Spo03302.1 (mRNA) | SpinachBase

Overview


Name	Spo03302.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Putative thiol-disulphide oxidoreductase DCC
Location	SpoScf_00897 : 242725 .. 243943 (+)
Sequence length	353

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGGGTTTGCTAGGCTGCTAGCTCCGATACCATGACAAGTTTATTAGGGTTATGATTTTCCTTGAGTTTGTATTGCATTGGAATTGGTATTATATACTACAGCATTAGCTACGGGCTTTCCTAGACTTAGTATTACTAAATACAAGCTAAGCCTATTAAAGCCCAACTACAAAATACACAATATATATATATATATATATATATAAGCCTTAATATTTTCCCACTTGTTACCCCCACCATCACATGCTCACCAAAGTTTCTTAACTACCATGCAAATATTAAGCGTAAAGATCATTTAGGAACGGAGGTAGTATATGTTTGTATTACATGCTTATGTCTCTAACAAATGAAAAAGAATCTTTGCTTTGTGCATATGCTAATAGTATGATCATCTGATATTTACATGGTTTCGGGTAGAAAAAATCTGTAGATGTAAGATTGATTGTTTTCTATTGGGTATTATTGCAGGAAAATCAGATATGAAGCTCTACAAAGTGAAGCAGGAAAGAATTTGTTAAGGAGATCAGGAAGAGCTCCTGATGATATATCAAGTGTTGTCCTTGTTGAAAAAGAGAGGTACGAGTTTGTTTTGATAATATACGAGTTTCTTGGTTTATTGATCTAGAGTCGAACAAGAAAAAAAACTCACTGCTCCATGCTCTAGAGTCCGTTATCTTTTGGGAAGCAATCAGTGATTATTAGTGACATTTGTTTTTCTTTGGTACCCACTGATATGTAATACACATAATTCACAAATTTCTTGATTTTTCCTGTTTCCTACTGCATCTCATCAACTCACTGCACCACAGAAGACTGTGTGATCCTACTTAGTTGGATTTCCCTCTAAAACCAACTGTCTGTGCATGTTTCTGCAGATCTTACATCAAGTCTGAAGCTGTATTAAAGATCATGGAATACATAAATTTACCATTCCCACAGATGGCATTCTTCCTGAAACTTTTACCTTTGTGAGTAATTTAATATTTTGCTGTTTAAGAAATTATCCCATCTTTGCAGCTGGACAAGTCTCTAATTTGACCTTTTAACAATTTTTTCCTGTAACTACCACAGGCTCGTTCGTGATTTTGCATACGACAATTTAGCAAACAACCGTTACAACATTTTTGGTAAGTCAGAGTCGTGCGAGATTTATTTAGATCAGTGAATGTCATCAATTTCTTCCTTGAGAATTTCGTACATCTAATCCTGATACAT

mRNA sequence

ATGATAGGGAAAATCAGATATGAAGCTCTACAAAGTGAAGCAGGAAAGAATTTGTTAAGGAGATCAGGAAGAGCTCCTGATGATATATCAAGTGTTGTCCTTGTTGAAAAAGAGAGATCTTACATCAAGTCTGAAGCTGTATTAAAGATCATGGAATACATAAATTTACCATTCCCACAGATGGCATTCTTCCTGAAACTTTTACCTTTGCTCGTTCGTGATTTTGCATACGACAATTTAGCAAACAACCGTTACAACATTTTTGGTAAGTCAGAGTCGTGCGAGATTTATTTAGATCAGTGAATGTCATCAATTTCTTCCTTGAGAATTTCGTACATCTAATCCTGATACAT

Coding sequence (CDS)

ATGATAGGGAAAATCAGATATGAAGCTCTACAAAGTGAAGCAGGAAAGAATTTGTTAAGGAGATCAGGAAGAGCTCCTGATGATATATCAAGTGTTGTCCTTGTTGAAAAAGAGAGATCTTACATCAAGTCTGAAGCTGTATTAAAGATCATGGAATACATAAATTTACCATTCCCACAGATGGCATTCTTCCTGAAACTTTTACCTTTGCTCGTTCGTGATTTTGCATACGACAATTTAGCAAACAACCGTTACAACATTTTTGGTAAGTCAGAGTCGTGCGAGATTTATTTAGATCAGTGA

Protein sequence

MIGKIRYEALQSEAGKNLLRRSGRAPDDISSVVLVEKERSYIKSEAVLKIMEYINLPFPQMAFFLKLLPLLVRDFAYDNLANNRYNIFGKSESCEIYLDQ

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo03302	Spo03302	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo03302.1	Spo03302.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03302.1.exon.1	Spo03302.1.exon.1	exon
Spo03302.1.exon.2	Spo03302.1.exon.2	exon
Spo03302.1.exon.3	Spo03302.1.exon.3	exon
Spo03302.1.exon.4	Spo03302.1.exon.4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03302.1.CDS.1	Spo03302.1.CDS.1	CDS
Spo03302.1.CDS.2	Spo03302.1.CDS.2	CDS
Spo03302.1.CDS.3	Spo03302.1.CDS.3	CDS
Spo03302.1.CDS.4	Spo03302.1.CDS.4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03302.1.utr3p.1	Spo03302.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo03302.1 vs. NCBI nr
Match: gi|902228833|gb|KNA21277.1| (hypothetical protein SOVF_044450 [Spinacia oleracea])

HSP 1 Score: 191.8 bits (486), Expect = 5.700e-46
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1


		  
Query: 4   KIRYEALQSEAGKNLLRRSGRAPDDISSVVLVEKERSYIKSEAVLKIMEYINLPFPQMAF 63
           KIRYEALQSEAGKNLLRRSGRAPDDISSVVLVEKERSYIKSEAVLKIMEYINLPFPQMAF
Sbjct: 79  KIRYEALQSEAGKNLLRRSGRAPDDISSVVLVEKERSYIKSEAVLKIMEYINLPFPQMAF 138

Query: 64  FLKLLPLLVRDFAYDNLANNRYNIFGKSESCEIYLDQ 101
           FLKLLPLLVRDFAYDNLANNRYNIFGKSESCEIYLDQ
Sbjct: 139 FLKLLPLLVRDFAYDNLANNRYNIFGKSESCEIYLDQ 175

[Close]

BLAST of Spo03302.1 vs. NCBI nr
Match: gi|731359191|ref|XP_010691152.1| (PREDICTED: DCC family protein At1g52590, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 172.9 bits (437), Expect = 2.700e-40
Identity = 85/95 (89.47%), Postives = 91/95 (95.79%), Query Frame = 1


		  
Query: 5   IRYEALQSEAGKNLLRRSGRAPDDISSVVLVEKERSYIKSEAVLKIMEYINLPFPQMAFF 64
           IRYEALQSEAGK LLRRSGR+PDDISSVVLVEKERSYIKSEAVLKIMEYI+LPFPQ+AFF
Sbjct: 79  IRYEALQSEAGKKLLRRSGRSPDDISSVVLVEKERSYIKSEAVLKIMEYIDLPFPQLAFF 138

Query: 65  LKLLPLLVRDFAYDNLANNRYNIFGKSESCEIYLD 100
           L+ LPL +RDFAYDNLANNRY IFGKSESCEIY+D
Sbjct: 139 LQFLPLFIRDFAYDNLANNRYTIFGKSESCEIYVD 173

[Close]

BLAST of Spo03302.1 vs. NCBI nr
Match: gi|802603672|ref|XP_012073206.1| (PREDICTED: DCC family protein At1g52590, chloroplastic [Jatropha curcas])

HSP 1 Score: 170.2 bits (430), Expect = 1.800e-39
Identity = 82/96 (85.42%), Postives = 91/96 (94.79%), Query Frame = 1


		  
Query: 4   KIRYEALQSEAGKNLLRRSGRAPDDISSVVLVEKERSYIKSEAVLKIMEYINLPFPQMAF 63
           +IRYEALQSEAGK LLRRSGRAPDDISSVVLVEKERSYIKSEAVLKIMEYI+LPFPQ+AF
Sbjct: 83  RIRYEALQSEAGKKLLRRSGRAPDDISSVVLVEKERSYIKSEAVLKIMEYIDLPFPQLAF 142

Query: 64  FLKLLPLLVRDFAYDNLANNRYNIFGKSESCEIYLD 100
           FL+ +PL +RDFAYDN+ANNRY IFG+SESCE+Y D
Sbjct: 143 FLQFVPLFIRDFAYDNVANNRYTIFGRSESCEVYYD 178

[Close]

BLAST of Spo03302.1 vs. NCBI nr
Match: gi|1000969557|ref|XP_015573792.1| (PREDICTED: DCC family protein At1g52590, chloroplastic [Ricinus communis])

HSP 1 Score: 168.3 bits (425), Expect = 6.800e-39
Identity = 82/96 (85.42%), Postives = 90/96 (93.75%), Query Frame = 1


		  
Query: 4   KIRYEALQSEAGKNLLRRSGRAPDDISSVVLVEKERSYIKSEAVLKIMEYINLPFPQMAF 63
           KIRYEALQSEAGK LLRRSGRAPDDISSVVLVEK+RSYIKSEAVLKIMEYI+LPFPQ+AF
Sbjct: 80  KIRYEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSYIKSEAVLKIMEYIDLPFPQLAF 139

Query: 64  FLKLLPLLVRDFAYDNLANNRYNIFGKSESCEIYLD 100
           FL+ +PL +RDF YDN+ANNRY IFG+SESCEIY D
Sbjct: 140 FLQFVPLFIRDFVYDNVANNRYTIFGRSESCEIYND 175

[Close]

BLAST of Spo03302.1 vs. NCBI nr
Match: gi|460380539|ref|XP_004236013.1| (PREDICTED: DCC family protein At1g52590, chloroplastic isoform X2 [Solanum lycopersicum])

HSP 1 Score: 166.8 bits (421), Expect = 2.000e-38
Identity = 80/93 (86.02%), Postives = 90/93 (96.77%), Query Frame = 1


		  
Query: 4   KIRYEALQSEAGKNLLRRSGRAPDDISSVVLVEKERSYIKSEAVLKIMEYINLPFPQMAF 63
           +IRYEALQSEAGKNLLRRSGRAPDDISSVVLVEK+RSY+KSEAVLKIMEYINLPFPQ+AF
Sbjct: 91  RIRYEALQSEAGKNLLRRSGRAPDDISSVVLVEKDRSYVKSEAVLKIMEYINLPFPQLAF 150

Query: 64  FLKLLPLLVRDFAYDNLANNRYNIFGKSESCEI 97
           FL+ +PL +RDFAYDN+ANNRY +FG+SESCEI
Sbjct: 151 FLQFVPLFIRDFAYDNVANNRYALFGRSESCEI 183

[Close]

BLAST of Spo03302.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RR17_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_044450 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 4.000e-46
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1


		  
Query: 4   KIRYEALQSEAGKNLLRRSGRAPDDISSVVLVEKERSYIKSEAVLKIMEYINLPFPQMAF 63
           KIRYEALQSEAGKNLLRRSGRAPDDISSVVLVEKERSYIKSEAVLKIMEYINLPFPQMAF
Sbjct: 79  KIRYEALQSEAGKNLLRRSGRAPDDISSVVLVEKERSYIKSEAVLKIMEYINLPFPQMAF 138

Query: 64  FLKLLPLLVRDFAYDNLANNRYNIFGKSESCEIYLDQ 101
           FLKLLPLLVRDFAYDNLANNRYNIFGKSESCEIYLDQ
Sbjct: 139 FLKLLPLLVRDFAYDNLANNRYNIFGKSESCEIYLDQ 175

[Close]

BLAST of Spo03302.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BH14_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g219690 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.900e-40
Identity = 85/95 (89.47%), Postives = 91/95 (95.79%), Query Frame = 1


		  
Query: 5   IRYEALQSEAGKNLLRRSGRAPDDISSVVLVEKERSYIKSEAVLKIMEYINLPFPQMAFF 64
           IRYEALQSEAGK LLRRSGR+PDDISSVVLVEKERSYIKSEAVLKIMEYI+LPFPQ+AFF
Sbjct: 79  IRYEALQSEAGKKLLRRSGRSPDDISSVVLVEKERSYIKSEAVLKIMEYIDLPFPQLAFF 138

Query: 65  LKLLPLLVRDFAYDNLANNRYNIFGKSESCEIYLD 100
           L+ LPL +RDFAYDNLANNRY IFGKSESCEIY+D
Sbjct: 139 LQFLPLFIRDFAYDNLANNRYTIFGKSESCEIYVD 173

[Close]

BLAST of Spo03302.1 vs. UniProtKB/TrEMBL
Match: E6NUB8_JATCU (JHL06P13.8 protein OS=Jatropha curcas GN=JHL06P13.8 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.200e-39
Identity = 82/96 (85.42%), Postives = 91/96 (94.79%), Query Frame = 1


		  
Query: 4   KIRYEALQSEAGKNLLRRSGRAPDDISSVVLVEKERSYIKSEAVLKIMEYINLPFPQMAF 63
           +IRYEALQSEAGK LLRRSGRAPDDISSVVLVEKERSYIKSEAVLKIMEYI+LPFPQ+AF
Sbjct: 83  RIRYEALQSEAGKKLLRRSGRAPDDISSVVLVEKERSYIKSEAVLKIMEYIDLPFPQLAF 142

Query: 64  FLKLLPLLVRDFAYDNLANNRYNIFGKSESCEIYLD 100
           FL+ +PL +RDFAYDN+ANNRY IFG+SESCE+Y D
Sbjct: 143 FLQFVPLFIRDFAYDNVANNRYTIFGRSESCEVYYD 178

[Close]

BLAST of Spo03302.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HDK9_SOLCH (Putative DCC family protein, chloroplastic-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 4.700e-39
Identity = 80/96 (83.33%), Postives = 92/96 (95.83%), Query Frame = 1


		  
Query: 4   KIRYEALQSEAGKNLLRRSGRAPDDISSVVLVEKERSYIKSEAVLKIMEYINLPFPQMAF 63
           +IRYEALQSEAGKNLLRRSGRAPDDISSVVLVEK+RSY+KSEAVLKIMEYINLPFPQ+AF
Sbjct: 91  RIRYEALQSEAGKNLLRRSGRAPDDISSVVLVEKDRSYVKSEAVLKIMEYINLPFPQLAF 150

Query: 64  FLKLLPLLVRDFAYDNLANNRYNIFGKSESCEIYLD 100
           FL+ +PL +RDFAYDN+ANNRY +FG+SESCEI ++
Sbjct: 151 FLQFVPLFIRDFAYDNVANNRYALFGRSESCEIXME 186

[Close]

BLAST of Spo03302.1 vs. UniProtKB/TrEMBL
Match: K4BLF9_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.400e-38
Identity = 80/93 (86.02%), Postives = 90/93 (96.77%), Query Frame = 1


		  
Query: 4   KIRYEALQSEAGKNLLRRSGRAPDDISSVVLVEKERSYIKSEAVLKIMEYINLPFPQMAF 63
           +IRYEALQSEAGKNLLRRSGRAPDDISSVVLVEK+RSY+KSEAVLKIMEYINLPFPQ+AF
Sbjct: 91  RIRYEALQSEAGKNLLRRSGRAPDDISSVVLVEKDRSYVKSEAVLKIMEYINLPFPQLAF 150

Query: 64  FLKLLPLLVRDFAYDNLANNRYNIFGKSESCEI 97
           FL+ +PL +RDFAYDN+ANNRY +FG+SESCEI
Sbjct: 151 FLQFVPLFIRDFAYDNVANNRYALFGRSESCEI 183

[Close]

BLAST of Spo03302.1 vs. ExPASy Swiss-Prot
Match: Y1259_ARATH (DCC family protein At1g52590, chloroplastic OS=Arabidopsis thaliana GN=At1g52590 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 3.500e-35
Identity = 72/92 (78.26%), Postives = 84/92 (91.30%), Query Frame = 1


		  
Query: 5   IRYEALQSEAGKNLLRRSGRAPDDISSVVLVEKERSYIKSEAVLKIMEYINLPFPQMAFF 64
           IR+EALQSEAGK LL RSGRAPDDISSVVLVE +RSYIKSEAVLKIM+YI+LPFPQ+AFF
Sbjct: 81  IRFEALQSEAGKKLLLRSGRAPDDISSVVLVENDRSYIKSEAVLKIMKYIDLPFPQLAFF 140

Query: 65  LKLLPLLVRDFAYDNLANNRYNIFGKSESCEI 97
           L+  PL VRDF Y+N+ANNRY +FG+S+SCE+
Sbjct: 141 LQFAPLFVRDFLYENVANNRYAMFGRSDSCEL 172

[Close]

BLAST of Spo03302.1 vs. ExPASy Swiss-Prot
Match: YUXK_BACSU (Uncharacterized protein YuxK OS=Bacillus subtilis (strain 168) GN=yuxK PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.000e-10
Identity = 35/92 (38.04%), Postives = 50/92 (54.35%), Query Frame = 1


		  
Query: 3   GKIRYEALQSEAGKNLLRRSGRAPDDISSVVLVEKERSYIKSEAVLKIMEYINLPFPQMA 62
           G I + +LQSE G++LL++SG   D   S V +E  + Y KS A +K+  ++  P+    
Sbjct: 34  GLISFTSLQSETGQSLLKKSGLPTDRFDSFVFIEDGQVYTKSTAAIKVFRHLRGPWRLFV 93

Query: 63  FFLKLLPLLVRDFAYDNLANNRYNIFGKSESC 95
            F   +P  VRD  Y  +A NRY  FGK   C
Sbjct: 94  LFF-AVPKPVRDMVYSFIAKNRYKWFGKKNEC 124

[Close]

BLAST of Spo03302.1 vs. TAIR (Arabidopsis)
Match: AT1G52590.1 (Putative thiol-disulphide oxidoreductase DCC)

HSP 1 Score: 148.7 bits (374), Expect = 2.000e-36
Identity = 72/92 (78.26%), Postives = 84/92 (91.30%), Query Frame = 1


		  
Query: 5   IRYEALQSEAGKNLLRRSGRAPDDISSVVLVEKERSYIKSEAVLKIMEYINLPFPQMAFF 64
           IR+EALQSEAGK LL RSGRAPDDISSVVLVE +RSYIKSEAVLKIM+YI+LPFPQ+AFF
Sbjct: 81  IRFEALQSEAGKKLLLRSGRAPDDISSVVLVENDRSYIKSEAVLKIMKYIDLPFPQLAFF 140

Query: 65  LKLLPLLVRDFAYDNLANNRYNIFGKSESCEI 97
           L+  PL VRDF Y+N+ANNRY +FG+S+SCE+
Sbjct: 141 LQFAPLFVRDFLYENVANNRYAMFGRSDSCEL 172

[Close]

BLAST of Spo03302.1 vs. TAIR (Arabidopsis)
Match: AT1G24095.1 (Putative thiol-disulphide oxidoreductase DCC)

HSP 1 Score: 56.2 bits (134), Expect = 1.300e-8
Identity = 33/99 (33.33%), Postives = 55/99 (55.56%), Query Frame = 1


		  
Query: 4   KIRYEALQSEAGKNLLRRSGRAPDDISSVVLVEKERSYIK--SEAVLKIMEYINLPFPQM 63
           KI++  LQS+A +  L  SG   +D+    L  +   +    S A L+++ Y+ LP+  +
Sbjct: 100 KIKFCCLQSKAAEPYLEVSGVTREDVQKRFLFIEGLGFYHQASTAALRVVSYLPLPYSAL 159

Query: 64  AFFLKLLPLLVRDFAYDNLANNRYNIFGKSESCEIYLDQ 101
             F  ++P  +RD  YD +A NRY+ FGK+E C +  D+
Sbjct: 160 NAF-SIVPTPLRDSVYDYVAKNRYDWFGKAEDCLVLNDK 197

The following BLAST results are available for this feature:

BLAST of Spo03302.1 vs. NCBI nr
BLAST of Spo03302.1 vs. UniProtKB/TrEMBL
BLAST of Spo03302.1 vs. ExPASy Swiss-Prot
BLAST of Spo03302.1 vs. TAIR (Arabidopsis)

BLAST of Spo03302.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902228833\|gb\|KNA21277.1\|	5.7e-46	100.	hypothetical protein SOVF_0444...	[more]
gi\|731359191\|ref\|XP_010691152.1\|	2.7e-40	89.4	PREDICTED: DCC family protein ...	[more]
gi\|802603672\|ref\|XP_012073206.1\|	1.8e-39	85.4	PREDICTED: DCC family protein ...	[more]
gi\|1000969557\|ref\|XP_015573792.1\|	6.8e-39	85.4	PREDICTED: DCC family protein ...	[more]
gi\|460380539\|ref\|XP_004236013.1\|	2.0e-38	86.0	PREDICTED: DCC family protein ...	[more]

BLAST of Spo03302.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RR17_SPIOL	4.0e-46	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BH14_BETVU	1.9e-40	89.4	Uncharacterized protein OS=Bet...	[more]
E6NUB8_JATCU	1.2e-39	85.4	JHL06P13.8 protein OS=Jatropha...	[more]
A0A0V0HDK9_SOLCH	4.7e-39	83.3	Putative DCC family protein, c...	[more]
K4BLF9_SOLLC	1.4e-38	86.0	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo03302.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2


Match Name	E-value	Identity	Description
Y1259_ARATH	3.5e-35	78.2	DCC family protein At1g52590, ...	[more]
YUXK_BACSU	3.0e-10	38.0	Uncharacterized protein YuxK O...	[more]

BLAST of Spo03302.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G52590.1	2.0e-36	78.2	Putative thiol-disulphide oxid...	[more]
AT1G24095.1	1.3e-8	33.3	Putative thiol-disulphide oxid...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007263	Protein of unknown function DUF393	PFAM	PF04134	DUF393	coord: 3..90 score: 5.4
None	No IPR available	PANTHER	PTHR33639	FAMILY NOT NAMED	coord: 3..100 score: 4.2
None	No IPR available	PANTHER	PTHR33639:SF2	SUBFAMILY NOT NAMED	coord: 3..100 score: 4.2

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0010287	plastoglobule