Spo03199.1 (mRNA)

Overview
NameSpo03199.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionDeoxyhypusine synthase
Locationchr5 : 28933771 .. 28936466 (-)
Sequence length1399
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCCATTTCTCCTTTCTCTGCTCCCCTTTCTCATTTAGTTCATCTTCTCAAATATGAGAGAGGTGTTCTCCTCTTCGATCTCACCTTCTCTTTCACGCTATTGAATAAATTTCGATTTCGATTTCGATTTGATTTAAGATTTTCGATTTAATTTATAATTTTCGGTTTTTTGGGGTTTTGATGTTTCAGATGAGGTTACAATTCCGATCATATGATCCTATCCAACCTATCTCATTCGTTCTACTACAAAGGAATTTCAGGTATTTTCTTCTTATCTTCCCTCAATTTATGATTGTTAAGATTTTTTCTAGGTCTAAGTACTTTGGTTTATAATTTCTATGTCGGTAATATCCGGAGTAGTTGTTGTTGCAGTAGTGATGGTAAGGACAGTTGATTGGGTCAATAGTTTCTTTTAGCTGCCATTTATTGCATTTGAAGAAGGTCCCTTCGATTTCCCCCTCTTGTATCGTAGAAAGAAAGGCTGAGTTTCTAGAGAGGAGTAATACATTTTCTTTTTGTATTTTGCATATTAGAGAGCATTAATCTTCTTACTTGTAAGTTTGATTTATATGAATTTTTCTTTGGTTTTGAGTTTTAACTCTGGAAGGGAAAGGTGGGCCTTCCTTCAAATGGTTGAGCAGGAGGTTTTGATGTTCAAAAATTAGGAAATTGGGACAGTAGAAAGATAAGGGTCAAATGATTGATATTTGGGGTCAGTTATGCTTCAAGGACGATGGAATTCAGATATATCTTTTCTTATTGGCGGATTTCACCAGGTTTGCCCTAATTCTCATAACTTTGTTCAAATGTCTTGATCTTTGATCTTCAATTGCCTTTTTTTTTTTCCTGTTTTTGCACGTAGTTTATTCCCTTTGGCTATGTAGGAGATGAATTATCATGTAATTCCGAAACCAAGGGTTTTTCCATGTATTTCTTCAGGCACTACTCAATGTTTTTTATTTTAAAATTGGCTGTCGCATTGCGAATCCTAGAATTGGTTATCTGAGAAACTTTATCTAGCTTATAGTTTTAAATTTAATTGATTCAATTTTTTGTTTGTTTCTATGAATGTACAGGAAGTCTTGAAGTGAAAGGTCAATTGATGTTATCATGCTTCTGTTATGATATTATAGGTTTTGTTATCGTCACTTTGTTTATATTTATATCAGTTTTCTGATATGGGGTCTGTTTTTGAGGTCTTGAAGTTTGAATATTGTTTACCATATCATAAAAACCACAAGATATGTCTGGGATTTCTAATCTGGACTTTATATAGTGATATCATATGAAATCTTGACCTTTCTATAGTCACATGCTTTGTAGTTTTCGATCAATAACAAAGGGCATATTATTATAGAGGAATTGTAGGTTTGGTATGCAAGATATGCGTGTTTGGTGGGGTTGTATATCGTTCATGTAAGAAGGTAATGAAGTTAGTGGTTTTTAGGCAATAGTTTATCTGATGAAAATATGATTGGTTGTCCTTCGTTATTGATCCAAAATTAGTGGTTTTTAGGCAGTAGGCAAGGTATTACGTTTATGGTTAACCAACTGGTGTAATCATGTATTCCCGTTTCAATTATTGTATTATGAATATGAATATAACTAAGAGATAGCTTGAGAGTTAGAGAAAAGAAGAGGTAATAGAAATAAAAGGATGGTTTTGAAATATTGTTTGACGTAGTAACTTGATTGTGAATGCGTTTATTTAGAACCTACGGGCTAAGGATCTGATGGTGTTGAACTTTGGTTAAAGGAAATATTAATGTCACTTGAGTGTCCCTTTACGTATTTTTGAATATGCAGTTGTAGTGAGAATCATTTATTATATAATTGTACTCGCTTTTGTGGTGGTAGATTTGAATTAGGTGTAGAAATATGGGTGATAGTGATATTTTGGCGTCGGTTCGCTCTGTGGTGTTCAAGGAGTCAGAAACCCTAGAAGGGAAATGCATTAAGACTGAGAGTTATGATTTTAATCAAGGAGTTAACTATCCCCAGCTTTTTAAATCGTTTGTCTCCACCGGTTTCCAAGCATCGAATCTCGGAGAAGCTATTGATGTTGTTAATGAAATGGTTAGCTAGAGTTTTTGTGTGAAATACAGTTTTACGTGTCGCTTGTTTTTGTATTGTGTTCATTTTGGGTGTTCGTGGTTAAATGCTAGATTGACGACTGGAAAATGAGATAGCAACTGAAGATTGCAGCGAGGAAGAGAGGGATCCTGGTTTTAGGGAGTCTGTGAGGTGTAAAATATTCTTAGGTTTTACGTCCAATCTTATCTCTTCCGGTGCCGTGACACTGTATGATATCTTGTTCAGCATCATATGGTGAGATAAGCTTCAAAGTTTTTCTAATATGCTTTGTTTTTTCCCCCCTCTCATTTGAACATGATTTGGGACTAAGGTTTTGTTGTTGTTGTTGTGTTCTCATTTGAACATGAAAAGGATGTGGACTTAGCTGTTCCAGACTTCCAATTATATCTTTCAGTCGATTGACTGCTTAAAATTTTCTTCGGTACTCTTGTAGTCTTGTTTAGGGAATATATGTATAAGATTGAAGTAAAACAATAGAGTGGCAAATAACATGCGTGCACATAGATTGTACTTCTGTTGTTTGATTTTTTTTTGAGGGGGAACTTCTGTTGTTTGATAAGAAGGCATGAACACTAGTAGAAAAAACCCTTATTGCAGCGGG

mRNA sequence

CTTCCATTTCTCCTTTCTCTGCTCCCCTTTCTCATTTAGTTCATCTTCTCAAATATGAGAGAGATGAGGTTACAATTCCGATCATATGATCCTATCCAACCTATCTCATTCGTTCTACTACAAAGGAATTTCAGGTATTTTCTTCTTATCTTCCCTCAATTTATGATTGTTAAGATTTTTTCTAGGTCTAAGTACTTTGGTTTATAATTTCTATGTCGGTAATATCCGGAGTAGTTGTTGTTGCAGTAGTGATGGTAAGGACAGTTGATTGGGTCAATAGTTTCTTTTAGCTGCCATTTATTGCATTTGAAGAAGGTCCCTTCGATTTCCCCCTCTTGTATCGTAGAAAGAAAGGCTGAGTTTCTAGAGAGGAGTAATACATTTTCTTTTTGTATTTTGCATATTAGAGAGCATTAATCTTCTTACTTGTAAGTTTGATTTATATGAATTTTTCTTTGGTTTTGAGTTTTAACTCTGGAAGGGAAAGGTGGGCCTTCCTTCAAATGGTTGAGCAGGAGGTTTTGATGTTCAAAAATTAGGAAATTGGGACAGTAGAAAGATAAGGGTCAAATGATTGATATTTGGGGTCAGTTATGCTTCAAGGACGATGGAATTCAGATATATCTTTTCTTATTGGCGGATTTCACCAGATTTGAATTAGGTGTAGAAATATGGGTGATAGTGATATTTTGGCGTCGGTTCGCTCTGTGGTGTTCAAGGAGTCAGAAACCCTAGAAGGGAAATGCATTAAGACTGAGAGTTATGATTTTAATCAAGGAGTTAACTATCCCCAGCTTTTTAAATCGTTTGTCTCCACCGGTTTCCAAGCATCGAATCTCGGAGAAGCTATTGATGTTGTTAATGAAATGATTGACGACTGGAAAATGAGATAGCAACTGAAGATTGCAGCGAGGAAGAGAGGGATCCTGGTTTTAGGGAGTCTGTGAGGTGTAAAATATTCTTAGGTTTTACGTCCAATCTTATCTCTTCCGGTGCCGTGACACTGTATGATATCTTGTTCAGCATCATATGGTGAGATAAGCTTCAAAGTTTTTCTAATATGCTTTGTTTTTTCCCCCCTCTCATTTGAACATGATTTGGGACTAAGGTTTTGTTGTTGTTGTTGTGTTCTCATTTGAACATGAAAAGGATGTGGACTTAGCTGTTCCAGACTTCCAATTATATCTTTCAGTCGATTGACTGCTTAAAATTTTCTTCGGTACTCTTGTAGTCTTGTTTAGGGAATATATGTATAAGATTGAAGTAAAACAATAGAGTGGCAAATAACATGCGTGCACATAGATTGTACTTCTGTTGTTTGATTTTTTTTTGAGGGGGAACTTCTGTTGTTTGATAAGAAGGCATGAACACTAGTAGAAAAAACCCTTATTGCAGCGGG

Coding sequence (CDS)

ATGGGTGATAGTGATATTTTGGCGTCGGTTCGCTCTGTGGTGTTCAAGGAGTCAGAAACCCTAGAAGGGAAATGCATTAAGACTGAGAGTTATGATTTTAATCAAGGAGTTAACTATCCCCAGCTTTTTAAATCGTTTGTCTCCACCGGTTTCCAAGCATCGAATCTCGGAGAAGCTATTGATGTTGTTAATGAAATGATTGACGACTGGAAAATGAGATAG

Protein sequence

MGDSDILASVRSVVFKESETLEGKCIKTESYDFNQGVNYPQLFKSFVSTGFQASNLGEAIDVVNEMIDDWKMR
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo03199Spo03199gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo03199.1Spo03199.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo03199.1.utr5p.3Spo03199.1.utr5p.3five_prime_UTR
Spo03199.1.utr5p.2Spo03199.1.utr5p.2five_prime_UTR
Spo03199.1.utr5p.1Spo03199.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo03199.1.CDS.2Spo03199.1.CDS.2CDS
Spo03199.1.CDS.1Spo03199.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo03199.1.utr3p.1Spo03199.1.utr3p.1three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo03199.1.exon.4Spo03199.1.exon.4exon
Spo03199.1.exon.3Spo03199.1.exon.3exon
Spo03199.1.exon.2Spo03199.1.exon.2exon
Spo03199.1.exon.1Spo03199.1.exon.1exon


Homology
[Close]
BLAST of Spo03199.1 vs. NCBI nr
Match: gi|902151821|gb|KNA05563.1| (hypothetical protein SOVF_189120 [Spinacia oleracea])

HSP 1 Score: 141.7 bits (356), Expect = 4.900e-31
Identity = 71/73 (97.26%), Postives = 72/73 (98.63%), Query Frame = 1 

		  

Query: 1  MGDSDILASVRSVVFKESETLEGKCIKTESYDFNQGVNYPQLFKSFVSTGFQASNLGEAI 60
          MGDSDILASVRSVVFKESETLEGKCIKTESYDFNQGVNYPQLFKSFVSTGFQASNLGEA 
Sbjct: 1  MGDSDILASVRSVVFKESETLEGKCIKTESYDFNQGVNYPQLFKSFVSTGFQASNLGEA- 60

Query: 61 DVVNEMIDDWKMR 74
          +VVNEMIDDWKMR
Sbjct: 61 NVVNEMIDDWKMR 72
[Close]
BLAST of Spo03199.1 vs. NCBI nr
Match: gi|902163265|gb|KNA06806.1| (hypothetical protein SOVF_177570 [Spinacia oleracea])

HSP 1 Score: 125.9 bits (315), Expect = 2.800e-26
Identity = 61/72 (84.72%), Postives = 66/72 (91.67%), Query Frame = 1 

		  

Query: 1  MGDSDILASVRSVVFKESETLEGKCIKTESYDFNQGVNYPQLFKSFVSTGFQASNLGEAI 60
          MGD DI+ASVRSVVFKESETLEGKCIK E YDFNQGVNYPQLFKSF+STGFQASNLGEAI
Sbjct: 1  MGDDDIVASVRSVVFKESETLEGKCIKIEGYDFNQGVNYPQLFKSFISTGFQASNLGEAI 60

Query: 61 DVVNEMIDDWKM 73
            VNEM+ DW++
Sbjct: 61 IAVNEML-DWRL 71
[Close]
BLAST of Spo03199.1 vs. NCBI nr
Match: gi|731340236|ref|XP_010681287.1| (PREDICTED: deoxyhypusine synthase isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 108.6 bits (270), Expect = 4.600e-21
Identity = 51/70 (72.86%), Postives = 61/70 (87.14%), Query Frame = 1 

		  

Query: 3  DSDILASVRSVVFKESETLEGKCIKTESYDFNQGVNYPQLFKSFVSTGFQASNLGEAIDV 62
          + + +ASV S VFKESETLEGKCIK + YDFNQGVNY QL KSF+STGFQASNLGEAI+V
Sbjct: 2  EDNTMASVHSTVFKESETLEGKCIKIQGYDFNQGVNYSQLVKSFISTGFQASNLGEAIEV 61

Query: 63 VNEMIDDWKM 73
          VN+M+ DW++
Sbjct: 62 VNQML-DWRL 70
[Close]
BLAST of Spo03199.1 vs. NCBI nr
Match: gi|729420713|ref|XP_010558095.1| (PREDICTED: deoxyhypusine synthase [Tarenaya hassleriana])

HSP 1 Score: 106.3 bits (264), Expect = 2.300e-20
Identity = 48/70 (68.57%), Postives = 61/70 (87.14%), Query Frame = 1 

		  

Query: 3  DSDILASVRSVVFKESETLEGKCIKTESYDFNQGVNYPQLFKSFVSTGFQASNLGEAIDV 62
          +  +L+SV S VFKESE+LEGKC+K E YDFNQGVNYP+L +S ++TGFQASNLGEAIDV
Sbjct: 2  EDHVLSSVHSTVFKESESLEGKCVKIEGYDFNQGVNYPRLLRSMLTTGFQASNLGEAIDV 61

Query: 63 VNEMIDDWKM 73
          VN+M+ DW++
Sbjct: 62 VNQML-DWRL 70
[Close]
BLAST of Spo03199.1 vs. NCBI nr
Match: gi|659072457|ref|XP_008465669.1| (PREDICTED: deoxyhypusine synthase isoform X1 [Cucumis melo])

HSP 1 Score: 105.1 bits (261), Expect = 5.100e-20
Identity = 49/72 (68.06%), Postives = 61/72 (84.72%), Query Frame = 1 

		  

Query: 1  MGDSDILASVRSVVFKESETLEGKCIKTESYDFNQGVNYPQLFKSFVSTGFQASNLGEAI 60
          M D+D+LASVR+ VFKESE LEGK IK E YDFNQG+NY  L +S +STGFQASNLG+AI
Sbjct: 1  MDDNDVLASVRAAVFKESENLEGKSIKIEGYDFNQGLNYSSLIRSMISTGFQASNLGDAI 60

Query: 61 DVVNEMIDDWKM 73
          +VVN+M+ DW++
Sbjct: 61 EVVNQML-DWRL 71
[Close]
BLAST of Spo03199.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFU4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_189120 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 3.400e-31
Identity = 71/73 (97.26%), Postives = 72/73 (98.63%), Query Frame = 1 

		  

Query: 1  MGDSDILASVRSVVFKESETLEGKCIKTESYDFNQGVNYPQLFKSFVSTGFQASNLGEAI 60
          MGDSDILASVRSVVFKESETLEGKCIKTESYDFNQGVNYPQLFKSFVSTGFQASNLGEA 
Sbjct: 1  MGDSDILASVRSVVFKESETLEGKCIKTESYDFNQGVNYPQLFKSFVSTGFQASNLGEA- 60

Query: 61 DVVNEMIDDWKMR 74
          +VVNEMIDDWKMR
Sbjct: 61 NVVNEMIDDWKMR 72
[Close]
BLAST of Spo03199.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJS0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_177570 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.000e-26
Identity = 61/72 (84.72%), Postives = 66/72 (91.67%), Query Frame = 1 

		  

Query: 1  MGDSDILASVRSVVFKESETLEGKCIKTESYDFNQGVNYPQLFKSFVSTGFQASNLGEAI 60
          MGD DI+ASVRSVVFKESETLEGKCIK E YDFNQGVNYPQLFKSF+STGFQASNLGEAI
Sbjct: 1  MGDDDIVASVRSVVFKESETLEGKCIKIEGYDFNQGVNYPQLFKSFISTGFQASNLGEAI 60

Query: 61 DVVNEMIDDWKM 73
            VNEM+ DW++
Sbjct: 61 IAVNEML-DWRL 71
[Close]
BLAST of Spo03199.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EYZ4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g140210 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.200e-21
Identity = 51/70 (72.86%), Postives = 61/70 (87.14%), Query Frame = 1 

		  

Query: 3  DSDILASVRSVVFKESETLEGKCIKTESYDFNQGVNYPQLFKSFVSTGFQASNLGEAIDV 62
          + + +ASV S VFKESETLEGKCIK + YDFNQGVNY QL KSF+STGFQASNLGEAI+V
Sbjct: 2  EDNTMASVHSTVFKESETLEGKCIKIQGYDFNQGVNYSQLVKSFISTGFQASNLGEAIEV 61

Query: 63 VNEMIDDWKM 73
          VN+M+ DW++
Sbjct: 62 VNQML-DWRL 70
[Close]
BLAST of Spo03199.1 vs. UniProtKB/TrEMBL
Match: A0A078ECH4_BRANA (BnaC09g49490D protein OS=Brassica napus GN=BnaC09g49490D PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.700e-20
Identity = 49/72 (68.06%), Postives = 61/72 (84.72%), Query Frame = 1 

		  

Query: 1  MGDSDILASVRSVVFKESETLEGKCIKTESYDFNQGVNYPQLFKSFVSTGFQASNLGEAI 60
          M +  +L+SV S VFKESE+LEGKC K E YDFNQGVNYP+L +S ++TGFQASNLGEAI
Sbjct: 1  MEEDRVLSSVHSTVFKESESLEGKCDKIEGYDFNQGVNYPKLLRSMLTTGFQASNLGEAI 60

Query: 61 DVVNEMIDDWKM 73
          DVVN+M+ DW++
Sbjct: 61 DVVNQML-DWRL 71
[Close]
BLAST of Spo03199.1 vs. UniProtKB/TrEMBL
Match: A0A0D3EHH7_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.700e-20
Identity = 49/72 (68.06%), Postives = 61/72 (84.72%), Query Frame = 1 

		  

Query: 1  MGDSDILASVRSVVFKESETLEGKCIKTESYDFNQGVNYPQLFKSFVSTGFQASNLGEAI 60
          M +  +L+SV S VFKESE+LEGKC K E YDFNQGVNYP+L +S ++TGFQASNLGEAI
Sbjct: 1  MEEDRVLSSVHSTVFKESESLEGKCDKIEGYDFNQGVNYPKLLRSMLTTGFQASNLGEAI 60

Query: 61 DVVNEMIDDWKM 73
          DVVN+M+ DW++
Sbjct: 61 DVVNQML-DWRL 71
[Close]
BLAST of Spo03199.1 vs. ExPASy Swiss-Prot
Match: DHYS_ARATH (Deoxyhypusine synthase OS=Arabidopsis thaliana GN=DHS PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.600e-21
Identity = 48/72 (66.67%), Postives = 60/72 (83.33%), Query Frame = 1 

		  

Query: 1  MGDSDILASVRSVVFKESETLEGKCIKTESYDFNQGVNYPQLFKSFVSTGFQASNLGEAI 60
          M D  + +SV S VFKESE+LEGKC K E YDFNQGV+YP+L +S ++TGFQASNLGEAI
Sbjct: 1  MEDDRVFSSVHSTVFKESESLEGKCDKIEGYDFNQGVDYPKLMRSMLTTGFQASNLGEAI 60

Query: 61 DVVNEMIDDWKM 73
          DVVN+M+ DW++
Sbjct: 61 DVVNQML-DWRL 71
[Close]
BLAST of Spo03199.1 vs. ExPASy Swiss-Prot
Match: DHYS_BRANA (Deoxyhypusine synthase OS=Brassica napus GN=DHS PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 7.900e-21
Identity = 46/72 (63.89%), Postives = 60/72 (83.33%), Query Frame = 1 

		  

Query: 1  MGDSDILASVRSVVFKESETLEGKCIKTESYDFNQGVNYPQLFKSFVSTGFQASNLGEAI 60
          M +  +L+SV S VFKESE+LEGKC K E YDFNQGVNYP+L +S ++TGFQASNLG+ I
Sbjct: 1  MEEDRVLSSVHSTVFKESESLEGKCDKIEGYDFNQGVNYPKLLRSMLTTGFQASNLGDVI 60

Query: 61 DVVNEMIDDWKM 73
          DVVN+M+ +W++
Sbjct: 61 DVVNQML-EWRL 71
[Close]
BLAST of Spo03199.1 vs. ExPASy Swiss-Prot
Match: DHYS_SOLLC (Deoxyhypusine synthase OS=Solanum lycopersicum GN=DHS PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 3.000e-20
Identity = 47/67 (70.15%), Postives = 56/67 (83.58%), Query Frame = 1 

		  

Query: 6  ILASVRSVVFKESETLEGKCIKTESYDFNQGVNYPQLFKSFVSTGFQASNLGEAIDVVNE 65
          I+ SVRSVVFKESE LEG C K E YDFN+GVNY +L KS VSTGFQASNLG+AI +VN+
Sbjct: 9  IMDSVRSVVFKESENLEGSCTKIEGYDFNKGVNYAELIKSMVSTGFQASNLGDAIAIVNQ 68

Query: 66 MIDDWKM 73
          M+ DW++
Sbjct: 69 ML-DWRL 74
[Close]
BLAST of Spo03199.1 vs. ExPASy Swiss-Prot
Match: DHYS_TOBAC (Deoxyhypusine synthase OS=Nicotiana tabacum GN=DHS1 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.500e-19
Identity = 45/73 (61.64%), Postives = 60/73 (82.19%), Query Frame = 1 

		  

Query: 1  MGDS-DILASVRSVVFKESETLEGKCIKTESYDFNQGVNYPQLFKSFVSTGFQASNLGEA 60
          MG++ +++ SVRS+VFKESE LEG   K E YDFN+GVNY +LFKS  STGFQA+NLG+A
Sbjct: 1  MGEALNVMESVRSIVFKESENLEGSATKIEGYDFNKGVNYAELFKSMASTGFQAANLGDA 60

Query: 61 IDVVNEMIDDWKM 73
          I +VN+M+ DW++
Sbjct: 61 IQIVNQML-DWRL 72
[Close]
BLAST of Spo03199.1 vs. ExPASy Swiss-Prot
Match: DHYS_SENVE (Deoxyhypusine synthase OS=Senecio vernalis GN=DHS1 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 7.400e-19
Identity = 42/72 (58.33%), Postives = 57/72 (79.17%), Query Frame = 1 

		  

Query: 1  MGDSDILASVRSVVFKESETLEGKCIKTESYDFNQGVNYPQLFKSFVSTGFQASNLGEAI 60
          M  + ++ ++RSVVFKESE+LEG C K   YDFN G++Y Q+ KS VSTGFQASNLG+AI
Sbjct: 5  MKQASVMENLRSVVFKESESLEGTCAKIRGYDFNNGIDYSQILKSMVSTGFQASNLGDAI 64

Query: 61 DVVNEMIDDWKM 73
          + VN+M+ DW++
Sbjct: 65 ETVNQML-DWRL 75
[Close]
BLAST of Spo03199.1 vs. TAIR (Arabidopsis)
Match: AT5G05920.1 (deoxyhypusine synthase)

HSP 1 Score: 102.8 bits (255), Expect = 9.000e-23
Identity = 48/72 (66.67%), Postives = 60/72 (83.33%), Query Frame = 1 

		  

Query: 1  MGDSDILASVRSVVFKESETLEGKCIKTESYDFNQGVNYPQLFKSFVSTGFQASNLGEAI 60
          M D  + +SV S VFKESE+LEGKC K E YDFNQGV+YP+L +S ++TGFQASNLGEAI
Sbjct: 1  MEDDRVFSSVHSTVFKESESLEGKCDKIEGYDFNQGVDYPKLMRSMLTTGFQASNLGEAI 60

Query: 61 DVVNEMIDDWKM 73
          DVVN+M+ DW++
Sbjct: 61 DVVNQML-DWRL 71
The following BLAST results are available for this feature:
BLAST of Spo03199.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902151821|gb|KNA05563.1|4.9e-3197.2hypothetical protein SOVF_1891... [more]
gi|902163265|gb|KNA06806.1|2.8e-2684.7hypothetical protein SOVF_1775... [more]
gi|731340236|ref|XP_010681287.1|4.6e-2172.8PREDICTED: deoxyhypusine synth... [more]
gi|729420713|ref|XP_010558095.1|2.3e-2068.5PREDICTED: deoxyhypusine synth... [more]
gi|659072457|ref|XP_008465669.1|5.1e-2068.0PREDICTED: deoxyhypusine synth... [more]
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BLAST of Spo03199.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QFU4_SPIOL3.4e-3197.2Uncharacterized protein OS=Spi... [more]
A0A0K9QJS0_SPIOL2.0e-2684.7Uncharacterized protein OS=Spi... [more]
A0A0J8EYZ4_BETVU3.2e-2172.8Uncharacterized protein OS=Bet... [more]
A0A078ECH4_BRANA4.7e-2068.0BnaC09g49490D protein OS=Brass... [more]
A0A0D3EHH7_BRAOL4.7e-2068.0Uncharacterized protein OS=Bra... [more]
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BLAST of Spo03199.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
DHYS_ARATH1.6e-2166.6Deoxyhypusine synthase OS=Arab... [more]
DHYS_BRANA7.9e-2163.8Deoxyhypusine synthase OS=Bras... [more]
DHYS_SOLLC3.0e-2070.1Deoxyhypusine synthase OS=Sola... [more]
DHYS_TOBAC1.5e-1961.6Deoxyhypusine synthase OS=Nico... [more]
DHYS_SENVE7.4e-1958.3Deoxyhypusine synthase OS=Sene... [more]
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BLAST of Spo03199.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G05920.19.0e-2366.6deoxyhypusine synthase[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002773Deoxyhypusine synthaseGENE3D3.40.910.10coord: 29..69
score: 3.
IPR002773Deoxyhypusine synthasePANTHERPTHR11703DEOXYHYPUSINE SYNTHASEcoord: 1..68
score: 7.6

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008612 peptidyl-lysine modification to peptidyl-hypusine
biological_process GO:0009553 embryo sac development
biological_process GO:0050983 obsolete deoxyhypusine biosynthetic process from spermidine
cellular_component GO:0005634 nucleus
molecular_function GO:0034038 deoxyhypusine synthase activity