Spo03279.1 (mRNA) | SpinachBase

Overview


Name	Spo03279.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Thioesterase family protein
Location	SpoScf_01474 : 109349 .. 112231 (+)
Sequence length	799

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTCTAGGCAAAATTATTTTTAATAATATAAGAAGTCAAACCGTCATACCAACCTACGACAAATGCAAAACAAGTCCTAAGGCTCAGAGTATTATGGAGGGAGCAAAACAGGTTCTACAGTTGAGCGACGACGAGTTTGGGAGCGTTTCGCGACTCGTTGTTAAGCCGCACGAGCCCCAAATAGGACCTAGTTTCTACGAGGATTTTGCCCTCAGAGGCATCCAAGTTGACCGAGTCGAACCAGGTCTGATCTTCTGCACCTTCAAGGTCCCTCCTCGCCTCATTGTAAGATTCTTTCTAAACTCATTTCACTCCCTTTTCTTATTTTACGGAATTACAGTGATTTATTTGATTGCTTCCTGTATAATTTTTGACCTAATTATGCTTATGATTCTATCGTAATTTTGAGGCAGCTGTGAAATTAAATTATTGGAATTTATAATAATCAAAAGAAAGGGTGTCAATTTGTGCTTAAAATTAACCCAGAAATTATACTATTGGGAATTTTTATACTCCGTAATCAAATAGAAAGGTGTTTTTTTTTCCTATTGGTGTCGAAATGAGATGGGGAAATGATTTCTTAGCTCTATCCGTAATCCTTAAGCTTGAGTTTGTGGTTGTATTGGAACTCTGTTGAAATTTGCTTAGAATTTGGGGTTTGAATAAATGCTCAATTAGTGGTTTATGATTTTCTAGTGCATATATTGGTTAAGGAAATGTGGGTCTTTGTGTGACGCATACGGATGAAGTTGGGATACGTTTGGACCTCTTGTGATTTGCCCACAGCGGATTCTGATTTTGTGATGATACTGATATAGTGATATATTCTGATAGTGATATATGATGTCTAATCCTTTGGAGCCAAAGAAATATATTTTAAGTCCGTTACTGTTTTTGTTCAGCTATGATGGTGGTGGTATGTGTATATTTTGATGATCATGAGAGTGGTATGTACTACTTGAAACTTTGTAATACTTTGAATATTATCCAGAATGAAAGAGTTCTACAAGTGGCTGCTTCAGCTCAGGTTGAAGTATGAAATTAGAATATACCATCTCTATTTAAAAATACTCCATATTAGGCCACGTTTTAATTTTTGCTTTGACTTGTTAGTTGTTACTTGTAAGAATATATAACGATGCACTGATCTATAAGGTGAGACTTGAGAGTCATTATTTAATTGCGTAACAAAGTTTGTTAAAAGTAATTATTTTGAGACAAATGGAGTACATTTTTATAAAGCAATCATATTTTGAAGTAGAATGGTTCATTTTAAGTATGATGTTTTGAGGCTATAGGATGAGCATGAAGGCTGCGATTGGCTGCATCAGGCCATCTGCTAAGAATTAGTATACGAAGAATGCAGTATATATGTTTGATCGTGTGGATTAGGTATTCTTTGCTCTTTTCAGTACATGATACTATTGCTTGTTATAGGTTGTTGCACAGCAAAATGCAAAAAAATGAGAACCATATGGTCAAATATTTGTGGACATCTGTGATTACAATGACACAAAACCTTTTCTTTATGATCAATACAATGTCTAATTTGATACTCTGCTACCTAAGACATTGGAAATTTGTCAAATACAACCCCATAAACTTCCCTCTTTACGGGTTACAACTCAAACTTTTACTTTTGTTAATTACAACCTAAAACTTAATCCCACACTTTAAATTACAACTCAATCTCCGATTGGGAGGAAATTATAATTATGACATCACTTTCTGACATCGCTACCCAGAATCTGACATGGGTTTGTAAATTAAAGCGTGGGATTAAGTTTTGGGTTGTAATTAACAAAGATGAAAGTTGAGGTGGTAACGCGTAAAGGGACAAGCTTATGGGTTTGTATTTTGCAAATTTTCCTAAGATATTTGGTATCCATTTTCAAATGTAACTTTTAAGAGGTTAATTAGAGCCTTAAAGGGCACTTATTTTGCATGACATACACAGAATTAAGCTTATCTTGTAGTGGAGTTATGTTTTTTAATCTTTCATGTTCATGCTTAGATATCCTTTCTTGAGATGTATGACAAGTCAATTCTTATTCAGTTTATATAAACAACCTGTTGCAGGATCGAACAGGAAATCTGGCTGGTGGTGCAATCGCCAATCTCGTCGACATAGTTGGTAATGCACTGATTTACAGAATTGGACAGCCAATGAATGTGTCTGTTGACATGTCCATCTCATATTTGTCAAATGCAAAGCTTGATGTAAGTAACAAGCATTATTCTACAGTACATGATATGCATACTTCATTTGATAGTGACTTGTTGATGAATTTAAGAATGATTTTATGAACCTGAAAAGGATAGAGTGAGTTCTATAAGACCCTGAAATCAAGTTCTAGTCCACATTAGTAACCTGAAGCTTGTTTCTGAAGTTAGGATGTATATGTTCATTGAGTTCTCATTATTTAGGTGATTAGTCGCTATATCTTAACCAAGTATCTTTATCTTTTAAGTTATGTACTTTTAAACAACTTTGGTCTATATATTGGCAGGATGAATTGGAGGTTACGTCAAGACTACTAGGGAAAATTGGAGCTGTTTCTGGAACTTCTGTTGTCATCAAGAAGAAGGATTCTGGAGAAATTGTTGCTCAAGGACGACACTCATTGTTTAGCAGACTTAAGAGTAAAATCTGATACTAATACCATTTTTAATTTGCTCTTGCACTCGAGAGACTATTCTTTCGTTTATAGATGCGAACTTATAACTGCAGTTCTGTTACTGATATGTGTAAATAAGGAGTCACAAGCAGATCAAACATTTGGGAATCAAATAAATTCTGGATATTGTTTGTAGATGCTTTTGTTCAAGTGTTCCTTAAATACTGCGCGTTTTTCAATTTTATTTTTATTTTTATTTTTATA

mRNA sequence

CACTCTAGGCAAAATTATTTTTAATAATATAAGAAGTCAAACCGTCATACCAACCTACGACAAATGCAAAACAAGTCCTAAGGCTCAGAGTATTATGGAGGGAGCAAAACAGGTTCTACAGTTGAGCGACGACGAGTTTGGGAGCGTTTCGCGACTCGTTGTTAAGCCGCACGAGCCCCAAATAGGACCTAGTTTCTACGAGGATTTTGCCCTCAGAGGCATCCAAGTTGACCGAGTCGAACCAGGTCTGATCTTCTGCACCTTCAAGGTCCCTCCTCGCCTCATTGATCGAACAGGAAATCTGGCTGGTGGTGCAATCGCCAATCTCGTCGACATAGTTGGTAATGCACTGATTTACAGAATTGGACAGCCAATGAATGTGTCTGTTGACATGTCCATCTCATATTTGTCAAATGCAAAGCTTGATGATGAATTGGAGGTTACGTCAAGACTACTAGGGAAAATTGGAGCTGTTTCTGGAACTTCTGTTGTCATCAAGAAGAAGGATTCTGGAGAAATTGTTGCTCAAGGACGACACTCATTGTTTAGCAGACTTAAGAGTAAAATCTGATACTAATACCATTTTTAATTTGCTCTTGCACTCGAGAGACTATTCTTTCGTTTATAGATGCGAACTTATAACTGCAGTTCTGTTACTGATATGTGTAAATAAGGAGTCACAAGCAGATCAAACATTTGGGAATCAAATAAATTCTGGATATTGTTTGTAGATGCTTTTGTTCAAGTGTTCCTTAAATACTGCGCGTTTTTCAATTTTATTTTTATTTTTATTTTTATA

Coding sequence (CDS)

ATGGAGGGAGCAAAACAGGTTCTACAGTTGAGCGACGACGAGTTTGGGAGCGTTTCGCGACTCGTTGTTAAGCCGCACGAGCCCCAAATAGGACCTAGTTTCTACGAGGATTTTGCCCTCAGAGGCATCCAAGTTGACCGAGTCGAACCAGGTCTGATCTTCTGCACCTTCAAGGTCCCTCCTCGCCTCATTGATCGAACAGGAAATCTGGCTGGTGGTGCAATCGCCAATCTCGTCGACATAGTTGGTAATGCACTGATTTACAGAATTGGACAGCCAATGAATGTGTCTGTTGACATGTCCATCTCATATTTGTCAAATGCAAAGCTTGATGATGAATTGGAGGTTACGTCAAGACTACTAGGGAAAATTGGAGCTGTTTCTGGAACTTCTGTTGTCATCAAGAAGAAGGATTCTGGAGAAATTGTTGCTCAAGGACGACACTCATTGTTTAGCAGACTTAAGAGTAAAATCTGA

Protein sequence

MEGAKQVLQLSDDEFGSVSRLVVKPHEPQIGPSFYEDFALRGIQVDRVEPGLIFCTFKVPPRLIDRTGNLAGGAIANLVDIVGNALIYRIGQPMNVSVDMSISYLSNAKLDDELEVTSRLLGKIGAVSGTSVVIKKKDSGEIVAQGRHSLFSRLKSKI

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo03279	Spo03279	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo03279.1	Spo03279.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03279.1.exon.1	Spo03279.1.exon.1	exon
Spo03279.1.exon.2	Spo03279.1.exon.2	exon
Spo03279.1.exon.3	Spo03279.1.exon.3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03279.1.utr5p.1	Spo03279.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03279.1.CDS.1	Spo03279.1.CDS.1	CDS
Spo03279.1.CDS.2	Spo03279.1.CDS.2	CDS
Spo03279.1.CDS.3	Spo03279.1.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03279.1.utr3p.1	Spo03279.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo03279.1 vs. NCBI nr
Match: gi|902238470|gb|KNA25205.1| (hypothetical protein SOVF_008570 [Spinacia oleracea])

HSP 1 Score: 309.3 bits (791), Expect = 3.900e-81
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1


		  
Query: 1   MEGAKQVLQLSDDEFGSVSRLVVKPHEPQIGPSFYEDFALRGIQVDRVEPGLIFCTFKVP 60
           MEGAKQVLQLSDDEFGSVSRLVVKPHEPQIGPSFYEDFALRGIQVDRVEPGLIFCTFKVP
Sbjct: 1   MEGAKQVLQLSDDEFGSVSRLVVKPHEPQIGPSFYEDFALRGIQVDRVEPGLIFCTFKVP 60

Query: 61  PRLIDRTGNLAGGAIANLVDIVGNALIYRIGQPMNVSVDMSISYLSNAKLDDELEVTSRL 120
           PRLIDRTGNLAGGAIANLVDIVGNALIYRIGQPMNVSVDMSISYLSNAKLDDELEVTSRL
Sbjct: 61  PRLIDRTGNLAGGAIANLVDIVGNALIYRIGQPMNVSVDMSISYLSNAKLDDELEVTSRL 120

Query: 121 LGKIGAVSGTSVVIKKKDSGEIVAQGRHSLFSRLKSKI 159
           LGKIGAVSGTSVVIKKKDSGEIVAQGRHSLFSRLKSKI
Sbjct: 121 LGKIGAVSGTSVVIKKKDSGEIVAQGRHSLFSRLKSKI 158

[Close]

BLAST of Spo03279.1 vs. NCBI nr
Match: gi|731348708|ref|XP_010685625.1| (PREDICTED: putative esterase C31F10.02 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 261.5 bits (667), Expect = 9.300e-67
Identity = 134/158 (84.81%), Postives = 143/158 (90.51%), Query Frame = 1


		  
Query: 1   MEGAKQVLQLSDDEFGSVSRLVVKPHEPQIGPSFYEDFALRGIQVDRVEPGLIFCTFKVP 60
           ME AK VL LS+DE  SVSRL V PHE Q+GPSFYEDFALRGI+VDRVEP  I CTFKVP
Sbjct: 1   MERAKHVLDLSEDESESVSRLSVNPHEFQVGPSFYEDFALRGIRVDRVEPEFISCTFKVP 60

Query: 61  PRLIDRTGNLAGGAIANLVDIVGNALIYRIGQPMNVSVDMSISYLSNAKLDDELEVTSRL 120
           PRL DRTGNLAGGAIANL+DIVGNALIYR+G+PMNVS+DMSISYLSNAKLDDELEVTSRL
Sbjct: 61  PRLTDRTGNLAGGAIANLIDIVGNALIYRVGRPMNVSIDMSISYLSNAKLDDELEVTSRL 120

Query: 121 LGKIGAVSGTSVVIKKKDSGEIVAQGRHSLFSRLKSKI 159
           LGKIGAVSGTSV+IKKK S EIVA+GRHSLFSR KSKI
Sbjct: 121 LGKIGAVSGTSVIIKKKASEEIVAEGRHSLFSRPKSKI 158

[Close]

BLAST of Spo03279.1 vs. NCBI nr
Match: gi|870853242|gb|KMT05123.1| (hypothetical protein BVRB_7g172740 isoform A [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 258.1 bits (658), Expect = 1.000e-65
Identity = 132/156 (84.62%), Postives = 141/156 (90.38%), Query Frame = 1


		  
Query: 1   MEGAKQVLQLSDDEFGSVSRLVVKPHEPQIGPSFYEDFALRGIQVDRVEPGLIFCTFKVP 60
           ME AK VL LS+DE  SVSRL V PHE Q+GPSFYEDFALRGI+VDRVEP  I CTFKVP
Sbjct: 1   MERAKHVLDLSEDESESVSRLSVNPHEFQVGPSFYEDFALRGIRVDRVEPEFISCTFKVP 60

Query: 61  PRLIDRTGNLAGGAIANLVDIVGNALIYRIGQPMNVSVDMSISYLSNAKLDDELEVTSRL 120
           PRL DRTGNLAGGAIANL+DIVGNALIYR+G+PMNVS+DMSISYLSNAKLDDELEVTSRL
Sbjct: 61  PRLTDRTGNLAGGAIANLIDIVGNALIYRVGRPMNVSIDMSISYLSNAKLDDELEVTSRL 120

Query: 121 LGKIGAVSGTSVVIKKKDSGEIVAQGRHSLFSRLKS 157
           LGKIGAVSGTSV+IKKK S EIVA+GRHSLFSR KS
Sbjct: 121 LGKIGAVSGTSVIIKKKASEEIVAEGRHSLFSRPKS 156

[Close]

BLAST of Spo03279.1 vs. NCBI nr
Match: gi|731347666|ref|XP_010685104.1| (PREDICTED: uncharacterized protein LOC104899586 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 226.1 bits (575), Expect = 4.300e-56
Identity = 110/158 (69.62%), Postives = 137/158 (86.71%), Query Frame = 1


		  
Query: 1   MEGAKQVLQLSDDEFGSVSRLVVKPHEPQIGPSFYEDFALRGIQVDRVEPGLIFCTFKVP 60
           ME AK VL+LS+ E  +VSR++V PHE  +  SFYE FA+RGI+VDRV+PGLI CTFKVP
Sbjct: 1   METAKHVLELSEKELENVSRVIVNPHECHVESSFYEIFAIRGIRVDRVQPGLISCTFKVP 60

Query: 61  PRLIDRTGNLAGGAIANLVDIVGNALIYRIGQPMNVSVDMSISYLSNAKLDDELEVTSRL 120
           PRL DRTGNLA GAIANL+D++G+ L Y +G+P+NV+VD+SI YLSNAKLDDELE+T+RL
Sbjct: 61  PRLTDRTGNLAVGAIANLIDMLGSVLAYEVGKPVNVTVDLSILYLSNAKLDDELELTARL 120

Query: 121 LGKIGAVSGTSVVIKKKDSGEIVAQGRHSLFSRLKSKI 159
           +GKIG VSGTS++I KK SGEIVA+GR+S+F+RLKSKI
Sbjct: 121 VGKIGVVSGTSIIITKKASGEIVAEGRNSMFTRLKSKI 158

[Close]

BLAST of Spo03279.1 vs. NCBI nr
Match: gi|731347668|ref|XP_010685105.1| (PREDICTED: uncharacterized protein LOC104899586 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 209.5 bits (532), Expect = 4.200e-51
Identity = 105/158 (66.46%), Postives = 132/158 (83.54%), Query Frame = 1


		  
Query: 1   MEGAKQVLQLSDDEFGSVSRLVVKPHEPQIGPSFYEDFALRGIQVDRVEPGLIFCTFKVP 60
           ME AK VL+LS+ E  +VSR++V PHE  +  SFYE FA+RGI+VDRV+PGLI CTFK  
Sbjct: 1   METAKHVLELSEKELENVSRVIVNPHECHVESSFYEIFAIRGIRVDRVQPGLISCTFK-- 60

Query: 61  PRLIDRTGNLAGGAIANLVDIVGNALIYRIGQPMNVSVDMSISYLSNAKLDDELEVTSRL 120
               DRTGNLA GAIANL+D++G+ L Y +G+P+NV+VD+SI YLSNAKLDDELE+T+RL
Sbjct: 61  ----DRTGNLAVGAIANLIDMLGSVLAYEVGKPVNVTVDLSILYLSNAKLDDELELTARL 120

Query: 121 LGKIGAVSGTSVVIKKKDSGEIVAQGRHSLFSRLKSKI 159
           +GKIG VSGTS++I KK SGEIVA+GR+S+F+RLKSKI
Sbjct: 121 VGKIGVVSGTSIIITKKASGEIVAEGRNSMFTRLKSKI 152

[Close]

BLAST of Spo03279.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S0C4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_008570 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 2.700e-81
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1


		  
Query: 1   MEGAKQVLQLSDDEFGSVSRLVVKPHEPQIGPSFYEDFALRGIQVDRVEPGLIFCTFKVP 60
           MEGAKQVLQLSDDEFGSVSRLVVKPHEPQIGPSFYEDFALRGIQVDRVEPGLIFCTFKVP
Sbjct: 1   MEGAKQVLQLSDDEFGSVSRLVVKPHEPQIGPSFYEDFALRGIQVDRVEPGLIFCTFKVP 60

Query: 61  PRLIDRTGNLAGGAIANLVDIVGNALIYRIGQPMNVSVDMSISYLSNAKLDDELEVTSRL 120
           PRLIDRTGNLAGGAIANLVDIVGNALIYRIGQPMNVSVDMSISYLSNAKLDDELEVTSRL
Sbjct: 61  PRLIDRTGNLAGGAIANLVDIVGNALIYRIGQPMNVSVDMSISYLSNAKLDDELEVTSRL 120

Query: 121 LGKIGAVSGTSVVIKKKDSGEIVAQGRHSLFSRLKSKI 159
           LGKIGAVSGTSVVIKKKDSGEIVAQGRHSLFSRLKSKI
Sbjct: 121 LGKIGAVSGTSVVIKKKDSGEIVAQGRHSLFSRLKSKI 158

[Close]

BLAST of Spo03279.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BYQ9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g172740 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 6.500e-67
Identity = 134/158 (84.81%), Postives = 143/158 (90.51%), Query Frame = 1


		  
Query: 1   MEGAKQVLQLSDDEFGSVSRLVVKPHEPQIGPSFYEDFALRGIQVDRVEPGLIFCTFKVP 60
           ME AK VL LS+DE  SVSRL V PHE Q+GPSFYEDFALRGI+VDRVEP  I CTFKVP
Sbjct: 1   MERAKHVLDLSEDESESVSRLSVNPHEFQVGPSFYEDFALRGIRVDRVEPEFISCTFKVP 60

Query: 61  PRLIDRTGNLAGGAIANLVDIVGNALIYRIGQPMNVSVDMSISYLSNAKLDDELEVTSRL 120
           PRL DRTGNLAGGAIANL+DIVGNALIYR+G+PMNVS+DMSISYLSNAKLDDELEVTSRL
Sbjct: 61  PRLTDRTGNLAGGAIANLIDIVGNALIYRVGRPMNVSIDMSISYLSNAKLDDELEVTSRL 120

Query: 121 LGKIGAVSGTSVVIKKKDSGEIVAQGRHSLFSRLKSKI 159
           LGKIGAVSGTSV+IKKK S EIVA+GRHSLFSR KSKI
Sbjct: 121 LGKIGAVSGTSVIIKKKASEEIVAEGRHSLFSRPKSKI 158

[Close]

BLAST of Spo03279.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BYU6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g172740 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 7.100e-66
Identity = 132/156 (84.62%), Postives = 141/156 (90.38%), Query Frame = 1


		  
Query: 1   MEGAKQVLQLSDDEFGSVSRLVVKPHEPQIGPSFYEDFALRGIQVDRVEPGLIFCTFKVP 60
           ME AK VL LS+DE  SVSRL V PHE Q+GPSFYEDFALRGI+VDRVEP  I CTFKVP
Sbjct: 1   MERAKHVLDLSEDESESVSRLSVNPHEFQVGPSFYEDFALRGIRVDRVEPEFISCTFKVP 60

Query: 61  PRLIDRTGNLAGGAIANLVDIVGNALIYRIGQPMNVSVDMSISYLSNAKLDDELEVTSRL 120
           PRL DRTGNLAGGAIANL+DIVGNALIYR+G+PMNVS+DMSISYLSNAKLDDELEVTSRL
Sbjct: 61  PRLTDRTGNLAGGAIANLIDIVGNALIYRVGRPMNVSIDMSISYLSNAKLDDELEVTSRL 120

Query: 121 LGKIGAVSGTSVVIKKKDSGEIVAQGRHSLFSRLKS 157
           LGKIGAVSGTSV+IKKK S EIVA+GRHSLFSR KS
Sbjct: 121 LGKIGAVSGTSVIIKKKASEEIVAEGRHSLFSRPKS 156

[Close]

BLAST of Spo03279.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BZW0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g168180 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 3.000e-56
Identity = 110/158 (69.62%), Postives = 137/158 (86.71%), Query Frame = 1


		  
Query: 1   MEGAKQVLQLSDDEFGSVSRLVVKPHEPQIGPSFYEDFALRGIQVDRVEPGLIFCTFKVP 60
           ME AK VL+LS+ E  +VSR++V PHE  +  SFYE FA+RGI+VDRV+PGLI CTFKVP
Sbjct: 1   METAKHVLELSEKELENVSRVIVNPHECHVESSFYEIFAIRGIRVDRVQPGLISCTFKVP 60

Query: 61  PRLIDRTGNLAGGAIANLVDIVGNALIYRIGQPMNVSVDMSISYLSNAKLDDELEVTSRL 120
           PRL DRTGNLA GAIANL+D++G+ L Y +G+P+NV+VD+SI YLSNAKLDDELE+T+RL
Sbjct: 61  PRLTDRTGNLAVGAIANLIDMLGSVLAYEVGKPVNVTVDLSILYLSNAKLDDELELTARL 120

Query: 121 LGKIGAVSGTSVVIKKKDSGEIVAQGRHSLFSRLKSKI 159
           +GKIG VSGTS++I KK SGEIVA+GR+S+F+RLKSKI
Sbjct: 121 VGKIGVVSGTSIIITKKASGEIVAEGRNSMFTRLKSKI 158

[Close]

BLAST of Spo03279.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BVF4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g168180 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.900e-51
Identity = 105/158 (66.46%), Postives = 132/158 (83.54%), Query Frame = 1


		  
Query: 1   MEGAKQVLQLSDDEFGSVSRLVVKPHEPQIGPSFYEDFALRGIQVDRVEPGLIFCTFKVP 60
           ME AK VL+LS+ E  +VSR++V PHE  +  SFYE FA+RGI+VDRV+PGLI CTFK  
Sbjct: 1   METAKHVLELSEKELENVSRVIVNPHECHVESSFYEIFAIRGIRVDRVQPGLISCTFK-- 60

Query: 61  PRLIDRTGNLAGGAIANLVDIVGNALIYRIGQPMNVSVDMSISYLSNAKLDDELEVTSRL 120
               DRTGNLA GAIANL+D++G+ L Y +G+P+NV+VD+SI YLSNAKLDDELE+T+RL
Sbjct: 61  ----DRTGNLAVGAIANLIDMLGSVLAYEVGKPVNVTVDLSILYLSNAKLDDELELTARL 120

Query: 121 LGKIGAVSGTSVVIKKKDSGEIVAQGRHSLFSRLKSKI 159
           +GKIG VSGTS++I KK SGEIVA+GR+S+F+RLKSKI
Sbjct: 121 VGKIGVVSGTSIIITKKASGEIVAEGRNSMFTRLKSKI 152

[Close]

BLAST of Spo03279.1 vs. ExPASy Swiss-Prot
Match: ACO13_HUMAN (Acyl-coenzyme A thioesterase 13 OS=Homo sapiens GN=ACOT13 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.600e-10
Identity = 38/101 (37.62%), Postives = 60/101 (59.41%), Query Frame = 1


		  
Query: 50  PGLIFCTFKVPPRLIDRTGNLAGGAIANLVDIVGN-ALIYRIGQPMNVSVDMSISYLSNA 109
           PG + C  KV     +  G L GG  A LVD +   AL+        VSVDM+I+Y+S A
Sbjct: 35  PGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPA 94

Query: 110 KLDDELEVTSRLLGKIGAVSGTSVVIKKKDSGEIVAQGRHS 150
           KL +++ +T+ +L +   ++ TSV +  K +G+++AQGRH+
Sbjct: 95  KLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHT 135

[Close]

BLAST of Spo03279.1 vs. ExPASy Swiss-Prot
Match: ACO13_PONAB (Acyl-coenzyme A thioesterase 13 OS=Pongo abelii GN=ACOT13 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.600e-10
Identity = 38/101 (37.62%), Postives = 60/101 (59.41%), Query Frame = 1


		  
Query: 50  PGLIFCTFKVPPRLIDRTGNLAGGAIANLVDIVGN-ALIYRIGQPMNVSVDMSISYLSNA 109
           PG + C  KV     +  G L GG  A LVD +   AL+        VSVDM+I+Y+S A
Sbjct: 35  PGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPA 94

Query: 110 KLDDELEVTSRLLGKIGAVSGTSVVIKKKDSGEIVAQGRHS 150
           KL +++ +T+ +L +   ++ TSV +  K +G+++AQGRH+
Sbjct: 95  KLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHT 135

[Close]

BLAST of Spo03279.1 vs. ExPASy Swiss-Prot
Match: ACO13_MOUSE (Acyl-coenzyme A thioesterase 13 OS=Mus musculus GN=Acot13 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.700e-10
Identity = 38/114 (33.33%), Postives = 64/114 (56.14%), Query Frame = 1


		  
Query: 37  DFALRGIQVDRVEPGLIFCTFKVPPRLIDRTGNLAGGAIANLVDIVGN-ALIYRIGQPMN 96
           D  L  + +    P  + C  KV  +  ++ G L GG  A LVD +   AL+        
Sbjct: 22  DRVLEKVTLVSAAPEKLICEMKVEEQHTNKLGTLHGGLTATLVDSISTMALMCTERGAPG 81

Query: 97  VSVDMSISYLSNAKLDDELEVTSRLLGKIGAVSGTSVVIKKKDSGEIVAQGRHS 150
           VSVDM+I+Y+S AK+ +E+ +T+ +L +   ++  SV +  K +G+++AQGRH+
Sbjct: 82  VSVDMNITYMSPAKIGEEIVITAHILKQGKTLAFASVDLTNKTTGKLIAQGRHT 135

[Close]

BLAST of Spo03279.1 vs. ExPASy Swiss-Prot
Match: YB22_SCHPO (Putative esterase C31F10.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC31F10.02 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.300e-6
Identity = 33/120 (27.50%), Postives = 60/120 (50.00%), Query Frame = 1


		  
Query: 35  YEDFALRGIQVDRVEPGLIFCTFKVPPRLIDRTGNLAGGAIANLVDIVGNALIYRIGQPM 94
           ++   +  IQ+    PG + C+ K+    ++R GNL GG IA L D+ G+  +   G  +
Sbjct: 27  FDAHVVSDIQIISAVPGFVECSLKLQKHHLNRMGNLHGGCIAALTDLGGSLALASRGLFI 86

Query: 95  N-VSVDMSISYLSNAKLDDELEVTSRLLGKIGAVSGTSVVIKKKDSGEIVAQGRHSLFSR 154
           + VS+DM+ ++L +        +      ++G+    + V     S E+ A+GRH+ F R
Sbjct: 87  SGVSIDMNQTFLQSGGTLGSSILLHAKCDRLGSNIAFTSVDFLTSSNEVFAKGRHTKFVR 146

[Close]

BLAST of Spo03279.1 vs. TAIR (Arabidopsis)
Match: AT2G29590.1 (Thioesterase superfamily protein)

HSP 1 Score: 169.5 bits (428), Expect = 1.700e-42
Identity = 93/160 (58.13%), Postives = 117/160 (73.12%), Query Frame = 1


		  
Query: 1   MEGAKQVLQLSDD--EFGSVSRLVVKPHEPQIGPSFYEDFALRGIQVDRVEPGLIFCTFK 60
           ME   + LQLSD+  + G   R+     E   G SFYE+F+LRGI+V+RVEPG I C+FK
Sbjct: 2   MEKIMEYLQLSDEVVDDGEAPRVEEFLGE---GKSFYENFSLRGIRVNRVEPGFISCSFK 61

Query: 61  VPPRLIDRTGNLAGGAIANLVDIVGNALIYRIGQPMNVSVDMSISYLSNAKLDDELEVTS 120
           VP RL DR  NLA GAIANLVD VG AL++  G PM+VSVDMSI++LS AKL +ELE+TS
Sbjct: 62  VPLRLTDRDKNLANGAIANLVDEVGGALVHGEGLPMSVSVDMSIAFLSKAKLGEELEITS 121

Query: 121 RLLGKIGAVSGTSVVIKKKDSGEIVAQGRHSLFSRLKSKI 159
           RLLG+ G   GT VV++ K +GEI+A+GRHS+F R  SK+
Sbjct: 122 RLLGERGGYKGTIVVVRNKMTGEIIAEGRHSMFGRQASKL 158

[Close]

BLAST of Spo03279.1 vs. TAIR (Arabidopsis)
Match: AT1G04290.1 (Thioesterase superfamily protein)

HSP 1 Score: 114.0 bits (284), Expect = 8.400e-26
Identity = 62/159 (38.99%), Postives = 96/159 (60.38%), Query Frame = 1


		  
Query: 1   MEGAKQVLQLSDDEFGSVSRLVVKPHEPQIGPSFYEDFALRGIQVDRVEPGLIFCTFKVP 60
           +E  K+ L+  +DE      +   PH       F E F   G++VD +EPG I C+ K+P
Sbjct: 3   LESVKKYLEGDEDEKAKEPMVAKLPHR------FLERFVTNGLKVDLIEPGRIVCSMKIP 62

Query: 61  PRLIDRTGNLAGGAIANLVDIVGNALIYRIG-QPMNVSVDMSISYLSNAKLDDELEVTSR 120
           P L++    L GGA A LVD++G+A+IY  G     VSV++++SYL  A LD+E+E+ S+
Sbjct: 63  PHLLNAGKFLHGGATATLVDLIGSAVIYTAGASHSGVSVEINVSYLDAAFLDEEIEIESK 122

Query: 121 LLGKIGAVSGTSVVIKKKDSGEIVAQGRHSLFSRLKSKI 159
            L    AV+  SV ++KK +G+I+AQGRH+ +   +S +
Sbjct: 123 ALRVGKAVAVVSVELRKKTTGKIIAQGRHTKYFAPRSNL 155

[Close]

BLAST of Spo03279.1 vs. TAIR (Arabidopsis)
Match: AT3G16175.1 (Thioesterase superfamily protein)

HSP 1 Score: 74.3 bits (181), Expect = 7.400e-14
Identity = 34/117 (29.06%), Postives = 68/117 (58.12%), Query Frame = 1


		  
Query: 31  GPSFYEDFALRGIQVDRVEPGLIFCTFKVPPRLIDRTGNLAGGAIANLVDIVGNALIYRI 90
           G + +E   L+G+++  V  G++ C   V   ++   G+   G I  ++D +G + +Y  
Sbjct: 21  GQTEFEILILKGLELIHVGKGILRCKLLVTDHVVGEDGSWNAGVITAVMDSIGASAVYSS 80

Query: 91  GQPMNVSVDMSISYLSNAKLDDELEVTSRLLGKIGAVSGTSVVIKKKDSGEIVAQGR 148
           G  +++SVD++ S+ S AK+ + +E+ +R+ G  G +    + I+++ SGEI+A GR
Sbjct: 81  GGGLHISVDLNSSFYSTAKIHETVEIEARVNGSNGGLKSAVIEIRRETSGEIIATGR 137

The following BLAST results are available for this feature:

BLAST of Spo03279.1 vs. NCBI nr
BLAST of Spo03279.1 vs. UniProtKB/TrEMBL
BLAST of Spo03279.1 vs. ExPASy Swiss-Prot
BLAST of Spo03279.1 vs. TAIR (Arabidopsis)

BLAST of Spo03279.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902238470\|gb\|KNA25205.1\|	3.9e-81	100.	hypothetical protein SOVF_0085...	[more]
gi\|731348708\|ref\|XP_010685625.1\|	9.3e-67	84.8	PREDICTED: putative esterase C...	[more]
gi\|870853242\|gb\|KMT05123.1\|	1.0e-65	84.6	hypothetical protein BVRB_7g17...	[more]
gi\|731347666\|ref\|XP_010685104.1\|	4.3e-56	69.6	PREDICTED: uncharacterized pro...	[more]
gi\|731347668\|ref\|XP_010685105.1\|	4.2e-51	66.4	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo03279.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9S0C4_SPIOL	2.7e-81	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BYQ9_BETVU	6.5e-67	84.8	Uncharacterized protein OS=Bet...	[more]
A0A0J8BYU6_BETVU	7.1e-66	84.6	Uncharacterized protein OS=Bet...	[more]
A0A0J8BZW0_BETVU	3.0e-56	69.6	Uncharacterized protein OS=Bet...	[more]
A0A0J8BVF4_BETVU	2.9e-51	66.4	Uncharacterized protein OS=Bet...	[more]

BLAST of Spo03279.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 4


Match Name	E-value	Identity	Description
ACO13_HUMAN	1.6e-10	37.6	Acyl-coenzyme A thioesterase 1...	[more]
ACO13_PONAB	1.6e-10	37.6	Acyl-coenzyme A thioesterase 1...	[more]
ACO13_MOUSE	2.7e-10	33.3	Acyl-coenzyme A thioesterase 1...	[more]
YB22_SCHPO	5.3e-6	27.5	Putative esterase C31F10.02 OS...	[more]

BLAST of Spo03279.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT2G29590.1	1.7e-42	58.1	Thioesterase superfamily prote...	[more]
AT1G04290.1	8.4e-26	38.9	Thioesterase superfamily prote...	[more]
AT3G16175.1	7.4e-14	29.0	Thioesterase superfamily prote...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006683	Thioesterase domain	PFAM	PF03061	4HBT	coord: 68..122 score: 2.
None	No IPR available	PANTHER	PTHR21660	THIOESTERASE SUPERFAMILY MEMBER-RELATED	coord: 25..158 score: 2.5
None	No IPR available	PANTHER	PTHR21660:SF8	SUBFAMILY NOT NAMED	coord: 25..158 score: 2.5

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005777	peroxisome