 1.300e-18
Identity = 46/112 (41.07%), Postives = 63/112 (56.25%), Query Frame = 1

		  
Query: 10  YFRNGTWDTGGTCRDRQAPETSKKKLQEDPPFNQYILDVVNEMEADKMKVNFSNITYLSE 69
           +F  G W+ GG C D   P  ++  L    P+   +  +   +   K  V + NIT L++
Sbjct: 430 HFSGGQWNAGGACDDETEPIKNETYLT---PYMLKMEILERVLRGMKTPVTYLNITRLTD 489

Query: 70  LRADGHPSIHR-EPLSQQHS-----IEDCSHWCLPGVPDIWNELLYSELLAK 116
            R D HPSI+R + LS + S      +DCSHWCLPGVPD WNE+ Y+ELL K
Sbjct: 490 YRKDAHPSIYRKQKLSAEESKSPLLYQDCSHWCLPGVPDSWNEIFYAELLVK 538

The following BLAST results are available for this feature:

BLAST of Spo03152.1 vs. NCBI nr
BLAST of Spo03152.1 vs. UniProtKB/TrEMBL
BLAST of Spo03152.1 vs. ExPASy Swiss-Prot
BLAST of Spo03152.1 vs. TAIR (Arabidopsis)

BLAST of Spo03152.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|922401593\|ref\|XP_013467933.1\|	6.3e-31	58.4	Pmr5/Cas1p GDSL/SGNH-like acyl...	[more]
gi\|727412757\|ref\|XP_010496932.1\|	1.1e-30	54.0	PREDICTED: protein trichome bi...	[more]
gi\|1012362698\|gb\|KYP73881.1\|	1.4e-30	50.8	hypothetical protein KK1_00653...	[more]
gi\|657989756\|ref\|XP_008387093.1\|	4.1e-30	55.8	PREDICTED: protein trichome bi...	[more]
gi\|727631609\|ref\|XP_010486818.1\|	4.1e-30	54.0	PREDICTED: protein trichome bi...	[more]

BLAST of Spo03152.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A072VV51_MEDTR	4.4e-31	58.4	Pmr5/Cas1p GDSL/SGNH-like acyl...	[more]
A0A151U3M9_CAJCA	9.7e-31	50.8	Uncharacterized protein OS=Caj...	[more]
V4LL73_EUTSA	6.3e-30	52.2	Uncharacterized protein OS=Eut...	[more]
V4UUM4_9ROSI	8.2e-30	53.1	Uncharacterized protein OS=Cit...	[more]
A0A0R0HQJ3_SOYBN	1.1e-29	53.5	Uncharacterized protein OS=Gly...	[more]

BLAST of Spo03152.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
TBL8_ARATH	4.3e-32	53.1	Protein trichome birefringence...	[more]
TBL9_ARATH	1.8e-30	53.1	Protein trichome birefringence...	[more]
TBR_ARATH	6.1e-18	41.0	Protein trichome birefringence...	[more]
TBL4_ARATH	7.9e-18	40.0	Protein trichome birefringence...	[more]
TBL1_ARATH	2.3e-17	41.0	Protein trichome birefringence...	[more]

BLAST of Spo03152.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
AT3G11570.1	2.4e-33	53.1	TRICHOME BIREFRINGENCE-LIKE 8	[more]
AT5G06230.1	1.0e-31	53.1	TRICHOME BIREFRINGENCE-LIKE 9	[more]
AT5G06700.1	3.4e-19	41.0	Plant protein of unknown funct...	[more]
AT5G49340.1	4.5e-19	40.0	TRICHOME BIREFRINGENCE-LIKE 4	[more]
AT3G12060.1	1.3e-18	41.0	Plant protein of unknown funct...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026057	PC-Esterase	PFAM	PF13839	PC-Esterase	coord: 8..110 score: 1.1

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast